B3 domain-containing
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 586 |
| Acc36I | ACCTGC | 1 cut(s) | 306 |
| AccII | CGCG | 1 cut(s) | 504 |
| AccIII | TCCGGA | 1 cut(s) | 130 |
| AciI | CCGC | 2 cut(s) | 945, 1354 |
| AcoI | YGGCCR | 1 cut(s) | 257 |
| AcsI | RAATTY | 8 cut(s) | 23, 38, 169, 710, 863, 965, 1262, 1328 |
| AfaI | GTAC | 2 cut(s) | 227, 913 |
| AflII | CTTAAG | 1 cut(s) | 1181 |
| AflIII | ACRYGT | 1 cut(s) | 937 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 142 |
| AjnI | CCWGG | 1 cut(s) | 628 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 28, 60 |
| AluBI | AGCT | 5 cut(s) | 18, 690, 883, 1037, 1049 |
| AluI | AGCT | 5 cut(s) | 18, 690, 883, 1037, 1049 |
| Alw26I | GTCTC | 4 cut(s) | 467, 572, 714, 882 |
| Aor13HI | TCCGGA | 1 cut(s) | 130 |
| AoxI | GGCC | 4 cut(s) | 257, 980, 1163, 1205 |
| ApeKI | GCWGC | 2 cut(s) | 948, 1126 |
| ApoI | RAATTY | 8 cut(s) | 23, 38, 169, 710, 863, 965, 1262, 1328 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 520, 904 |
| AspS9I | GGNCC | 1 cut(s) | 588 |
| AsuHPI | GGTGA | 3 cut(s) | 245, 1061, 1304 |
| AvaII | GGWCC | 1 cut(s) | 588 |
| AxyI | CCTNAGG | 1 cut(s) | 984 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 217, 250 |
| BalI | TGGCCA | 1 cut(s) | 259 |
| BbsI | GAAGAC | 1 cut(s) | 982 |
| BbvI | GCAGC | 2 cut(s) | 935, 1113 |
| BccI | CCATC | 4 cut(s) | 847, 1184, 1187, 1197 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 782, 816 |
| BciT130I | CCWGG | 1 cut(s) | 630 |
| BciVI | GTATCC | 1 cut(s) | 384 |
| BcoDI | GTCTC | 4 cut(s) | 467, 572, 714, 882 |
| BfaI | CTAG | 5 cut(s) | 95, 108, 327, 909, 1167 |
| BfrI | CTTAAG | 1 cut(s) | 1181 |
| BfuAI | ACCTGC | 1 cut(s) | 306 |
| BfuI | GTATCC | 1 cut(s) | 384 |
| BglII | AGATCT | 1 cut(s) | 160 |
| BisI | GCNGC | 3 cut(s) | 946, 949, 1127 |
| BlsI | GCNGC | 3 cut(s) | 947, 950, 1128 |
| BmcAI | AGTACT | 1 cut(s) | 913 |
| Bme1390I | CCNGG | 1 cut(s) | 630 |
| Bme18I | GGWCC | 1 cut(s) | 588 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 142 |
| BmgT120I | GGNCC | 1 cut(s) | 588 |
| BmiI | GGNNCC | 2 cut(s) | 46, 589 |
| BmrFI | CCNGG | 1 cut(s) | 630 |
| BmrI | ACTGGG | 1 cut(s) | 131 |
| BmsI | GCATC | 4 cut(s) | 772, 790, 1162, 1285 |
| BmuI | ACTGGG | 1 cut(s) | 131 |
| BpiI | GAAGAC | 1 cut(s) | 982 |
| BpuEI | CTTGAG | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 1108 |
| BsaWI | WCCGGW | 2 cut(s) | 33, 130 |
| Bse118I | RCCGGY | 1 cut(s) | 1289 |
| Bse1I | ACTGG | 3 cut(s) | 126, 703, 1007 |
| Bse21I | CCTNAGG | 1 cut(s) | 984 |
| BseAI | TCCGGA | 1 cut(s) | 130 |
| BseBI | CCWGG | 1 cut(s) | 630 |
| BseDI | CCNNGG | 1 cut(s) | 1108 |
| BseGI | GGATG | 3 cut(s) | 748, 1003, 1176 |
| BseMII | CTCAG | 3 cut(s) | 707, 893, 975 |
| BseNI | ACTGG | 3 cut(s) | 126, 703, 1007 |
| BseRI | GAGGAG | 1 cut(s) | 1056 |
| BseXI | GCAGC | 2 cut(s) | 935, 1113 |
| BseYI | CCCAGC | 1 cut(s) | 48 |
| Bsh1236I | CGCG | 1 cut(s) | 504 |
| BshFI | GGCC | 4 cut(s) | 259, 982, 1165, 1207 |
| BsiSI | CCGG | 3 cut(s) | 34, 131, 1290 |
| BsmAI | GTCTC | 4 cut(s) | 467, 572, 714, 882 |
| BsmBI | CGTCTC | 1 cut(s) | 882 |
| BsnI | GGCC | 4 cut(s) | 259, 982, 1165, 1207 |
| Bsp13I | TCCGGA | 1 cut(s) | 130 |
| Bsp143I | GATC | 2 cut(s) | 160, 366 |
| BspACI | CCGC | 2 cut(s) | 945, 1354 |
| BspANI | GGCC | 4 cut(s) | 259, 982, 1165, 1207 |
| BspCNI | CTCAG | 3 cut(s) | 708, 892, 976 |
| BspEI | TCCGGA | 1 cut(s) | 130 |
| BspFNI | CGCG | 1 cut(s) | 504 |
| BspLI | GGNNCC | 2 cut(s) | 46, 589 |
| BspMI | ACCTGC | 1 cut(s) | 306 |
| BspTI | CTTAAG | 1 cut(s) | 1181 |
| BsrFI | RCCGGY | 1 cut(s) | 1289 |
| BsrI | ACTGG | 3 cut(s) | 126, 703, 1007 |
| BssAI | RCCGGY | 1 cut(s) | 1289 |
| BssECI | CCNNGG | 1 cut(s) | 1108 |
| BssMI | GATC | 2 cut(s) | 160, 366 |
| Bst2UI | CCWGG | 1 cut(s) | 630 |
| Bst4CI | ACNGT | 4 cut(s) | 453, 652, 876, 1135 |
| Bst6I | CTCTTC | 2 cut(s) | 676, 1021 |
| BstAFI | CTTAAG | 1 cut(s) | 1181 |
| BstDEI | CTNAG | 5 cut(s) | 14, 458, 716, 879, 984 |
| BstDSI | CCRYGG | 1 cut(s) | 1108 |
| BstF5I | GGATG | 3 cut(s) | 748, 1003, 1176 |
| BstFNI | CGCG | 1 cut(s) | 504 |
| BstKTI | GATC | 2 cut(s) | 163, 369 |
| BstMAI | GTCTC | 4 cut(s) | 467, 572, 714, 882 |
| BstMBI | GATC | 2 cut(s) | 160, 366 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1295 |
| BstNI | CCWGG | 1 cut(s) | 630 |
| BstNSI | RCATGY | 1 cut(s) | 941 |
| BstSCI | CCNGG | 1 cut(s) | 628 |
| BstUI | CGCG | 1 cut(s) | 504 |
| BstV1I | GCAGC | 2 cut(s) | 935, 1113 |
| BstV2I | GAAGAC | 1 cut(s) | 982 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| Bsu36I | CCTNAGG | 1 cut(s) | 984 |
| BsuI | GTATCC | 1 cut(s) | 384 |
| BsuRI | GGCC | 4 cut(s) | 259, 982, 1165, 1207 |
| BtgI | CCRYGG | 1 cut(s) | 1108 |
| BtsCI | GGATG | 3 cut(s) | 748, 1003, 1176 |
| BtsI | GCAGTG | 2 cut(s) | 531, 1241 |
| BtsIMutI | CAGTG | 4 cut(s) | 449, 531, 696, 1241 |
| BveI | ACCTGC | 1 cut(s) | 306 |
| Cfr10I | RCCGGY | 1 cut(s) | 1289 |
| Cfr13I | GGNCC | 1 cut(s) | 588 |
| Csp6I | GTAC | 2 cut(s) | 226, 912 |
| CviAII | CATG | 5 cut(s) | 413, 584, 931, 938, 1145 |
| CviQI | GTAC | 2 cut(s) | 226, 912 |
| DdeI | CTNAG | 5 cut(s) | 14, 458, 716, 879, 984 |
| DpnI | GATC | 2 cut(s) | 162, 368 |
| DpnII | GATC | 2 cut(s) | 160, 366 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 586 |
| DriI | GACNNNNNGTC | 1 cut(s) | 142 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 586 |
| EaeI | YGGCCR | 1 cut(s) | 257 |
| Eam1104I | CTCTTC | 2 cut(s) | 676, 1021 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 142 |
| EarI | CTCTTC | 2 cut(s) | 676, 1021 |
| Eco147I | AGGCCT | 1 cut(s) | 982 |
| Eco47I | GGWCC | 1 cut(s) | 588 |
| Eco81I | CCTNAGG | 1 cut(s) | 984 |
| EcoRII | CCWGG | 1 cut(s) | 628 |
| Esp3I | CGTCTC | 1 cut(s) | 882 |
| FaeI | CATG | 5 cut(s) | 416, 587, 934, 941, 1148 |
| FatI | CATG | 5 cut(s) | 412, 583, 930, 937, 1144 |
| FauNDI | CATATG | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 3 cut(s) | 946, 949, 1127 |
| FokI | GGATG | 3 cut(s) | 755, 990, 1163 |
| Fsp4HI | GCNGC | 3 cut(s) | 946, 949, 1127 |
| FspBI | CTAG | 5 cut(s) | 95, 108, 327, 909, 1167 |
| GluI | GCNGC | 3 cut(s) | 946, 949, 1127 |
| GsaI | CCCAGC | 1 cut(s) | 52 |
| HaeIII | GGCC | 4 cut(s) | 259, 982, 1165, 1207 |
| HapII | CCGG | 3 cut(s) | 34, 131, 1290 |
| Hin1II | CATG | 5 cut(s) | 416, 587, 934, 941, 1148 |
| HinfI | GANTC | 6 cut(s) | 111, 127, 419, 684, 812, 1000 |
| HpaII | CCGG | 3 cut(s) | 34, 131, 1290 |
| HphI | GGTGA | 3 cut(s) | 245, 1061, 1304 |
| Hpy188I | TCNGA | 6 cut(s) | 202, 311, 717, 1025, 1044, 1192 |
| Hpy188III | TCNNGA | 8 cut(s) | 82, 95, 108, 131, 268, 327, 480, 597 |
| HpyAV | CCTTC | 2 cut(s) | 311, 888 |
| HpyCH4III | ACNGT | 4 cut(s) | 453, 652, 876, 1135 |
| HpyCH4V | TGCA | 6 cut(s) | 536, 656, 803, 869, 1082, 1246 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1295 |
| HpyF3I | CTNAG | 5 cut(s) | 14, 458, 716, 879, 984 |
| Hsp92II | CATG | 5 cut(s) | 416, 587, 934, 941, 1148 |
| Kpn2I | TCCGGA | 1 cut(s) | 130 |
| Kzo9I | GATC | 2 cut(s) | 160, 366 |
| LmnI | GCTCC | 2 cut(s) | 956, 1196 |
| Lsp1109I | GCAGC | 2 cut(s) | 935, 1113 |
| LweI | GCATC | 4 cut(s) | 772, 790, 1162, 1285 |
| MaeI | CTAG | 5 cut(s) | 95, 108, 327, 909, 1167 |
| MaeIII | GTNAC | 2 cut(s) | 175, 766 |
| MalI | GATC | 2 cut(s) | 162, 368 |
| MboI | GATC | 2 cut(s) | 160, 366 |
| MboII | GAAGA | 6 cut(s) | 410, 612, 693, 809, 982, 1038 |
| MfeI | CAATTG | 1 cut(s) | 360 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MlsI | TGGCCA | 1 cut(s) | 259 |
| MluNI | TGGCCA | 1 cut(s) | 259 |
| MlyI | GAGTC | 2 cut(s) | 120, 693 |
| MmeI | TCCRAC | 1 cut(s) | 683 |
| Mox20I | TGGCCA | 1 cut(s) | 259 |
| MroI | TCCGGA | 1 cut(s) | 130 |
| MroXI | GAANNNNTTC | 2 cut(s) | 520, 904 |
| MscI | TGGCCA | 1 cut(s) | 259 |
| MseI | TTAA | 4 cut(s) | 117, 381, 1158, 1182 |
| Msp20I | TGGCCA | 1 cut(s) | 259 |
| MspCI | CTTAAG | 1 cut(s) | 1181 |
| MspI | CCGG | 3 cut(s) | 34, 131, 1290 |
| MspR9I | CCNGG | 1 cut(s) | 630 |
| MunI | CAATTG | 1 cut(s) | 360 |
| MvaI | CCWGG | 1 cut(s) | 630 |
| MvnI | CGCG | 1 cut(s) | 504 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1295 |
| NdeI | CATATG | 1 cut(s) | 193 |
| NdeII | GATC | 2 cut(s) | 160, 366 |
| NlaIII | CATG | 5 cut(s) | 416, 587, 934, 941, 1148 |
| NlaIV | GGNNCC | 2 cut(s) | 46, 589 |
| NmuCI | GTSAC | 1 cut(s) | 766 |
| NspI | RCATGY | 1 cut(s) | 941 |
| PceI | AGGCCT | 1 cut(s) | 982 |
| PciI | ACATGT | 1 cut(s) | 937 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 375 |
| PdmI | GAANNNNTTC | 2 cut(s) | 520, 904 |
| PfeI | GAWTC | 4 cut(s) | 127, 419, 812, 1000 |
| PkrI | GCNGC | 3 cut(s) | 947, 950, 1128 |
| PleI | GAGTC | 2 cut(s) | 119, 692 |
| PpsI | GAGTC | 2 cut(s) | 119, 692 |
| PscI | ACATGT | 1 cut(s) | 937 |
| Psp6I | CCWGG | 1 cut(s) | 628 |
| PspFI | CCCAGC | 1 cut(s) | 48 |
| PspGI | CCWGG | 1 cut(s) | 628 |
| PspN4I | GGNNCC | 2 cut(s) | 46, 589 |
| PspPI | GGNCC | 1 cut(s) | 588 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| RsaI | GTAC | 2 cut(s) | 227, 913 |
| RsaNI | GTAC | 2 cut(s) | 226, 912 |
| SaqAI | TTAA | 4 cut(s) | 117, 381, 1158, 1182 |
| SatI | GCNGC | 3 cut(s) | 946, 949, 1127 |
| Sau3AI | GATC | 2 cut(s) | 160, 366 |
| Sau96I | GGNCC | 1 cut(s) | 588 |
| ScaI | AGTACT | 1 cut(s) | 913 |
| SchI | GAGTC | 2 cut(s) | 120, 693 |
| ScrFI | CCNGG | 1 cut(s) | 630 |
| SfaNI | GCATC | 4 cut(s) | 772, 790, 1162, 1285 |
| SinI | GGWCC | 1 cut(s) | 588 |
| SmlI | CTYRAG | 2 cut(s) | 82, 1181 |
| SmoI | CTYRAG | 2 cut(s) | 82, 1181 |
| SseBI | AGGCCT | 1 cut(s) | 982 |
| SsiI | CCGC | 2 cut(s) | 945, 1354 |
| SspI | AATATT | 1 cut(s) | 825 |
| SspMI | CTAG | 5 cut(s) | 95, 108, 327, 909, 1167 |
| StuI | AGGCCT | 1 cut(s) | 982 |
| StyD4I | CCNGG | 1 cut(s) | 628 |
| TaaI | ACNGT | 4 cut(s) | 453, 652, 876, 1135 |
| TaqI | TCGA | 3 cut(s) | 269, 369, 481 |
| TatI | WGTACW | 1 cut(s) | 911 |
| TauI | GCSGC | 1 cut(s) | 948 |
| TfiI | GAWTC | 4 cut(s) | 127, 419, 812, 1000 |
| Tru1I | TTAA | 4 cut(s) | 117, 381, 1158, 1182 |
| Tru9I | TTAA | 4 cut(s) | 117, 381, 1158, 1182 |
| TscAI | CASTG | 4 cut(s) | 456, 538, 703, 1248 |
| TseFI | GTSAC | 1 cut(s) | 766 |
| TseI | GCWGC | 2 cut(s) | 948, 1126 |
| Tsp45I | GTSAC | 1 cut(s) | 766 |
| TspGWI | ACGGA | 1 cut(s) | 1097 |
| TspRI | CASTG | 4 cut(s) | 456, 538, 703, 1248 |
| Vha464I | CTTAAG | 1 cut(s) | 1181 |
| VpaK11BI | GGWCC | 1 cut(s) | 588 |
| XapI | RAATTY | 8 cut(s) | 23, 38, 169, 710, 863, 965, 1262, 1328 |
| XbaI | TCTAGA | 3 cut(s) | 94, 107, 326 |
| XceI | RCATGY | 1 cut(s) | 941 |
| XmnI | GAANNNNTTC | 2 cut(s) | 520, 904 |
| XspI | CTAG | 5 cut(s) | 95, 108, 327, 909, 1167 |
| ZrmI | AGTACT | 1 cut(s) | 913 |