B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 442, 611 |
| AclI | AACGTT | 2 cut(s) | 171, 321 |
| AclWI | GGATC | 2 cut(s) | 106, 119 |
| AcsI | RAATTY | 3 cut(s) | 122, 307, 314 |
| AcuI | CTGAAG | 1 cut(s) | 632 |
| AcvI | CACGTG | 1 cut(s) | 515 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 602 |
| AgsI | TTSAA | 4 cut(s) | 186, 319, 346, 667 |
| AjnI | CCWGG | 2 cut(s) | 765, 997 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 73, 105, 585, 617 |
| AluBI | AGCT | 6 cut(s) | 510, 644, 656, 662, 809, 977 |
| AluI | AGCT | 6 cut(s) | 510, 644, 656, 662, 809, 977 |
| Alw21I | GWGCWC | 1 cut(s) | 707 |
| Alw26I | GTCTC | 1 cut(s) | 876 |
| AlwI | GGATC | 2 cut(s) | 106, 119 |
| AoxI | GGCC | 3 cut(s) | 485, 812, 826 |
| ApoI | RAATTY | 3 cut(s) | 122, 307, 314 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 212, 244 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 597 |
| AsuHPI | GGTGA | 5 cut(s) | 230, 419, 812, 914, 987 |
| BamHI | GGATCC | 1 cut(s) | 111 |
| BanII | GRGCYC | 1 cut(s) | 611 |
| BbrPI | CACGTG | 1 cut(s) | 515 |
| BbsI | GAAGAC | 1 cut(s) | 473 |
| Bbv12I | GWGCWC | 1 cut(s) | 707 |
| BccI | CCATC | 5 cut(s) | 204, 209, 625, 710, 791 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 464, 498 |
| BciT130I | CCWGG | 2 cut(s) | 767, 999 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BcoDI | GTCTC | 1 cut(s) | 876 |
| BfaI | CTAG | 1 cut(s) | 93 |
| BfmI | CTRYAG | 2 cut(s) | 639, 969 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 834 |
| Bme1390I | CCNGG | 2 cut(s) | 767, 999 |
| BmiI | GGNNCC | 2 cut(s) | 113, 608 |
| BmrFI | CCNGG | 2 cut(s) | 767, 999 |
| BmrI | ACTGGG | 1 cut(s) | 841 |
| BmsI | GCATC | 2 cut(s) | 108, 622 |
| BmuI | ACTGGG | 1 cut(s) | 841 |
| BoxI | GACNNNNGTC | 1 cut(s) | 276 |
| BpiI | GAAGAC | 1 cut(s) | 473 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 248, 280 |
| BsaAI | YACGTR | 1 cut(s) | 515 |
| BsaBI | GATNNNNATC | 1 cut(s) | 720 |
| BsaJI | CCNNGG | 1 cut(s) | 696 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 961, 991 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 602 |
| Bse1I | ACTGG | 2 cut(s) | 158, 836 |
| Bse8I | GATNNNNATC | 1 cut(s) | 720 |
| BseBI | CCWGG | 2 cut(s) | 767, 999 |
| BseDI | CCNNGG | 1 cut(s) | 696 |
| BseGI | GGATG | 3 cut(s) | 220, 613, 783 |
| BseJI | GATNNNNATC | 1 cut(s) | 720 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 602 |
| BseMII | CTCAG | 2 cut(s) | 217, 237 |
| BseNI | ACTGG | 2 cut(s) | 158, 836 |
| BseRI | GAGGAG | 1 cut(s) | 37 |
| BseYI | CCCAGC | 1 cut(s) | 864 |
| BsgI | GTGCAG | 1 cut(s) | 537 |
| BshFI | GGCC | 3 cut(s) | 487, 814, 828 |
| BsiHKAI | GWGCWC | 1 cut(s) | 707 |
| BslFI | GGGAC | 1 cut(s) | 883 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 602 |
| BsmAI | GTCTC | 1 cut(s) | 876 |
| BsmFI | GGGAC | 1 cut(s) | 883 |
| BsnI | GGCC | 3 cut(s) | 487, 814, 828 |
| Bsp1286I | GDGCHC | 2 cut(s) | 611, 707 |
| Bsp143I | GATC | 3 cut(s) | 111, 145, 334 |
| Bsp19I | CCATGG | 1 cut(s) | 696 |
| BspACI | CCGC | 2 cut(s) | 442, 611 |
| BspANI | GGCC | 3 cut(s) | 487, 814, 828 |
| BspCNI | CTCAG | 2 cut(s) | 216, 238 |
| BspHI | TCATGA | 1 cut(s) | 772 |
| BspLI | GGNNCC | 2 cut(s) | 113, 608 |
| BspPI | GGATC | 2 cut(s) | 106, 119 |
| BspQI | GCTCTTC | 1 cut(s) | 651 |
| BsrI | ACTGG | 2 cut(s) | 158, 836 |
| BssECI | CCNNGG | 1 cut(s) | 696 |
| BssMI | GATC | 3 cut(s) | 111, 145, 334 |
| BssT1I | CCWWGG | 1 cut(s) | 696 |
| Bst2UI | CCWGG | 2 cut(s) | 767, 999 |
| Bst4CI | ACNGT | 1 cut(s) | 278 |
| Bst6I | CTCTTC | 2 cut(s) | 15, 651 |
| BstBAI | YACGTR | 1 cut(s) | 515 |
| BstC8I | GCNNGC | 3 cut(s) | 520, 611, 738 |
| BstDEI | CTNAG | 4 cut(s) | 107, 203, 246, 424 |
| BstDSI | CCRYGG | 1 cut(s) | 696 |
| BstF5I | GGATG | 3 cut(s) | 220, 613, 783 |
| BstKTI | GATC | 3 cut(s) | 114, 148, 337 |
| BstMAI | GTCTC | 1 cut(s) | 876 |
| BstMBI | GATC | 3 cut(s) | 111, 145, 334 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 834, 974 |
| BstNI | CCWGG | 2 cut(s) | 767, 999 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 276 |
| BstSCI | CCNGG | 2 cut(s) | 765, 997 |
| BstSFI | CTRYAG | 2 cut(s) | 639, 969 |
| BstV2I | GAAGAC | 1 cut(s) | 473 |
| BstX2I | RGATCY | 1 cut(s) | 111 |
| BstYI | RGATCY | 1 cut(s) | 111 |
| BsuRI | GGCC | 3 cut(s) | 487, 814, 828 |
| BtgI | CCRYGG | 1 cut(s) | 696 |
| BtsCI | GGATG | 3 cut(s) | 220, 613, 783 |
| BtsI | GCAGTG | 2 cut(s) | 482, 567 |
| BtsIMutI | CAGTG | 3 cut(s) | 482, 567, 829 |
| Cac8I | GCNNGC | 3 cut(s) | 520, 611, 738 |
| CciI | TCATGA | 1 cut(s) | 772 |
| CseI | GACGC | 1 cut(s) | 230 |
| CsiI | ACCWGGT | 1 cut(s) | 765 |
| CviAII | CATG | 5 cut(s) | 548, 688, 697, 773, 965 |
| DdeI | CTNAG | 4 cut(s) | 107, 203, 246, 424 |
| DpnI | GATC | 3 cut(s) | 113, 147, 336 |
| DpnII | GATC | 3 cut(s) | 111, 145, 334 |
| Eam1104I | CTCTTC | 2 cut(s) | 15, 651 |
| EarI | CTCTTC | 2 cut(s) | 15, 651 |
| Eco130I | CCWWGG | 1 cut(s) | 696 |
| Eco24I | GRGCYC | 1 cut(s) | 611 |
| Eco32I | GATATC | 1 cut(s) | 722 |
| Eco57I | CTGAAG | 1 cut(s) | 632 |
| Eco72I | CACGTG | 1 cut(s) | 515 |
| EcoRI | GAATTC | 1 cut(s) | 307 |
| EcoRII | CCWGG | 2 cut(s) | 765, 997 |
| EcoRV | GATATC | 1 cut(s) | 722 |
| EcoT14I | CCWWGG | 1 cut(s) | 696 |
| EcoT22I | ATGCAT | 1 cut(s) | 364 |
| EcoT38I | GRGCYC | 1 cut(s) | 611 |
| ErhI | CCWWGG | 1 cut(s) | 696 |
| FaeI | CATG | 5 cut(s) | 551, 691, 700, 776, 968 |
| FaqI | GGGAC | 1 cut(s) | 883 |
| FatI | CATG | 5 cut(s) | 547, 687, 696, 772, 964 |
| FauI | CCCGC | 2 cut(s) | 449, 618 |
| FauNDI | CATATG | 1 cut(s) | 726 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| FokI | GGATG | 3 cut(s) | 227, 600, 770 |
| FriOI | GRGCYC | 1 cut(s) | 611 |
| FspBI | CTAG | 1 cut(s) | 93 |
| GsaI | CCCAGC | 1 cut(s) | 868 |
| HaeIII | GGCC | 3 cut(s) | 487, 814, 828 |
| HgaI | GACGC | 1 cut(s) | 230 |
| Hin1II | CATG | 5 cut(s) | 551, 691, 700, 776, 968 |
| HincII | GTYRAC | 1 cut(s) | 1011 |
| HindII | GTYRAC | 1 cut(s) | 1011 |
| HindIII | AAGCTT | 1 cut(s) | 660 |
| HinfI | GANTC | 7 cut(s) | 42, 76, 401, 576, 598, 846, 852 |
| HphI | GGTGA | 5 cut(s) | 230, 419, 812, 914, 987 |
| Hpy166II | GTNNAC | 1 cut(s) | 1011 |
| Hpy188I | TCNGA | 6 cut(s) | 206, 247, 397, 651, 673, 851 |
| Hpy188III | TCNNGA | 4 cut(s) | 93, 269, 773, 856 |
| Hpy8I | GTNNAC | 1 cut(s) | 1011 |
| HpyAV | CCTTC | 2 cut(s) | 296, 628 |
| HpyCH4III | ACNGT | 1 cut(s) | 278 |
| HpyCH4IV | ACGT | 4 cut(s) | 171, 321, 514, 872 |
| HpyCH4V | TGCA | 6 cut(s) | 327, 362, 475, 518, 572, 987 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 834, 974 |
| HpyF3I | CTNAG | 4 cut(s) | 107, 203, 246, 424 |
| HpySE526I | ACGT | 4 cut(s) | 171, 321, 514, 872 |
| Hsp92II | CATG | 5 cut(s) | 551, 691, 700, 776, 968 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 3 cut(s) | 111, 145, 334 |
| LguI | GCTCTTC | 1 cut(s) | 651 |
| LmnI | GCTCC | 3 cut(s) | 606, 702, 982 |
| LweI | GCATC | 2 cut(s) | 108, 622 |
| MabI | ACCWGGT | 1 cut(s) | 765 |
| MaeI | CTAG | 1 cut(s) | 93 |
| MaeII | ACGT | 4 cut(s) | 171, 321, 514, 872 |
| MaeIII | GTNAC | 3 cut(s) | 218, 278, 412 |
| MalI | GATC | 3 cut(s) | 113, 147, 336 |
| MboI | GATC | 3 cut(s) | 111, 145, 334 |
| MboII | GAAGA | 4 cut(s) | 219, 473, 638, 855 |
| MflI | RGATCY | 1 cut(s) | 111 |
| MhlI | GDGCHC | 2 cut(s) | 611, 707 |
| MluCI | AATT | 9 cut(s) | 21, 122, 307, 314, 391, 821, 897, 982, 1015 |
| MnlI | CCTC | 5 cut(s) | 58, 89, 498, 548, 833 |
| Mph1103I | ATGCAT | 1 cut(s) | 364 |
| MroXI | GAANNNNTTC | 1 cut(s) | 597 |
| MseI | TTAA | 4 cut(s) | 168, 365, 762, 936 |
| MspR9I | CCNGG | 2 cut(s) | 767, 999 |
| MvaI | CCWGG | 2 cut(s) | 767, 999 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 834, 974 |
| NcoI | CCATGG | 1 cut(s) | 696 |
| NdeI | CATATG | 1 cut(s) | 726 |
| NdeII | GATC | 3 cut(s) | 111, 145, 334 |
| NlaIII | CATG | 5 cut(s) | 551, 691, 700, 776, 968 |
| NlaIV | GGNNCC | 2 cut(s) | 113, 608 |
| NmeAIII | GCCGAG | 1 cut(s) | 766 |
| NmuCI | GTSAC | 2 cut(s) | 218, 278 |
| NsiI | ATGCAT | 1 cut(s) | 364 |
| PagI | TCATGA | 1 cut(s) | 772 |
| PciSI | GCTCTTC | 1 cut(s) | 651 |
| PdmI | GAANNNNTTC | 1 cut(s) | 597 |
| PfeI | GAWTC | 7 cut(s) | 42, 76, 401, 576, 598, 846, 852 |
| PmaCI | CACGTG | 1 cut(s) | 515 |
| PmlI | CACGTG | 1 cut(s) | 515 |
| Ppu21I | YACGTR | 1 cut(s) | 515 |
| PshAI | GACNNNNGTC | 1 cut(s) | 276 |
| Psp1406I | AACGTT | 2 cut(s) | 171, 321 |
| Psp6I | CCWGG | 2 cut(s) | 765, 997 |
| PspCI | CACGTG | 1 cut(s) | 515 |
| PspFI | CCCAGC | 1 cut(s) | 864 |
| PspGI | CCWGG | 2 cut(s) | 765, 997 |
| PspN4I | GGNNCC | 2 cut(s) | 113, 608 |
| PsuI | RGATCY | 1 cut(s) | 111 |
| SapI | GCTCTTC | 1 cut(s) | 651 |
| SaqAI | TTAA | 4 cut(s) | 168, 365, 762, 936 |
| Sau3AI | GATC | 3 cut(s) | 111, 145, 334 |
| ScrFI | CCNGG | 2 cut(s) | 767, 999 |
| SduI | GDGCHC | 2 cut(s) | 611, 707 |
| SexAI | ACCWGGT | 1 cut(s) | 765 |
| SfaNI | GCATC | 2 cut(s) | 108, 622 |
| SfcI | CTRYAG | 2 cut(s) | 639, 969 |
| Sse9I | AATT | 9 cut(s) | 21, 122, 307, 314, 391, 821, 897, 982, 1015 |
| SsiI | CCGC | 2 cut(s) | 442, 611 |
| SspI | AATATT | 1 cut(s) | 712 |
| SspMI | CTAG | 1 cut(s) | 93 |
| StyD4I | CCNGG | 2 cut(s) | 765, 997 |
| StyI | CCWWGG | 1 cut(s) | 696 |
| TaaI | ACNGT | 1 cut(s) | 278 |
| TaiI | ACGT | 4 cut(s) | 174, 324, 517, 875 |
| TaqI | TCGA | 2 cut(s) | 295, 620 |
| TasI | AATT | 9 cut(s) | 21, 122, 307, 314, 391, 821, 897, 982, 1015 |
| TfiI | GAWTC | 7 cut(s) | 42, 76, 401, 576, 598, 846, 852 |
| Tru1I | TTAA | 4 cut(s) | 168, 365, 762, 936 |
| Tru9I | TTAA | 4 cut(s) | 168, 365, 762, 936 |
| TscAI | CASTG | 3 cut(s) | 482, 574, 836 |
| TseFI | GTSAC | 2 cut(s) | 218, 278 |
| Tsp45I | GTSAC | 2 cut(s) | 218, 278 |
| TspDTI | ATGAA | 5 cut(s) | 146, 315, 395, 676, 761 |
| TspGWI | ACGGA | 1 cut(s) | 459 |
| TspRI | CASTG | 3 cut(s) | 482, 574, 836 |
| XapI | RAATTY | 3 cut(s) | 122, 307, 314 |
| XbaI | TCTAGA | 1 cut(s) | 92 |
| XmnI | GAANNNNTTC | 1 cut(s) | 597 |
| XspI | CTAG | 1 cut(s) | 93 |
| Zsp2I | ATGCAT | 1 cut(s) | 364 |