B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 832 |
| AccIII | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| AciI | CCGC | 3 cut(s) | 295, 830, 1060 |
| AcoI | YGGCCR | 4 cut(s) | 35, 242, 886, 1061 |
| AcsI | RAATTY | 6 cut(s) | 122, 248, 307, 314, 521, 716 |
| AcuI | CTGAAG | 2 cut(s) | 569, 954 |
| AfaI | GTAC | 1 cut(s) | 1086 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 698, 1059 |
| AflII | CTTAAG | 1 cut(s) | 167 |
| AflIII | ACRYGT | 1 cut(s) | 945 |
| AluBI | AGCT | 8 cut(s) | 89, 172, 537, 581, 1013, 1075, 1136, 1279 |
| AluI | AGCT | 8 cut(s) | 89, 172, 537, 581, 1013, 1075, 1136, 1279 |
| Alw21I | GWGCWC | 1 cut(s) | 34 |
| Alw26I | GTCTC | 1 cut(s) | 273 |
| Alw44I | GTGCAC | 1 cut(s) | 30 |
| Aor13HI | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| AoxI | GGCC | 7 cut(s) | 35, 242, 886, 905, 977, 1061, 1160 |
| ApaLI | GTGCAC | 1 cut(s) | 30 |
| ApeKI | GCWGC | 3 cut(s) | 637, 1013, 1133 |
| ApoI | RAATTY | 6 cut(s) | 122, 248, 307, 314, 521, 716 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 212, 244 |
| AseI | ATTAAT | 1 cut(s) | 882 |
| AsuHPI | GGTGA | 2 cut(s) | 230, 806 |
| BaeGI | GKGCMC | 1 cut(s) | 34 |
| Bbv12I | GWGCWC | 1 cut(s) | 34 |
| BbvI | GCAGC | 3 cut(s) | 649, 1000, 1145 |
| BccI | CCATC | 3 cut(s) | 686, 689, 1075 |
| BceAI | ACGGC | 1 cut(s) | 50 |
| BciVI | GTATCC | 1 cut(s) | 369 |
| BcoDI | GTCTC | 1 cut(s) | 273 |
| BfaI | CTAG | 2 cut(s) | 93, 287 |
| BfmI | CTRYAG | 1 cut(s) | 576 |
| BfrI | CTTAAG | 1 cut(s) | 167 |
| BfuI | GTATCC | 1 cut(s) | 369 |
| BisI | GCNGC | 4 cut(s) | 638, 1014, 1061, 1134 |
| BlsI | GCNGC | 4 cut(s) | 639, 1015, 1062, 1135 |
| BmsI | GCATC | 3 cut(s) | 559, 581, 624 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 248, 280 |
| BsaJI | CCNNGG | 2 cut(s) | 345, 856 |
| BsaWI | WCCGGW | 4 cut(s) | 16, 115, 373, 691 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 341, 371 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 698, 1059 |
| Bse118I | RCCGGY | 1 cut(s) | 888 |
| Bse1I | ACTGG | 1 cut(s) | 673 |
| BseAI | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| BseDI | CCNNGG | 2 cut(s) | 345, 856 |
| BseGI | GGATG | 4 cut(s) | 550, 678, 700, 1067 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 698, 1059 |
| BseMII | CTCAG | 1 cut(s) | 246 |
| BseNI | ACTGG | 1 cut(s) | 673 |
| BseSI | GKGCMC | 1 cut(s) | 34 |
| BseXI | GCAGC | 3 cut(s) | 649, 1000, 1145 |
| BshFI | GGCC | 7 cut(s) | 37, 244, 888, 907, 979, 1063, 1162 |
| BsiHKAI | GWGCWC | 1 cut(s) | 34 |
| BsiSI | CCGG | 6 cut(s) | 17, 116, 245, 374, 692, 889 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 698, 1059 |
| BsmAI | GTCTC | 1 cut(s) | 273 |
| BsnI | GGCC | 7 cut(s) | 37, 244, 888, 907, 979, 1063, 1162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 34 |
| Bsp13I | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| Bsp143I | GATC | 2 cut(s) | 25, 72 |
| BspACI | CCGC | 3 cut(s) | 295, 830, 1060 |
| BspANI | GGCC | 7 cut(s) | 37, 244, 888, 907, 979, 1063, 1162 |
| BspCNI | CTCAG | 1 cut(s) | 247 |
| BspEI | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| BspQI | GCTCTTC | 3 cut(s) | 544, 588, 1143 |
| BspTI | CTTAAG | 1 cut(s) | 167 |
| BsrBI | CCGCTC | 1 cut(s) | 832 |
| BsrFI | RCCGGY | 1 cut(s) | 888 |
| BsrI | ACTGG | 1 cut(s) | 673 |
| BssAI | RCCGGY | 1 cut(s) | 888 |
| BssECI | CCNNGG | 2 cut(s) | 345, 856 |
| BssMI | GATC | 2 cut(s) | 25, 72 |
| Bst4CI | ACNGT | 2 cut(s) | 857, 1057 |
| Bst6I | CTCTTC | 4 cut(s) | 15, 544, 588, 1143 |
| BstAFI | CTTAAG | 1 cut(s) | 167 |
| BstC8I | GCNNGC | 2 cut(s) | 762, 890 |
| BstDEI | CTNAG | 2 cut(s) | 107, 255 |
| BstDSI | CCRYGG | 2 cut(s) | 345, 856 |
| BstEII | GGTNACC | 1 cut(s) | 967 |
| BstF5I | GGATG | 4 cut(s) | 550, 678, 700, 1067 |
| BstKTI | GATC | 2 cut(s) | 28, 75 |
| BstMAI | GTCTC | 1 cut(s) | 273 |
| BstMBI | GATC | 2 cut(s) | 25, 72 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1097, 1159 |
| BstNSI | RCATGY | 3 cut(s) | 896, 949, 1085 |
| BstPI | GGTNACC | 1 cut(s) | 967 |
| BstSFI | CTRYAG | 1 cut(s) | 576 |
| BstSLI | GKGCMC | 1 cut(s) | 34 |
| BstV1I | GCAGC | 3 cut(s) | 649, 1000, 1145 |
| BsuI | GTATCC | 1 cut(s) | 369 |
| BsuRI | GGCC | 7 cut(s) | 37, 244, 888, 907, 979, 1063, 1162 |
| BtgI | CCRYGG | 2 cut(s) | 345, 856 |
| BtsCI | GGATG | 4 cut(s) | 550, 678, 700, 1067 |
| BtsIMutI | CAGTG | 1 cut(s) | 1053 |
| Cac8I | GCNNGC | 2 cut(s) | 762, 890 |
| Cfr10I | RCCGGY | 1 cut(s) | 888 |
| Csp6I | GTAC | 1 cut(s) | 1085 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 334, 369 |
| CviAII | CATG | 7 cut(s) | 320, 471, 487, 893, 946, 984, 1082 |
| CviQI | GTAC | 1 cut(s) | 1085 |
| DdeI | CTNAG | 2 cut(s) | 107, 255 |
| DpnI | GATC | 2 cut(s) | 27, 74 |
| DpnII | GATC | 2 cut(s) | 25, 72 |
| EaeI | YGGCCR | 4 cut(s) | 35, 242, 886, 1061 |
| Eam1104I | CTCTTC | 4 cut(s) | 15, 544, 588, 1143 |
| EarI | CTCTTC | 4 cut(s) | 15, 544, 588, 1143 |
| Eco147I | AGGCCT | 2 cut(s) | 907, 979 |
| Eco57I | CTGAAG | 2 cut(s) | 569, 954 |
| Eco91I | GGTNACC | 1 cut(s) | 967 |
| EcoO65I | GGTNACC | 1 cut(s) | 967 |
| EcoRI | GAATTC | 2 cut(s) | 248, 307 |
| EcoT22I | ATGCAT | 2 cut(s) | 596, 1083 |
| FaeI | CATG | 7 cut(s) | 323, 474, 490, 896, 949, 987, 1085 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 493, 525, 605, 637 |
| FatI | CATG | 7 cut(s) | 319, 470, 486, 892, 945, 983, 1081 |
| FauNDI | CATATG | 1 cut(s) | 724 |
| Fnu4HI | GCNGC | 4 cut(s) | 638, 1014, 1061, 1134 |
| FokI | GGATG | 4 cut(s) | 537, 665, 707, 1054 |
| Fsp4HI | GCNGC | 4 cut(s) | 638, 1014, 1061, 1134 |
| FspBI | CTAG | 2 cut(s) | 93, 287 |
| GluI | GCNGC | 4 cut(s) | 638, 1014, 1061, 1134 |
| HaeIII | GGCC | 7 cut(s) | 37, 244, 888, 907, 979, 1063, 1162 |
| HapII | CCGG | 6 cut(s) | 17, 116, 245, 374, 692, 889 |
| Hin1II | CATG | 7 cut(s) | 323, 474, 490, 896, 949, 987, 1085 |
| HindIII | AAGCTT | 2 cut(s) | 87, 170 |
| HinfI | GANTC | 4 cut(s) | 112, 281, 407, 789 |
| HpaII | CCGG | 6 cut(s) | 17, 116, 245, 374, 692, 889 |
| HphI | GGTGA | 2 cut(s) | 230, 806 |
| Hpy166II | GTNNAC | 1 cut(s) | 32 |
| Hpy188I | TCNGA | 9 cut(s) | 81, 256, 527, 588, 610, 903, 934, 1148, 1322 |
| Hpy8I | GTNNAC | 1 cut(s) | 32 |
| HpyAV | CCTTC | 5 cut(s) | 296, 421, 985, 990, 1250 |
| HpyCH4III | ACNGT | 2 cut(s) | 857, 1057 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1097, 1159 |
| HpyF3I | CTNAG | 2 cut(s) | 107, 255 |
| Hsp92II | CATG | 7 cut(s) | 323, 474, 490, 896, 949, 987, 1085 |
| Kpn2I | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| KroI | GCCGGC | 1 cut(s) | 888 |
| KroNI | GCCGGC | 1 cut(s) | 890 |
| Kzo9I | GATC | 2 cut(s) | 25, 72 |
| LguI | GCTCTTC | 3 cut(s) | 544, 588, 1143 |
| Lsp1109I | GCAGC | 3 cut(s) | 649, 1000, 1145 |
| LweI | GCATC | 3 cut(s) | 559, 581, 624 |
| MaeI | CTAG | 2 cut(s) | 93, 287 |
| MaeIII | GTNAC | 4 cut(s) | 218, 363, 967, 1178 |
| MalI | GATC | 2 cut(s) | 27, 74 |
| MbiI | CCGCTC | 1 cut(s) | 832 |
| MboI | GATC | 2 cut(s) | 25, 72 |
| MboII | GAAGA | 8 cut(s) | 5, 395, 407, 501, 531, 575, 889, 1130 |
| MfeI | CAATTG | 1 cut(s) | 1154 |
| MhlI | GDGCHC | 1 cut(s) | 34 |
| MlyI | GAGTC | 2 cut(s) | 275, 798 |
| MmeI | TCCRAC | 1 cut(s) | 1126 |
| Mph1103I | ATGCAT | 2 cut(s) | 596, 1083 |
| MroI | TCCGGA | 4 cut(s) | 16, 115, 373, 691 |
| MroNI | GCCGGC | 1 cut(s) | 888 |
| MseI | TTAA | 6 cut(s) | 168, 714, 819, 882, 1109, 1167 |
| MspCI | CTTAAG | 1 cut(s) | 167 |
| MspI | CCGG | 6 cut(s) | 17, 116, 245, 374, 692, 889 |
| MunI | CAATTG | 1 cut(s) | 1154 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1097, 1159 |
| NaeI | GCCGGC | 1 cut(s) | 890 |
| NdeI | CATATG | 1 cut(s) | 724 |
| NdeII | GATC | 2 cut(s) | 25, 72 |
| NgoMIV | GCCGGC | 1 cut(s) | 888 |
| NlaIII | CATG | 7 cut(s) | 323, 474, 490, 896, 949, 987, 1085 |
| NmeAIII | GCCGAG | 1 cut(s) | 1117 |
| NmuCI | GTSAC | 1 cut(s) | 218 |
| NsiI | ATGCAT | 2 cut(s) | 596, 1083 |
| NspI | RCATGY | 3 cut(s) | 896, 949, 1085 |
| PceI | AGGCCT | 2 cut(s) | 907, 979 |
| PciI | ACATGT | 1 cut(s) | 945 |
| PciSI | GCTCTTC | 3 cut(s) | 544, 588, 1143 |
| PdiI | GCCGGC | 1 cut(s) | 890 |
| PfeI | GAWTC | 2 cut(s) | 112, 407 |
| PkrI | GCNGC | 4 cut(s) | 639, 1015, 1062, 1135 |
| PleI | GAGTC | 2 cut(s) | 275, 797 |
| PpsI | GAGTC | 2 cut(s) | 275, 797 |
| PscI | ACATGT | 1 cut(s) | 945 |
| PshBI | ATTAAT | 1 cut(s) | 882 |
| PspEI | GGTNACC | 1 cut(s) | 967 |
| RsaI | GTAC | 1 cut(s) | 1086 |
| RsaNI | GTAC | 1 cut(s) | 1085 |
| SapI | GCTCTTC | 3 cut(s) | 544, 588, 1143 |
| SaqAI | TTAA | 6 cut(s) | 168, 714, 819, 882, 1109, 1167 |
| SatI | GCNGC | 4 cut(s) | 638, 1014, 1061, 1134 |
| Sau3AI | GATC | 2 cut(s) | 25, 72 |
| SchI | GAGTC | 2 cut(s) | 275, 798 |
| SduI | GDGCHC | 1 cut(s) | 34 |
| SfaNI | GCATC | 3 cut(s) | 559, 581, 624 |
| SfcI | CTRYAG | 1 cut(s) | 576 |
| SmlI | CTYRAG | 1 cut(s) | 167 |
| SmoI | CTYRAG | 1 cut(s) | 167 |
| SseBI | AGGCCT | 2 cut(s) | 907, 979 |
| SsiI | CCGC | 3 cut(s) | 295, 830, 1060 |
| SspMI | CTAG | 2 cut(s) | 93, 287 |
| StuI | AGGCCT | 2 cut(s) | 907, 979 |
| TaaI | ACNGT | 2 cut(s) | 857, 1057 |
| TaqI | TCGA | 1 cut(s) | 1284 |
| TauI | GCSGC | 1 cut(s) | 1063 |
| TfiI | GAWTC | 2 cut(s) | 112, 407 |
| Tru1I | TTAA | 6 cut(s) | 168, 714, 819, 882, 1109, 1167 |
| Tru9I | TTAA | 6 cut(s) | 168, 714, 819, 882, 1109, 1167 |
| TscAI | CASTG | 1 cut(s) | 1060 |
| TseFI | GTSAC | 1 cut(s) | 218 |
| TseI | GCWGC | 3 cut(s) | 637, 1013, 1133 |
| Tsp45I | GTSAC | 1 cut(s) | 218 |
| TspGWI | ACGGA | 3 cut(s) | 351, 362, 453 |
| TspRI | CASTG | 1 cut(s) | 1060 |
| Vha464I | CTTAAG | 1 cut(s) | 167 |
| VneI | GTGCAC | 1 cut(s) | 30 |
| VspI | ATTAAT | 1 cut(s) | 882 |
| XapI | RAATTY | 6 cut(s) | 122, 248, 307, 314, 521, 716 |
| XbaI | TCTAGA | 1 cut(s) | 92 |
| XceI | RCATGY | 3 cut(s) | 896, 949, 1085 |
| XspI | CTAG | 2 cut(s) | 93, 287 |
| Zsp2I | ATGCAT | 2 cut(s) | 596, 1083 |