B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1705 |
| AciI | CCGC | 2 cut(s) | 805, 1069 |
| AclI | AACGTT | 1 cut(s) | 704 |
| AclWI | GGATC | 2 cut(s) | 62, 98 |
| AcoI | YGGCCR | 1 cut(s) | 254 |
| AcsI | RAATTY | 9 cut(s) | 134, 166, 319, 535, 926, 1310, 1391, 1555, 1831 |
| AcuI | CTGAAG | 3 cut(s) | 1059, 1451, 1734 |
| AfeI | AGCGCT | 1 cut(s) | 742 |
| AflIII | ACRYGT | 1 cut(s) | 719 |
| AjnI | CCWGG | 2 cut(s) | 297, 726 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1297, 1329 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1578, 1610 |
| AluBI | AGCT | 8 cut(s) | 184, 749, 761, 953, 1082, 1223, 1336, 1445 |
| AluI | AGCT | 8 cut(s) | 184, 749, 761, 953, 1082, 1223, 1336, 1445 |
| Alw26I | GTCTC | 1 cut(s) | 477 |
| AlwI | GGATC | 2 cut(s) | 62, 98 |
| Aor51HI | AGCGCT | 1 cut(s) | 742 |
| AoxI | GGCC | 3 cut(s) | 254, 806, 1727 |
| ApeKI | GCWGC | 4 cut(s) | 738, 871, 1267, 1336 |
| ApoI | RAATTY | 9 cut(s) | 134, 166, 319, 535, 926, 1310, 1391, 1555, 1831 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1141, 1796 |
| AspLEI | GCGC | 1 cut(s) | 743 |
| AspS9I | GGNCC | 2 cut(s) | 807, 1664 |
| AsuHPI | GGTGA | 3 cut(s) | 130, 716, 1487 |
| AvaII | GGWCC | 1 cut(s) | 1664 |
| BalI | TGGCCA | 1 cut(s) | 256 |
| BanII | GRGCYC | 1 cut(s) | 1423 |
| BbvI | GCAGC | 4 cut(s) | 750, 883, 1279, 1323 |
| BccI | CCATC | 7 cut(s) | 87, 662, 899, 1124, 1361, 1364, 1570 |
| BceAI | ACGGC | 1 cut(s) | 386 |
| BciT130I | CCWGG | 2 cut(s) | 299, 728 |
| BciVI | GTATCC | 1 cut(s) | 808 |
| BclI | TGATCA | 1 cut(s) | 1402 |
| BcoDI | GTCTC | 1 cut(s) | 477 |
| BfaI | CTAG | 6 cut(s) | 21, 75, 281, 746, 1146, 1838 |
| BfmI | CTRYAG | 2 cut(s) | 657, 1620 |
| BfoI | RGCGCY | 1 cut(s) | 744 |
| BfuAI | ACCTGC | 1 cut(s) | 1705 |
| BfuI | GTATCC | 1 cut(s) | 808 |
| BglII | AGATCT | 1 cut(s) | 157 |
| BisI | GCNGC | 5 cut(s) | 739, 806, 872, 1268, 1337 |
| BlsI | GCNGC | 5 cut(s) | 740, 807, 873, 1269, 1338 |
| Bme1390I | CCNGG | 2 cut(s) | 299, 728 |
| Bme18I | GGWCC | 1 cut(s) | 1664 |
| BmgT120I | GGNCC | 2 cut(s) | 807, 1664 |
| BmiI | GGNNCC | 1 cut(s) | 1666 |
| BmrFI | CCNGG | 2 cut(s) | 299, 728 |
| BmrI | ACTGGG | 1 cut(s) | 1819 |
| BmsI | GCATC | 2 cut(s) | 212, 1515 |
| BmuI | ACTGGG | 1 cut(s) | 1819 |
| BpmI | CTGGAG | 2 cut(s) | 83, 702 |
| BpuEI | CTTGAG | 2 cut(s) | 593, 1399 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1758 |
| BsaJI | CCNNGG | 1 cut(s) | 810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1578, 1608 |
| Bse1I | ACTGG | 2 cut(s) | 685, 1825 |
| Bse3DI | GCAATG | 1 cut(s) | 1347 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1758 |
| BseBI | CCWGG | 2 cut(s) | 299, 728 |
| BseDI | CCNNGG | 1 cut(s) | 810 |
| BseGI | GGATG | 5 cut(s) | 910, 978, 1197, 1353, 1375 |
| BseJI | GATNNNNATC | 1 cut(s) | 1758 |
| BseMI | GCAATG | 1 cut(s) | 1347 |
| BseMII | CTCAG | 1 cut(s) | 1206 |
| BseNI | ACTGG | 2 cut(s) | 685, 1825 |
| BseRI | GAGGAG | 1 cut(s) | 1599 |
| BseXI | GCAGC | 4 cut(s) | 750, 883, 1279, 1323 |
| BseYI | CCCAGC | 1 cut(s) | 449 |
| BsgI | GTGCAG | 2 cut(s) | 589, 1733 |
| BshFI | GGCC | 3 cut(s) | 256, 808, 1729 |
| BslFI | GGGAC | 3 cut(s) | 1469, 1650, 1807 |
| BsmAI | GTCTC | 1 cut(s) | 477 |
| BsmFI | GGGAC | 3 cut(s) | 1469, 1650, 1807 |
| BsmI | GAATGC | 2 cut(s) | 471, 1646 |
| BsnI | GGCC | 3 cut(s) | 256, 808, 1729 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1423 |
| Bsp143I | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| BspACI | CCGC | 2 cut(s) | 805, 1069 |
| BspANI | GGCC | 3 cut(s) | 256, 808, 1729 |
| BspCNI | CTCAG | 1 cut(s) | 1207 |
| BspHI | TCATGA | 1 cut(s) | 1177 |
| BspLI | GGNNCC | 1 cut(s) | 1666 |
| BspMAI | CTGCAG | 2 cut(s) | 661, 1624 |
| BspMI | ACCTGC | 1 cut(s) | 1705 |
| BspPI | GGATC | 2 cut(s) | 62, 98 |
| BspQI | GCTCTTC | 1 cut(s) | 756 |
| BsrDI | GCAATG | 1 cut(s) | 1347 |
| BsrI | ACTGG | 2 cut(s) | 685, 1825 |
| BssECI | CCNNGG | 1 cut(s) | 810 |
| BssMI | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| Bst2UI | CCWGG | 2 cut(s) | 299, 728 |
| Bst4CI | ACNGT | 1 cut(s) | 1869 |
| Bst6I | CTCTTC | 3 cut(s) | 15, 756, 1279 |
| BstC8I | GCNNGC | 2 cut(s) | 1341, 1345 |
| BstDEI | CTNAG | 1 cut(s) | 1215 |
| BstF5I | GGATG | 5 cut(s) | 910, 978, 1197, 1353, 1375 |
| BstH2I | RGCGCY | 1 cut(s) | 744 |
| BstHHI | GCGC | 1 cut(s) | 743 |
| BstKTI | GATC | 4 cut(s) | 57, 106, 160, 1405 |
| BstMAI | GTCTC | 1 cut(s) | 477 |
| BstMBI | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 577, 693, 1349 |
| BstNI | CCWGG | 2 cut(s) | 299, 728 |
| BstNSI | RCATGY | 3 cut(s) | 571, 723, 1822 |
| BstSCI | CCNGG | 2 cut(s) | 297, 726 |
| BstSFI | CTRYAG | 2 cut(s) | 657, 1620 |
| BstV1I | GCAGC | 4 cut(s) | 750, 883, 1279, 1323 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 114, 734 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BsuI | GTATCC | 1 cut(s) | 808 |
| BsuRI | GGCC | 3 cut(s) | 256, 808, 1729 |
| BtgZI | GCGATG | 2 cut(s) | 1023, 1548 |
| BtsCI | GGATG | 5 cut(s) | 910, 978, 1197, 1353, 1375 |
| BtsI | GCAGTG | 1 cut(s) | 601 |
| BtsIMutI | CAGTG | 2 cut(s) | 601, 678 |
| BveI | ACCTGC | 1 cut(s) | 1705 |
| Cac8I | GCNNGC | 2 cut(s) | 1341, 1345 |
| CciI | TCATGA | 1 cut(s) | 1177 |
| CfoI | GCGC | 1 cut(s) | 743 |
| Cfr13I | GGNCC | 2 cut(s) | 807, 1664 |
| CsiI | ACCWGGT | 1 cut(s) | 726 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 346, 381 |
| DdeI | CTNAG | 1 cut(s) | 1215 |
| DpnI | GATC | 4 cut(s) | 56, 105, 159, 1404 |
| DpnII | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| EaeI | YGGCCR | 1 cut(s) | 254 |
| Eam1104I | CTCTTC | 3 cut(s) | 15, 756, 1279 |
| EarI | CTCTTC | 3 cut(s) | 15, 756, 1279 |
| Eco147I | AGGCCT | 1 cut(s) | 1729 |
| Eco24I | GRGCYC | 1 cut(s) | 1423 |
| Eco32I | GATATC | 1 cut(s) | 1325 |
| Eco47I | GGWCC | 1 cut(s) | 1664 |
| Eco47III | AGCGCT | 1 cut(s) | 742 |
| Eco57I | CTGAAG | 3 cut(s) | 1059, 1451, 1734 |
| EcoRI | GAATTC | 2 cut(s) | 319, 926 |
| EcoRII | CCWGG | 2 cut(s) | 297, 726 |
| EcoRV | GATATC | 1 cut(s) | 1325 |
| EcoT38I | GRGCYC | 1 cut(s) | 1423 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1717, 1749, 1781, 1813 |
| FaqI | GGGAC | 3 cut(s) | 1469, 1650, 1807 |
| FbaI | TGATCA | 1 cut(s) | 1402 |
| Fnu4HI | GCNGC | 5 cut(s) | 739, 806, 872, 1268, 1337 |
| FokI | GGATG | 5 cut(s) | 917, 985, 1204, 1340, 1382 |
| FriOI | GRGCYC | 1 cut(s) | 1423 |
| Fsp4HI | GCNGC | 5 cut(s) | 739, 806, 872, 1268, 1337 |
| FspBI | CTAG | 6 cut(s) | 21, 75, 281, 746, 1146, 1838 |
| GlaI | GCGC | 1 cut(s) | 742 |
| GluI | GCNGC | 5 cut(s) | 739, 806, 872, 1268, 1337 |
| GsaI | CCCAGC | 1 cut(s) | 453 |
| GsuI | CTGGAG | 2 cut(s) | 83, 702 |
| HaeII | RGCGCY | 1 cut(s) | 744 |
| HaeIII | GGCC | 3 cut(s) | 256, 808, 1729 |
| HhaI | GCGC | 1 cut(s) | 743 |
| Hin6I | GCGC | 1 cut(s) | 741 |
| HinP1I | GCGC | 1 cut(s) | 741 |
| HindIII | AAGCTT | 1 cut(s) | 182 |
| HinfI | GANTC | 6 cut(s) | 596, 675, 957, 1158, 1425, 1792 |
| HphI | GGTGA | 3 cut(s) | 130, 716, 1487 |
| Hpy166II | GTNNAC | 1 cut(s) | 278 |
| Hpy188III | TCNNGA | 8 cut(s) | 52, 62, 75, 1027, 1178, 1429, 1679, 1763 |
| Hpy8I | GTNNAC | 1 cut(s) | 278 |
| HpyAV | CCTTC | 9 cut(s) | 241, 308, 979, 1240, 1257, 1367, 1426, 1740, 1807 |
| HpyCH4III | ACNGT | 1 cut(s) | 1869 |
| HpyCH4IV | ACGT | 2 cut(s) | 704, 977 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 577, 693, 1349 |
| HpyF3I | CTNAG | 1 cut(s) | 1215 |
| HpySE526I | ACGT | 2 cut(s) | 704, 977 |
| HspAI | GCGC | 1 cut(s) | 741 |
| Ksp22I | TGATCA | 1 cut(s) | 1402 |
| Kzo9I | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| LguI | GCTCTTC | 1 cut(s) | 756 |
| Lsp1109I | GCAGC | 4 cut(s) | 750, 883, 1279, 1323 |
| LweI | GCATC | 2 cut(s) | 212, 1515 |
| MabI | ACCWGGT | 1 cut(s) | 726 |
| MaeI | CTAG | 6 cut(s) | 21, 75, 281, 746, 1146, 1838 |
| MaeII | ACGT | 2 cut(s) | 704, 977 |
| MaeIII | GTNAC | 5 cut(s) | 563, 676, 722, 881, 1717 |
| MalI | GATC | 4 cut(s) | 56, 105, 159, 1404 |
| MboI | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| MfeI | CAATTG | 1 cut(s) | 1202 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MhlI | GDGCHC | 1 cut(s) | 1423 |
| MlsI | TGGCCA | 1 cut(s) | 256 |
| MluNI | TGGCCA | 1 cut(s) | 256 |
| MlyI | GAGTC | 2 cut(s) | 684, 1419 |
| MmeI | TCCRAC | 1 cut(s) | 1142 |
| Mox20I | TGGCCA | 1 cut(s) | 256 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1141, 1796 |
| MscI | TGGCCA | 1 cut(s) | 256 |
| MslI | CAYNNNNRTG | 3 cut(s) | 112, 330, 481 |
| Msp20I | TGGCCA | 1 cut(s) | 256 |
| MspR9I | CCNGG | 2 cut(s) | 299, 728 |
| MunI | CAATTG | 1 cut(s) | 1202 |
| Mva1269I | GAATGC | 2 cut(s) | 471, 1646 |
| MvaI | CCWGG | 2 cut(s) | 299, 728 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 577, 693, 1349 |
| NdeII | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| NlaIV | GGNNCC | 1 cut(s) | 1666 |
| NmuCI | GTSAC | 3 cut(s) | 563, 676, 722 |
| NspI | RCATGY | 3 cut(s) | 571, 723, 1822 |
| PagI | TCATGA | 1 cut(s) | 1177 |
| PceI | AGGCCT | 1 cut(s) | 1729 |
| PciI | ACATGT | 1 cut(s) | 719 |
| PciSI | GCTCTTC | 1 cut(s) | 756 |
| PctI | GAATGC | 2 cut(s) | 471, 1646 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1141, 1796 |
| PfeI | GAWTC | 4 cut(s) | 596, 957, 1158, 1792 |
| PkrI | GCNGC | 5 cut(s) | 740, 807, 873, 1269, 1338 |
| PleI | GAGTC | 2 cut(s) | 683, 1419 |
| PpsI | GAGTC | 2 cut(s) | 683, 1419 |
| PscI | ACATGT | 1 cut(s) | 719 |
| Psp1406I | AACGTT | 1 cut(s) | 704 |
| Psp6I | CCWGG | 2 cut(s) | 297, 726 |
| PspFI | CCCAGC | 1 cut(s) | 449 |
| PspGI | CCWGG | 2 cut(s) | 297, 726 |
| PspN4I | GGNNCC | 1 cut(s) | 1666 |
| PspPI | GGNCC | 2 cut(s) | 807, 1664 |
| PstI | CTGCAG | 2 cut(s) | 661, 1624 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| RseI | CAYNNNNRTG | 3 cut(s) | 112, 330, 481 |
| SapI | GCTCTTC | 1 cut(s) | 756 |
| SatI | GCNGC | 5 cut(s) | 739, 806, 872, 1268, 1337 |
| Sau3AI | GATC | 4 cut(s) | 54, 103, 157, 1402 |
| Sau96I | GGNCC | 2 cut(s) | 807, 1664 |
| SchI | GAGTC | 2 cut(s) | 684, 1419 |
| ScrFI | CCNGG | 2 cut(s) | 299, 728 |
| SduI | GDGCHC | 1 cut(s) | 1423 |
| SexAI | ACCWGGT | 1 cut(s) | 726 |
| SfaNI | GCATC | 2 cut(s) | 212, 1515 |
| SfcI | CTRYAG | 2 cut(s) | 657, 1620 |
| SinI | GGWCC | 1 cut(s) | 1664 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 112, 330, 481 |
| SmlI | CTYRAG | 2 cut(s) | 572, 1414 |
| SmoI | CTYRAG | 2 cut(s) | 572, 1414 |
| SseBI | AGGCCT | 1 cut(s) | 1729 |
| SsiI | CCGC | 2 cut(s) | 805, 1069 |
| SspMI | CTAG | 6 cut(s) | 21, 75, 281, 746, 1146, 1838 |
| StuI | AGGCCT | 1 cut(s) | 1729 |
| StyD4I | CCNGG | 2 cut(s) | 297, 726 |
| TaaI | ACNGT | 1 cut(s) | 1869 |
| TaiI | ACGT | 2 cut(s) | 707, 980 |
| TaqI | TCGA | 4 cut(s) | 955, 1423, 1509, 1787 |
| TauI | GCSGC | 1 cut(s) | 808 |
| TfiI | GAWTC | 4 cut(s) | 596, 957, 1158, 1792 |
| TscAI | CASTG | 2 cut(s) | 608, 685 |
| TseFI | GTSAC | 3 cut(s) | 563, 676, 722 |
| TseI | GCWGC | 4 cut(s) | 738, 871, 1267, 1336 |
| Tsp45I | GTSAC | 3 cut(s) | 563, 676, 722 |
| TspDTI | ATGAA | 9 cut(s) | 158, 327, 548, 781, 1211, 1323, 1346, 1725, 1836 |
| TspRI | CASTG | 2 cut(s) | 608, 685 |
| VpaK11BI | GGWCC | 1 cut(s) | 1664 |
| XapI | RAATTY | 9 cut(s) | 134, 166, 319, 535, 926, 1310, 1391, 1555, 1831 |
| XbaI | TCTAGA | 1 cut(s) | 74 |
| XceI | RCATGY | 3 cut(s) | 571, 723, 1822 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1141, 1796 |
| XspI | CTAG | 6 cut(s) | 21, 75, 281, 746, 1146, 1838 |