FvH4_7g02010

B3 domain-containing transcription factor VRN1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000156
Physical Location & Seq
Reverse (-)
2387773 .. 2389816
2044 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g02010.t1

Sequence Viewer

Length: 1527 bp
ATGGGTTCTCTTCGCAAGCATCAAACATTTTCTTCCACCACTCCCCAATTTTTCCAGATAATTTTGGAGGACACTTCTAGAGATATCAAAATTAGAATTCCAAAGAAATTTGTCATGAAATATGGACAAGATGTATCAAATTCAGCTCGTCTTAAGCTTCCGAGTGGTGCTGAATGGCAAGTGGAATTGACAAGGTGCAACGGTAAGGTTTGGTTTGAAAAGGGTTGGCCAGAGTTCTCTAAGTTCTTCTCTTTAGACTACGGTAACTTCCTAGTTTTTCGATATGAAGGGAATTCTGTATTCCAAGTATGCATATTTGATAGAACTGCCACAGAAATCGATTACCCCATAGCAATGCCCGGGATGGAAGAGACGGATCATGAAGATGAAGAAGGTGATGATATATCTATTGAAATCTTGGAGGATTCTCCACTGGTACCCCGCCCGGAAGTTAAGAGGGAGAAATCTCCATTACCATGTCCTCCATCATACAAAAAAATGAGAACAAGTTGGAGTGATAAAACAGTTGAGACGATGTCTGAAAATGATGTCGGAGGCTCATCGCCTACACGAAAATGCTTAAATAGAACACTTGAGGATCTTGGGGAGTTTCAATCACTGAATAATGATGAGAAGGCTCGAGCGCTTTTGGGTGCTGATGGTTTTATATCTGAAAAGGCTCACTTCAAGGTTGTCATGCAACCTTCATATGTTCAACAAAGTTATTTGGGTTTGCCAGCGAAATTTTTTAAGGAAAATCAAATCAAGGCCGCTGCTTATGTCACCCTTCGGGTTTCAAACGGAAAAACTTGGTCAGTGAAGTTCAATTATGAACAATCAAAAGCCACACTCCAGCATGGTTGGCTTGCATTTGTAAAGGACAATTGTCTCAAAGTCGGTGATGTGTGTGTCTTTGTCTTGATTAAGGACATTAATCTTTTATTTCAAGTTGAAATTTTCAGGGCTACAATCTTCCCCGTGCTAGCAGGGCATAGTAGAGGAGCAGCTGTACATGTAGAAGATAATAGAAGCTCAATGAAAGTGGAATCTGATTGCGGCATGGACTGTGGTATGGCTTCTGTTAATCCTTCTCCTCTTGATATTGGCAATAAGAACAAAGGATCAGAAACTAGTGGGGAAGTTGCTGAAAGGCATTGCTCATTTTTGAGGGTTCCTAGGGATAACCTCGAAGCAGCCAGCAAGTTCATTCCAAAAAATCCCTTCTTTCGAGTCACTATTAGGGCTTATCACCTTGCGAGGTCAGGTGTGAATGTACCAGCCAATTTCATGAAGAAATCCATAAAGCGACTACAGGAGAAACAAACAGTGATGCTTCAAGTTAAAAATAGTTTATGGCCTGTGAATTTGGTACCTCGTACTCAAGGATCAGCTGGCAGACTTTGTAGTGGTTGGATAACATTTGCCAGGGAACATGATTTGAAAGAAGGTGATGTTTGTGTTTTTGAGCTTATGGAGATGAAAGCCAATAATATTGTACTGGAAGTTCACATTTTTAGATGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

509

Amino Acids

57.57

Weight (kDa)

8.14

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 21 - 108 1.3e-14 B3 DNA binding domain
B3 PF02362 229 - 322 2.6e-18 B3 DNA binding domain
B3 PF02362 408 - 499 2.6e-12 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 436, 1369
AccB1I GGYRCC 2 cut(s) 436, 1369
AciI CCGC 3 cut(s) 442, 771, 1056
AclWI GGATC 4 cut(s) 384, 606, 1129, 1393
AcoI YGGCCR 1 cut(s) 227
AcsI RAATTY 7 cut(s) 96, 107, 139, 292, 743, 954, 1363
AfaI GTAC 6 cut(s) 438, 1011, 1275, 1371, 1378, 1497
AfeI AGCGCT 1 cut(s) 645
AflII CTTAAG 1 cut(s) 152
AflIII ACRYGT 1 cut(s) 1012
AhlI ACTAGT 1 cut(s) 1130
AjnI CCWGG 1 cut(s) 1424
AluBI AGCT 6 cut(s) 146, 157, 1007, 1032, 1391, 1468
AluI AGCT 6 cut(s) 146, 157, 1007, 1032, 1391, 1468
Alw26I GTCTC 3 cut(s) 365, 524, 893
AlwI GGATC 4 cut(s) 384, 606, 1129, 1393
Ama87I CYCGRG 2 cut(s) 359, 639
Aor51HI AGCGCT 1 cut(s) 645
AoxI GGCC 3 cut(s) 227, 768, 1355
ApeKI GCWGC 3 cut(s) 773, 1004, 1193
ApoI RAATTY 7 cut(s) 96, 107, 139, 292, 743, 954, 1363
AseI ATTAAT 1 cut(s) 933
Asp718I GGTACC 2 cut(s) 436, 1369
AspA2I CCTAGG 1 cut(s) 1175
AspLEI GCGC 1 cut(s) 646
AsuC2I CCSGG 3 cut(s) 360, 361, 446
AsuHPI GGTGA 5 cut(s) 407, 775, 911, 1241, 1460
AsuNHI GCTAGC 1 cut(s) 982
AvaI CYCGRG 2 cut(s) 359, 639
AvrII CCTAGG 1 cut(s) 1175
BalI TGGCCA 1 cut(s) 229
BanI GGYRCC 2 cut(s) 436, 1369
BbvI GCAGC 3 cut(s) 760, 1016, 1205
BccI CCATC 3 cut(s) 358, 493, 653
BciT130I CCWGG 1 cut(s) 1426
BcnI CCSGG 3 cut(s) 360, 361, 446
BcoDI GTCTC 3 cut(s) 365, 524, 893
BcuI ACTAGT 1 cut(s) 1130
BfaI CTAG 5 cut(s) 78, 272, 983, 1131, 1176
BfmI CTRYAG 1 cut(s) 1310
BfoI RGCGCY 1 cut(s) 647
BfrI CTTAAG 1 cut(s) 152
BisI GCNGC 5 cut(s) 771, 774, 1005, 1057, 1194
BlnI CCTAGG 1 cut(s) 1175
BlsI GCNGC 5 cut(s) 772, 775, 1006, 1058, 1195
Bme1390I CCNGG 4 cut(s) 360, 361, 446, 1426
BmeT110I CYCGRG 2 cut(s) 359, 639
BmiI GGNNCC 3 cut(s) 438, 1173, 1371
BmrFI CCNGG 4 cut(s) 360, 361, 446, 1426
BmsI GCATC 2 cut(s) 28, 1320
BmtI GCTAGC 1 cut(s) 986
BoxI GACNNNNGTC 1 cut(s) 885
BpmI CTGGAG 1 cut(s) 836
BpuEI CTTGAG 2 cut(s) 614, 1365
BpuMI CCSGG 3 cut(s) 360, 361, 446
Bsa29I ATCGAT 1 cut(s) 339
BsaJI CCNNGG 3 cut(s) 359, 1175, 1425
BsaXI ACNNNNNCTCC 2 cut(s) 993, 1023
Bse1I ACTGG 2 cut(s) 438, 1503
Bse3DI GCAATG 2 cut(s) 360, 1153
BseBI CCWGG 1 cut(s) 1426
BseCI ATCGAT 1 cut(s) 339
BseDI CCNNGG 3 cut(s) 359, 1175, 1425
BseGI GGATG 1 cut(s) 369
BseMI GCAATG 2 cut(s) 360, 1153
BseNI ACTGG 2 cut(s) 438, 1503
BseRI GAGGAG 2 cut(s) 1014, 1083
BseXI GCAGC 3 cut(s) 760, 1016, 1205
BshFI GGCC 3 cut(s) 229, 770, 1357
BshNI GGYRCC 2 cut(s) 436, 1369
BshVI ATCGAT 1 cut(s) 339
BsiHKCI CYCGRG 2 cut(s) 359, 639
BsiSI CCGG 2 cut(s) 360, 446
BsmAI GTCTC 3 cut(s) 365, 524, 893
BsmBI CGTCTC 2 cut(s) 365, 524
BsnI GGCC 3 cut(s) 229, 770, 1357
BsoBI CYCGRG 2 cut(s) 359, 639
Bsp1407I TGTACA 1 cut(s) 1009
Bsp143I GATC 4 cut(s) 376, 598, 1121, 1385
BspACI CCGC 3 cut(s) 442, 771, 1056
BspANI GGCC 3 cut(s) 229, 770, 1357
BspDI ATCGAT 1 cut(s) 339
BspHI TCATGA 3 cut(s) 114, 379, 1287
BspLI GGNNCC 3 cut(s) 438, 1173, 1371
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 4 cut(s) 384, 606, 1129, 1393
BspT107I GGYRCC 2 cut(s) 436, 1369
BspTI CTTAAG 1 cut(s) 152
BsrDI GCAATG 2 cut(s) 360, 1153
BsrGI TGTACA 1 cut(s) 1009
BsrI ACTGG 2 cut(s) 438, 1503
BssECI CCNNGG 3 cut(s) 359, 1175, 1425
BssMI GATC 4 cut(s) 376, 598, 1121, 1385
BssT1I CCWWGG 1 cut(s) 1175
Bst2UI CCWGG 1 cut(s) 1426
Bst4CI ACNGT 5 cut(s) 203, 263, 526, 1067, 1327
Bst6I CTCTTC 2 cut(s) 15, 363
BstAFI CTTAAG 1 cut(s) 152
BstAUI TGTACA 1 cut(s) 1009
BstC8I GCNNGC 6 cut(s) 17, 738, 867, 984, 1198, 1393
BstDEI CTNAG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 369
BstH2I RGCGCY 1 cut(s) 647
BstHHI GCGC 1 cut(s) 646
BstKTI GATC 4 cut(s) 379, 601, 1124, 1388
BstMAI GTCTC 3 cut(s) 365, 524, 893
BstMBI GATC 4 cut(s) 376, 598, 1121, 1385
BstMWI GCNNNNNNNGC 2 cut(s) 862, 988
BstNI CCWGG 1 cut(s) 1426
BstNSI RCATGY 1 cut(s) 1016
BstPAI GACNNNNGTC 1 cut(s) 885
BstSCI CCNGG 4 cut(s) 358, 359, 444, 1424
BstSFI CTRYAG 1 cut(s) 1310
BstV1I GCAGC 3 cut(s) 760, 1016, 1205
BstX2I RGATCY 1 cut(s) 598
BstYI RGATCY 1 cut(s) 598
Bsu15I ATCGAT 1 cut(s) 339
BsuRI GGCC 3 cut(s) 229, 770, 1357
BsuTUI ATCGAT 1 cut(s) 339
BtgZI GCGATG 1 cut(s) 546
BtsCI GGATG 1 cut(s) 369
BtsIMutI CAGTG 4 cut(s) 431, 617, 822, 1332
Cac8I GCNNGC 6 cut(s) 17, 738, 867, 984, 1198, 1393
CciI TCATGA 3 cut(s) 114, 379, 1287
CfoI GCGC 1 cut(s) 646
Cfr9I CCCGGG 1 cut(s) 359
ClaI ATCGAT 1 cut(s) 339
Csp6I GTAC 6 cut(s) 437, 1010, 1274, 1370, 1377, 1496
CspCI CAANNNNNGTGG 2 cut(s) 1023, 1058
CviAII CATG 9 cut(s) 115, 380, 477, 697, 857, 1013, 1060, 1288, 1433
CviQI GTAC 6 cut(s) 437, 1010, 1274, 1370, 1377, 1496
DdeI CTNAG 1 cut(s) 240
DpnI GATC 4 cut(s) 378, 600, 1123, 1387
DpnII GATC 4 cut(s) 376, 598, 1121, 1385
EaeI YGGCCR 1 cut(s) 227
Eam1104I CTCTTC 2 cut(s) 15, 363
EarI CTCTTC 2 cut(s) 15, 363
Eco130I CCWWGG 1 cut(s) 1175
Eco32I GATATC 1 cut(s) 85
Eco47III AGCGCT 1 cut(s) 645
Eco88I CYCGRG 2 cut(s) 359, 639
EcoRI GAATTC 2 cut(s) 96, 292
EcoRII CCWGG 1 cut(s) 1424
EcoRV GATATC 1 cut(s) 85
EcoT14I CCWWGG 1 cut(s) 1175
EcoT22I ATGCAT 1 cut(s) 314
ErhI CCWWGG 1 cut(s) 1175
Esp3I CGTCTC 2 cut(s) 365, 524
FaeI CATG 9 cut(s) 118, 383, 480, 700, 860, 1016, 1063, 1291, 1436
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FatI CATG 9 cut(s) 114, 379, 476, 696, 856, 1012, 1059, 1287, 1432
FauI CCCGC 1 cut(s) 449
FauNDI CATATG 1 cut(s) 709
Fnu4HI GCNGC 5 cut(s) 771, 774, 1005, 1057, 1194
FokI GGATG 1 cut(s) 376
Fsp4HI GCNGC 5 cut(s) 771, 774, 1005, 1057, 1194
FspBI CTAG 5 cut(s) 78, 272, 983, 1131, 1176
GlaI GCGC 1 cut(s) 645
GluI GCNGC 5 cut(s) 771, 774, 1005, 1057, 1194
GsuI CTGGAG 1 cut(s) 836
HaeII RGCGCY 1 cut(s) 647
HaeIII GGCC 3 cut(s) 229, 770, 1357
HapII CCGG 2 cut(s) 360, 446
HhaI GCGC 1 cut(s) 646
Hin1II CATG 9 cut(s) 118, 383, 480, 700, 860, 1016, 1063, 1291, 1436
Hin6I GCGC 1 cut(s) 644
HinP1I GCGC 1 cut(s) 644
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 3 cut(s) 425, 1046, 1230
HpaII CCGG 2 cut(s) 360, 446
HphI GGTGA 5 cut(s) 407, 775, 911, 1241, 1460
Hpy166II GTNNAC 1 cut(s) 1507
Hpy188I TCNGA 6 cut(s) 162, 541, 554, 673, 1051, 1126
Hpy188III TCNNGA 7 cut(s) 55, 78, 115, 380, 919, 1097, 1288
Hpy8I GTNNAC 1 cut(s) 1507
HpyAV CCTTC 8 cut(s) 281, 386, 628, 714, 797, 1098, 1231, 1439
HpyCH4III ACNGT 5 cut(s) 203, 263, 526, 1067, 1327
HpyCH4V TGCA 4 cut(s) 198, 312, 700, 869
HpyF10VI GCNNNNNNNGC 2 cut(s) 862, 988
HpyF3I CTNAG 1 cut(s) 240
Hsp92II CATG 9 cut(s) 118, 383, 480, 700, 860, 1016, 1063, 1291, 1436
HspAI GCGC 1 cut(s) 644
KpnI GGTACC 2 cut(s) 440, 1373
Kzo9I GATC 4 cut(s) 376, 598, 1121, 1385
LmnI GCTCC 1 cut(s) 1001
Lsp1109I GCAGC 3 cut(s) 760, 1016, 1205
LweI GCATC 2 cut(s) 28, 1320
MaeI CTAG 5 cut(s) 78, 272, 983, 1131, 1176
MaeIII GTNAC 3 cut(s) 263, 781, 1231
MalI GATC 4 cut(s) 378, 600, 1123, 1387
MboI GATC 4 cut(s) 376, 598, 1121, 1385
MboII GAAGA 8 cut(s) 24, 238, 380, 395, 401, 964, 1031, 1303
MfeI CAATTG 1 cut(s) 883
MflI RGATCY 1 cut(s) 598
MlsI TGGCCA 1 cut(s) 229
MluNI TGGCCA 1 cut(s) 229
MlyI GAGTC 1 cut(s) 1239
MmeI TCCRAC 3 cut(s) 491, 532, 1391
Mox20I TGGCCA 1 cut(s) 229
Mph1103I ATGCAT 1 cut(s) 314
MscI TGGCCA 1 cut(s) 229
MseI TTAA 8 cut(s) 153, 453, 581, 750, 924, 933, 1083, 1341
MslI CAYNNNNRTG 4 cut(s) 353, 384, 475, 574
Msp20I TGGCCA 1 cut(s) 229
MspA1I CMGCKG 3 cut(s) 773, 1007, 1391
MspCI CTTAAG 1 cut(s) 152
MspI CCGG 2 cut(s) 360, 446
MspR9I CCNGG 4 cut(s) 360, 361, 446, 1426
MunI CAATTG 1 cut(s) 883
MvaI CCWGG 1 cut(s) 1426
MwoI GCNNNNNNNGC 2 cut(s) 862, 988
NciI CCSGG 3 cut(s) 360, 361, 446
NdeI CATATG 1 cut(s) 709
NdeII GATC 4 cut(s) 376, 598, 1121, 1385
NheI GCTAGC 1 cut(s) 982
NlaIII CATG 9 cut(s) 118, 383, 480, 700, 860, 1016, 1063, 1291, 1436
NlaIV GGNNCC 3 cut(s) 438, 1173, 1371
NmuCI GTSAC 2 cut(s) 781, 1231
NsiI ATGCAT 1 cut(s) 314
NspI RCATGY 1 cut(s) 1016
PaeR7I CTCGAG 1 cut(s) 639
PagI TCATGA 3 cut(s) 114, 379, 1287
PciI ACATGT 1 cut(s) 1012
PfeI GAWTC 2 cut(s) 425, 1046
PflFI GACNNNGTC 1 cut(s) 535
PkrI GCNGC 5 cut(s) 772, 775, 1006, 1058, 1195
PleI GAGTC 1 cut(s) 1238
PpsI GAGTC 1 cut(s) 1238
PscI ACATGT 1 cut(s) 1012
PshAI GACNNNNGTC 1 cut(s) 885
PshBI ATTAAT 1 cut(s) 933
Psp6I CCWGG 1 cut(s) 1424
PspGI CCWGG 1 cut(s) 1424
PspN4I GGNNCC 3 cut(s) 438, 1173, 1371
PspXI VCTCGAGB 1 cut(s) 639
PsrI GAACNNNNNNTAC 2 cut(s) 1488, 1520
PsuI RGATCY 1 cut(s) 598
PsyI GACNNNGTC 1 cut(s) 535
PvuII CAGCTG 2 cut(s) 1007, 1391
RsaI GTAC 6 cut(s) 438, 1011, 1275, 1371, 1378, 1497
RsaNI GTAC 6 cut(s) 437, 1010, 1274, 1370, 1377, 1496
RseI CAYNNNNRTG 4 cut(s) 353, 384, 475, 574
SaqAI TTAA 8 cut(s) 153, 453, 581, 750, 924, 933, 1083, 1341
SatI GCNGC 5 cut(s) 771, 774, 1005, 1057, 1194
Sau3AI GATC 4 cut(s) 376, 598, 1121, 1385
SchI GAGTC 1 cut(s) 1239
ScrFI CCNGG 4 cut(s) 360, 361, 446, 1426
SfaNI GCATC 2 cut(s) 28, 1320
SfcI CTRYAG 1 cut(s) 1310
Sfr274I CTCGAG 1 cut(s) 639
SlaI CTCGAG 1 cut(s) 639
SmaI CCCGGG 1 cut(s) 361
SmiMI CAYNNNNRTG 4 cut(s) 353, 384, 475, 574
SmlI CTYRAG 4 cut(s) 152, 593, 639, 1380
SmoI CTYRAG 4 cut(s) 152, 593, 639, 1380
SpeI ACTAGT 1 cut(s) 1130
SsiI CCGC 3 cut(s) 442, 771, 1056
SspI AATATT 1 cut(s) 1492
SspMI CTAG 5 cut(s) 78, 272, 983, 1131, 1176
StyD4I CCNGG 4 cut(s) 358, 359, 444, 1424
StyI CCWWGG 1 cut(s) 1175
TaaI ACNGT 5 cut(s) 203, 263, 526, 1067, 1327
TaqI TCGA 5 cut(s) 280, 339, 640, 1188, 1228
TatI WGTACW 2 cut(s) 1009, 1495
TauI GCSGC 2 cut(s) 773, 1059
TfiI GAWTC 2 cut(s) 425, 1046
Tru1I TTAA 8 cut(s) 153, 453, 581, 750, 924, 933, 1083, 1341
Tru9I TTAA 8 cut(s) 153, 453, 581, 750, 924, 933, 1083, 1341
TscAI CASTG 4 cut(s) 438, 624, 822, 1332
TseFI GTSAC 2 cut(s) 781, 1231
TseI GCWGC 3 cut(s) 773, 1004, 1193
Tsp45I GTSAC 2 cut(s) 781, 1231
TspGWI ACGGA 2 cut(s) 389, 816
TspMI CCCGGG 1 cut(s) 359
TspRI CASTG 4 cut(s) 438, 624, 822, 1332
Tth111I GACNNNGTC 1 cut(s) 535
Vha464I CTTAAG 1 cut(s) 152
VspI ATTAAT 1 cut(s) 933
XapI RAATTY 7 cut(s) 96, 107, 139, 292, 743, 954, 1363
XbaI TCTAGA 1 cut(s) 77
XceI RCATGY 1 cut(s) 1016
XhoI CTCGAG 1 cut(s) 639
XmaI CCCGGG 1 cut(s) 359
XmaJI CCTAGG 1 cut(s) 1175
XspI CTAG 5 cut(s) 78, 272, 983, 1131, 1176
Zsp2I ATGCAT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.