Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000156

Physical Location & Seq

Genomic Coordinates Reverse (-)

52878830 .. 52882143

Gene Structure 3314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG412000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGACTTCGTATCTTAGCCGGGAATTTGACCACCGGAAATTCGGTTCCCAGCCCACATTTCGTTCCACTACTCCCCACTTCTTGAGTATTATTCTAGATGACACTTCTAGAGACGTTAAACTGGGGATTCCGGAGGACTTTGTGTCTAAATATGGAAAAGATCTATCAAATTCAGTAACTTTTAGGCTTCCATGTGGTTCAGAATGGGTAGTAGGATTGACAAGGTACAAAGGTGAGGTTTGGTTTGAGAAGGGTTGGCCAGACTTCGCGAAGTTTTACTCTCTTGGCTACAATGACCTGCTGGTTTTCGGATATGAAGAGAAGTCTAGATTTCAGGTTTCCATATTTGATAAAAGCACAATTGAGATCGAGTATCCCGTTAAAGTGCCTAACATTGAAGAAAGTGATGAACATGATGATTCTTCTGTTGAAATCTTGGAGGATTTTCCACTGTATCTAAGAAAAGCAGGGGAGACATCTCGACTACCAAGTCCTCTGCCTCACATGAAAAACAGAACAGTTTCAAGTGGCACTGCAAAAATCAATCTCAGTTTTGAGAAGTCTATGAAAAAGAAAGAGACACATGGGTCCAAATCAGGAAGAAAAAGGAAAGACCATTTCTCAGTGAAAAAAGAATTGGGAAGCACTTCTAGCACTAAGCGAGTCCAAAAACAAACACCAGAGGTTCATTCAAAGGCTAATGTTTTCAAATCTCACAACTGCCCTTTCAGAATCGTCATCCGCCCCTCCTATTTCAATCAAAATCTTTTGTGGTTGCCTTCTGAGTTTGTCCGGACACATCTTATGAAGCATCCAAGTAGTGTTATCCTTTGTGTTCCAGGTGGGAGTAAAACTTGGACGGTTGCATTGAATTATCAACAGAAAGCAAGAAGAGTCAGCTTCAACACTGGTTGGATTGAATTTCTGAGAGACAATAACTTGAAAGTTTGGGATGTTTGTGTGTTCATGTTGATTGATGAAATTAGACTTCTATTTGAAGTTGTCACAGAAGCTTCAAATTGCACCATGTCATCAGACACTGATGATGAGGAGGATAATGAGGATAATGTGACTGAACTTGATGATGCTGATGACGATGAAGATGCAGATGATGATTCCATTGAAATATTGGACCATTTTCCATCATTCACAAAAGGAAAGGAGAAATTTGCATTACCATCTCAGCTTCATAAAAGAAGGAGAGCAACTTCTAGTACTAAAGCAGAAAGCACCATGAAACATGTAGGCGGCTGCTCCAAAACTCAAAAATTCCTAAAGCAAAGGCCTGAGGTCTCCAGAAGGATTCATCCAGTTATGGCAAGTATCGGAAGAGATTTAGCTTTTCAGAGAGCTACTGCTTTCAAACCTCCTCACCCTCACTTTGCAGTTTCAATAAAACCCTCATATATCCGTGGAAACTATCTGTGGCTGCCAACTGTGTTTGTTCATGGACATCTTATTAAGCGGCCTAGTGATGCCATCCTTAAGGTTTCAGATGGAGCAGGATGGCCTGTTTGCTTTCATTACAACAAAGCAAGAGCCACACTGCAAGGTGGTTTCGCTAAATTTGTGCGAGCCAACAATTTGAAAGCCGGTGATGCTTGTGTGTTTGTATTGACCAACAACATCAAATTCTTATTTGATGTTTTCATTTTCCGCACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

555

Amino Acids

63.47

Weight (kDa)

8.97

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	34 - 118	2.6e-12	B3 DNA binding domain
B3	PF02362	245 - 327	2.6e-15	B3 DNA binding domain
B3	PF02362	462 - 550	2e-12	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca	FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica	MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica	Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis	pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis	RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata	RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora	Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa	Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha	Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana	Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	489, 586
Acc36I	ACCTGC	1 cut(s)	306
AccII	CGCG	1 cut(s)	269
AccIII	TCCGGA	2 cut(s)	130, 792
AciI	CCGC	4 cut(s)	742, 1248, 1465, 1657
AcoI	YGGCCR	1 cut(s)	257
AcsI	RAATTY	8 cut(s)	23, 38, 169, 920, 1166, 1268, 1565, 1631
AfaI	GTAC	2 cut(s)	227, 1216
AflII	CTTAAG	1 cut(s)	1484
AflIII	ACRYGT	1 cut(s)	1240
AhdI	GACNNNNNGTC	1 cut(s)	142
AjnI	CCWGG	1 cut(s)	838
AjuI	GAANNNNNNNTTGG	2 cut(s)	620, 652
AloI	GAACNNNNNNTCC	2 cut(s)	28, 60
AluBI	AGCT	5 cut(s)	900, 1013, 1186, 1340, 1352
AluI	AGCT	5 cut(s)	900, 1013, 1186, 1340, 1352
Alw26I	GTCTC	5 cut(s)	105, 467, 572, 924, 1297
AlwNI	CAGNNNCTG	1 cut(s)	1040
Aor13HI	TCCGGA	2 cut(s)	130, 792
AoxI	GGCC	4 cut(s)	257, 1283, 1466, 1508
ApeKI	GCWGC	2 cut(s)	1251, 1429
ApoI	RAATTY	8 cut(s)	23, 38, 169, 920, 1166, 1268, 1565, 1631
Asp700I	GAANNNNTTC	2 cut(s)	520, 646
AspS9I	GGNCC	2 cut(s)	588, 1132
AsuC2I	CCSGG	1 cut(s)	20
AsuHPI	GGTGA	3 cut(s)	245, 1364, 1607
AvaII	GGWCC	2 cut(s)	588, 1132
AxyI	CCTNAGG	1 cut(s)	1287
BaeI	ACNNNNGTAYC	2 cut(s)	217, 250
BalI	TGGCCA	1 cut(s)	259
BbvI	GCAGC	2 cut(s)	1238, 1416
BccI	CCATC	5 cut(s)	1150, 1186, 1487, 1490, 1500
BcgI	CGANNNNNNTGC	2 cut(s)	1085, 1119
BciT130I	CCWGG	1 cut(s)	840
BciVI	GTATCC	1 cut(s)	384
BcnI	CCSGG	1 cut(s)	20
BcoDI	GTCTC	5 cut(s)	105, 467, 572, 924, 1297
BfaI	CTAG	6 cut(s)	95, 108, 327, 651, 1212, 1470
BfrI	CTTAAG	1 cut(s)	1484
BfuAI	ACCTGC	1 cut(s)	306
BfuI	GTATCC	1 cut(s)	384
BglII	AGATCT	1 cut(s)	160
BisI	GCNGC	4 cut(s)	1249, 1252, 1430, 1466
BlsI	GCNGC	4 cut(s)	1250, 1253, 1431, 1467
BmcAI	AGTACT	1 cut(s)	1216
Bme1390I	CCNGG	2 cut(s)	20, 840
Bme18I	GGWCC	2 cut(s)	588, 1132
BmeRI	GACNNNNNGTC	1 cut(s)	142
BmgT120I	GGNCC	2 cut(s)	588, 1132
BmiI	GGNNCC	2 cut(s)	46, 589
BmrFI	CCNGG	2 cut(s)	20, 840
BmrI	ACTGGG	1 cut(s)	131
BmsI	GCATC	5 cut(s)	820, 1075, 1093, 1465, 1588
BmuI	ACTGGG	1 cut(s)	131
BpmI	CTGGAG	1 cut(s)	1279
BpuEI	CTTGAG	1 cut(s)	103
BpuMI	CCSGG	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	1297
BsaJI	CCNNGG	1 cut(s)	1411
BsaWI	WCCGGW	3 cut(s)	33, 130, 792
Bse118I	RCCGGY	1 cut(s)	1592
Bse1I	ACTGG	3 cut(s)	126, 913, 1310
Bse21I	CCTNAGG	1 cut(s)	1287
BseAI	TCCGGA	2 cut(s)	130, 792
BseBI	CCWGG	1 cut(s)	840
BseDI	CCNNGG	1 cut(s)	1411
BseGI	GGATG	6 cut(s)	738, 811, 958, 1306, 1479, 1511
BseMII	CTCAG	6 cut(s)	562, 636, 774, 917, 1196, 1278
BseNI	ACTGG	3 cut(s)	126, 913, 1310
BseRI	GAGGAG	2 cut(s)	1064, 1359
BseXI	GCAGC	2 cut(s)	1238, 1416
BseYI	CCCAGC	1 cut(s)	48
Bsh1236I	CGCG	1 cut(s)	269
BshFI	GGCC	4 cut(s)	259, 1285, 1468, 1510
BsiSI	CCGG	5 cut(s)	19, 34, 131, 793, 1593
BsmAI	GTCTC	5 cut(s)	105, 467, 572, 924, 1297
BsmBI	CGTCTC	1 cut(s)	105
BsnI	GGCC	4 cut(s)	259, 1285, 1468, 1510
Bso31I	GGTCTC	1 cut(s)	1297
Bsp13I	TCCGGA	2 cut(s)	130, 792
Bsp143I	GATC	2 cut(s)	160, 366
Bsp68I	TCGCGA	1 cut(s)	269
BspACI	CCGC	4 cut(s)	742, 1248, 1465, 1657
BspANI	GGCC	4 cut(s)	259, 1285, 1468, 1510
BspCNI	CTCAG	6 cut(s)	561, 635, 775, 918, 1195, 1279
BspEI	TCCGGA	2 cut(s)	130, 792
BspFNI	CGCG	1 cut(s)	269
BspLI	GGNNCC	2 cut(s)	46, 589
BspMI	ACCTGC	1 cut(s)	306
BspTI	CTTAAG	1 cut(s)	1484
BspTNI	GGTCTC	1 cut(s)	1297
BsrFI	RCCGGY	1 cut(s)	1592
BsrI	ACTGG	3 cut(s)	126, 913, 1310
BssAI	RCCGGY	1 cut(s)	1592
BssECI	CCNNGG	1 cut(s)	1411
BssMI	GATC	2 cut(s)	160, 366
Bst2UI	CCWGG	1 cut(s)	840
Bst4CI	ACNGT	4 cut(s)	453, 520, 862, 1438
Bst6I	CTCTTC	3 cut(s)	312, 886, 1324
BstAFI	CTTAAG	1 cut(s)	1484
BstC8I	GCNNGC	1 cut(s)	1575
BstDEI	CTNAG	9 cut(s)	14, 458, 548, 622, 657, 783, 926, 1182, 1287
BstDSI	CCRYGG	1 cut(s)	1411
BstF5I	GGATG	6 cut(s)	738, 811, 958, 1306, 1479, 1511
BstFNI	CGCG	1 cut(s)	269
BstKTI	GATC	2 cut(s)	163, 369
BstMAI	GTCTC	5 cut(s)	105, 467, 572, 924, 1297
BstMBI	GATC	2 cut(s)	160, 366
BstMWI	GCNNNNNNNGC	2 cut(s)	651, 1598
BstNI	CCWGG	1 cut(s)	840
BstNSI	RCATGY	1 cut(s)	1244
BstSCI	CCNGG	2 cut(s)	18, 838
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	2 cut(s)	1238, 1416
BstX2I	RGATCY	1 cut(s)	160
BstYI	RGATCY	1 cut(s)	160
Bsu36I	CCTNAGG	1 cut(s)	1287
BsuI	GTATCC	1 cut(s)	384
BsuRI	GGCC	4 cut(s)	259, 1285, 1468, 1510
BtgI	CCRYGG	1 cut(s)	1411
BtsCI	GGATG	6 cut(s)	738, 811, 958, 1306, 1479, 1511
BtsI	GCAGTG	2 cut(s)	531, 1544
BtsIMutI	CAGTG	6 cut(s)	449, 531, 630, 906, 1038, 1544
BtuMI	TCGCGA	1 cut(s)	269
BveI	ACCTGC	1 cut(s)	306
Cac8I	GCNNGC	1 cut(s)	1575
CaiI	CAGNNNCTG	1 cut(s)	1040
Cfr10I	RCCGGY	1 cut(s)	1592
Cfr13I	GGNCC	2 cut(s)	588, 1132
Csp6I	GTAC	2 cut(s)	226, 1215
CviAII	CATG	9 cut(s)	192, 413, 505, 584, 967, 1027, 1234, 1241, 1448
CviQI	GTAC	2 cut(s)	226, 1215
DdeI	CTNAG	9 cut(s)	14, 458, 548, 622, 657, 783, 926, 1182, 1287
DpnI	GATC	2 cut(s)	162, 368
DpnII	GATC	2 cut(s)	160, 366
DrdI	GACNNNNNNGTC	2 cut(s)	489, 586
DriI	GACNNNNNGTC	1 cut(s)	142
DseDI	GACNNNNNNGTC	2 cut(s)	489, 586
EaeI	YGGCCR	1 cut(s)	257
Eam1104I	CTCTTC	3 cut(s)	312, 886, 1324
Eam1105I	GACNNNNNGTC	1 cut(s)	142
EarI	CTCTTC	3 cut(s)	312, 886, 1324
EciI	GGCGGA	1 cut(s)	731
Eco147I	AGGCCT	1 cut(s)	1285
Eco31I	GGTCTC	1 cut(s)	1297
Eco47I	GGWCC	2 cut(s)	588, 1132
Eco81I	CCTNAGG	1 cut(s)	1287
EcoRII	CCWGG	1 cut(s)	838
Esp3I	CGTCTC	1 cut(s)	105
FaeI	CATG	9 cut(s)	195, 416, 508, 587, 970, 1030, 1237, 1244, 1451
FatI	CATG	9 cut(s)	191, 412, 504, 583, 966, 1026, 1233, 1240, 1447
Fnu4HI	GCNGC	4 cut(s)	1249, 1252, 1430, 1466
FokI	GGATG	6 cut(s)	725, 798, 965, 1293, 1466, 1518
Fsp4HI	GCNGC	4 cut(s)	1249, 1252, 1430, 1466
FspBI	CTAG	6 cut(s)	95, 108, 327, 651, 1212, 1470
GluI	GCNGC	4 cut(s)	1249, 1252, 1430, 1466
GsaI	CCCAGC	1 cut(s)	52
GsuI	CTGGAG	1 cut(s)	1279
HaeIII	GGCC	4 cut(s)	259, 1285, 1468, 1510
HapII	CCGG	5 cut(s)	19, 34, 131, 793, 1593
Hin1II	CATG	9 cut(s)	195, 416, 508, 587, 970, 1030, 1237, 1244, 1451
HindIII	AAGCTT	1 cut(s)	1011
HinfI	GANTC	7 cut(s)	127, 419, 663, 732, 894, 1115, 1303
HpaII	CCGG	5 cut(s)	19, 34, 131, 793, 1593
HphI	GGTGA	3 cut(s)	245, 1364, 1607
Hpy188I	TCNGA	9 cut(s)	202, 311, 731, 784, 927, 1036, 1328, 1347, 1495
HpyAV	CCTTC	4 cut(s)	244, 789, 1191, 1293
HpyCH4III	ACNGT	4 cut(s)	453, 520, 862, 1438
HpyCH4IV	ACGT	1 cut(s)	114
HpyCH4V	TGCA	7 cut(s)	536, 866, 1023, 1106, 1172, 1385, 1549
HpyF10VI	GCNNNNNNNGC	2 cut(s)	651, 1598
HpyF3I	CTNAG	9 cut(s)	14, 458, 548, 622, 657, 783, 926, 1182, 1287
HpySE526I	ACGT	1 cut(s)	114
Hsp92II	CATG	9 cut(s)	195, 416, 508, 587, 970, 1030, 1237, 1244, 1451
Kpn2I	TCCGGA	2 cut(s)	130, 792
Kzo9I	GATC	2 cut(s)	160, 366
LmnI	GCTCC	2 cut(s)	1259, 1499
Lsp1109I	GCAGC	2 cut(s)	1238, 1416
LweI	GCATC	5 cut(s)	820, 1075, 1093, 1465, 1588
MaeI	CTAG	6 cut(s)	95, 108, 327, 651, 1212, 1470
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	3 cut(s)	175, 1003, 1069
MalI	GATC	2 cut(s)	162, 368
MboI	GATC	2 cut(s)	160, 366
MboII	GAAGA	7 cut(s)	329, 410, 414, 612, 903, 1112, 1341
MfeI	CAATTG	1 cut(s)	360
MflI	RGATCY	1 cut(s)	160
MlsI	TGGCCA	1 cut(s)	259
MluNI	TGGCCA	1 cut(s)	259
MlyI	GAGTC	2 cut(s)	672, 903
MmeI	TCCRAC	1 cut(s)	893
Mox20I	TGGCCA	1 cut(s)	259
MroI	TCCGGA	2 cut(s)	130, 792
MroXI	GAANNNNTTC	2 cut(s)	520, 646
MscI	TGGCCA	1 cut(s)	259
MseI	TTAA	4 cut(s)	117, 381, 1461, 1485
Msp20I	TGGCCA	1 cut(s)	259
MspCI	CTTAAG	1 cut(s)	1484
MspI	CCGG	5 cut(s)	19, 34, 131, 793, 1593
MspR9I	CCNGG	2 cut(s)	20, 840
MunI	CAATTG	1 cut(s)	360
MvaI	CCWGG	1 cut(s)	840
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	2 cut(s)	651, 1598
NciI	CCSGG	1 cut(s)	20
NdeII	GATC	2 cut(s)	160, 366
NlaIII	CATG	9 cut(s)	195, 416, 508, 587, 970, 1030, 1237, 1244, 1451
NlaIV	GGNNCC	2 cut(s)	46, 589
NmuCI	GTSAC	2 cut(s)	1003, 1069
NruI	TCGCGA	1 cut(s)	269
NspI	RCATGY	1 cut(s)	1244
PceI	AGGCCT	1 cut(s)	1285
PciI	ACATGT	1 cut(s)	1240
PcsI	WCGNNNNNNNCGW	1 cut(s)	375
PdmI	GAANNNNTTC	2 cut(s)	520, 646
PfeI	GAWTC	5 cut(s)	127, 419, 732, 1115, 1303
PkrI	GCNGC	4 cut(s)	1250, 1253, 1431, 1467
PleI	GAGTC	2 cut(s)	671, 902
PpsI	GAGTC	2 cut(s)	671, 902
PscI	ACATGT	1 cut(s)	1240
Psp6I	CCWGG	1 cut(s)	838
PspFI	CCCAGC	1 cut(s)	48
PspGI	CCWGG	1 cut(s)	838
PspN4I	GGNNCC	2 cut(s)	46, 589
PspPI	GGNCC	2 cut(s)	588, 1132
PstNI	CAGNNNCTG	1 cut(s)	1040
PsuI	RGATCY	1 cut(s)	160
RruI	TCGCGA	1 cut(s)	269
RsaI	GTAC	2 cut(s)	227, 1216
RsaNI	GTAC	2 cut(s)	226, 1215
SaqAI	TTAA	4 cut(s)	117, 381, 1461, 1485
SatI	GCNGC	4 cut(s)	1249, 1252, 1430, 1466
Sau3AI	GATC	2 cut(s)	160, 366
Sau96I	GGNCC	2 cut(s)	588, 1132
ScaI	AGTACT	1 cut(s)	1216
SchI	GAGTC	2 cut(s)	672, 903
ScrFI	CCNGG	2 cut(s)	20, 840
SfaNI	GCATC	5 cut(s)	820, 1075, 1093, 1465, 1588
SinI	GGWCC	2 cut(s)	588, 1132
SmlI	CTYRAG	2 cut(s)	82, 1484
SmoI	CTYRAG	2 cut(s)	82, 1484
SseBI	AGGCCT	1 cut(s)	1285
SsiI	CCGC	4 cut(s)	742, 1248, 1465, 1657
SspI	AATATT	1 cut(s)	1128
SspMI	CTAG	6 cut(s)	95, 108, 327, 651, 1212, 1470
StuI	AGGCCT	1 cut(s)	1285
StyD4I	CCNGG	2 cut(s)	18, 838
TaaI	ACNGT	4 cut(s)	453, 520, 862, 1438
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	2 cut(s)	369, 481
TatI	WGTACW	1 cut(s)	1214
TauI	GCSGC	2 cut(s)	1251, 1468
TfiI	GAWTC	5 cut(s)	127, 419, 732, 1115, 1303
Tru1I	TTAA	4 cut(s)	117, 381, 1461, 1485
Tru9I	TTAA	4 cut(s)	117, 381, 1461, 1485
TscAI	CASTG	6 cut(s)	456, 538, 630, 913, 1045, 1551
TseFI	GTSAC	2 cut(s)	1003, 1069
TseI	GCWGC	2 cut(s)	1251, 1429
Tsp45I	GTSAC	2 cut(s)	1003, 1069
TspGWI	ACGGA	1 cut(s)	1400
TspRI	CASTG	6 cut(s)	456, 538, 630, 913, 1045, 1551
Vha464I	CTTAAG	1 cut(s)	1484
VpaK11BI	GGWCC	2 cut(s)	588, 1132
XapI	RAATTY	8 cut(s)	23, 38, 169, 920, 1166, 1268, 1565, 1631
XbaI	TCTAGA	3 cut(s)	94, 107, 326
XceI	RCATGY	1 cut(s)	1244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1126
XmnI	GAANNNNTTC	2 cut(s)	520, 646
XspI	CTAG	6 cut(s)	95, 108, 327, 651, 1212, 1470
ZrmI	AGTACT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.