B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 2 - 74 | 8.2e-07 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 125 |
| AcsI | RAATTY | 2 cut(s) | 5, 190 |
| AcuI | CTGAAG | 1 cut(s) | 425 |
| AgsI | TTSAA | 5 cut(s) | 195, 299, 399, 460, 481 |
| AjiI | CACGTC | 1 cut(s) | 205 |
| AluBI | AGCT | 3 cut(s) | 393, 431, 437 |
| AluI | AGCT | 3 cut(s) | 393, 431, 437 |
| AoxI | GGCC | 1 cut(s) | 125 |
| ApeKI | GCWGC | 1 cut(s) | 493 |
| ApoI | RAATTY | 2 cut(s) | 5, 190 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| BbsI | GAAGAC | 1 cut(s) | 199 |
| BbvI | GCAGC | 1 cut(s) | 505 |
| BfmI | CTRYAG | 1 cut(s) | 432 |
| BisI | GCNGC | 1 cut(s) | 494 |
| BlsI | GCNGC | 1 cut(s) | 495 |
| BmgBI | CACGTC | 1 cut(s) | 205 |
| BmsI | GCATC | 2 cut(s) | 393, 415 |
| BpiI | GAAGAC | 1 cut(s) | 199 |
| BsaBI | GATNNNNATC | 1 cut(s) | 349 |
| Bse1I | ACTGG | 1 cut(s) | 41 |
| Bse8I | GATNNNNATC | 1 cut(s) | 349 |
| BseGI | GGATG | 3 cut(s) | 313, 406, 408 |
| BseJI | GATNNNNATC | 1 cut(s) | 349 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 1 cut(s) | 41 |
| BseXI | GCAGC | 1 cut(s) | 505 |
| BshFI | GGCC | 1 cut(s) | 127 |
| BsiSI | CCGG | 2 cut(s) | 128, 257 |
| BsnI | GGCC | 1 cut(s) | 127 |
| BspANI | GGCC | 1 cut(s) | 127 |
| BspCNI | CTCAG | 1 cut(s) | 78 |
| BspQI | GCTCTTC | 1 cut(s) | 444 |
| BsrI | ACTGG | 1 cut(s) | 41 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 444 |
| BstDEI | CTNAG | 2 cut(s) | 50, 86 |
| BstF5I | GGATG | 3 cut(s) | 313, 406, 408 |
| BstSFI | CTRYAG | 1 cut(s) | 432 |
| BstV1I | GCAGC | 1 cut(s) | 505 |
| BstV2I | GAAGAC | 1 cut(s) | 199 |
| BsuRI | GGCC | 1 cut(s) | 127 |
| BtrI | CACGTC | 1 cut(s) | 205 |
| BtsCI | GGATG | 3 cut(s) | 313, 406, 408 |
| CviAII | CATG | 3 cut(s) | 60, 360, 490 |
| CviJI | RGCY | 8 cut(s) | 127, 169, 324, 393, 431, 437, 472, 496 |
| CviKI_1 | RGCY | 8 cut(s) | 127, 169, 324, 393, 431, 437, 472, 496 |
| DdeI | CTNAG | 2 cut(s) | 50, 86 |
| EaeI | YGGCCR | 1 cut(s) | 125 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 444 |
| EarI | CTCTTC | 2 cut(s) | 21, 444 |
| Eco57I | CTGAAG | 1 cut(s) | 425 |
| EcoRI | GAATTC | 1 cut(s) | 190 |
| EcoT22I | ATGCAT | 1 cut(s) | 408 |
| FaeI | CATG | 3 cut(s) | 63, 363, 493 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 461, 493 |
| FatI | CATG | 3 cut(s) | 59, 359, 489 |
| Fnu4HI | GCNGC | 1 cut(s) | 494 |
| FokI | GGATG | 3 cut(s) | 320, 393, 415 |
| Fsp4HI | GCNGC | 1 cut(s) | 494 |
| GluI | GCNGC | 1 cut(s) | 494 |
| HaeIII | GGCC | 1 cut(s) | 127 |
| HapII | CCGG | 2 cut(s) | 128, 257 |
| Hin1II | CATG | 3 cut(s) | 63, 363, 493 |
| HincII | GTYRAC | 1 cut(s) | 238 |
| HindII | GTYRAC | 1 cut(s) | 238 |
| HinfI | GANTC | 2 cut(s) | 198, 290 |
| HpaII | CCGG | 2 cut(s) | 128, 257 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy166II | GTNNAC | 1 cut(s) | 238 |
| Hpy188I | TCNGA | 4 cut(s) | 70, 375, 444, 466 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 195 |
| Hpy8I | GTNNAC | 1 cut(s) | 238 |
| HpyAV | CCTTC | 2 cut(s) | 112, 179 |
| HpyCH4IV | ACGT | 1 cut(s) | 204 |
| HpyCH4V | TGCA | 4 cut(s) | 228, 406, 493, 533 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 86 |
| HpySE526I | ACGT | 1 cut(s) | 204 |
| Hsp92II | CATG | 3 cut(s) | 63, 363, 493 |
| LguI | GCTCTTC | 1 cut(s) | 444 |
| LpnPI | CCDG | 3 cut(s) | 54, 141, 270 |
| Lsp1109I | GCAGC | 1 cut(s) | 505 |
| LweI | GCATC | 2 cut(s) | 393, 415 |
| MaeII | ACGT | 1 cut(s) | 204 |
| MboII | GAAGA | 8 cut(s) | 38, 102, 199, 293, 339, 342, 388, 431 |
| MfeI | CAATTG | 1 cut(s) | 450 |
| MluCI | AATT | 5 cut(s) | 5, 190, 251, 450, 514 |
| MlyI | GAGTC | 1 cut(s) | 299 |
| MnlI | CCTC | 4 cut(s) | 97, 381, 483, 508 |
| Mph1103I | ATGCAT | 1 cut(s) | 408 |
| MspI | CCGG | 2 cut(s) | 128, 257 |
| MunI | CAATTG | 1 cut(s) | 450 |
| NlaIII | CATG | 3 cut(s) | 63, 363, 493 |
| NsiI | ATGCAT | 1 cut(s) | 408 |
| PciSI | GCTCTTC | 1 cut(s) | 444 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 285 |
| PfeI | GAWTC | 1 cut(s) | 198 |
| PkrI | GCNGC | 1 cut(s) | 495 |
| PleI | GAGTC | 1 cut(s) | 298 |
| PpsI | GAGTC | 1 cut(s) | 298 |
| SapI | GCTCTTC | 1 cut(s) | 444 |
| SatI | GCNGC | 1 cut(s) | 494 |
| SchI | GAGTC | 1 cut(s) | 299 |
| SetI | ASST | 5 cut(s) | 108, 207, 395, 433, 439 |
| SfaNI | GCATC | 2 cut(s) | 393, 415 |
| SfcI | CTRYAG | 1 cut(s) | 432 |
| Sse9I | AATT | 5 cut(s) | 5, 190, 251, 450, 514 |
| TaiI | ACGT | 1 cut(s) | 207 |
| TaqI | TCGA | 1 cut(s) | 216 |
| TasI | AATT | 5 cut(s) | 5, 190, 251, 450, 514 |
| TfiI | GAWTC | 1 cut(s) | 198 |
| TseI | GCWGC | 1 cut(s) | 493 |
| TspDTI | ATGAA | 5 cut(s) | 17, 29, 198, 199, 339 |
| XapI | RAATTY | 2 cut(s) | 5, 190 |
| Zsp2I | ATGCAT | 1 cut(s) | 408 |