Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000156

Physical Location & Seq

Genomic Coordinates Reverse (-)

15013389 .. 15015900

Gene Structure 2512 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47790

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGTTTCTCCTGGCCAGCAAACATTTTGTGCTACCACTCCCCATTTTTTCAAGGTTATTCTGGACGACAATTCTAGAGACCTCAAACTGGTAATTGTGCCTCTGTTTCTCGGGACACATTTCGTTGTGCAGAAAATTCCAAAGAAATTTCTGATAAAATATGGTGAGGATCTCTTAAATACGGTCTGTCTTAAACTTCCCAGTGGCTCTGAATGGGAAGTGGAATTGATAAGATGCAAGGGTAAGGCTTGGTTTGAAAAGGGTTGGCCAGAGTTCTCTAGGTTCTGCTGTCTTGACTGCGGTAACTTCCTAGTTTTTCGATATGAGGGGAATTCTACATTCGAAGCATGTATATTTGATAGGACTGCCACGGAGATTGATTATCCTATAACTGTGCCCAAGATTTATGAAGATGAAAATGATGATTTATCTATTGAAATCTTGGAGTTTCCACCCTGCCCAAAAACAAGGGAGAAACCTTCATTACTATATCCTGATTATCCTCTTTGCAAGAAAATGAGACCAAGCTCGAGTACTAGATCAGACAGGATTTCTGAAAATGAGAGTGCTCAACCTGATTCCATGGTCTTGTTTGAGAAGTCAATGCCAAACAAAGATTCACATTGCTCTAATTCAGAGATGAAAGGGAAAGGTGATTTTCTTGCAAAGAAAAATACAGCTGGAGGCTCTTCTTGCACTCCAAGATTCCTAAAACAAACAGTTGATCACGAGGTTATTGAAAATGCTATAGCTCATCAGAGAGCTACTGCATTCAAGCTTGATGACAACCCTTTTTTCAAGATCTCAATGAAGCCCTCTAATATCCATAAAAGTATTTTGTCTTTGCCATCTGAATTTTCCAAGAGACATCTTATTAAGCTGCCTGCTGGCATTGCCACCCTTCAAGTTTCGAGTGGAAGAACTTCGTCTGTTAAAACTTGGTCTGTAAAATTCAAGTATGATTTTGAGAACTCAAAAGCTCAATTACTGAATGGTTGGTCAGCATTTGTAAGGGACAATAATTTGAAAGTTAGGGATGTGTGTGGCTTTATCCTTATGGACCGCATTGAACTTTTATTCGAAGTTGCGCTTCCCAACGTAGAAGCTCCAAATTTCCCCTCGCCACCAGTCAAGAAGCCAATTATTAGTGGACAGGTTACTCATTGGCCTTCTTCATCTTTGAGGGATTCAAGGGTTAATCTTGAAGCTGGCAACAAGTTCGTCCCCAAGAATCCCTATTTCTTAGTCACTCTTGGGTCACTCCATAAAGAGAAGTCAAATGTGTCTGTACCGGCTGCATTTGTCAAGAGTTTCATTAAGGAGGCGAATCAAACCCTGAAGCTTCAGGTTAAAGATAGATCGTGGCCTGTAAAGGTGATTCGCTTCGGCAAGAATTCAGCCAAGTTTTCTGGTGGCTGGGCTGCATTTGCTAAAGAAAACGGGTTAGAGAAAGGAGACGTTTGCATATTCGAGCTCATGGAGATCAATGACATTGTACTGAAAGTTCACATTTTCAGATGTCGATTAAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

511

Amino Acids

57.84

Weight (kDa)

9.04

Isoelectric Point (pI)

37.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	46 - 120	9.9e-12	B3 DNA binding domain
B3	PF02362	265 - 355	5.7e-13	B3 DNA binding domain
B3	PF02362	419 - 506	1.4e-14	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca	FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica	MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica	Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis	pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis	RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata	RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora	Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa	Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha	Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana	Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	300, 1063
AclWI	GGATC	1 cut(s)	177
AcoI	YGGCCR	2 cut(s)	13, 266
AcsI	RAATTY	8 cut(s)	135, 146, 331, 854, 950, 1111, 1393, 1530
AcuI	CTGAAG	2 cut(s)	1328, 1358
AfaI	GTAC	3 cut(s)	535, 1290, 1497
AfiI	CCNNNNNNNGG	1 cut(s)	88
AjnI	CCWGG	1 cut(s)	10
AjuI	GAANNNNNNNTTGG	2 cut(s)	601, 633
Alw21I	GWGCWC	2 cut(s)	571, 1476
Alw26I	GTCTC	4 cut(s)	72, 514, 859, 1449
AlwI	GGATC	1 cut(s)	177
Ama87I	CYCGRG	2 cut(s)	110, 529
AoxI	GGCC	4 cut(s)	13, 266, 1166, 1364
ApeKI	GCWGC	3 cut(s)	880, 1295, 1421
ApoI	RAATTY	8 cut(s)	135, 146, 331, 854, 950, 1111, 1393, 1530
Asp700I	GAANNNNTTC	1 cut(s)	922
AspLEI	GCGC	1 cut(s)	1090
AspS9I	GGNCC	1 cut(s)	1060
AsuHPI	GGTGA	3 cut(s)	176, 665, 1387
AsuII	TTCGAA	2 cut(s)	342, 1080
AvaI	CYCGRG	2 cut(s)	110, 529
AvaII	GGWCC	1 cut(s)	1060
BaeGI	GKGCMC	1 cut(s)	399
BalI	TGGCCA	2 cut(s)	15, 268
BanII	GRGCYC	1 cut(s)	1476
BauI	CACGAG	1 cut(s)	728
Bbv12I	GWGCWC	2 cut(s)	571, 1476
BbvI	GCAGC	3 cut(s)	867, 1282, 1408
BccI	CCATC	1 cut(s)	856
BcgI	CGANNNNNNTGC	2 cut(s)	1201, 1235
BciT130I	CCWGG	1 cut(s)	12
BclI	TGATCA	1 cut(s)	724
BcoDI	GTCTC	4 cut(s)	72, 514, 859, 1449
BfaI	CTAG	4 cut(s)	75, 279, 311, 537
BfmI	CTRYAG	1 cut(s)	747
BglII	AGATCT	1 cut(s)	801
BisI	GCNGC	3 cut(s)	881, 1296, 1422
BlsI	GCNGC	3 cut(s)	882, 1297, 1423
BmcAI	AGTACT	1 cut(s)	535
Bme1390I	CCNGG	1 cut(s)	12
Bme18I	GGWCC	1 cut(s)	1060
BmeT110I	CYCGRG	2 cut(s)	110, 529
BmgT120I	GGNCC	1 cut(s)	1060
BmrFI	CCNGG	1 cut(s)	12
BmrI	ACTGGG	1 cut(s)	195
BmsI	GCATC	1 cut(s)	224
BmuI	ACTGGG	1 cut(s)	195
BpmI	CTGGAG	1 cut(s)	702
Bpu14I	TTCGAA	2 cut(s)	342, 1080
BsaI	GGTCTC	2 cut(s)	72, 514
BsaJI	CCNNGG	2 cut(s)	369, 582
Bsc4I	CCNNNNNNNGG	1 cut(s)	88
Bse118I	RCCGGY	1 cut(s)	1291
Bse1I	ACTGG	3 cut(s)	93, 201, 1127
Bse3DI	GCAATG	2 cut(s)	622, 891
BseBI	CCWGG	1 cut(s)	12
BseDI	CCNNGG	2 cut(s)	369, 582
BseGI	GGATG	1 cut(s)	1042
BseLI	CCNNNNNNNGG	1 cut(s)	88
BseMI	GCAATG	2 cut(s)	622, 891
BseNI	ACTGG	3 cut(s)	93, 201, 1127
BseSI	GKGCMC	1 cut(s)	399
BseXI	GCAGC	3 cut(s)	867, 1282, 1408
BseYI	CCCAGC	1 cut(s)	1416
BsgI	GTGCAG	1 cut(s)	149
BshFI	GGCC	4 cut(s)	15, 268, 1168, 1366
BsiHKAI	GWGCWC	2 cut(s)	571, 1476
BsiHKCI	CYCGRG	2 cut(s)	110, 529
BsiSI	CCGG	1 cut(s)	1292
BslFI	GGGAC	3 cut(s)	127, 1028, 1208
BslI	CCNNNNNNNGG	1 cut(s)	88
BsmAI	GTCTC	4 cut(s)	72, 514, 859, 1449
BsmBI	CGTCTC	1 cut(s)	1449
BsmFI	GGGAC	3 cut(s)	127, 1028, 1208
BsmI	GAATGC	1 cut(s)	770
BsnI	GGCC	4 cut(s)	15, 268, 1168, 1366
Bso31I	GGTCTC	2 cut(s)	72, 514
BsoBI	CYCGRG	2 cut(s)	110, 529
Bsp119I	TTCGAA	2 cut(s)	342, 1080
Bsp1286I	GDGCHC	3 cut(s)	399, 571, 1476
Bsp143I	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
Bsp19I	CCATGG	1 cut(s)	582
BspACI	CCGC	2 cut(s)	300, 1063
BspANI	GGCC	4 cut(s)	15, 268, 1168, 1366
BspPI	GGATC	1 cut(s)	177
BspQI	GCTCTTC	1 cut(s)	694
BspT104I	TTCGAA	2 cut(s)	342, 1080
BspTNI	GGTCTC	2 cut(s)	72, 514
BsrDI	GCAATG	2 cut(s)	622, 891
BsrFI	RCCGGY	1 cut(s)	1291
BsrI	ACTGG	3 cut(s)	93, 201, 1127
BssAI	RCCGGY	1 cut(s)	1291
BssECI	CCNNGG	2 cut(s)	369, 582
BssMI	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
BssSI	CACGAG	1 cut(s)	728
BssT1I	CCWWGG	1 cut(s)	582
Bst2BI	CACGAG	1 cut(s)	728
Bst2UI	CCWGG	1 cut(s)	12
Bst4CI	ACNGT	3 cut(s)	184, 394, 721
Bst6I	CTCTTC	1 cut(s)	694
BstBI	TTCGAA	2 cut(s)	342, 1080
BstC8I	GCNNGC	4 cut(s)	17, 885, 889, 1210
BstDEI	CTNAG	1 cut(s)	1243
BstDSI	CCRYGG	2 cut(s)	369, 582
BstF5I	GGATG	1 cut(s)	1042
BstHHI	GCGC	1 cut(s)	1090
BstKTI	GATC	6 cut(s)	172, 542, 727, 804, 1361, 1485
BstMAI	GTCTC	4 cut(s)	72, 514, 859, 1449
BstMBI	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
BstMWI	GCNNNNNNNGC	3 cut(s)	693, 893, 1427
BstNI	CCWGG	1 cut(s)	12
BstNSI	RCATGY	1 cut(s)	351
BstSCI	CCNGG	1 cut(s)	10
BstSFI	CTRYAG	1 cut(s)	747
BstSLI	GKGCMC	1 cut(s)	399
BstV1I	GCAGC	3 cut(s)	867, 1282, 1408
BstX2I	RGATCY	2 cut(s)	169, 801
BstYI	RGATCY	2 cut(s)	169, 801
BsuRI	GGCC	4 cut(s)	15, 268, 1168, 1366
BtgI	CCRYGG	2 cut(s)	369, 582
BtsCI	GGATG	1 cut(s)	1042
BtsIMutI	CAGTG	1 cut(s)	208
Cac8I	GCNNGC	4 cut(s)	17, 885, 889, 1210
CfoI	GCGC	1 cut(s)	1090
Cfr10I	RCCGGY	1 cut(s)	1291
Cfr13I	GGNCC	1 cut(s)	1060
Csp6I	GTAC	3 cut(s)	534, 1289, 1496
CspCI	CAANNNNNGTGG	2 cut(s)	358, 393
CviAII	CATG	3 cut(s)	348, 583, 1477
CviQI	GTAC	3 cut(s)	534, 1289, 1496
DdeI	CTNAG	1 cut(s)	1243
DpnI	GATC	6 cut(s)	171, 541, 726, 803, 1360, 1484
DpnII	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
EaeI	YGGCCR	2 cut(s)	13, 266
Eam1104I	CTCTTC	1 cut(s)	694
EarI	CTCTTC	1 cut(s)	694
Ecl136II	GAGCTC	1 cut(s)	1474
Eco130I	CCWWGG	1 cut(s)	582
Eco24I	GRGCYC	1 cut(s)	1476
Eco31I	GGTCTC	2 cut(s)	72, 514
Eco47I	GGWCC	1 cut(s)	1060
Eco53kI	GAGCTC	1 cut(s)	1474
Eco57I	CTGAAG	2 cut(s)	1328, 1358
Eco88I	CYCGRG	2 cut(s)	110, 529
EcoICRI	GAGCTC	1 cut(s)	1474
EcoRI	GAATTC	2 cut(s)	331, 1393
EcoRII	CCWGG	1 cut(s)	10
EcoT14I	CCWWGG	1 cut(s)	582
EcoT38I	GRGCYC	1 cut(s)	1476
ErhI	CCWWGG	1 cut(s)	582
Esp3I	CGTCTC	1 cut(s)	1449
FaeI	CATG	3 cut(s)	351, 586, 1480
FalI	AAGNNNNNCTT	2 cut(s)	1074, 1106
FaqI	GGGAC	3 cut(s)	127, 1028, 1208
FatI	CATG	3 cut(s)	347, 582, 1476
FbaI	TGATCA	1 cut(s)	724
Fnu4HI	GCNGC	3 cut(s)	881, 1296, 1422
FokI	GGATG	1 cut(s)	1049
FriOI	GRGCYC	1 cut(s)	1476
Fsp4HI	GCNGC	3 cut(s)	881, 1296, 1422
FspBI	CTAG	4 cut(s)	75, 279, 311, 537
GlaI	GCGC	1 cut(s)	1089
GluI	GCNGC	3 cut(s)	881, 1296, 1422
GsaI	CCCAGC	1 cut(s)	1420
GsuI	CTGGAG	1 cut(s)	702
HaeIII	GGCC	4 cut(s)	15, 268, 1168, 1366
HapII	CCGG	1 cut(s)	1292
HhaI	GCGC	1 cut(s)	1090
Hin1II	CATG	3 cut(s)	351, 586, 1480
Hin6I	GCGC	1 cut(s)	1088
HinP1I	GCGC	1 cut(s)	1088
HindIII	AAGCTT	2 cut(s)	776, 1340
HinfI	GANTC	7 cut(s)	578, 617, 705, 1187, 1231, 1327, 1378
HpaII	CCGG	1 cut(s)	1292
HphI	GGTGA	3 cut(s)	176, 665, 1387
Hpy166II	GTNNAC	2 cut(s)	1151, 1507
Hpy188I	TCNGA	8 cut(s)	153, 211, 544, 556, 637, 759, 853, 1517
Hpy8I	GTNNAC	2 cut(s)	1151, 1507
HpyAV	CCTTC	3 cut(s)	489, 911, 1179
HpyCH4III	ACNGT	3 cut(s)	184, 394, 721
HpyCH4IV	ACGT	2 cut(s)	1098, 1458
HpyCH4V	TGCA	9 cut(s)	130, 237, 510, 665, 696, 770, 1298, 1424, 1464
HpyF10VI	GCNNNNNNNGC	3 cut(s)	693, 893, 1427
HpyF3I	CTNAG	1 cut(s)	1243
HpySE526I	ACGT	2 cut(s)	1098, 1458
Hsp92II	CATG	3 cut(s)	351, 586, 1480
HspAI	GCGC	1 cut(s)	1088
Ksp22I	TGATCA	1 cut(s)	724
Kzo9I	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
LguI	GCTCTTC	1 cut(s)	694
LmnI	GCTCC	1 cut(s)	1111
Lsp1109I	GCAGC	3 cut(s)	867, 1282, 1408
LweI	GCATC	1 cut(s)	224
MaeI	CTAG	4 cut(s)	75, 279, 311, 537
MaeII	ACGT	2 cut(s)	1098, 1458
MaeIII	GTNAC	4 cut(s)	302, 1156, 1246, 1257
MalI	GATC	6 cut(s)	171, 541, 726, 803, 1360, 1484
MboI	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
MboII	GAAGA	4 cut(s)	422, 681, 930, 1164
MflI	RGATCY	2 cut(s)	169, 801
MhlI	GDGCHC	3 cut(s)	399, 571, 1476
MlsI	TGGCCA	2 cut(s)	15, 268
MluNI	TGGCCA	2 cut(s)	15, 268
Mox20I	TGGCCA	2 cut(s)	15, 268
MroXI	GAANNNNTTC	1 cut(s)	922
MscI	TGGCCA	2 cut(s)	15, 268
MseI	TTAA	9 cut(s)	176, 192, 876, 933, 1197, 1317, 1350, 1526, 1534
Msp20I	TGGCCA	2 cut(s)	15, 268
MspA1I	CMGCKG	1 cut(s)	680
MspI	CCGG	1 cut(s)	1292
MspR9I	CCNGG	1 cut(s)	12
Mva1269I	GAATGC	1 cut(s)	770
MvaI	CCWGG	1 cut(s)	12
MwoI	GCNNNNNNNGC	3 cut(s)	693, 893, 1427
NcoI	CCATGG	1 cut(s)	582
NdeII	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
NlaIII	CATG	3 cut(s)	351, 586, 1480
NmuCI	GTSAC	2 cut(s)	1246, 1257
NspI	RCATGY	1 cut(s)	351
NspV	TTCGAA	2 cut(s)	342, 1080
PaeR7I	CTCGAG	1 cut(s)	529
PciSI	GCTCTTC	1 cut(s)	694
PctI	GAATGC	1 cut(s)	770
PdmI	GAANNNNTTC	1 cut(s)	922
PfeI	GAWTC	7 cut(s)	578, 617, 705, 1187, 1231, 1327, 1378
PkrI	GCNGC	3 cut(s)	882, 1297, 1423
Psp124BI	GAGCTC	1 cut(s)	1476
Psp6I	CCWGG	1 cut(s)	10
PspFI	CCCAGC	1 cut(s)	1416
PspGI	CCWGG	1 cut(s)	10
PspPI	GGNCC	1 cut(s)	1060
PspXI	VCTCGAGB	1 cut(s)	529
PsrI	GAACNNNNNNTAC	2 cut(s)	1488, 1520
PsuI	RGATCY	2 cut(s)	169, 801
PvuII	CAGCTG	1 cut(s)	680
RsaI	GTAC	3 cut(s)	535, 1290, 1497
RsaNI	GTAC	3 cut(s)	534, 1289, 1496
SacI	GAGCTC	1 cut(s)	1476
SapI	GCTCTTC	1 cut(s)	694
SaqAI	TTAA	9 cut(s)	176, 192, 876, 933, 1197, 1317, 1350, 1526, 1534
SatI	GCNGC	3 cut(s)	881, 1296, 1422
Sau3AI	GATC	6 cut(s)	169, 539, 724, 801, 1358, 1482
Sau96I	GGNCC	1 cut(s)	1060
ScaI	AGTACT	1 cut(s)	535
ScrFI	CCNGG	1 cut(s)	12
SduI	GDGCHC	3 cut(s)	399, 571, 1476
SfaNI	GCATC	1 cut(s)	224
SfcI	CTRYAG	1 cut(s)	747
Sfr274I	CTCGAG	1 cut(s)	529
SfuI	TTCGAA	2 cut(s)	342, 1080
SinI	GGWCC	1 cut(s)	1060
SlaI	CTCGAG	1 cut(s)	529
SmlI	CTYRAG	1 cut(s)	529
SmoI	CTYRAG	1 cut(s)	529
SsiI	CCGC	2 cut(s)	300, 1063
SspMI	CTAG	4 cut(s)	75, 279, 311, 537
SstI	GAGCTC	1 cut(s)	1476
StyD4I	CCNGG	1 cut(s)	10
StyI	CCWWGG	1 cut(s)	582
TaaI	ACNGT	3 cut(s)	184, 394, 721
TaiI	ACGT	2 cut(s)	1101, 1461
TaqI	TCGA	7 cut(s)	319, 342, 530, 911, 1080, 1470, 1522
TatI	WGTACW	2 cut(s)	533, 1495
TfiI	GAWTC	7 cut(s)	578, 617, 705, 1187, 1231, 1327, 1378
Tru1I	TTAA	9 cut(s)	176, 192, 876, 933, 1197, 1317, 1350, 1526, 1534
Tru9I	TTAA	9 cut(s)	176, 192, 876, 933, 1197, 1317, 1350, 1526, 1534
TscAI	CASTG	1 cut(s)	208
TseFI	GTSAC	2 cut(s)	1246, 1257
TseI	GCWGC	3 cut(s)	880, 1295, 1421
Tsp45I	GTSAC	2 cut(s)	1246, 1257
TspDTI	ATGAA	7 cut(s)	423, 429, 471, 656, 824, 1164, 1303
TspGWI	ACGGA	1 cut(s)	386
TspRI	CASTG	1 cut(s)	208
VpaK11BI	GGWCC	1 cut(s)	1060
XapI	RAATTY	8 cut(s)	135, 146, 331, 854, 950, 1111, 1393, 1530
XbaI	TCTAGA	1 cut(s)	74
XceI	RCATGY	1 cut(s)	351
XhoI	CTCGAG	1 cut(s)	529
XmnI	GAANNNNTTC	1 cut(s)	922
XspI	CTAG	4 cut(s)	75, 279, 311, 537
ZrmI	AGTACT	1 cut(s)	535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.