B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1606 |
| AciI | CCGC | 2 cut(s) | 751, 1015 |
| AclI | AACGTT | 1 cut(s) | 650 |
| AclWI | GGATC | 1 cut(s) | 62 |
| AcoI | YGGCCR | 1 cut(s) | 221 |
| AcuI | CTGAAG | 4 cut(s) | 1005, 1397, 1635, 1778 |
| AfaI | GTAC | 1 cut(s) | 1947 |
| AfeI | AGCGCT | 1 cut(s) | 688 |
| AflIII | ACRYGT | 1 cut(s) | 665 |
| AjnI | CCWGG | 2 cut(s) | 264, 672 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1243, 1275 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1503, 1535 |
| Alw21I | GWGCWC | 1 cut(s) | 1926 |
| Alw26I | GTCTC | 1 cut(s) | 444 |
| AlwI | GGATC | 1 cut(s) | 62 |
| Aor51HI | AGCGCT | 1 cut(s) | 688 |
| AoxI | GGCC | 5 cut(s) | 221, 752, 1628, 1723, 1814 |
| ApeKI | GCWGC | 5 cut(s) | 684, 817, 1213, 1282, 1871 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1087, 1697 |
| AspLEI | GCGC | 1 cut(s) | 689 |
| AspS9I | GGNCC | 1 cut(s) | 753 |
| AsuHPI | GGTGA | 2 cut(s) | 662, 1433 |
| BalI | TGGCCA | 1 cut(s) | 223 |
| BanII | GRGCYC | 2 cut(s) | 1369, 1926 |
| Bbv12I | GWGCWC | 1 cut(s) | 1926 |
| BbvI | GCAGC | 5 cut(s) | 696, 829, 1225, 1269, 1858 |
| BccI | CCATC | 6 cut(s) | 608, 845, 1070, 1307, 1310, 1495 |
| BceAI | ACGGC | 2 cut(s) | 353, 1825 |
| BciT130I | CCWGG | 2 cut(s) | 266, 674 |
| BciVI | GTATCC | 1 cut(s) | 754 |
| BclI | TGATCA | 1 cut(s) | 1348 |
| BcoDI | GTCTC | 1 cut(s) | 444 |
| BfaI | CTAG | 8 cut(s) | 21, 75, 248, 627, 692, 1092, 1755, 1833 |
| BfmI | CTRYAG | 1 cut(s) | 1545 |
| BfoI | RGCGCY | 1 cut(s) | 690 |
| BfuAI | ACCTGC | 1 cut(s) | 1606 |
| BfuI | GTATCC | 1 cut(s) | 754 |
| BglII | AGATCT | 1 cut(s) | 124 |
| BisI | GCNGC | 6 cut(s) | 685, 752, 818, 1214, 1283, 1872 |
| BlsI | GCNGC | 6 cut(s) | 686, 753, 819, 1215, 1284, 1873 |
| Bme1390I | CCNGG | 2 cut(s) | 266, 674 |
| BmgT120I | GGNCC | 1 cut(s) | 753 |
| BmrFI | CCNGG | 2 cut(s) | 266, 674 |
| BmrI | ACTGGG | 1 cut(s) | 1736 |
| BmsI | GCATC | 3 cut(s) | 179, 1440, 1779 |
| BmuI | ACTGGG | 1 cut(s) | 1736 |
| BpmI | CTGGAG | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 2 cut(s) | 560, 1345 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1659 |
| BsaJI | CCNNGG | 1 cut(s) | 756 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1503, 1533 |
| Bse1I | ACTGG | 1 cut(s) | 1742 |
| Bse3DI | GCAATG | 1 cut(s) | 1293 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1659 |
| BseBI | CCWGG | 2 cut(s) | 266, 674 |
| BseDI | CCNNGG | 1 cut(s) | 756 |
| BseGI | GGATG | 4 cut(s) | 856, 1143, 1299, 1321 |
| BseJI | GATNNNNATC | 1 cut(s) | 1659 |
| BseMI | GCAATG | 1 cut(s) | 1293 |
| BseMII | CTCAG | 1 cut(s) | 1152 |
| BseNI | ACTGG | 1 cut(s) | 1742 |
| BseRI | GAGGAG | 1 cut(s) | 1524 |
| BseXI | GCAGC | 5 cut(s) | 696, 829, 1225, 1269, 1858 |
| BseYI | CCCAGC | 1 cut(s) | 416 |
| BsgI | GTGCAG | 2 cut(s) | 556, 1634 |
| BshFI | GGCC | 5 cut(s) | 223, 754, 1630, 1725, 1816 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1926 |
| BslFI | GGGAC | 2 cut(s) | 1415, 1724 |
| BsmAI | GTCTC | 1 cut(s) | 444 |
| BsmFI | GGGAC | 2 cut(s) | 1415, 1724 |
| BsmI | GAATGC | 2 cut(s) | 438, 1571 |
| BsnI | GGCC | 5 cut(s) | 223, 754, 1630, 1725, 1816 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1369, 1926 |
| Bsp143I | GATC | 3 cut(s) | 54, 124, 1348 |
| BspACI | CCGC | 2 cut(s) | 751, 1015 |
| BspANI | GGCC | 5 cut(s) | 223, 754, 1630, 1725, 1816 |
| BspCNI | CTCAG | 1 cut(s) | 1153 |
| BspHI | TCATGA | 1 cut(s) | 1123 |
| BspMAI | CTGCAG | 1 cut(s) | 1549 |
| BspMI | ACCTGC | 1 cut(s) | 1606 |
| BspPI | GGATC | 1 cut(s) | 62 |
| BspQI | GCTCTTC | 1 cut(s) | 702 |
| BsrDI | GCAATG | 1 cut(s) | 1293 |
| BsrI | ACTGG | 1 cut(s) | 1742 |
| BssECI | CCNNGG | 1 cut(s) | 756 |
| BssMI | GATC | 3 cut(s) | 54, 124, 1348 |
| Bst2UI | CCWGG | 2 cut(s) | 266, 674 |
| Bst4CI | ACNGT | 1 cut(s) | 1786 |
| Bst6I | CTCTTC | 3 cut(s) | 15, 702, 1225 |
| BstC8I | GCNNGC | 2 cut(s) | 1287, 1291 |
| BstDEI | CTNAG | 2 cut(s) | 1161, 1975 |
| BstF5I | GGATG | 4 cut(s) | 856, 1143, 1299, 1321 |
| BstH2I | RGCGCY | 1 cut(s) | 690 |
| BstHHI | GCGC | 1 cut(s) | 689 |
| BstKTI | GATC | 3 cut(s) | 57, 127, 1351 |
| BstMAI | GTCTC | 1 cut(s) | 444 |
| BstMBI | GATC | 3 cut(s) | 54, 124, 1348 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 544, 639, 1295, 1877 |
| BstNI | CCWGG | 2 cut(s) | 266, 674 |
| BstNSI | RCATGY | 3 cut(s) | 538, 669, 1739 |
| BstSCI | CCNGG | 2 cut(s) | 264, 672 |
| BstSFI | CTRYAG | 1 cut(s) | 1545 |
| BstV1I | GCAGC | 5 cut(s) | 696, 829, 1225, 1269, 1858 |
| BstX2I | RGATCY | 1 cut(s) | 124 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 680 |
| BstYI | RGATCY | 1 cut(s) | 124 |
| BsuI | GTATCC | 1 cut(s) | 754 |
| BsuRI | GGCC | 5 cut(s) | 223, 754, 1630, 1725, 1816 |
| BtgZI | GCGATG | 2 cut(s) | 969, 1473 |
| BtsCI | GGATG | 4 cut(s) | 856, 1143, 1299, 1321 |
| BtsI | GCAGTG | 1 cut(s) | 568 |
| BtsIMutI | CAGTG | 2 cut(s) | 568, 1791 |
| BveI | ACCTGC | 1 cut(s) | 1606 |
| Cac8I | GCNNGC | 2 cut(s) | 1287, 1291 |
| CciI | TCATGA | 1 cut(s) | 1123 |
| CfoI | GCGC | 1 cut(s) | 689 |
| Cfr13I | GGNCC | 1 cut(s) | 753 |
| CsiI | ACCWGGT | 1 cut(s) | 672 |
| Csp6I | GTAC | 1 cut(s) | 1946 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 313, 348 |
| CviQI | GTAC | 1 cut(s) | 1946 |
| DdeI | CTNAG | 2 cut(s) | 1161, 1975 |
| DpnI | GATC | 3 cut(s) | 56, 126, 1350 |
| DpnII | GATC | 3 cut(s) | 54, 124, 1348 |
| EaeI | YGGCCR | 1 cut(s) | 221 |
| Eam1104I | CTCTTC | 3 cut(s) | 15, 702, 1225 |
| EarI | CTCTTC | 3 cut(s) | 15, 702, 1225 |
| Ecl136II | GAGCTC | 1 cut(s) | 1924 |
| Eco147I | AGGCCT | 1 cut(s) | 1630 |
| Eco24I | GRGCYC | 2 cut(s) | 1369, 1926 |
| Eco32I | GATATC | 1 cut(s) | 1271 |
| Eco47III | AGCGCT | 1 cut(s) | 688 |
| Eco53kI | GAGCTC | 1 cut(s) | 1924 |
| Eco57I | CTGAAG | 4 cut(s) | 1005, 1397, 1635, 1778 |
| EcoICRI | GAGCTC | 1 cut(s) | 1924 |
| EcoRI | GAATTC | 2 cut(s) | 286, 872 |
| EcoRII | CCWGG | 2 cut(s) | 264, 672 |
| EcoRV | GATATC | 1 cut(s) | 1271 |
| EcoT38I | GRGCYC | 2 cut(s) | 1369, 1926 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1618, 1650, 1682, 1714 |
| FaqI | GGGAC | 2 cut(s) | 1415, 1724 |
| FbaI | TGATCA | 1 cut(s) | 1348 |
| Fnu4HI | GCNGC | 6 cut(s) | 685, 752, 818, 1214, 1283, 1872 |
| FokI | GGATG | 4 cut(s) | 863, 1150, 1286, 1328 |
| FriOI | GRGCYC | 2 cut(s) | 1369, 1926 |
| Fsp4HI | GCNGC | 6 cut(s) | 685, 752, 818, 1214, 1283, 1872 |
| FspBI | CTAG | 8 cut(s) | 21, 75, 248, 627, 692, 1092, 1755, 1833 |
| GlaI | GCGC | 1 cut(s) | 688 |
| GluI | GCNGC | 6 cut(s) | 685, 752, 818, 1214, 1283, 1872 |
| GsaI | CCCAGC | 1 cut(s) | 420 |
| GsuI | CTGGAG | 1 cut(s) | 83 |
| HaeII | RGCGCY | 1 cut(s) | 690 |
| HaeIII | GGCC | 5 cut(s) | 223, 754, 1630, 1725, 1816 |
| HhaI | GCGC | 1 cut(s) | 689 |
| Hin6I | GCGC | 1 cut(s) | 687 |
| HinP1I | GCGC | 1 cut(s) | 687 |
| HincII | GTYRAC | 1 cut(s) | 921 |
| HindII | GTYRAC | 1 cut(s) | 921 |
| HindIII | AAGCTT | 2 cut(s) | 149, 1084 |
| HinfI | GANTC | 6 cut(s) | 563, 621, 903, 1104, 1371, 1693 |
| HphI | GGTGA | 2 cut(s) | 662, 1433 |
| Hpy166II | GTNNAC | 4 cut(s) | 245, 921, 1476, 1957 |
| Hpy188I | TCNGA | 9 cut(s) | 96, 156, 166, 760, 1024, 1065, 1186, 1315, 1654 |
| Hpy188III | TCNNGA | 7 cut(s) | 52, 62, 75, 973, 1124, 1375, 1664 |
| Hpy8I | GTNNAC | 4 cut(s) | 245, 921, 1476, 1957 |
| HpyCH4III | ACNGT | 1 cut(s) | 1786 |
| HpyCH4IV | ACGT | 2 cut(s) | 650, 923 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 544, 639, 1295, 1877 |
| HpyF3I | CTNAG | 2 cut(s) | 1161, 1975 |
| HpySE526I | ACGT | 2 cut(s) | 650, 923 |
| HspAI | GCGC | 1 cut(s) | 687 |
| Ksp22I | TGATCA | 1 cut(s) | 1348 |
| Kzo9I | GATC | 3 cut(s) | 54, 124, 1348 |
| LguI | GCTCTTC | 1 cut(s) | 702 |
| Lsp1109I | GCAGC | 5 cut(s) | 696, 829, 1225, 1269, 1858 |
| LweI | GCATC | 3 cut(s) | 179, 1440, 1779 |
| MabI | ACCWGGT | 1 cut(s) | 672 |
| MaeI | CTAG | 8 cut(s) | 21, 75, 248, 627, 692, 1092, 1755, 1833 |
| MaeII | ACGT | 2 cut(s) | 650, 923 |
| MaeIII | GTNAC | 5 cut(s) | 530, 622, 668, 827, 1618 |
| MalI | GATC | 3 cut(s) | 56, 126, 1350 |
| MboI | GATC | 3 cut(s) | 54, 124, 1348 |
| MfeI | CAATTG | 1 cut(s) | 1148 |
| MflI | RGATCY | 1 cut(s) | 124 |
| MhlI | GDGCHC | 2 cut(s) | 1369, 1926 |
| MlsI | TGGCCA | 1 cut(s) | 223 |
| MluNI | TGGCCA | 1 cut(s) | 223 |
| MlyI | GAGTC | 2 cut(s) | 630, 1365 |
| MmeI | TCCRAC | 1 cut(s) | 1088 |
| Mox20I | TGGCCA | 1 cut(s) | 223 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1087, 1697 |
| MscI | TGGCCA | 1 cut(s) | 223 |
| MslI | CAYNNNNRTG | 3 cut(s) | 297, 448, 1931 |
| Msp20I | TGGCCA | 1 cut(s) | 223 |
| MspR9I | CCNGG | 2 cut(s) | 266, 674 |
| MunI | CAATTG | 1 cut(s) | 1148 |
| Mva1269I | GAATGC | 2 cut(s) | 438, 1571 |
| MvaI | CCWGG | 2 cut(s) | 266, 674 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 544, 639, 1295, 1877 |
| NdeII | GATC | 3 cut(s) | 54, 124, 1348 |
| NmuCI | GTSAC | 3 cut(s) | 530, 622, 668 |
| NspI | RCATGY | 3 cut(s) | 538, 669, 1739 |
| PagI | TCATGA | 1 cut(s) | 1123 |
| PceI | AGGCCT | 1 cut(s) | 1630 |
| PciI | ACATGT | 1 cut(s) | 665 |
| PciSI | GCTCTTC | 1 cut(s) | 702 |
| PctI | GAATGC | 2 cut(s) | 438, 1571 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1087, 1697 |
| PfeI | GAWTC | 4 cut(s) | 563, 903, 1104, 1693 |
| PkrI | GCNGC | 6 cut(s) | 686, 753, 819, 1215, 1284, 1873 |
| PleI | GAGTC | 2 cut(s) | 629, 1365 |
| PpsI | GAGTC | 2 cut(s) | 629, 1365 |
| PscI | ACATGT | 1 cut(s) | 665 |
| Psp124BI | GAGCTC | 1 cut(s) | 1926 |
| Psp1406I | AACGTT | 1 cut(s) | 650 |
| Psp6I | CCWGG | 2 cut(s) | 264, 672 |
| PspFI | CCCAGC | 1 cut(s) | 416 |
| PspGI | CCWGG | 2 cut(s) | 264, 672 |
| PspPI | GGNCC | 1 cut(s) | 753 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1828, 1860, 1938, 1970 |
| PstI | CTGCAG | 1 cut(s) | 1549 |
| PsuI | RGATCY | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 1947 |
| RsaNI | GTAC | 1 cut(s) | 1946 |
| RseI | CAYNNNNRTG | 3 cut(s) | 297, 448, 1931 |
| SacI | GAGCTC | 1 cut(s) | 1926 |
| SapI | GCTCTTC | 1 cut(s) | 702 |
| SatI | GCNGC | 6 cut(s) | 685, 752, 818, 1214, 1283, 1872 |
| Sau3AI | GATC | 3 cut(s) | 54, 124, 1348 |
| Sau96I | GGNCC | 1 cut(s) | 753 |
| SchI | GAGTC | 2 cut(s) | 630, 1365 |
| ScrFI | CCNGG | 2 cut(s) | 266, 674 |
| SduI | GDGCHC | 2 cut(s) | 1369, 1926 |
| SexAI | ACCWGGT | 1 cut(s) | 672 |
| SfaNI | GCATC | 3 cut(s) | 179, 1440, 1779 |
| SfcI | CTRYAG | 1 cut(s) | 1545 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 297, 448, 1931 |
| SmlI | CTYRAG | 2 cut(s) | 539, 1360 |
| SmoI | CTYRAG | 2 cut(s) | 539, 1360 |
| SseBI | AGGCCT | 1 cut(s) | 1630 |
| SsiI | CCGC | 2 cut(s) | 751, 1015 |
| SspMI | CTAG | 8 cut(s) | 21, 75, 248, 627, 692, 1092, 1755, 1833 |
| SstI | GAGCTC | 1 cut(s) | 1926 |
| StuI | AGGCCT | 1 cut(s) | 1630 |
| StyD4I | CCNGG | 2 cut(s) | 264, 672 |
| TaaI | ACNGT | 1 cut(s) | 1786 |
| TaiI | ACGT | 2 cut(s) | 653, 926 |
| TaqI | TCGA | 4 cut(s) | 901, 1369, 1434, 1688 |
| TatI | WGTACW | 1 cut(s) | 1945 |
| TauI | GCSGC | 1 cut(s) | 754 |
| TfiI | GAWTC | 4 cut(s) | 563, 903, 1104, 1693 |
| TscAI | CASTG | 2 cut(s) | 575, 1791 |
| TseFI | GTSAC | 3 cut(s) | 530, 622, 668 |
| TseI | GCWGC | 5 cut(s) | 684, 817, 1213, 1282, 1871 |
| Tsp45I | GTSAC | 3 cut(s) | 530, 622, 668 |
| TspRI | CASTG | 2 cut(s) | 575, 1791 |
| XbaI | TCTAGA | 1 cut(s) | 74 |
| XceI | RCATGY | 3 cut(s) | 538, 669, 1739 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1087, 1697 |
| XspI | CTAG | 8 cut(s) | 21, 75, 248, 627, 692, 1092, 1755, 1833 |