Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0000156

Physical Location & Seq

Genomic Coordinates Reverse (-)

9239668 .. 9242491

Gene Structure 2824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g12630.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGAAGAAACTGATGGAGATGATGATGAATCTGTGGAGATCCTGGAGGACTTTCCGCCGTGCCCAAAAACAAGGCAGAAATCTCCATTGCCGTCTCCTCTTCCTCGCAAGAGAAAGAGAATAAGTACTTCTATTGGTTCTACAAGTAAAAAATTAGAGACCAGAAGCACTTTATGGATGAAACCATTGACTGAAAATGAGAAAGCTATTGCCCTTCAGAGAGCCATCGATTTCAAATCCGAAAACCCTCACTTCAAGGTTGCCATGCAGCCTTCCTACATACTCAACCGATTGATTTTGCCTTCTGAGTTTGCCAAGAAGTATCTTACGCAGCATCCAACTGGTAGTGCCATCCTTCGAGTTCCGGATGGAAGAACTTGGAGTGTTAAATTCAAATATGATAACAAAAGAGCGCGATTCCTGCTTGGTTGGCTGGCATTCGTAGAAGACAATAATCTGAAAATCGGCGATGTGTGTGTATTTATGTTGATTAAGGGCTTTAAAATTACATTTGAAGTTGCCTTTTACCGCAGTAAAGAAGCTGCAATTTGTTCCATTTCTTCTGCTGCAAAGGAATGTAGTGGGGGCCTGCGAACCGCTCAGAGAGACCAGGAACCATTCACAATCTCTGAAAGATCAAGAGCTTATAAAAGCTACACATCTCTGGACGAACCTGATTATGAAGGTGAAGACGAGGACTCTGTCGGAATCTCGGATTTTCAACGGTGCACGAGAAAAACGACGGAGAAATCACCATTACCCTCTCCTCAACCACTCAAGAAAATCAGAACAAGTAATAAGGCAGCAAAAAAACGCAACATCAACTTTAGGCCAACAAAGATTGAACCTCGCTCAAAATCTGCAGTCAAAAGGGAAGATGAATCAGATGATGATTCTGTTGTATCCTTGGACAAATCTGCCTCCTGCCCGAAAAATATCGAAAAATCTCTTTTGGCATCAACTACAAGTGGAAAAGCTATGGCTCTTGAGAGAGCCATTGCTTTCTGTTCCAAATCTGTAAACCCTTCGTTTTGGATTGTCATGCAACCGTCGTATGTCACTCAAAGTTACTTGCATTTACGATCAGAGTTTACCAATAGACATCTTAATATGAAGTCTGCTGGTCGTAATGCCATCCTTCAGGGTCCGAATGGAGGAACTTGGTCTGTTAAACTCAAATGTGAAAACTCGAAAGGCAGGTTCCTGCAAGGTTGGCAAGCATTTGTAACGGACAATAATTTGGAAGTGGATGATGTTTGTGTTTTCACCTTGATGAAGGACGTTAAACTTTCTTTCGAAGTTTTTTTGTTCCGCGCTGCAGAAGCTGCAAATTGCCGCATGTCTCCAACTGGGCCTTCCGATACATCTTTGAGCGCCGTTGAAGCTGCCAACAAGTTCGTTTCAAGCAATCCATTCTTCAGAGTCACCCATGGTCTGGGGTCATCCCGTGTGTTGCGTATTCCAACTAGTTTTTCCAAGAACTTCATTGAAAAGAAGAAACAAATTGTGAAACTTTGGGTTGACGATAGAATGTGGCATGTGAGCTTGACTGTTCATTGGCGTAAGGCACTTAAATTATCTGCTGGCTGGGCCGCATTTGCTAAGGGAAATTGTTTGACAGAAGGAGATGTTTGCATATTTGAACTTCTCGACAGAAATAATATCTCACTGAAAGTCTACATATTTAGATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

565

Amino Acids

63.71

Weight (kDa)

9.44

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca	FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica	MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica	Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis	pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis	RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata	RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora	Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa	Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha	Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana	Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	648
Acc36I	ACCTGC	1 cut(s)	1188
AccB7I	CCANNNNNTGG	1 cut(s)	1435
AccBSI	CCGCTC	1 cut(s)	599
AccI	GTMKAC	1 cut(s)	1677
AccII	CGCG	2 cut(s)	415, 1314
AccIII	TCCGGA	1 cut(s)	364
AciI	CCGC	6 cut(s)	56, 529, 597, 1312, 1336, 1593
AclWI	GGATC	1 cut(s)	34
AcsI	RAATTY	1 cut(s)	389
AcuI	CTGAAG	3 cut(s)	200, 1124, 1402
AfaI	GTAC	1 cut(s)	127
AfiI	CCNNNNNNNGG	2 cut(s)	1154, 1435
AhlI	ACTAGT	1 cut(s)	1466
AjnI	CCWGG	2 cut(s)	42, 609
AjuI	GAANNNNNNNTTGG	4 cut(s)	1339, 1371, 1456, 1488
AluBI	AGCT	8 cut(s)	206, 542, 644, 654, 977, 1325, 1385, 1545
AluI	AGCT	8 cut(s)	206, 542, 644, 654, 977, 1325, 1385, 1545
Alw21I	GWGCWC	1 cut(s)	731
Alw26I	GTCTC	4 cut(s)	99, 152, 600, 1347
Alw44I	GTGCAC	1 cut(s)	727
AlwI	GGATC	1 cut(s)	34
AlwNI	CAGNNNCTG	1 cut(s)	1325
Aor13HI	TCCGGA	1 cut(s)	364
AoxI	GGCC	4 cut(s)	586, 830, 1352, 1590
ApaLI	GTGCAC	1 cut(s)	727
ApeKI	GCWGC	8 cut(s)	268, 331, 542, 566, 803, 1316, 1325, 1385
ApoI	RAATTY	1 cut(s)	389
AspLEI	GCGC	3 cut(s)	415, 1316, 1376
AspS9I	GGNCC	4 cut(s)	586, 1145, 1352, 1590
AsuHPI	GGTGA	4 cut(s)	698, 744, 1258, 1417
AsuII	TTCGAA	1 cut(s)	1296
AvaII	GGWCC	1 cut(s)	1145
BaeGI	GKGCMC	2 cut(s)	65, 731
BauI	CACGAG	1 cut(s)	730
BbsI	GAAGAC	2 cut(s)	453, 696
Bbv12I	GWGCWC	1 cut(s)	731
BbvI	GCAGC	8 cut(s)	280, 343, 529, 553, 815, 1303, 1312, 1372
BccI	CCATC	5 cut(s)	8, 233, 359, 362, 1142
BceAI	ACGGC	3 cut(s)	43, 76, 1361
BciT130I	CCWGG	2 cut(s)	44, 611
BciVI	GTATCC	1 cut(s)	913
BcoDI	GTCTC	4 cut(s)	99, 152, 600, 1347
BcuI	ACTAGT	1 cut(s)	1466
BfaI	CTAG	1 cut(s)	1467
BfmI	CTRYAG	2 cut(s)	861, 1317
BfoI	RGCGCY	1 cut(s)	1377
BfuAI	ACCTGC	1 cut(s)	1188
BfuI	GTATCC	1 cut(s)	913
BmcAI	AGTACT	1 cut(s)	127
Bme1390I	CCNGG	2 cut(s)	44, 611
Bme18I	GGWCC	1 cut(s)	1145
BmgT120I	GGNCC	4 cut(s)	586, 1145, 1352, 1590
BmiI	GGNNCC	4 cut(s)	587, 615, 1146, 1202
BmrFI	CCNGG	2 cut(s)	44, 611
BmrI	ACTGGG	1 cut(s)	1359
BmsI	GCATC	2 cut(s)	343, 965
BmuI	ACTGGG	1 cut(s)	1359
BpiI	GAAGAC	2 cut(s)	453, 696
BpmI	CTGGAG	1 cut(s)	65
Bpu10I	CCTNAGC	1 cut(s)	1602
Bpu14I	TTCGAA	1 cut(s)	1296
BpuEI	CTTGAG	2 cut(s)	761, 1007
Bsa29I	ATCGAT	1 cut(s)	228
BsaI	GGTCTC	2 cut(s)	152, 600
BsaJI	CCNNGG	2 cut(s)	906, 1429
BsaWI	WCCGGW	1 cut(s)	364
Bsc4I	CCNNNNNNNGG	2 cut(s)	1154, 1435
Bse1I	ACTGG	2 cut(s)	346, 1354
Bse3DI	GCAATG	2 cut(s)	86, 996
BseAI	TCCGGA	1 cut(s)	364
BseBI	CCWGG	2 cut(s)	44, 611
BseCI	ATCGAT	1 cut(s)	228
BseDI	CCNNGG	2 cut(s)	906, 1429
BseGI	GGATG	7 cut(s)	183, 334, 351, 373, 1134, 1255, 1442
BseLI	CCNNNNNNNGG	2 cut(s)	1154, 1435
BseMI	GCAATG	2 cut(s)	86, 996
BseMII	CTCAG	2 cut(s)	297, 614
BseNI	ACTGG	2 cut(s)	346, 1354
BseRI	GAGGAG	2 cut(s)	87, 756
BseSI	GKGCMC	2 cut(s)	65, 731
BseXI	GCAGC	8 cut(s)	280, 343, 529, 553, 815, 1303, 1312, 1372
BseYI	CCCAGC	1 cut(s)	1587
Bsh1236I	CGCG	2 cut(s)	415, 1314
BshFI	GGCC	4 cut(s)	588, 832, 1354, 1592
BshVI	ATCGAT	1 cut(s)	228
BsiHKAI	GWGCWC	1 cut(s)	731
BsiSI	CCGG	1 cut(s)	365
BslI	CCNNNNNNNGG	2 cut(s)	1154, 1435
BsmAI	GTCTC	4 cut(s)	99, 152, 600, 1347
BsmBI	CGTCTC	1 cut(s)	99
BsmI	GAATGC	1 cut(s)	437
BsnI	GGCC	4 cut(s)	588, 832, 1354, 1592
Bso31I	GGTCTC	2 cut(s)	152, 600
Bsp119I	TTCGAA	1 cut(s)	1296
Bsp1286I	GDGCHC	2 cut(s)	65, 731
Bsp13I	TCCGGA	1 cut(s)	364
Bsp143I	GATC	3 cut(s)	39, 635, 1082
Bsp19I	CCATGG	1 cut(s)	1429
BspACI	CCGC	6 cut(s)	56, 529, 597, 1312, 1336, 1593
BspANI	GGCC	4 cut(s)	588, 832, 1354, 1592
BspCNI	CTCAG	2 cut(s)	298, 613
BspDI	ATCGAT	1 cut(s)	228
BspEI	TCCGGA	1 cut(s)	364
BspFNI	CGCG	2 cut(s)	415, 1314
BspLI	GGNNCC	4 cut(s)	587, 615, 1146, 1202
BspMAI	CTGCAG	2 cut(s)	865, 1321
BspMI	ACCTGC	1 cut(s)	1188
BspPI	GGATC	1 cut(s)	34
BspT104I	TTCGAA	1 cut(s)	1296
BspTNI	GGTCTC	2 cut(s)	152, 600
BsrBI	CCGCTC	1 cut(s)	599
BsrDI	GCAATG	2 cut(s)	86, 996
BsrI	ACTGG	2 cut(s)	346, 1354
BssECI	CCNNGG	2 cut(s)	906, 1429
BssMI	GATC	3 cut(s)	39, 635, 1082
BssSI	CACGAG	1 cut(s)	730
BssT1I	CCWWGG	2 cut(s)	906, 1429
Bst2BI	CACGAG	1 cut(s)	730
Bst2UI	CCWGG	2 cut(s)	44, 611
Bst4CI	ACNGT	3 cut(s)	726, 1050, 1552
Bst6I	CTCTTC	1 cut(s)	105
BstAPI	GCANNNNNTGC	1 cut(s)	1325
BstBI	TTCGAA	1 cut(s)	1296
BstC8I	GCNNGC	4 cut(s)	435, 590, 1218, 1585
BstDEI	CTNAG	3 cut(s)	306, 600, 1602
BstDSI	CCRYGG	1 cut(s)	1429
BstF5I	GGATG	7 cut(s)	183, 334, 351, 373, 1134, 1255, 1442
BstFNI	CGCG	2 cut(s)	415, 1314
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	3 cut(s)	415, 1316, 1376
BstKTI	GATC	3 cut(s)	42, 638, 1085
BstMAI	GTCTC	4 cut(s)	99, 152, 600, 1347
BstMBI	GATC	3 cut(s)	39, 635, 1082
BstMWI	GCNNNNNNNGC	8 cut(s)	421, 430, 1213, 1322, 1325, 1382, 1589, 1598
BstNI	CCWGG	2 cut(s)	44, 611
BstNSI	RCATGY	2 cut(s)	1342, 1541
BstSCI	CCNGG	2 cut(s)	42, 609
BstSFI	CTRYAG	2 cut(s)	861, 1317
BstSLI	GKGCMC	2 cut(s)	65, 731
BstUI	CGCG	2 cut(s)	415, 1314
BstV1I	GCAGC	8 cut(s)	280, 343, 529, 553, 815, 1303, 1312, 1372
BstV2I	GAAGAC	2 cut(s)	453, 696
BstX2I	RGATCY	1 cut(s)	39
BstYI	RGATCY	1 cut(s)	39
Bsu15I	ATCGAT	1 cut(s)	228
BsuI	GTATCC	1 cut(s)	913
BsuRI	GGCC	4 cut(s)	588, 832, 1354, 1592
BsuTUI	ATCGAT	1 cut(s)	228
BtgI	CCRYGG	1 cut(s)	1429
BtgZI	GCGATG	1 cut(s)	483
BtsCI	GGATG	7 cut(s)	183, 334, 351, 373, 1134, 1255, 1442
BtsIMutI	CAGTG	1 cut(s)	1667
BveI	ACCTGC	1 cut(s)	1188
Cac8I	GCNNGC	4 cut(s)	435, 590, 1218, 1585
CaiI	CAGNNNCTG	1 cut(s)	1325
CfoI	GCGC	3 cut(s)	415, 1316, 1376
Cfr13I	GGNCC	4 cut(s)	586, 1145, 1352, 1590
ClaI	ATCGAT	1 cut(s)	228
Csp6I	GTAC	1 cut(s)	126
CviAII	CATG	5 cut(s)	265, 1042, 1339, 1430, 1538
CviQI	GTAC	1 cut(s)	126
DdeI	CTNAG	3 cut(s)	306, 600, 1602
DpnI	GATC	3 cut(s)	41, 637, 1084
DpnII	GATC	3 cut(s)	39, 635, 1082
DraI	TTTAAA	1 cut(s)	502
Eam1104I	CTCTTC	1 cut(s)	105
EarI	CTCTTC	1 cut(s)	105
EciI	GGCGGA	1 cut(s)	45
Eco130I	CCWWGG	2 cut(s)	906, 1429
Eco31I	GGTCTC	2 cut(s)	152, 600
Eco47I	GGWCC	1 cut(s)	1145
Eco57I	CTGAAG	3 cut(s)	200, 1124, 1402
EcoO109I	RGGNCCY	1 cut(s)	586
EcoRII	CCWGG	2 cut(s)	42, 609
EcoT14I	CCWWGG	2 cut(s)	906, 1429
ErhI	CCWWGG	2 cut(s)	906, 1429
Esp3I	CGTCTC	1 cut(s)	99
FaeI	CATG	5 cut(s)	268, 1045, 1342, 1433, 1541
FatI	CATG	5 cut(s)	264, 1041, 1338, 1429, 1537
FblI	GTMKAC	1 cut(s)	1677
FokI	GGATG	7 cut(s)	190, 321, 338, 380, 1121, 1262, 1429
FspBI	CTAG	1 cut(s)	1467
GlaI	GCGC	3 cut(s)	414, 1315, 1375
GsaI	CCCAGC	1 cut(s)	1591
GsuI	CTGGAG	1 cut(s)	65
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	4 cut(s)	588, 832, 1354, 1592
HapII	CCGG	1 cut(s)	365
HhaI	GCGC	3 cut(s)	415, 1316, 1376
Hin1II	CATG	5 cut(s)	268, 1045, 1342, 1433, 1541
Hin6I	GCGC	3 cut(s)	413, 1314, 1374
HinP1I	GCGC	3 cut(s)	413, 1314, 1374
HincII	GTYRAC	1 cut(s)	1522
HindII	GTYRAC	1 cut(s)	1522
HinfI	GANTC	7 cut(s)	29, 417, 698, 708, 881, 893, 1422
HpaII	CCGG	1 cut(s)	365
HphI	GGTGA	4 cut(s)	698, 744, 1258, 1417
Hpy166II	GTNNAC	5 cut(s)	729, 1021, 1092, 1522, 1678
Hpy188III	TCNNGA	6 cut(s)	365, 639, 665, 778, 986, 1649
Hpy8I	GTNNAC	5 cut(s)	729, 1021, 1092, 1522, 1678
Hpy99I	CGWCG	2 cut(s)	745, 1054
HpyCH4III	ACNGT	3 cut(s)	726, 1050, 1552
HpyCH4IV	ACGT	1 cut(s)	1281
HpyF10VI	GCNNNNNNNGC	8 cut(s)	421, 430, 1213, 1322, 1325, 1382, 1589, 1598
HpyF3I	CTNAG	3 cut(s)	306, 600, 1602
HpySE526I	ACGT	1 cut(s)	1281
Hsp92II	CATG	5 cut(s)	268, 1045, 1342, 1433, 1541
HspAI	GCGC	3 cut(s)	413, 1314, 1374
Kpn2I	TCCGGA	1 cut(s)	364
Kzo9I	GATC	3 cut(s)	39, 635, 1082
Lsp1109I	GCAGC	8 cut(s)	280, 343, 529, 553, 815, 1303, 1312, 1372
LweI	GCATC	2 cut(s)	343, 965
MaeI	CTAG	1 cut(s)	1467
MaeII	ACGT	1 cut(s)	1281
MaeIII	GTNAC	4 cut(s)	1057, 1067, 1225, 1423
MalI	GATC	3 cut(s)	41, 637, 1084
MbiI	CCGCTC	1 cut(s)	599
MboI	GATC	3 cut(s)	39, 635, 1082
MboII	GAAGA	9 cut(s)	17, 92, 384, 458, 552, 701, 887, 1408, 1507
MflI	RGATCY	1 cut(s)	39
MhlI	GDGCHC	2 cut(s)	65, 731
MluCI	AATT	9 cut(s)	152, 389, 504, 546, 1237, 1330, 1503, 1574, 1609
MlyI	GAGTC	2 cut(s)	692, 1431
MmeI	TCCRAC	4 cut(s)	362, 685, 1370, 1487
MroI	TCCGGA	1 cut(s)	364
MseI	TTAA	7 cut(s)	387, 492, 501, 1107, 1170, 1284, 1572
MslI	CAYNNNNRTG	1 cut(s)	1271
MspI	CCGG	1 cut(s)	365
MspR9I	CCNGG	2 cut(s)	44, 611
Mva1269I	GAATGC	1 cut(s)	437
MvaI	CCWGG	2 cut(s)	44, 611
MvnI	CGCG	2 cut(s)	415, 1314
MwoI	GCNNNNNNNGC	8 cut(s)	421, 430, 1213, 1322, 1325, 1382, 1589, 1598
NcoI	CCATGG	1 cut(s)	1429
NdeII	GATC	3 cut(s)	39, 635, 1082
NlaIII	CATG	5 cut(s)	268, 1045, 1342, 1433, 1541
NlaIV	GGNNCC	4 cut(s)	587, 615, 1146, 1202
NmuCI	GTSAC	2 cut(s)	1057, 1423
NspI	RCATGY	2 cut(s)	1342, 1541
NspV	TTCGAA	1 cut(s)	1296
PcsI	WCGNNNNNNNCGW	1 cut(s)	737
PctI	GAATGC	1 cut(s)	437
PfeI	GAWTC	5 cut(s)	29, 417, 708, 881, 893
PflFI	GACNNNGTC	1 cut(s)	701
PflMI	CCANNNNNTGG	1 cut(s)	1435
PfoI	TCCNGGA	1 cut(s)	42
PleI	GAGTC	2 cut(s)	692, 1430
PpsI	GAGTC	2 cut(s)	692, 1430
PsiI	TTATAA	1 cut(s)	648
Psp6I	CCWGG	2 cut(s)	42, 609
PspFI	CCCAGC	1 cut(s)	1587
PspGI	CCWGG	2 cut(s)	42, 609
PspN4I	GGNNCC	4 cut(s)	587, 615, 1146, 1202
PspPI	GGNCC	4 cut(s)	586, 1145, 1352, 1590
PstI	CTGCAG	2 cut(s)	865, 1321
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	1 cut(s)	39
PsyI	GACNNNGTC	1 cut(s)	701
RsaI	GTAC	1 cut(s)	127
RsaNI	GTAC	1 cut(s)	126
RseI	CAYNNNNRTG	1 cut(s)	1271
SaqAI	TTAA	7 cut(s)	387, 492, 501, 1107, 1170, 1284, 1572
Sau3AI	GATC	3 cut(s)	39, 635, 1082
Sau96I	GGNCC	4 cut(s)	586, 1145, 1352, 1590
ScaI	AGTACT	1 cut(s)	127
SchI	GAGTC	2 cut(s)	692, 1431
ScrFI	CCNGG	2 cut(s)	44, 611
SduI	GDGCHC	2 cut(s)	65, 731
SfaNI	GCATC	2 cut(s)	343, 965
SfcI	CTRYAG	2 cut(s)	861, 1317
SfuI	TTCGAA	1 cut(s)	1296
SinI	GGWCC	1 cut(s)	1145
SmiMI	CAYNNNNRTG	1 cut(s)	1271
SmlI	CTYRAG	2 cut(s)	776, 986
SmoI	CTYRAG	2 cut(s)	776, 986
SpeI	ACTAGT	1 cut(s)	1466
Sse9I	AATT	9 cut(s)	152, 389, 504, 546, 1237, 1330, 1503, 1574, 1609
SsiI	CCGC	6 cut(s)	56, 529, 597, 1312, 1336, 1593
SspMI	CTAG	1 cut(s)	1467
StyD4I	CCNGG	2 cut(s)	42, 609
StyI	CCWWGG	2 cut(s)	906, 1429
TaaI	ACNGT	3 cut(s)	726, 1050, 1552
TaiI	ACGT	1 cut(s)	1284
TaqI	TCGA	6 cut(s)	228, 358, 939, 1190, 1296, 1650
TasI	AATT	9 cut(s)	152, 389, 504, 546, 1237, 1330, 1503, 1574, 1609
TatI	WGTACW	1 cut(s)	125
TauI	GCSGC	2 cut(s)	1338, 1595
TfiI	GAWTC	5 cut(s)	29, 417, 708, 881, 893
Tru1I	TTAA	7 cut(s)	387, 492, 501, 1107, 1170, 1284, 1572
Tru9I	TTAA	7 cut(s)	387, 492, 501, 1107, 1170, 1284, 1572
TscAI	CASTG	1 cut(s)	1674
TseFI	GTSAC	2 cut(s)	1057, 1423
TseI	GCWGC	8 cut(s)	268, 331, 542, 566, 803, 1316, 1325, 1385
Tsp45I	GTSAC	2 cut(s)	1057, 1423
TspDTI	ATGAA	8 cut(s)	42, 194, 696, 894, 1127, 1289, 1474, 1544
TspGWI	ACGGA	2 cut(s)	758, 1244
TspRI	CASTG	1 cut(s)	1674
Tth111I	GACNNNGTC	1 cut(s)	701
Van91I	CCANNNNNTGG	1 cut(s)	1435
VneI	GTGCAC	1 cut(s)	727
VpaK11BI	GGWCC	1 cut(s)	1145
XapI	RAATTY	1 cut(s)	389
XceI	RCATGY	2 cut(s)	1342, 1541
XmiI	GTMKAC	1 cut(s)	1677
XspI	CTAG	1 cut(s)	1467
ZrmI	AGTACT	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.