B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 108 |
| AcoI | YGGCCR | 2 cut(s) | 61, 770 |
| AcsI | RAATTY | 3 cut(s) | 461, 557, 997 |
| AcuI | CTGAAG | 2 cut(s) | 932, 962 |
| AfaI | GTAC | 3 cut(s) | 566, 894, 1100 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 135, 252 |
| AjnI | CCWGG | 4 cut(s) | 134, 177, 307, 1004 |
| AluBI | AGCT | 7 cut(s) | 161, 359, 371, 487, 587, 946, 1077 |
| AluI | AGCT | 7 cut(s) | 161, 359, 371, 487, 587, 946, 1077 |
| Alw21I | GWGCWC | 1 cut(s) | 1079 |
| Alw26I | GTCTC | 4 cut(s) | 50, 211, 247, 1052 |
| AoxI | GGCC | 4 cut(s) | 61, 420, 770, 968 |
| ApeKI | GCWGC | 3 cut(s) | 487, 812, 1025 |
| ApoI | RAATTY | 3 cut(s) | 461, 557, 997 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 529 |
| AspLEI | GCGC | 1 cut(s) | 696 |
| AsuHPI | GGTGA | 2 cut(s) | 78, 991 |
| BalI | TGGCCA | 1 cut(s) | 772 |
| BanII | GRGCYC | 1 cut(s) | 1079 |
| BauI | CACGAG | 1 cut(s) | 335 |
| Bbv12I | GWGCWC | 1 cut(s) | 1079 |
| BbvI | GCAGC | 3 cut(s) | 474, 824, 1012 |
| BccI | CCATC | 2 cut(s) | 463, 781 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 101, 135 |
| BciT130I | CCWGG | 4 cut(s) | 136, 179, 309, 1006 |
| BclI | TGATCA | 1 cut(s) | 331 |
| BcoDI | GTCTC | 4 cut(s) | 50, 211, 247, 1052 |
| BfmI | CTRYAG | 2 cut(s) | 354, 729 |
| BglII | AGATCT | 1 cut(s) | 408 |
| BisI | GCNGC | 4 cut(s) | 109, 488, 813, 1026 |
| BlsI | GCNGC | 4 cut(s) | 110, 489, 814, 1027 |
| Bme1390I | CCNGG | 4 cut(s) | 136, 179, 309, 1006 |
| BmrFI | CCNGG | 4 cut(s) | 136, 179, 309, 1006 |
| BmrI | ACTGGG | 1 cut(s) | 232 |
| BmuI | ACTGGG | 1 cut(s) | 232 |
| BpmI | CTGGAG | 1 cut(s) | 291 |
| BsaI | GGTCTC | 1 cut(s) | 50 |
| BsaJI | CCNNGG | 3 cut(s) | 90, 195, 545 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 135, 252 |
| Bse118I | RCCGGY | 2 cut(s) | 59, 895 |
| Bse1I | ACTGG | 1 cut(s) | 227 |
| Bse3DI | GCAATG | 1 cut(s) | 498 |
| BseBI | CCWGG | 4 cut(s) | 136, 179, 309, 1006 |
| BseDI | CCNNGG | 3 cut(s) | 90, 195, 545 |
| BseGI | GGATG | 1 cut(s) | 649 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 135, 252 |
| BseMI | GCAATG | 1 cut(s) | 498 |
| BseMII | CTCAG | 1 cut(s) | 354 |
| BseNI | ACTGG | 1 cut(s) | 227 |
| BseX3I | CGGCCG | 1 cut(s) | 61 |
| BseXI | GCAGC | 3 cut(s) | 474, 824, 1012 |
| BseYI | CCCAGC | 2 cut(s) | 165, 1020 |
| BsgI | GTGCAG | 1 cut(s) | 130 |
| Bsh1285I | CGRYCG | 1 cut(s) | 64 |
| BshFI | GGCC | 4 cut(s) | 63, 422, 772, 970 |
| BsiEI | CGRYCG | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1079 |
| BsiSI | CCGG | 2 cut(s) | 60, 896 |
| BslFI | GGGAC | 2 cut(s) | 635, 812 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 135, 252 |
| BsmAI | GTCTC | 4 cut(s) | 50, 211, 247, 1052 |
| BsmBI | CGTCTC | 1 cut(s) | 1052 |
| BsmFI | GGGAC | 2 cut(s) | 635, 812 |
| BsmI | GAATGC | 1 cut(s) | 377 |
| BsnI | GGCC | 4 cut(s) | 63, 422, 772, 970 |
| Bso31I | GGTCTC | 1 cut(s) | 50 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1079 |
| Bsp143I | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| Bsp19I | CCATGG | 1 cut(s) | 195 |
| BspACI | CCGC | 1 cut(s) | 108 |
| BspANI | GGCC | 4 cut(s) | 63, 422, 772, 970 |
| BspCNI | CTCAG | 1 cut(s) | 355 |
| BspQI | GCTCTTC | 1 cut(s) | 301 |
| BspTNI | GGTCTC | 1 cut(s) | 50 |
| BsrDI | GCAATG | 1 cut(s) | 498 |
| BsrFI | RCCGGY | 2 cut(s) | 59, 895 |
| BsrI | ACTGG | 1 cut(s) | 227 |
| BssAI | RCCGGY | 2 cut(s) | 59, 895 |
| BssECI | CCNNGG | 3 cut(s) | 90, 195, 545 |
| BssMI | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| BssSI | CACGAG | 1 cut(s) | 335 |
| BssT1I | CCWWGG | 3 cut(s) | 90, 195, 545 |
| Bst2BI | CACGAG | 1 cut(s) | 335 |
| Bst2UI | CCWGG | 4 cut(s) | 136, 179, 309, 1006 |
| Bst4CI | ACNGT | 3 cut(s) | 212, 286, 328 |
| Bst6I | CTCTTC | 1 cut(s) | 301 |
| BstC8I | GCNNGC | 4 cut(s) | 61, 163, 492, 496 |
| BstDEI | CTNAG | 2 cut(s) | 363, 847 |
| BstDSI | CCRYGG | 1 cut(s) | 195 |
| BstF5I | GGATG | 1 cut(s) | 649 |
| BstHHI | GCGC | 1 cut(s) | 696 |
| BstKTI | GATC | 6 cut(s) | 68, 144, 334, 411, 965, 1088 |
| BstMAI | GTCTC | 4 cut(s) | 50, 211, 247, 1052 |
| BstMBI | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| BstMCI | CGRYCG | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 300, 500, 1031 |
| BstNI | CCWGG | 4 cut(s) | 136, 179, 309, 1006 |
| BstSCI | CCNGG | 4 cut(s) | 134, 177, 307, 1004 |
| BstSFI | CTRYAG | 2 cut(s) | 354, 729 |
| BstV1I | GCAGC | 3 cut(s) | 474, 824, 1012 |
| BstX2I | RGATCY | 1 cut(s) | 408 |
| BstYI | RGATCY | 1 cut(s) | 408 |
| BstZI | CGGCCG | 1 cut(s) | 61 |
| BsuRI | GGCC | 4 cut(s) | 63, 422, 772, 970 |
| BtgI | CCRYGG | 1 cut(s) | 195 |
| BtgZI | GCGATG | 1 cut(s) | 126 |
| BtsCI | GGATG | 1 cut(s) | 649 |
| BtsI | GCAGTG | 1 cut(s) | 117 |
| BtsIMutI | CAGTG | 2 cut(s) | 117, 220 |
| Cac8I | GCNNGC | 4 cut(s) | 61, 163, 492, 496 |
| CfoI | GCGC | 1 cut(s) | 696 |
| Cfr10I | RCCGGY | 2 cut(s) | 59, 895 |
| CseI | GACGC | 2 cut(s) | 111, 677 |
| Csp6I | GTAC | 3 cut(s) | 565, 893, 1099 |
| CviAII | CATG | 3 cut(s) | 196, 966, 1080 |
| CviQI | GTAC | 3 cut(s) | 565, 893, 1099 |
| DdeI | CTNAG | 2 cut(s) | 363, 847 |
| DpnI | GATC | 6 cut(s) | 67, 143, 333, 410, 964, 1087 |
| DpnII | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| EaeI | YGGCCR | 2 cut(s) | 61, 770 |
| EagI | CGGCCG | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 1 cut(s) | 301 |
| EarI | CTCTTC | 1 cut(s) | 301 |
| Ecl136II | GAGCTC | 1 cut(s) | 1077 |
| EclXI | CGGCCG | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 3 cut(s) | 90, 195, 545 |
| Eco147I | AGGCCT | 1 cut(s) | 422 |
| Eco24I | GRGCYC | 1 cut(s) | 1079 |
| Eco31I | GGTCTC | 1 cut(s) | 50 |
| Eco32I | GATATC | 1 cut(s) | 476 |
| Eco52I | CGGCCG | 1 cut(s) | 61 |
| Eco53kI | GAGCTC | 1 cut(s) | 1077 |
| Eco57I | CTGAAG | 2 cut(s) | 932, 962 |
| EcoICRI | GAGCTC | 1 cut(s) | 1077 |
| EcoRI | GAATTC | 1 cut(s) | 997 |
| EcoRII | CCWGG | 4 cut(s) | 134, 177, 307, 1004 |
| EcoRV | GATATC | 1 cut(s) | 476 |
| EcoT14I | CCWWGG | 3 cut(s) | 90, 195, 545 |
| EcoT38I | GRGCYC | 1 cut(s) | 1079 |
| ErhI | CCWWGG | 3 cut(s) | 90, 195, 545 |
| Esp3I | CGTCTC | 1 cut(s) | 1052 |
| FaeI | CATG | 3 cut(s) | 199, 969, 1083 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 680, 712 |
| FaqI | GGGAC | 2 cut(s) | 635, 812 |
| FatI | CATG | 3 cut(s) | 195, 965, 1079 |
| FbaI | TGATCA | 1 cut(s) | 331 |
| Fnu4HI | GCNGC | 4 cut(s) | 109, 488, 813, 1026 |
| FokI | GGATG | 1 cut(s) | 656 |
| FriOI | GRGCYC | 1 cut(s) | 1079 |
| Fsp4HI | GCNGC | 4 cut(s) | 109, 488, 813, 1026 |
| GlaI | GCGC | 1 cut(s) | 695 |
| GluI | GCNGC | 4 cut(s) | 109, 488, 813, 1026 |
| GsaI | CCCAGC | 2 cut(s) | 169, 1024 |
| GsuI | CTGGAG | 1 cut(s) | 291 |
| HaeIII | GGCC | 4 cut(s) | 63, 422, 772, 970 |
| HapII | CCGG | 2 cut(s) | 60, 896 |
| HgaI | GACGC | 2 cut(s) | 111, 677 |
| HhaI | GCGC | 1 cut(s) | 696 |
| Hin1II | CATG | 3 cut(s) | 199, 969, 1083 |
| Hin6I | GCGC | 1 cut(s) | 694 |
| HinP1I | GCGC | 1 cut(s) | 694 |
| HincII | GTYRAC | 1 cut(s) | 73 |
| HindII | GTYRAC | 1 cut(s) | 73 |
| HindIII | AAGCTT | 2 cut(s) | 159, 944 |
| HinfI | GANTC | 5 cut(s) | 312, 791, 835, 931, 982 |
| HpaII | CCGG | 2 cut(s) | 60, 896 |
| HphI | GGTGA | 2 cut(s) | 78, 991 |
| Hpy166II | GTNNAC | 3 cut(s) | 73, 232, 755 |
| Hpy188I | TCNGA | 4 cut(s) | 247, 364, 460, 687 |
| Hpy188III | TCNNGA | 5 cut(s) | 335, 406, 736, 806, 910 |
| Hpy8I | GTNNAC | 3 cut(s) | 73, 232, 755 |
| HpyAV | CCTTC | 3 cut(s) | 251, 412, 518 |
| HpyCH4III | ACNGT | 3 cut(s) | 212, 286, 328 |
| HpyCH4IV | ACGT | 2 cut(s) | 75, 1061 |
| HpyCH4V | TGCA | 6 cut(s) | 147, 272, 303, 377, 1028, 1067 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 300, 500, 1031 |
| HpyF3I | CTNAG | 2 cut(s) | 363, 847 |
| HpySE526I | ACGT | 2 cut(s) | 75, 1061 |
| Hsp92II | CATG | 3 cut(s) | 199, 969, 1083 |
| HspAI | GCGC | 1 cut(s) | 694 |
| KroI | GCCGGC | 1 cut(s) | 59 |
| KroNI | GCCGGC | 1 cut(s) | 61 |
| Ksp22I | TGATCA | 1 cut(s) | 331 |
| Kzo9I | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| LguI | GCTCTTC | 1 cut(s) | 301 |
| Lsp1109I | GCAGC | 3 cut(s) | 474, 824, 1012 |
| MaeII | ACGT | 2 cut(s) | 75, 1061 |
| MaeIII | GTNAC | 5 cut(s) | 84, 115, 760, 850, 861 |
| MalI | GATC | 6 cut(s) | 67, 143, 333, 410, 964, 1087 |
| MboI | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| MboII | GAAGA | 3 cut(s) | 288, 537, 768 |
| MfeI | CAATTG | 1 cut(s) | 590 |
| MflI | RGATCY | 1 cut(s) | 408 |
| MhlI | GDGCHC | 1 cut(s) | 1079 |
| MlsI | TGGCCA | 1 cut(s) | 772 |
| MluNI | TGGCCA | 1 cut(s) | 772 |
| MmeI | TCCRAC | 1 cut(s) | 268 |
| MnlI | CCTC | 7 cut(s) | 136, 140, 284, 331, 433, 780, 919 |
| Mox20I | TGGCCA | 1 cut(s) | 772 |
| MroNI | GCCGGC | 1 cut(s) | 59 |
| MroXI | GAANNNNTTC | 1 cut(s) | 529 |
| MscI | TGGCCA | 1 cut(s) | 772 |
| MseI | TTAA | 6 cut(s) | 483, 540, 707, 801, 921, 954 |
| Msp20I | TGGCCA | 1 cut(s) | 772 |
| MspI | CCGG | 2 cut(s) | 60, 896 |
| MspR9I | CCNGG | 4 cut(s) | 136, 179, 309, 1006 |
| MunI | CAATTG | 1 cut(s) | 590 |
| Mva1269I | GAATGC | 1 cut(s) | 377 |
| MvaI | CCWGG | 4 cut(s) | 136, 179, 309, 1006 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 300, 500, 1031 |
| NaeI | GCCGGC | 1 cut(s) | 61 |
| NcoI | CCATGG | 1 cut(s) | 195 |
| NdeII | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| NgoMIV | GCCGGC | 1 cut(s) | 59 |
| NlaIII | CATG | 3 cut(s) | 199, 969, 1083 |
| NmuCI | GTSAC | 4 cut(s) | 84, 115, 850, 861 |
| PceI | AGGCCT | 1 cut(s) | 422 |
| PciSI | GCTCTTC | 1 cut(s) | 301 |
| PctI | GAATGC | 1 cut(s) | 377 |
| PdiI | GCCGGC | 1 cut(s) | 61 |
| PdmI | GAANNNNTTC | 1 cut(s) | 529 |
| PfeI | GAWTC | 5 cut(s) | 312, 791, 835, 931, 982 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PkrI | GCNGC | 4 cut(s) | 110, 489, 814, 1027 |
| Psp124BI | GAGCTC | 1 cut(s) | 1079 |
| Psp6I | CCWGG | 4 cut(s) | 134, 177, 307, 1004 |
| PspFI | CCCAGC | 2 cut(s) | 165, 1020 |
| PspGI | CCWGG | 4 cut(s) | 134, 177, 307, 1004 |
| PsuI | RGATCY | 1 cut(s) | 408 |
| RsaI | GTAC | 3 cut(s) | 566, 894, 1100 |
| RsaNI | GTAC | 3 cut(s) | 565, 893, 1099 |
| SacI | GAGCTC | 1 cut(s) | 1079 |
| SapI | GCTCTTC | 1 cut(s) | 301 |
| SaqAI | TTAA | 6 cut(s) | 483, 540, 707, 801, 921, 954 |
| SatI | GCNGC | 4 cut(s) | 109, 488, 813, 1026 |
| Sau3AI | GATC | 6 cut(s) | 65, 141, 331, 408, 962, 1085 |
| ScrFI | CCNGG | 4 cut(s) | 136, 179, 309, 1006 |
| SduI | GDGCHC | 1 cut(s) | 1079 |
| SfcI | CTRYAG | 2 cut(s) | 354, 729 |
| SseBI | AGGCCT | 1 cut(s) | 422 |
| SsiI | CCGC | 1 cut(s) | 108 |
| SstI | GAGCTC | 1 cut(s) | 1079 |
| StuI | AGGCCT | 1 cut(s) | 422 |
| StyD4I | CCNGG | 4 cut(s) | 134, 177, 307, 1004 |
| StyI | CCWWGG | 3 cut(s) | 90, 195, 545 |
| TaaI | ACNGT | 3 cut(s) | 212, 286, 328 |
| TaiI | ACGT | 2 cut(s) | 78, 1064 |
| TaqI | TCGA | 3 cut(s) | 140, 518, 1073 |
| TatI | WGTACW | 1 cut(s) | 1098 |
| TauI | GCSGC | 1 cut(s) | 111 |
| TfiI | GAWTC | 5 cut(s) | 312, 791, 835, 931, 982 |
| Tru1I | TTAA | 6 cut(s) | 483, 540, 707, 801, 921, 954 |
| Tru9I | TTAA | 6 cut(s) | 483, 540, 707, 801, 921, 954 |
| TscAI | CASTG | 2 cut(s) | 124, 227 |
| TseFI | GTSAC | 4 cut(s) | 84, 115, 850, 861 |
| TseI | GCWGC | 3 cut(s) | 487, 812, 1025 |
| Tsp45I | GTSAC | 4 cut(s) | 84, 115, 850, 861 |
| TspDTI | ATGAA | 3 cut(s) | 431, 768, 907 |
| TspRI | CASTG | 2 cut(s) | 124, 227 |
| XapI | RAATTY | 3 cut(s) | 461, 557, 997 |
| XmnI | GAANNNNTTC | 1 cut(s) | 529 |