FvH4_1g29250

B3 domain-containing transcription factor VRN1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000156
Physical Location & Seq
Reverse (-)
22056093 .. 22058248
2156 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29250.t1

Sequence Viewer

Length: 1488 bp
ATGTTAATGTTAGAAGAAAAACTCATAATCAAGGTCGGACGTGCTTGTTTTGTACAGAGTATTCCAAAGAAATTTGTCATGAAATATGGACAAGATATATCAAATTCAGCTTGTCTTAAGCTTCCGAGCGGTGCTGAGTGGCCAGTGAAATTGACAAGGTGCAACGGTAAGGTTTGGTTTGAAAAGGGTTGGCCAGAGTTCTCTAAGTTCTTCTCTTTAGACTACGGTGACTTCCTAGTTTTTCAATATGAAGGGAATTCTGTATTCCAAGTTTGCATATTTGATAGAACTGCCACAGAAATTGATTACCCCATAGCAATGCCCGGGATGGAAGAGACGGATCATGAAGATGAAGAAGATGATGATATATCTATTGAAATGTTGGAGGATTCTCCACCCCGCCGGGAAGTTAAGAGGGAGAATTCTCCATTACCATGTCCTTCATCATACAAAAAAATGAGAACAAGTTGGAGTGATAAAGCAGCTGAGACGATGTCTGAAAATGATGTCGGAGGCTTATCGACTACACGAAAATGCTTAAAGAGAACACTTGAGGATCTTGGGGAGTTTCAATCACTGAATAATGATGAGAAGGCTCGAGCTCTTTTGAGTGCTGATGGTTTTATATCTGAAAAGGCTCACTTCAAGGTTGTCATTCAACCTTCATATGTTCAACAAAGTTATTTGGGTTTGCCAGCGAAGTTTTTTAAGGAAAATCAAATCAAGGCCGCTGCTTATGTCACCCTTCGGGTTTCAAACGGAAAAACTTGGTCAGTGAAGTTCAATTATGAACAATCAAAAGCCACACTCCAGCGTGGTTGGCTTGCATTTGTAAAGGACAATTGTCTCAAAGTCGGTGATGTGTGTGTCTTTCTCTTGATTAAGGACATTAATCTTTTATTTCAAGTTGAAATTTTGAGAGCTACAATCTTCCCCGTGCTAGTAGTGGCTGGGCATAGTAGAGGAGCAACTGTACATGTAGAAGATAATAGAAGCTCAATGAAAGTGGAATCTGATTGCGGTATGGACTGTGGTATGGCTTCTGTTAATCCTTCTCCTCTTGATATTGGCAATAAGAACAAAGGATCAGAAACTAGTGGGGAAGTTGCTGAGAGGCATTGCTCATTTTTGAGGGTTCCTAGGGATAACCTCGAAGCAGCCAGCAAGTTCATTCCAAAAAATCCCTTCTTTCGAGTCACTATTCGGGCTTATCACCTTGCGAGGTCAAATAATGTACCAGCCAATTTCATCAAGAAATCCATAAAGCGACTACAGCAGAAACAAACAGTGATGCTTCAAGTTAAAAATAGTTTATGGCCTGTGAATTTGGTACCTCGTACTCAAGGATCAGCTGGCAAACTTTGTGGTGGTTGGATTACATTTGCCGGGGAACATGATTTGAAAGATGGTGATGTTTGTGTTTTTGAGCTTATGGAGATGAAAGCCAATAATATTGTACTGAAAGTTCACATTTTTAGATGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

496

Amino Acids

55.89

Weight (kDa)

8.26

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 20 - 96 1.4e-14 B3 DNA binding domain
B3 PF02362 215 - 307 4.3e-18 B3 DNA binding domain
B3 PF02362 396 - 488 9.7e-10 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1330
AccB1I GGYRCC 1 cut(s) 1330
AccBSI CCGCTC 1 cut(s) 129
AciI CCGC 4 cut(s) 129, 400, 729, 1020
AclWI GGATC 4 cut(s) 348, 564, 1093, 1354
AcoI YGGCCR 2 cut(s) 140, 191
AcsI RAATTY 6 cut(s) 71, 103, 256, 421, 912, 1324
AfaI GTAC 6 cut(s) 54, 975, 1236, 1332, 1339, 1458
AflII CTTAAG 1 cut(s) 116
AflIII ACRYGT 1 cut(s) 976
AhlI ACTAGT 1 cut(s) 1094
AjiI CACGTC 1 cut(s) 41
AluBI AGCT 8 cut(s) 110, 121, 485, 602, 923, 996, 1352, 1429
AluI AGCT 8 cut(s) 110, 121, 485, 602, 923, 996, 1352, 1429
Alw21I GWGCWC 1 cut(s) 604
Alw26I GTCTC 3 cut(s) 329, 482, 851
AlwI GGATC 4 cut(s) 348, 564, 1093, 1354
Ama87I CYCGRG 2 cut(s) 323, 597
AoxI GGCC 4 cut(s) 140, 191, 726, 1316
ApeKI GCWGC 3 cut(s) 482, 731, 1157
ApoI RAATTY 6 cut(s) 71, 103, 256, 421, 912, 1324
AseI ATTAAT 1 cut(s) 891
Asp718I GGTACC 1 cut(s) 1330
AspA2I CCTAGG 1 cut(s) 1139
AsuC2I CCSGG 4 cut(s) 324, 325, 404, 1387
AsuHPI GGTGA 5 cut(s) 239, 733, 869, 1205, 1421
AvaI CYCGRG 2 cut(s) 323, 597
AvrII CCTAGG 1 cut(s) 1139
BalI TGGCCA 2 cut(s) 142, 193
BanI GGYRCC 1 cut(s) 1330
BanII GRGCYC 1 cut(s) 604
Bbv12I GWGCWC 1 cut(s) 604
BbvI GCAGC 3 cut(s) 494, 718, 1169
BccI CCATC 3 cut(s) 322, 611, 1400
BcnI CCSGG 4 cut(s) 324, 325, 404, 1387
BcoDI GTCTC 3 cut(s) 329, 482, 851
BcuI ACTAGT 1 cut(s) 1094
BfaI CTAG 4 cut(s) 236, 941, 1095, 1140
BfmI CTRYAG 1 cut(s) 1271
BfrI CTTAAG 1 cut(s) 116
BisI GCNGC 4 cut(s) 483, 729, 732, 1158
BlnI CCTAGG 1 cut(s) 1139
BlsI GCNGC 4 cut(s) 484, 730, 733, 1159
Bme1390I CCNGG 4 cut(s) 324, 325, 404, 1387
BmeT110I CYCGRG 2 cut(s) 323, 597
BmgBI CACGTC 1 cut(s) 41
BmiI GGNNCC 2 cut(s) 1137, 1332
BmrFI CCNGG 4 cut(s) 324, 325, 404, 1387
BmsI GCATC 1 cut(s) 1281
BoxI GACNNNNGTC 1 cut(s) 843
BpmI CTGGAG 1 cut(s) 794
BpuEI CTTGAG 2 cut(s) 572, 1326
BpuMI CCSGG 4 cut(s) 324, 325, 404, 1387
BsaJI CCNNGG 3 cut(s) 323, 1139, 1386
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bse1I ACTGG 1 cut(s) 143
Bse3DI GCAATG 2 cut(s) 324, 1117
BseDI CCNNGG 3 cut(s) 323, 1139, 1386
BseGI GGATG 1 cut(s) 333
BseMI GCAATG 2 cut(s) 324, 1117
BseMII CTCAG 3 cut(s) 126, 477, 1101
BseNI ACTGG 1 cut(s) 143
BseRI GAGGAG 2 cut(s) 978, 1047
BseXI GCAGC 3 cut(s) 494, 718, 1169
BseYI CCCAGC 1 cut(s) 950
BshFI GGCC 4 cut(s) 142, 193, 728, 1318
BshNI GGYRCC 1 cut(s) 1330
BsiHKAI GWGCWC 1 cut(s) 604
BsiHKCI CYCGRG 2 cut(s) 323, 597
BsiSI CCGG 3 cut(s) 324, 403, 1386
BsmAI GTCTC 3 cut(s) 329, 482, 851
BsmBI CGTCTC 2 cut(s) 329, 482
BsnI GGCC 4 cut(s) 142, 193, 728, 1318
BsoBI CYCGRG 2 cut(s) 323, 597
Bsp1286I GDGCHC 1 cut(s) 604
Bsp1407I TGTACA 2 cut(s) 52, 973
Bsp143I GATC 4 cut(s) 340, 556, 1085, 1346
BspACI CCGC 4 cut(s) 129, 400, 729, 1020
BspANI GGCC 4 cut(s) 142, 193, 728, 1318
BspCNI CTCAG 3 cut(s) 127, 478, 1102
BspHI TCATGA 2 cut(s) 78, 343
BspLI GGNNCC 2 cut(s) 1137, 1332
BspPI GGATC 4 cut(s) 348, 564, 1093, 1354
BspT107I GGYRCC 1 cut(s) 1330
BspTI CTTAAG 1 cut(s) 116
BsrBI CCGCTC 1 cut(s) 129
BsrDI GCAATG 2 cut(s) 324, 1117
BsrGI TGTACA 2 cut(s) 52, 973
BsrI ACTGG 1 cut(s) 143
BssECI CCNNGG 3 cut(s) 323, 1139, 1386
BssMI GATC 4 cut(s) 340, 556, 1085, 1346
BssT1I CCWWGG 1 cut(s) 1139
Bst4CI ACNGT 5 cut(s) 167, 227, 973, 1031, 1288
Bst6I CTCTTC 1 cut(s) 327
BstAFI CTTAAG 1 cut(s) 116
BstAUI TGTACA 2 cut(s) 52, 973
BstC8I GCNNGC 4 cut(s) 696, 825, 1162, 1354
BstDEI CTNAG 4 cut(s) 135, 204, 486, 1110
BstF5I GGATG 1 cut(s) 333
BstKTI GATC 4 cut(s) 343, 559, 1088, 1349
BstMAI GTCTC 3 cut(s) 329, 482, 851
BstMBI GATC 4 cut(s) 340, 556, 1085, 1346
BstMWI GCNNNNNNNGC 2 cut(s) 820, 1273
BstNSI RCATGY 1 cut(s) 980
BstPAI GACNNNNGTC 1 cut(s) 843
BstSCI CCNGG 4 cut(s) 322, 323, 402, 1385
BstSFI CTRYAG 1 cut(s) 1271
BstV1I GCAGC 3 cut(s) 494, 718, 1169
BstX2I RGATCY 1 cut(s) 556
BstYI RGATCY 1 cut(s) 556
BsuRI GGCC 4 cut(s) 142, 193, 728, 1318
BtrI CACGTC 1 cut(s) 41
BtsCI GGATG 1 cut(s) 333
BtsIMutI CAGTG 4 cut(s) 150, 575, 780, 1293
Cac8I GCNNGC 4 cut(s) 696, 825, 1162, 1354
CciI TCATGA 2 cut(s) 78, 343
Cfr9I CCCGGG 1 cut(s) 323
Csp6I GTAC 6 cut(s) 53, 974, 1235, 1331, 1338, 1457
CspCI CAANNNNNGTGG 6 cut(s) 283, 318, 987, 1022, 1345, 1380
CviAII CATG 5 cut(s) 79, 344, 435, 977, 1394
CviQI GTAC 6 cut(s) 53, 974, 1235, 1331, 1338, 1457
DdeI CTNAG 4 cut(s) 135, 204, 486, 1110
DpnI GATC 4 cut(s) 342, 558, 1087, 1348
DpnII GATC 4 cut(s) 340, 556, 1085, 1346
EaeI YGGCCR 2 cut(s) 140, 191
Eam1104I CTCTTC 1 cut(s) 327
EarI CTCTTC 1 cut(s) 327
Ecl136II GAGCTC 1 cut(s) 602
Eco130I CCWWGG 1 cut(s) 1139
Eco24I GRGCYC 1 cut(s) 604
Eco53kI GAGCTC 1 cut(s) 602
Eco88I CYCGRG 2 cut(s) 323, 597
EcoICRI GAGCTC 1 cut(s) 602
EcoRI GAATTC 2 cut(s) 256, 421
EcoT14I CCWWGG 1 cut(s) 1139
EcoT38I GRGCYC 1 cut(s) 604
ErhI CCWWGG 1 cut(s) 1139
Esp3I CGTCTC 2 cut(s) 329, 482
FaeI CATG 5 cut(s) 82, 347, 438, 980, 1397
FalI AAGNNNNNCTT 2 cut(s) 626, 658
FatI CATG 5 cut(s) 78, 343, 434, 976, 1393
FauI CCCGC 1 cut(s) 407
FauNDI CATATG 1 cut(s) 667
Fnu4HI GCNGC 4 cut(s) 483, 729, 732, 1158
FokI GGATG 1 cut(s) 340
FriOI GRGCYC 1 cut(s) 604
Fsp4HI GCNGC 4 cut(s) 483, 729, 732, 1158
FspBI CTAG 4 cut(s) 236, 941, 1095, 1140
GluI GCNGC 4 cut(s) 483, 729, 732, 1158
GsaI CCCAGC 1 cut(s) 954
GsuI CTGGAG 1 cut(s) 794
HaeIII GGCC 4 cut(s) 142, 193, 728, 1318
HapII CCGG 3 cut(s) 324, 403, 1386
Hin1II CATG 5 cut(s) 82, 347, 438, 980, 1397
HindIII AAGCTT 1 cut(s) 119
HinfI GANTC 3 cut(s) 389, 1010, 1194
HpaII CCGG 3 cut(s) 324, 403, 1386
HphI GGTGA 5 cut(s) 239, 733, 869, 1205, 1421
Hpy166II GTNNAC 1 cut(s) 1468
Hpy188I TCNGA 7 cut(s) 38, 126, 499, 512, 631, 1015, 1090
Hpy188III TCNNGA 5 cut(s) 79, 344, 877, 1061, 1252
Hpy8I GTNNAC 1 cut(s) 1468
HpyAV CCTTC 7 cut(s) 245, 450, 586, 672, 755, 1062, 1195
HpyCH4III ACNGT 5 cut(s) 167, 227, 973, 1031, 1288
HpyCH4IV ACGT 1 cut(s) 40
HpyCH4V TGCA 3 cut(s) 162, 276, 827
HpyF10VI GCNNNNNNNGC 2 cut(s) 820, 1273
HpyF3I CTNAG 4 cut(s) 135, 204, 486, 1110
HpySE526I ACGT 1 cut(s) 40
Hsp92II CATG 5 cut(s) 82, 347, 438, 980, 1397
KpnI GGTACC 1 cut(s) 1334
Kzo9I GATC 4 cut(s) 340, 556, 1085, 1346
LmnI GCTCC 1 cut(s) 965
Lsp1109I GCAGC 3 cut(s) 494, 718, 1169
LweI GCATC 1 cut(s) 1281
MaeI CTAG 4 cut(s) 236, 941, 1095, 1140
MaeII ACGT 1 cut(s) 40
MaeIII GTNAC 3 cut(s) 227, 739, 1195
MalI GATC 4 cut(s) 342, 558, 1087, 1348
MbiI CCGCTC 1 cut(s) 129
MboI GATC 4 cut(s) 340, 556, 1085, 1346
MboII GAAGA 8 cut(s) 26, 202, 344, 359, 365, 368, 922, 995
MfeI CAATTG 1 cut(s) 841
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 1 cut(s) 604
MlsI TGGCCA 2 cut(s) 142, 193
MluNI TGGCCA 2 cut(s) 142, 193
MlyI GAGTC 1 cut(s) 1203
MmeI TCCRAC 5 cut(s) 16, 363, 449, 490, 1352
Mox20I TGGCCA 2 cut(s) 142, 193
MscI TGGCCA 2 cut(s) 142, 193
MseI TTAA 9 cut(s) 5, 117, 411, 539, 708, 882, 891, 1047, 1302
MslI CAYNNNNRTG 4 cut(s) 317, 348, 433, 532
Msp20I TGGCCA 2 cut(s) 142, 193
MspA1I CMGCKG 3 cut(s) 485, 731, 1352
MspCI CTTAAG 1 cut(s) 116
MspI CCGG 3 cut(s) 324, 403, 1386
MspR9I CCNGG 4 cut(s) 324, 325, 404, 1387
MunI CAATTG 1 cut(s) 841
MwoI GCNNNNNNNGC 2 cut(s) 820, 1273
NciI CCSGG 4 cut(s) 324, 325, 404, 1387
NdeI CATATG 1 cut(s) 667
NdeII GATC 4 cut(s) 340, 556, 1085, 1346
NlaIII CATG 5 cut(s) 82, 347, 438, 980, 1397
NlaIV GGNNCC 2 cut(s) 1137, 1332
NmuCI GTSAC 3 cut(s) 227, 739, 1195
NspI RCATGY 1 cut(s) 980
PaeR7I CTCGAG 1 cut(s) 597
PagI TCATGA 2 cut(s) 78, 343
PciI ACATGT 1 cut(s) 976
PfeI GAWTC 2 cut(s) 389, 1010
PflFI GACNNNGTC 1 cut(s) 493
PkrI GCNGC 4 cut(s) 484, 730, 733, 1159
PleI GAGTC 1 cut(s) 1202
PpsI GAGTC 1 cut(s) 1202
PscI ACATGT 1 cut(s) 976
PshAI GACNNNNGTC 1 cut(s) 843
PshBI ATTAAT 1 cut(s) 891
Psp124BI GAGCTC 1 cut(s) 604
PspFI CCCAGC 1 cut(s) 950
PspN4I GGNNCC 2 cut(s) 1137, 1332
PspXI VCTCGAGB 1 cut(s) 597
PsrI GAACNNNNNNTAC 2 cut(s) 1449, 1481
PsuI RGATCY 1 cut(s) 556
PsyI GACNNNGTC 1 cut(s) 493
PvuII CAGCTG 2 cut(s) 485, 1352
RsaI GTAC 6 cut(s) 54, 975, 1236, 1332, 1339, 1458
RsaNI GTAC 6 cut(s) 53, 974, 1235, 1331, 1338, 1457
RseI CAYNNNNRTG 4 cut(s) 317, 348, 433, 532
SacI GAGCTC 1 cut(s) 604
SaqAI TTAA 9 cut(s) 5, 117, 411, 539, 708, 882, 891, 1047, 1302
SatI GCNGC 4 cut(s) 483, 729, 732, 1158
Sau3AI GATC 4 cut(s) 340, 556, 1085, 1346
SchI GAGTC 1 cut(s) 1203
ScrFI CCNGG 4 cut(s) 324, 325, 404, 1387
SduI GDGCHC 1 cut(s) 604
SfaNI GCATC 1 cut(s) 1281
SfcI CTRYAG 1 cut(s) 1271
Sfr274I CTCGAG 1 cut(s) 597
SlaI CTCGAG 1 cut(s) 597
SmaI CCCGGG 1 cut(s) 325
SmiMI CAYNNNNRTG 4 cut(s) 317, 348, 433, 532
SmlI CTYRAG 4 cut(s) 116, 551, 597, 1341
SmoI CTYRAG 4 cut(s) 116, 551, 597, 1341
SpeI ACTAGT 1 cut(s) 1094
SsiI CCGC 4 cut(s) 129, 400, 729, 1020
SspI AATATT 1 cut(s) 1453
SspMI CTAG 4 cut(s) 236, 941, 1095, 1140
SstI GAGCTC 1 cut(s) 604
StyD4I CCNGG 4 cut(s) 322, 323, 402, 1385
StyI CCWWGG 1 cut(s) 1139
TaaI ACNGT 5 cut(s) 167, 227, 973, 1031, 1288
TaiI ACGT 1 cut(s) 43
TaqI TCGA 4 cut(s) 521, 598, 1152, 1192
TatI WGTACW 3 cut(s) 52, 973, 1456
TauI GCSGC 1 cut(s) 731
TfiI GAWTC 2 cut(s) 389, 1010
Tru1I TTAA 9 cut(s) 5, 117, 411, 539, 708, 882, 891, 1047, 1302
Tru9I TTAA 9 cut(s) 5, 117, 411, 539, 708, 882, 891, 1047, 1302
TscAI CASTG 4 cut(s) 150, 582, 780, 1293
TseFI GTSAC 3 cut(s) 227, 739, 1195
TseI GCWGC 3 cut(s) 482, 731, 1157
Tsp45I GTSAC 3 cut(s) 227, 739, 1195
TspGWI ACGGA 2 cut(s) 353, 774
TspMI CCCGGG 1 cut(s) 323
TspRI CASTG 4 cut(s) 150, 582, 780, 1293
Tth111I GACNNNGTC 1 cut(s) 493
Vha464I CTTAAG 1 cut(s) 116
VspI ATTAAT 1 cut(s) 891
XapI RAATTY 6 cut(s) 71, 103, 256, 421, 912, 1324
XceI RCATGY 1 cut(s) 980
XhoI CTCGAG 1 cut(s) 597
XmaI CCCGGG 1 cut(s) 323
XmaJI CCTAGG 1 cut(s) 1139
XspI CTAG 4 cut(s) 236, 941, 1095, 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.