B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 725 |
| AccII | CGCG | 1 cut(s) | 541 |
| AccIII | TCCGGA | 2 cut(s) | 16, 490 |
| AciI | CCGC | 2 cut(s) | 655, 723 |
| AclWI | GGATC | 1 cut(s) | 33 |
| AcoI | YGGCCR | 2 cut(s) | 38, 245 |
| AcsI | RAATTY | 6 cut(s) | 125, 310, 317, 515, 986, 1018 |
| AfaI | GTAC | 2 cut(s) | 165, 1031 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 377 |
| AgsI | TTSAA | 8 cut(s) | 73, 89, 172, 520, 641, 833, 851, 974 |
| AjnI | CCWGG | 1 cut(s) | 735 |
| AluBI | AGCT | 4 cut(s) | 45, 175, 668, 780 |
| AluI | AGCT | 4 cut(s) | 45, 175, 668, 780 |
| Alw21I | GWGCWC | 1 cut(s) | 860 |
| Alw26I | GTCTC | 1 cut(s) | 293 |
| Alw44I | GTGCAC | 1 cut(s) | 856 |
| AlwI | GGATC | 1 cut(s) | 33 |
| Aor13HI | TCCGGA | 2 cut(s) | 16, 490 |
| AoxI | GGCC | 5 cut(s) | 38, 245, 712, 733, 959 |
| ApaLI | GTGCAC | 1 cut(s) | 856 |
| ApeKI | GCWGC | 4 cut(s) | 457, 668, 692, 932 |
| ApoI | RAATTY | 6 cut(s) | 125, 310, 317, 515, 986, 1018 |
| AspLEI | GCGC | 1 cut(s) | 541 |
| AspS9I | GGNCC | 1 cut(s) | 712 |
| AsuC2I | CCSGG | 1 cut(s) | 378 |
| AsuHPI | GGTGA | 2 cut(s) | 293, 873 |
| BaeGI | GKGCMC | 1 cut(s) | 860 |
| BalI | TGGCCA | 1 cut(s) | 247 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 412, 444 |
| BauI | CACGAG | 1 cut(s) | 859 |
| BbsI | GAAGAC | 1 cut(s) | 579 |
| Bbv12I | GWGCWC | 1 cut(s) | 860 |
| BbvI | GCAGC | 4 cut(s) | 469, 655, 679, 944 |
| BccI | CCATC | 2 cut(s) | 376, 488 |
| BceAI | ACGGC | 1 cut(s) | 53 |
| BciT130I | CCWGG | 1 cut(s) | 737 |
| BciVI | GTATCC | 1 cut(s) | 372 |
| BcnI | CCSGG | 1 cut(s) | 378 |
| BcoDI | GTCTC | 1 cut(s) | 293 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BfuI | GTATCC | 1 cut(s) | 372 |
| BisI | GCNGC | 4 cut(s) | 458, 669, 693, 933 |
| BlsI | GCNGC | 4 cut(s) | 459, 670, 694, 934 |
| Bme1390I | CCNGG | 2 cut(s) | 378, 737 |
| BmgT120I | GGNCC | 1 cut(s) | 712 |
| BmiI | GGNNCC | 2 cut(s) | 713, 741 |
| BmrFI | CCNGG | 2 cut(s) | 378, 737 |
| BmrI | ACTGGG | 1 cut(s) | 77 |
| BmsI | GCATC | 2 cut(s) | 89, 469 |
| BmuI | ACTGGG | 1 cut(s) | 77 |
| BpiI | GAAGAC | 1 cut(s) | 579 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 34, 66 |
| BpuEI | CTTGAG | 1 cut(s) | 890 |
| BpuMI | CCSGG | 1 cut(s) | 378 |
| BsaAI | YACGTR | 1 cut(s) | 1029 |
| BsaJI | CCNNGG | 2 cut(s) | 348, 377 |
| BsaWI | WCCGGW | 2 cut(s) | 16, 490 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 215, 245 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 377 |
| Bse1I | ACTGG | 3 cut(s) | 83, 161, 472 |
| Bse3DI | GCAATG | 1 cut(s) | 371 |
| BseAI | TCCGGA | 2 cut(s) | 16, 490 |
| BseBI | CCWGG | 1 cut(s) | 737 |
| BseDI | CCNNGG | 2 cut(s) | 348, 377 |
| BseGI | GGATG | 5 cut(s) | 78, 387, 460, 477, 499 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 377 |
| BseMI | GCAATG | 1 cut(s) | 371 |
| BseMII | CTCAG | 2 cut(s) | 249, 740 |
| BseNI | ACTGG | 3 cut(s) | 83, 161, 472 |
| BseRI | GAGGAG | 1 cut(s) | 885 |
| BseSI | GKGCMC | 1 cut(s) | 860 |
| BseX3I | CGGCCG | 1 cut(s) | 38 |
| BseXI | GCAGC | 4 cut(s) | 469, 655, 679, 944 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| Bsh1236I | CGCG | 1 cut(s) | 541 |
| Bsh1285I | CGRYCG | 1 cut(s) | 41 |
| BshFI | GGCC | 5 cut(s) | 40, 247, 714, 735, 961 |
| BsiEI | CGRYCG | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 1 cut(s) | 860 |
| BsiSI | CCGG | 3 cut(s) | 17, 377, 491 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 377 |
| BsmAI | GTCTC | 1 cut(s) | 293 |
| BsmBI | CGTCTC | 1 cut(s) | 293 |
| BsnI | GGCC | 5 cut(s) | 40, 247, 714, 735, 961 |
| Bsp1286I | GDGCHC | 1 cut(s) | 860 |
| Bsp13I | TCCGGA | 2 cut(s) | 16, 490 |
| Bsp143I | GATC | 3 cut(s) | 25, 75, 761 |
| BspACI | CCGC | 2 cut(s) | 655, 723 |
| BspANI | GGCC | 5 cut(s) | 40, 247, 714, 735, 961 |
| BspCNI | CTCAG | 2 cut(s) | 250, 739 |
| BspEI | TCCGGA | 2 cut(s) | 16, 490 |
| BspFNI | CGCG | 1 cut(s) | 541 |
| BspLI | GGNNCC | 2 cut(s) | 713, 741 |
| BspPI | GGATC | 1 cut(s) | 33 |
| BsrBI | CCGCTC | 1 cut(s) | 725 |
| BsrDI | GCAATG | 1 cut(s) | 371 |
| BsrI | ACTGG | 3 cut(s) | 83, 161, 472 |
| BssECI | CCNNGG | 2 cut(s) | 348, 377 |
| BssMI | GATC | 3 cut(s) | 25, 75, 761 |
| BssSI | CACGAG | 1 cut(s) | 859 |
| Bst2BI | CACGAG | 1 cut(s) | 859 |
| Bst2UI | CCWGG | 1 cut(s) | 737 |
| Bst4CI | ACNGT | 2 cut(s) | 287, 855 |
| BstBAI | YACGTR | 1 cut(s) | 1029 |
| BstC8I | GCNNGC | 3 cut(s) | 328, 561, 716 |
| BstDEI | CTNAG | 3 cut(s) | 110, 258, 726 |
| BstDSI | CCRYGG | 1 cut(s) | 348 |
| BstEII | GGTNACC | 1 cut(s) | 281 |
| BstF5I | GGATG | 5 cut(s) | 78, 387, 460, 477, 499 |
| BstFNI | CGCG | 1 cut(s) | 541 |
| BstHHI | GCGC | 1 cut(s) | 541 |
| BstKTI | GATC | 3 cut(s) | 28, 78, 764 |
| BstMAI | GTCTC | 1 cut(s) | 293 |
| BstMBI | GATC | 3 cut(s) | 25, 75, 761 |
| BstMCI | CGRYCG | 1 cut(s) | 41 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 547, 556 |
| BstNI | CCWGG | 1 cut(s) | 737 |
| BstPI | GGTNACC | 1 cut(s) | 281 |
| BstSCI | CCNGG | 2 cut(s) | 376, 735 |
| BstSLI | GKGCMC | 1 cut(s) | 860 |
| BstSNI | TACGTA | 1 cut(s) | 1029 |
| BstUI | CGCG | 1 cut(s) | 541 |
| BstV1I | GCAGC | 4 cut(s) | 469, 655, 679, 944 |
| BstV2I | GAAGAC | 1 cut(s) | 579 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 790 |
| BstZI | CGGCCG | 1 cut(s) | 38 |
| BsuI | GTATCC | 1 cut(s) | 372 |
| BsuRI | GGCC | 5 cut(s) | 40, 247, 714, 735, 961 |
| BtgI | CCRYGG | 1 cut(s) | 348 |
| BtgZI | GCGATG | 1 cut(s) | 609 |
| BtsCI | GGATG | 5 cut(s) | 78, 387, 460, 477, 499 |
| Cac8I | GCNNGC | 3 cut(s) | 328, 561, 716 |
| CfoI | GCGC | 1 cut(s) | 541 |
| Cfr13I | GGNCC | 1 cut(s) | 712 |
| Csp6I | GTAC | 2 cut(s) | 164, 1030 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 337, 372 |
| CviAII | CATG | 1 cut(s) | 323 |
| CviQI | GTAC | 2 cut(s) | 164, 1030 |
| DdeI | CTNAG | 3 cut(s) | 110, 258, 726 |
| DpnI | GATC | 3 cut(s) | 27, 77, 763 |
| DpnII | GATC | 3 cut(s) | 25, 75, 761 |
| DraI | TTTAAA | 1 cut(s) | 628 |
| EaeI | YGGCCR | 2 cut(s) | 38, 245 |
| EagI | CGGCCG | 1 cut(s) | 38 |
| EclXI | CGGCCG | 1 cut(s) | 38 |
| Eco105I | TACGTA | 1 cut(s) | 1029 |
| Eco52I | CGGCCG | 1 cut(s) | 38 |
| Eco91I | GGTNACC | 1 cut(s) | 281 |
| EcoO109I | RGGNCCY | 1 cut(s) | 712 |
| EcoO65I | GGTNACC | 1 cut(s) | 281 |
| EcoRI | GAATTC | 1 cut(s) | 310 |
| EcoRII | CCWGG | 1 cut(s) | 735 |
| Esp3I | CGTCTC | 1 cut(s) | 293 |
| FaeI | CATG | 1 cut(s) | 326 |
| FatI | CATG | 1 cut(s) | 322 |
| Fnu4HI | GCNGC | 4 cut(s) | 458, 669, 693, 933 |
| FokI | GGATG | 5 cut(s) | 65, 394, 447, 464, 506 |
| Fsp4HI | GCNGC | 4 cut(s) | 458, 669, 693, 933 |
| FspBI | CTAG | 1 cut(s) | 96 |
| GlaI | GCGC | 1 cut(s) | 540 |
| GluI | GCNGC | 4 cut(s) | 458, 669, 693, 933 |
| HaeIII | GGCC | 5 cut(s) | 40, 247, 714, 735, 961 |
| HapII | CCGG | 3 cut(s) | 17, 377, 491 |
| HhaI | GCGC | 1 cut(s) | 541 |
| Hin1II | CATG | 1 cut(s) | 326 |
| Hin6I | GCGC | 1 cut(s) | 539 |
| HinP1I | GCGC | 1 cut(s) | 539 |
| HincII | GTYRAC | 1 cut(s) | 35 |
| HindII | GTYRAC | 1 cut(s) | 35 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HinfI | GANTC | 4 cut(s) | 115, 410, 543, 824 |
| HpaII | CCGG | 3 cut(s) | 17, 377, 491 |
| HphI | GGTGA | 2 cut(s) | 293, 873 |
| Hpy166II | GTNNAC | 3 cut(s) | 35, 133, 858 |
| Hpy188I | TCNGA | 8 cut(s) | 120, 259, 433, 585, 729, 757, 841, 917 |
| Hpy188III | TCNNGA | 7 cut(s) | 17, 73, 96, 491, 765, 791, 907 |
| Hpy8I | GTNNAC | 3 cut(s) | 35, 133, 858 |
| HpyAV | CCTTC | 3 cut(s) | 299, 438, 491 |
| HpyCH4III | ACNGT | 2 cut(s) | 287, 855 |
| HpyCH4IV | ACGT | 1 cut(s) | 1028 |
| HpyCH4V | TGCA | 8 cut(s) | 102, 188, 330, 671, 695, 858, 945, 992 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 547, 556 |
| HpyF3I | CTNAG | 3 cut(s) | 110, 258, 726 |
| HpySE526I | ACGT | 1 cut(s) | 1028 |
| Hsp92II | CATG | 1 cut(s) | 326 |
| HspAI | GCGC | 1 cut(s) | 539 |
| Kpn2I | TCCGGA | 2 cut(s) | 16, 490 |
| Kzo9I | GATC | 3 cut(s) | 25, 75, 761 |
| LmnI | GCTCC | 2 cut(s) | 683, 785 |
| Lsp1109I | GCAGC | 4 cut(s) | 469, 655, 679, 944 |
| LweI | GCATC | 2 cut(s) | 89, 469 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 1028 |
| MaeIII | GTNAC | 3 cut(s) | 205, 281, 1024 |
| MalI | GATC | 3 cut(s) | 27, 77, 763 |
| MbiI | CCGCTC | 1 cut(s) | 725 |
| MboI | GATC | 3 cut(s) | 25, 75, 761 |
| MboII | GAAGA | 7 cut(s) | 133, 398, 410, 510, 584, 678, 821 |
| MhlI | GDGCHC | 1 cut(s) | 860 |
| MlsI | TGGCCA | 1 cut(s) | 247 |
| MluCI | AATT | 8 cut(s) | 125, 310, 317, 515, 630, 672, 986, 1018 |
| MluNI | TGGCCA | 1 cut(s) | 247 |
| MlyI | GAGTC | 1 cut(s) | 818 |
| MmeI | TCCRAC | 1 cut(s) | 488 |
| MnlI | CCTC | 7 cut(s) | 217, 438, 725, 814, 901, 906, 987 |
| Mox20I | TGGCCA | 1 cut(s) | 247 |
| MroI | TCCGGA | 2 cut(s) | 16, 490 |
| MscI | TGGCCA | 1 cut(s) | 247 |
| MseI | TTAA | 3 cut(s) | 513, 618, 627 |
| MslI | CAYNNNNRTG | 1 cut(s) | 97 |
| Msp20I | TGGCCA | 1 cut(s) | 247 |
| MspI | CCGG | 3 cut(s) | 17, 377, 491 |
| MspR9I | CCNGG | 2 cut(s) | 378, 737 |
| MvaI | CCWGG | 1 cut(s) | 737 |
| MvnI | CGCG | 1 cut(s) | 541 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 547, 556 |
| NciI | CCSGG | 1 cut(s) | 378 |
| NdeII | GATC | 3 cut(s) | 25, 75, 761 |
| NlaIII | CATG | 1 cut(s) | 326 |
| NlaIV | GGNNCC | 2 cut(s) | 713, 741 |
| NmeAIII | GCCGAG | 1 cut(s) | 66 |
| NmuCI | GTSAC | 2 cut(s) | 205, 281 |
| PfeI | GAWTC | 3 cut(s) | 115, 410, 543 |
| PkrI | GCNGC | 4 cut(s) | 459, 670, 694, 934 |
| PleI | GAGTC | 1 cut(s) | 818 |
| PpsI | GAGTC | 1 cut(s) | 818 |
| Ppu21I | YACGTR | 1 cut(s) | 1029 |
| Psp6I | CCWGG | 1 cut(s) | 735 |
| PspEI | GGTNACC | 1 cut(s) | 281 |
| PspGI | CCWGG | 1 cut(s) | 735 |
| PspN4I | GGNNCC | 2 cut(s) | 713, 741 |
| PspPI | GGNCC | 1 cut(s) | 712 |
| RsaI | GTAC | 2 cut(s) | 165, 1031 |
| RsaNI | GTAC | 2 cut(s) | 164, 1030 |
| RseI | CAYNNNNRTG | 1 cut(s) | 97 |
| SaqAI | TTAA | 3 cut(s) | 513, 618, 627 |
| SatI | GCNGC | 4 cut(s) | 458, 669, 693, 933 |
| Sau3AI | GATC | 3 cut(s) | 25, 75, 761 |
| Sau96I | GGNCC | 1 cut(s) | 712 |
| SchI | GAGTC | 1 cut(s) | 818 |
| ScrFI | CCNGG | 2 cut(s) | 378, 737 |
| SduI | GDGCHC | 1 cut(s) | 860 |
| SetI | ASST | 9 cut(s) | 47, 177, 228, 449, 670, 782, 802, 979, 1031 |
| SfaNI | GCATC | 2 cut(s) | 89, 469 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 97 |
| SmlI | CTYRAG | 1 cut(s) | 905 |
| SmoI | CTYRAG | 1 cut(s) | 905 |
| SnaBI | TACGTA | 1 cut(s) | 1029 |
| Sse9I | AATT | 8 cut(s) | 125, 310, 317, 515, 630, 672, 986, 1018 |
| SsiI | CCGC | 2 cut(s) | 655, 723 |
| SspMI | CTAG | 1 cut(s) | 96 |
| StyD4I | CCNGG | 2 cut(s) | 376, 735 |
| TaaI | ACNGT | 2 cut(s) | 287, 855 |
| TaiI | ACGT | 1 cut(s) | 1031 |
| TaqI | TCGA | 3 cut(s) | 201, 298, 484 |
| TasI | AATT | 8 cut(s) | 125, 310, 317, 515, 630, 672, 986, 1018 |
| TatI | WGTACW | 1 cut(s) | 163 |
| TfiI | GAWTC | 3 cut(s) | 115, 410, 543 |
| Tru1I | TTAA | 3 cut(s) | 513, 618, 627 |
| Tru9I | TTAA | 3 cut(s) | 513, 618, 627 |
| TseFI | GTSAC | 2 cut(s) | 205, 281 |
| TseI | GCWGC | 4 cut(s) | 457, 668, 692, 932 |
| Tsp45I | GTSAC | 2 cut(s) | 205, 281 |
| TspDTI | ATGAA | 6 cut(s) | 318, 411, 423, 540, 822, 828 |
| VneI | GTGCAC | 1 cut(s) | 856 |
| XapI | RAATTY | 6 cut(s) | 125, 310, 317, 515, 986, 1018 |
| XbaI | TCTAGA | 1 cut(s) | 95 |
| XspI | CTAG | 1 cut(s) | 96 |