B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 79 - 387 | 7.1e-29 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 429 |
| AatII | GACGTC | 1 cut(s) | 72 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 344 |
| AccI | GTMKAC | 1 cut(s) | 436 |
| AciI | CCGC | 3 cut(s) | 5, 118, 1084 |
| AclI | AACGTT | 1 cut(s) | 963 |
| AclWI | GGATC | 1 cut(s) | 390 |
| AcsI | RAATTY | 1 cut(s) | 1189 |
| AcuI | CTGAAG | 1 cut(s) | 969 |
| AcyI | GRCGYC | 1 cut(s) | 69 |
| AfaI | GTAC | 2 cut(s) | 247, 903 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 344, 379, 662 |
| AgsI | TTSAA | 5 cut(s) | 598, 856, 956, 961, 1051 |
| AhlI | ACTAGT | 1 cut(s) | 28 |
| AjnI | CCWGG | 2 cut(s) | 1111, 1263 |
| AleI | CACNNNNGTG | 1 cut(s) | 695 |
| AluBI | AGCT | 7 cut(s) | 255, 425, 584, 641, 892, 1040, 1277 |
| AluI | AGCT | 7 cut(s) | 255, 425, 584, 641, 892, 1040, 1277 |
| Alw21I | GWGCWC | 2 cut(s) | 510, 671 |
| Alw26I | GTCTC | 4 cut(s) | 4, 76, 816, 1121 |
| AlwI | GGATC | 1 cut(s) | 390 |
| Ama87I | CYCGRG | 1 cut(s) | 1101 |
| ApeKI | GCWGC | 2 cut(s) | 892, 1216 |
| ApoI | RAATTY | 1 cut(s) | 1189 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 187 |
| AspA2I | CCTAGG | 1 cut(s) | 656 |
| AspLEI | GCGC | 2 cut(s) | 51, 105 |
| AspS9I | GGNCC | 2 cut(s) | 334, 347 |
| AsuC2I | CCSGG | 2 cut(s) | 380, 886 |
| AsuHPI | GGTGA | 6 cut(s) | 150, 224, 229, 286, 841, 1252 |
| AsuII | TTCGAA | 1 cut(s) | 651 |
| AvaI | CYCGRG | 1 cut(s) | 1101 |
| AvaII | GGWCC | 2 cut(s) | 334, 347 |
| AvrII | CCTAGG | 1 cut(s) | 656 |
| BauI | CACGAG | 1 cut(s) | 509 |
| Bbv12I | GWGCWC | 2 cut(s) | 510, 671 |
| BbvI | GCAGC | 2 cut(s) | 879, 1203 |
| BccI | CCATC | 5 cut(s) | 139, 518, 1027, 1193, 1265 |
| BceAI | ACGGC | 1 cut(s) | 831 |
| BciT130I | CCWGG | 2 cut(s) | 1113, 1265 |
| BclI | TGATCA | 3 cut(s) | 301, 513, 607 |
| BcnI | CCSGG | 2 cut(s) | 380, 886 |
| BcoDI | GTCTC | 4 cut(s) | 4, 76, 816, 1121 |
| BcuI | ACTAGT | 1 cut(s) | 28 |
| BfaI | CTAG | 5 cut(s) | 29, 657, 695, 918, 1227 |
| BfoI | RGCGCY | 2 cut(s) | 52, 106 |
| BisI | GCNGC | 3 cut(s) | 893, 1084, 1217 |
| BlnI | CCTAGG | 1 cut(s) | 656 |
| BlsI | GCNGC | 3 cut(s) | 894, 1085, 1218 |
| Bme1390I | CCNGG | 4 cut(s) | 380, 886, 1113, 1265 |
| Bme18I | GGWCC | 2 cut(s) | 334, 347 |
| BmeT110I | CYCGRG | 1 cut(s) | 1101 |
| BmgT120I | GGNCC | 2 cut(s) | 334, 347 |
| BmiI | GGNNCC | 1 cut(s) | 336 |
| BmrFI | CCNGG | 4 cut(s) | 380, 886, 1113, 1265 |
| BmrI | ACTGGG | 3 cut(s) | 218, 237, 688 |
| BmsI | GCATC | 1 cut(s) | 159 |
| BmuI | ACTGGG | 3 cut(s) | 218, 237, 688 |
| Bpu14I | TTCGAA | 1 cut(s) | 651 |
| BpuEI | CTTGAG | 2 cut(s) | 926, 1034 |
| BpuMI | CCSGG | 2 cut(s) | 380, 886 |
| BsaAI | YACGTR | 1 cut(s) | 905 |
| BsaBI | GATNNNNATC | 1 cut(s) | 300 |
| BsaHI | GRCGYC | 1 cut(s) | 69 |
| BsaI | GGTCTC | 1 cut(s) | 1121 |
| BsaJI | CCNNGG | 4 cut(s) | 656, 847, 885, 1263 |
| BsaWI | WCCGGW | 1 cut(s) | 826 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 444, 474 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 344, 379, 662 |
| Bse118I | RCCGGY | 1 cut(s) | 364 |
| Bse1I | ACTGG | 3 cut(s) | 224, 243, 683 |
| Bse3DI | GCAATG | 1 cut(s) | 577 |
| Bse8I | GATNNNNATC | 1 cut(s) | 300 |
| BseBI | CCWGG | 2 cut(s) | 1113, 1265 |
| BseDI | CCNNGG | 4 cut(s) | 656, 847, 885, 1263 |
| BseGI | GGATG | 2 cut(s) | 131, 881 |
| BseJI | GATNNNNATC | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 344, 379, 662 |
| BseMI | GCAATG | 1 cut(s) | 577 |
| BseNI | ACTGG | 3 cut(s) | 224, 243, 683 |
| BseRI | GAGGAG | 1 cut(s) | 97 |
| BseXI | GCAGC | 2 cut(s) | 879, 1203 |
| BseYI | CCCAGC | 1 cut(s) | 1121 |
| BsiHKAI | GWGCWC | 2 cut(s) | 510, 671 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1101 |
| BsiSI | CCGG | 4 cut(s) | 365, 380, 827, 885 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 344, 379, 662 |
| BsmAI | GTCTC | 4 cut(s) | 4, 76, 816, 1121 |
| BsmBI | CGTCTC | 1 cut(s) | 76 |
| Bso31I | GGTCTC | 1 cut(s) | 1121 |
| BsoBI | CYCGRG | 1 cut(s) | 1101 |
| Bsp119I | TTCGAA | 1 cut(s) | 651 |
| Bsp1286I | GDGCHC | 2 cut(s) | 510, 671 |
| Bsp143I | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| BspACI | CCGC | 3 cut(s) | 5, 118, 1084 |
| BspHI | TCATGA | 2 cut(s) | 204, 601 |
| BspLI | GGNNCC | 1 cut(s) | 336 |
| BspPI | GGATC | 1 cut(s) | 390 |
| BspT104I | TTCGAA | 1 cut(s) | 651 |
| BspTNI | GGTCTC | 1 cut(s) | 1121 |
| BsrDI | GCAATG | 1 cut(s) | 577 |
| BsrFI | RCCGGY | 1 cut(s) | 364 |
| BsrI | ACTGG | 3 cut(s) | 224, 243, 683 |
| BssAI | RCCGGY | 1 cut(s) | 364 |
| BssECI | CCNNGG | 4 cut(s) | 656, 847, 885, 1263 |
| BssMI | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| BssNI | GRCGYC | 1 cut(s) | 69 |
| BssSI | CACGAG | 1 cut(s) | 509 |
| BssT1I | CCWWGG | 1 cut(s) | 656 |
| Bst2BI | CACGAG | 1 cut(s) | 509 |
| Bst2UI | CCWGG | 2 cut(s) | 1113, 1265 |
| Bst4CI | ACNGT | 3 cut(s) | 188, 621, 766 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 1013 |
| BstACI | GRCGYC | 1 cut(s) | 69 |
| BstBAI | YACGTR | 1 cut(s) | 905 |
| BstBI | TTCGAA | 1 cut(s) | 651 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstDSI | CCRYGG | 1 cut(s) | 847 |
| BstF5I | GGATG | 2 cut(s) | 131, 881 |
| BstH2I | RGCGCY | 2 cut(s) | 52, 106 |
| BstHHI | GCGC | 2 cut(s) | 51, 105 |
| BstKTI | GATC | 6 cut(s) | 66, 304, 385, 516, 610, 1057 |
| BstMAI | GTCTC | 4 cut(s) | 4, 76, 816, 1121 |
| BstMBI | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 581, 1080, 1274 |
| BstNI | CCWGG | 2 cut(s) | 1113, 1265 |
| BstSCI | CCNGG | 4 cut(s) | 378, 884, 1111, 1263 |
| BstV1I | GCAGC | 2 cut(s) | 879, 1203 |
| BstX2I | RGATCY | 1 cut(s) | 382 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 697 |
| BstYI | RGATCY | 1 cut(s) | 382 |
| BtgI | CCRYGG | 1 cut(s) | 847 |
| BtsCI | GGATG | 2 cut(s) | 131, 881 |
| BtsIMutI | CAGTG | 1 cut(s) | 626 |
| CciI | TCATGA | 2 cut(s) | 204, 601 |
| CfoI | GCGC | 2 cut(s) | 51, 105 |
| Cfr10I | RCCGGY | 1 cut(s) | 364 |
| Cfr13I | GGNCC | 2 cut(s) | 334, 347 |
| Csp6I | GTAC | 2 cut(s) | 246, 902 |
| CviAII | CATG | 3 cut(s) | 99, 205, 602 |
| CviQI | GTAC | 2 cut(s) | 246, 902 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 6 cut(s) | 65, 303, 384, 515, 609, 1056 |
| DpnII | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| DraI | TTTAAA | 1 cut(s) | 1194 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 1013 |
| EarI | CTCTTC | 2 cut(s) | 218, 1013 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 656 |
| Eco31I | GGTCTC | 1 cut(s) | 1121 |
| Eco47I | GGWCC | 2 cut(s) | 334, 347 |
| Eco57I | CTGAAG | 1 cut(s) | 969 |
| Eco88I | CYCGRG | 1 cut(s) | 1101 |
| EcoRII | CCWGG | 2 cut(s) | 1111, 1263 |
| EcoT14I | CCWWGG | 1 cut(s) | 656 |
| EcoT22I | ATGCAT | 1 cut(s) | 577 |
| ErhI | CCWWGG | 1 cut(s) | 656 |
| Esp3I | CGTCTC | 1 cut(s) | 76 |
| FaeI | CATG | 3 cut(s) | 102, 208, 605 |
| FatI | CATG | 3 cut(s) | 98, 204, 601 |
| FauI | CCCGC | 1 cut(s) | 125 |
| FbaI | TGATCA | 3 cut(s) | 301, 513, 607 |
| FblI | GTMKAC | 1 cut(s) | 436 |
| Fnu4HI | GCNGC | 3 cut(s) | 893, 1084, 1217 |
| FokI | GGATG | 2 cut(s) | 118, 868 |
| Fsp4HI | GCNGC | 3 cut(s) | 893, 1084, 1217 |
| FspBI | CTAG | 5 cut(s) | 29, 657, 695, 918, 1227 |
| GlaI | GCGC | 2 cut(s) | 50, 104 |
| GluI | GCNGC | 3 cut(s) | 893, 1084, 1217 |
| GsaI | CCCAGC | 1 cut(s) | 1125 |
| HaeII | RGCGCY | 2 cut(s) | 52, 106 |
| HapII | CCGG | 4 cut(s) | 365, 380, 827, 885 |
| HhaI | GCGC | 2 cut(s) | 51, 105 |
| Hin1I | GRCGYC | 1 cut(s) | 69 |
| Hin1II | CATG | 3 cut(s) | 102, 208, 605 |
| Hin6I | GCGC | 2 cut(s) | 49, 103 |
| HinP1I | GCGC | 2 cut(s) | 49, 103 |
| HindIII | AAGCTT | 2 cut(s) | 423, 1038 |
| HinfI | GANTC | 4 cut(s) | 78, 878, 921, 1223 |
| HpaII | CCGG | 4 cut(s) | 365, 380, 827, 885 |
| HphI | GGTGA | 6 cut(s) | 150, 224, 229, 286, 841, 1252 |
| Hpy166II | GTNNAC | 5 cut(s) | 196, 437, 908, 931, 967 |
| Hpy188I | TCNGA | 4 cut(s) | 412, 564, 1045, 1292 |
| Hpy8I | GTNNAC | 5 cut(s) | 196, 437, 908, 931, 967 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 1 cut(s) | 284 |
| HpyCH4III | ACNGT | 3 cut(s) | 188, 621, 766 |
| HpyCH4IV | ACGT | 3 cut(s) | 69, 904, 963 |
| HpyCH4V | TGCA | 2 cut(s) | 570, 575 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 581, 1080, 1274 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| HpySE526I | ACGT | 3 cut(s) | 69, 904, 963 |
| Hsp92I | GRCGYC | 1 cut(s) | 69 |
| Hsp92II | CATG | 3 cut(s) | 102, 208, 605 |
| HspAI | GCGC | 2 cut(s) | 49, 103 |
| Ksp22I | TGATCA | 3 cut(s) | 301, 513, 607 |
| Kzo9I | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| LmnI | GCTCC | 3 cut(s) | 110, 666, 889 |
| Lsp1109I | GCAGC | 2 cut(s) | 879, 1203 |
| LweI | GCATC | 1 cut(s) | 159 |
| MaeI | CTAG | 5 cut(s) | 29, 657, 695, 918, 1227 |
| MaeII | ACGT | 3 cut(s) | 69, 904, 963 |
| MaeIII | GTNAC | 1 cut(s) | 554 |
| MalI | GATC | 6 cut(s) | 65, 303, 384, 515, 609, 1056 |
| MboI | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| MboII | GAAGA | 3 cut(s) | 205, 1015, 1030 |
| MfeI | CAATTG | 2 cut(s) | 305, 934 |
| MflI | RGATCY | 1 cut(s) | 382 |
| MhlI | GDGCHC | 2 cut(s) | 510, 671 |
| MmeI | TCCRAC | 3 cut(s) | 312, 375, 1004 |
| Mph1103I | ATGCAT | 1 cut(s) | 577 |
| MroXI | GAANNNNTTC | 1 cut(s) | 187 |
| MseI | TTAA | 9 cut(s) | 123, 279, 447, 488, 795, 807, 974, 1193, 1251 |
| MslI | CAYNNNNRTG | 1 cut(s) | 695 |
| MspI | CCGG | 4 cut(s) | 365, 380, 827, 885 |
| MspR9I | CCNGG | 4 cut(s) | 380, 886, 1113, 1265 |
| MunI | CAATTG | 2 cut(s) | 305, 934 |
| MvaI | CCWGG | 2 cut(s) | 1113, 1265 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 581, 1080, 1274 |
| NciI | CCSGG | 2 cut(s) | 380, 886 |
| NdeII | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| NlaIII | CATG | 3 cut(s) | 102, 208, 605 |
| NlaIV | GGNNCC | 1 cut(s) | 336 |
| NmuCI | GTSAC | 1 cut(s) | 554 |
| NsiI | ATGCAT | 1 cut(s) | 577 |
| NspV | TTCGAA | 1 cut(s) | 651 |
| OliI | CACNNNNGTG | 1 cut(s) | 695 |
| PaeR7I | CTCGAG | 1 cut(s) | 1101 |
| PagI | TCATGA | 2 cut(s) | 204, 601 |
| PdmI | GAANNNNTTC | 1 cut(s) | 187 |
| PfeI | GAWTC | 4 cut(s) | 78, 878, 921, 1223 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 344 |
| PkrI | GCNGC | 3 cut(s) | 894, 1085, 1218 |
| Ppu21I | YACGTR | 1 cut(s) | 905 |
| PsiI | TTATAA | 1 cut(s) | 429 |
| Psp1406I | AACGTT | 1 cut(s) | 963 |
| Psp6I | CCWGG | 2 cut(s) | 1111, 1263 |
| PspFI | CCCAGC | 1 cut(s) | 1121 |
| PspGI | CCWGG | 2 cut(s) | 1111, 1263 |
| PspN4I | GGNNCC | 1 cut(s) | 336 |
| PspPI | GGNCC | 2 cut(s) | 334, 347 |
| PsuI | RGATCY | 1 cut(s) | 382 |
| RsaI | GTAC | 2 cut(s) | 247, 903 |
| RsaNI | GTAC | 2 cut(s) | 246, 902 |
| RseI | CAYNNNNRTG | 1 cut(s) | 695 |
| SaqAI | TTAA | 9 cut(s) | 123, 279, 447, 488, 795, 807, 974, 1193, 1251 |
| SatI | GCNGC | 3 cut(s) | 893, 1084, 1217 |
| Sau3AI | GATC | 6 cut(s) | 63, 301, 382, 513, 607, 1054 |
| Sau96I | GGNCC | 2 cut(s) | 334, 347 |
| ScrFI | CCNGG | 4 cut(s) | 380, 886, 1113, 1265 |
| SduI | GDGCHC | 2 cut(s) | 510, 671 |
| SfaNI | GCATC | 1 cut(s) | 159 |
| Sfr274I | CTCGAG | 1 cut(s) | 1101 |
| SfuI | TTCGAA | 1 cut(s) | 651 |
| SinI | GGWCC | 2 cut(s) | 334, 347 |
| SlaI | CTCGAG | 1 cut(s) | 1101 |
| SmiI | ATTTAAAT | 1 cut(s) | 1194 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 695 |
| SmlI | CTYRAG | 3 cut(s) | 941, 1013, 1101 |
| SmoI | CTYRAG | 3 cut(s) | 941, 1013, 1101 |
| SpeI | ACTAGT | 1 cut(s) | 28 |
| SsiI | CCGC | 3 cut(s) | 5, 118, 1084 |
| SspMI | CTAG | 5 cut(s) | 29, 657, 695, 918, 1227 |
| StyD4I | CCNGG | 4 cut(s) | 378, 884, 1111, 1263 |
| StyI | CCWWGG | 1 cut(s) | 656 |
| SwaI | ATTTAAAT | 1 cut(s) | 1194 |
| TaaI | ACNGT | 3 cut(s) | 188, 621, 766 |
| TaiI | ACGT | 3 cut(s) | 72, 907, 966 |
| TauI | GCSGC | 1 cut(s) | 1086 |
| TfiI | GAWTC | 4 cut(s) | 78, 878, 921, 1223 |
| Tru1I | TTAA | 9 cut(s) | 123, 279, 447, 488, 795, 807, 974, 1193, 1251 |
| Tru9I | TTAA | 9 cut(s) | 123, 279, 447, 488, 795, 807, 974, 1193, 1251 |
| TscAI | CASTG | 1 cut(s) | 626 |
| TseFI | GTSAC | 1 cut(s) | 554 |
| TseI | GCWGC | 2 cut(s) | 892, 1216 |
| Tsp45I | GTSAC | 1 cut(s) | 554 |
| TspDTI | ATGAA | 1 cut(s) | 1170 |
| TspGWI | ACGGA | 1 cut(s) | 71 |
| TspRI | CASTG | 1 cut(s) | 626 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 344 |
| VpaK11BI | GGWCC | 2 cut(s) | 334, 347 |
| XapI | RAATTY | 1 cut(s) | 1189 |
| XhoI | CTCGAG | 1 cut(s) | 1101 |
| XmaJI | CCTAGG | 1 cut(s) | 656 |
| XmiI | GTMKAC | 1 cut(s) | 436 |
| XmnI | GAANNNNTTC | 1 cut(s) | 187 |
| XspI | CTAG | 5 cut(s) | 29, 657, 695, 918, 1227 |
| ZraI | GACGTC | 1 cut(s) | 70 |
| Zsp2I | ATGCAT | 1 cut(s) | 577 |