Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000156

Physical Location & Seq

Genomic Coordinates Reverse (-)

8077957 .. 8079269

Gene Structure 1313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G044500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 537 bp

ATGGAAATAGAACTCAGAAGATCCAAGGATGGTTGGGTTTGGTTTGACAAGGGTTGGCCAGAGTTCTCAAAGTTGTGCTCTCTTGACTATGGAGAGAATGATATGCCAACAAAGAAAGATTTTGGAGGCTCATCTAGCAATCAAATATTCGTTAAACGAACACCTGATGTCCTTGGGAGGACGCATCCATTGACTAAAAGTGAAAAAGCTCTGGCTCTTCAGAGAGCCAATGCTTTCAAATCTGAATATCCTTATTTCTTGGTTGCCATTCCACCGGTTTATATCCACCGTGGTTACCTGCATTTGCCATCCAAGTTTGCAAGGAGACATCTTGTCAAGCAGCCTGCACGTAACATAATCCTTAAGATTTTAGATGGAAGAACTTGGCTTGTCGAATTCAAGTATGAAACTTCAATAGCTCGATTCCAGCGTGGCTGGTTGGCGTTTGCAAGGGACAATAATTTGAAAGTCGGTGATATGTGTGTTTTTGTGTTGATTGACTGCAATGAACGTTTATTTGAAGTTTTTTTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

179

Amino Acids

20.9

Weight (kDa)

9.49

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca	FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica	MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica	Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis	pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis	RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata	RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora	Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa	Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha	Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana	Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	306
AclI	AACGTT	1 cut(s)	511
AclWI	GGATC	1 cut(s)	15
AcoI	YGGCCR	1 cut(s)	56
AcsI	RAATTY	1 cut(s)	395
AcuI	CTGAAG	1 cut(s)	203
AflII	CTTAAG	1 cut(s)	362
AgeI	ACCGGT	1 cut(s)	274
AgsI	TTSAA	5 cut(s)	238, 400, 414, 466, 521
AhdI	GACNNNNNGTC	1 cut(s)	332
AluBI	AGCT	2 cut(s)	209, 419
AluI	AGCT	2 cut(s)	209, 419
Alw21I	GWGCWC	1 cut(s)	80
Alw26I	GTCTC	1 cut(s)	319
AlwI	GGATC	1 cut(s)	15
AoxI	GGCC	1 cut(s)	56
ApeKI	GCWGC	1 cut(s)	340
ApoI	RAATTY	1 cut(s)	395
AsiGI	ACCGGT	1 cut(s)	274
AsuHPI	GGTGA	1 cut(s)	485
BalI	TGGCCA	1 cut(s)	58
Bbv12I	GWGCWC	1 cut(s)	80
BbvI	GCAGC	1 cut(s)	352
BccI	CCATC	3 cut(s)	23, 316, 368
BcoDI	GTCTC	1 cut(s)	319
BfaI	CTAG	1 cut(s)	135
BfrI	CTTAAG	1 cut(s)	362
BfuAI	ACCTGC	1 cut(s)	306
BisI	GCNGC	1 cut(s)	341
BlsI	GCNGC	1 cut(s)	342
BmeRI	GACNNNNNGTC	1 cut(s)	332
BmsI	GCATC	1 cut(s)	193
BsaAI	YACGTR	1 cut(s)	350
BsaJI	CCNNGG	3 cut(s)	24, 172, 289
BsaWI	WCCGGW	1 cut(s)	274
Bse118I	RCCGGY	1 cut(s)	274
Bse3DI	GCAATG	1 cut(s)	511
BseDI	CCNNGG	3 cut(s)	24, 172, 289
BseGI	GGATG	3 cut(s)	34, 184, 308
BseMI	GCAATG	1 cut(s)	511
BseMII	CTCAG	1 cut(s)	28
BseXI	GCAGC	1 cut(s)	352
BsgI	GTGCAG	1 cut(s)	330
BshFI	GGCC	1 cut(s)	58
BshTI	ACCGGT	1 cut(s)	274
BsiHKAI	GWGCWC	1 cut(s)	80
BsiSI	CCGG	1 cut(s)	275
BslFI	GGGAC	1 cut(s)	467
BsmAI	GTCTC	1 cut(s)	319
BsmFI	GGGAC	1 cut(s)	467
BsnI	GGCC	1 cut(s)	58
Bsp1286I	GDGCHC	1 cut(s)	80
Bsp143I	GATC	1 cut(s)	20
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	1 cut(s)	27
BspMI	ACCTGC	1 cut(s)	306
BspPI	GGATC	1 cut(s)	15
BspQI	GCTCTTC	1 cut(s)	222
BspTI	CTTAAG	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	511
BsrFI	RCCGGY	1 cut(s)	274
BssAI	RCCGGY	1 cut(s)	274
BssECI	CCNNGG	3 cut(s)	24, 172, 289
BssMI	GATC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	24, 172
Bst4CI	ACNGT	1 cut(s)	290
Bst6I	CTCTTC	1 cut(s)	222
BstAFI	CTTAAG	1 cut(s)	362
BstBAI	YACGTR	1 cut(s)	350
BstC8I	GCNNGC	1 cut(s)	345
BstDEI	CTNAG	1 cut(s)	14
BstDSI	CCRYGG	1 cut(s)	289
BstEII	GGTNACC	1 cut(s)	293
BstF5I	GGATG	3 cut(s)	34, 184, 308
BstKTI	GATC	1 cut(s)	23
BstMAI	GTCTC	1 cut(s)	319
BstMBI	GATC	1 cut(s)	20
BstMWI	GCNNNNNNNGC	1 cut(s)	135
BstPI	GGTNACC	1 cut(s)	293
BstV1I	GCAGC	1 cut(s)	352
BstX2I	RGATCY	1 cut(s)	20
BstYI	RGATCY	1 cut(s)	20
BsuRI	GGCC	1 cut(s)	58
BtgI	CCRYGG	1 cut(s)	289
BtsCI	GGATG	3 cut(s)	34, 184, 308
BveI	ACCTGC	1 cut(s)	306
Cac8I	GCNNGC	1 cut(s)	345
Cfr10I	RCCGGY	1 cut(s)	274
CseI	GACGC	1 cut(s)	190
CspAI	ACCGGT	1 cut(s)	274
CviJI	RGCY	9 cut(s)	58, 129, 209, 215, 227, 343, 388, 419, 435
CviKI_1	RGCY	9 cut(s)	58, 129, 209, 215, 227, 343, 388, 419, 435
DdeI	CTNAG	1 cut(s)	14
DpnI	GATC	1 cut(s)	22
DpnII	GATC	1 cut(s)	20
DriI	GACNNNNNGTC	1 cut(s)	332
EaeI	YGGCCR	1 cut(s)	56
Eam1104I	CTCTTC	1 cut(s)	222
Eam1105I	GACNNNNNGTC	1 cut(s)	332
EarI	CTCTTC	1 cut(s)	222
Eco130I	CCWWGG	2 cut(s)	24, 172
Eco57I	CTGAAG	1 cut(s)	203
Eco91I	GGTNACC	1 cut(s)	293
EcoO65I	GGTNACC	1 cut(s)	293
EcoRI	GAATTC	1 cut(s)	395
EcoT14I	CCWWGG	2 cut(s)	24, 172
ErhI	CCWWGG	2 cut(s)	24, 172
FaiI	YATR	6 cut(s)	90, 104, 282, 356, 405, 479
FaqI	GGGAC	1 cut(s)	467
Fnu4HI	GCNGC	1 cut(s)	341
FokI	GGATG	3 cut(s)	41, 171, 295
Fsp4HI	GCNGC	1 cut(s)	341
FspBI	CTAG	1 cut(s)	135
GluI	GCNGC	1 cut(s)	341
HaeIII	GGCC	1 cut(s)	58
HapII	CCGG	1 cut(s)	275
HgaI	GACGC	1 cut(s)	190
HinfI	GANTC	1 cut(s)	423
HpaII	CCGG	1 cut(s)	275
HphI	GGTGA	1 cut(s)	485
Hpy188I	TCNGA	3 cut(s)	17, 222, 244
Hpy188III	TCNNGA	1 cut(s)	83
HpyCH4III	ACNGT	1 cut(s)	290
HpyCH4IV	ACGT	2 cut(s)	349, 511
HpyCH4V	TGCA	5 cut(s)	301, 320, 347, 449, 504
HpyF10VI	GCNNNNNNNGC	1 cut(s)	135
HpyF3I	CTNAG	1 cut(s)	14
HpySE526I	ACGT	2 cut(s)	349, 511
Kzo9I	GATC	1 cut(s)	20
LguI	GCTCTTC	1 cut(s)	222
LpnPI	CCDG	8 cut(s)	72, 177, 197, 288, 311, 357, 421, 440
Lsp1109I	GCAGC	1 cut(s)	352
LweI	GCATC	1 cut(s)	193
MaeI	CTAG	1 cut(s)	135
MaeII	ACGT	2 cut(s)	349, 511
MaeIII	GTNAC	2 cut(s)	293, 350
MalI	GATC	1 cut(s)	22
MboI	GATC	1 cut(s)	20
MboII	GAAGA	3 cut(s)	30, 209, 390
MflI	RGATCY	1 cut(s)	20
MhlI	GDGCHC	1 cut(s)	80
MlsI	TGGCCA	1 cut(s)	58
MluCI	AATT	2 cut(s)	395, 460
MluNI	TGGCCA	1 cut(s)	58
MnlI	CCTC	2 cut(s)	119, 171
Mox20I	TGGCCA	1 cut(s)	58
MscI	TGGCCA	1 cut(s)	58
MseI	TTAA	3 cut(s)	153, 363, 535
Msp20I	TGGCCA	1 cut(s)	58
MspCI	CTTAAG	1 cut(s)	362
MspI	CCGG	1 cut(s)	275
MwoI	GCNNNNNNNGC	1 cut(s)	135
NdeII	GATC	1 cut(s)	20
PciSI	GCTCTTC	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	1 cut(s)	427
PfeI	GAWTC	1 cut(s)	423
PinAI	ACCGGT	1 cut(s)	274
PkrI	GCNGC	1 cut(s)	342
Ppu21I	YACGTR	1 cut(s)	350
Psp1406I	AACGTT	1 cut(s)	511
PspEI	GGTNACC	1 cut(s)	293
PsuI	RGATCY	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	222
SaqAI	TTAA	3 cut(s)	153, 363, 535
SatI	GCNGC	1 cut(s)	341
Sau3AI	GATC	1 cut(s)	20
SduI	GDGCHC	1 cut(s)	80
SetI	ASST	6 cut(s)	166, 211, 300, 352, 421, 514
SfaNI	GCATC	1 cut(s)	193
SmlI	CTYRAG	1 cut(s)	362
SmoI	CTYRAG	1 cut(s)	362
Sse9I	AATT	2 cut(s)	395, 460
SspI	AATATT	1 cut(s)	147
SspMI	CTAG	1 cut(s)	135
StyI	CCWWGG	2 cut(s)	24, 172
TaaI	ACNGT	1 cut(s)	290
TaiI	ACGT	2 cut(s)	352, 514
TaqI	TCGA	2 cut(s)	393, 421
TasI	AATT	2 cut(s)	395, 460
TfiI	GAWTC	1 cut(s)	423
Tru1I	TTAA	3 cut(s)	153, 363, 535
Tru9I	TTAA	3 cut(s)	153, 363, 535
TseI	GCWGC	1 cut(s)	340
TspDTI	ATGAA	2 cut(s)	420, 522
Vha464I	CTTAAG	1 cut(s)	362
XapI	RAATTY	1 cut(s)	395
XspI	CTAG	1 cut(s)	135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.