B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1919 |
| Acc36I | ACCTGC | 1 cut(s) | 1642 |
| AccII | CGCG | 1 cut(s) | 1884 |
| AciI | CCGC | 1 cut(s) | 814 |
| AclWI | GGATC | 3 cut(s) | 132, 1819, 1832 |
| AcoI | YGGCCR | 1 cut(s) | 221 |
| AcuI | CTGAAG | 3 cut(s) | 390, 999, 1814 |
| AcvI | CACGTG | 1 cut(s) | 1855 |
| AfaI | GTAC | 3 cut(s) | 438, 1776, 1986 |
| AflII | CTTAAG | 1 cut(s) | 146 |
| AflIII | ACRYGT | 3 cut(s) | 528, 1632, 1807 |
| AjnI | CCWGG | 4 cut(s) | 264, 900, 1443, 1749 |
| Alw21I | GWGCWC | 1 cut(s) | 1965 |
| AlwI | GGATC | 3 cut(s) | 132, 1819, 1832 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1499 |
| Ama87I | CYCGRG | 1 cut(s) | 1363 |
| AoxI | GGCC | 5 cut(s) | 221, 815, 1369, 1522, 1759 |
| ApeKI | GCWGC | 4 cut(s) | 1216, 1593, 1706, 1910 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1084, 1733 |
| AspLEI | GCGC | 1 cut(s) | 1886 |
| AsuHPI | GGTGA | 5 cut(s) | 823, 959, 1436, 1713, 1738 |
| AsuII | TTCGAA | 1 cut(s) | 981 |
| AsuNHI | GCTAGC | 2 cut(s) | 821, 1709 |
| AvaI | CYCGRG | 1 cut(s) | 1363 |
| BalI | TGGCCA | 1 cut(s) | 223 |
| BamHI | GGATCC | 1 cut(s) | 1824 |
| BanII | GRGCYC | 1 cut(s) | 1965 |
| BauI | CACGAG | 1 cut(s) | 452 |
| BbrPI | CACGTG | 1 cut(s) | 1855 |
| Bbv12I | GWGCWC | 1 cut(s) | 1965 |
| BbvI | GCAGC | 4 cut(s) | 1228, 1605, 1693, 1897 |
| BccI | CCATC | 5 cut(s) | 213, 602, 1067, 1310, 1313 |
| BceAI | ACGGC | 1 cut(s) | 766 |
| BciT130I | CCWGG | 4 cut(s) | 266, 902, 1445, 1751 |
| BciVI | GTATCC | 1 cut(s) | 751 |
| BclI | TGATCA | 1 cut(s) | 1351 |
| BfaI | CTAG | 6 cut(s) | 248, 621, 822, 1622, 1710, 1791 |
| BfmI | CTRYAG | 2 cut(s) | 1518, 1569 |
| BfrI | CTTAAG | 1 cut(s) | 146 |
| BfuAI | ACCTGC | 1 cut(s) | 1642 |
| BfuI | GTATCC | 1 cut(s) | 751 |
| BisI | GCNGC | 5 cut(s) | 815, 1217, 1594, 1707, 1911 |
| BlsI | GCNGC | 5 cut(s) | 816, 1218, 1595, 1708, 1912 |
| Bme1390I | CCNGG | 4 cut(s) | 266, 902, 1445, 1751 |
| BmeT110I | CYCGRG | 1 cut(s) | 1363 |
| BmiI | GGNNCC | 2 cut(s) | 1131, 1826 |
| BmrFI | CCNGG | 4 cut(s) | 266, 902, 1445, 1751 |
| BmrI | ACTGGG | 1 cut(s) | 1128 |
| BmsI | GCATC | 3 cut(s) | 179, 480, 1162 |
| BmtI | GCTAGC | 2 cut(s) | 825, 1713 |
| BmuI | ACTGGG | 1 cut(s) | 1128 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1359, 1391 |
| BpmI | CTGGAG | 1 cut(s) | 417 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1598 |
| Bpu14I | TTCGAA | 1 cut(s) | 981 |
| BpuEI | CTTGAG | 1 cut(s) | 650 |
| BsaAI | YACGTR | 1 cut(s) | 1855 |
| BsaJI | CCNNGG | 5 cut(s) | 327, 1443, 1525, 1749, 1750 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1039, 1069 |
| Bse1I | ACTGG | 2 cut(s) | 434, 1134 |
| Bse3DI | GCAATG | 2 cut(s) | 688, 1296 |
| BseBI | CCWGG | 4 cut(s) | 266, 902, 1445, 1751 |
| BseDI | CCNNGG | 5 cut(s) | 327, 1443, 1525, 1749, 1750 |
| BseGI | GGATG | 5 cut(s) | 224, 1078, 1146, 1302, 1324 |
| BseMI | GCAATG | 2 cut(s) | 688, 1296 |
| BseMII | CTCAG | 3 cut(s) | 11, 1152, 1589 |
| BseNI | ACTGG | 2 cut(s) | 434, 1134 |
| BseRI | GAGGAG | 1 cut(s) | 438 |
| BseXI | GCAGC | 4 cut(s) | 1228, 1605, 1693, 1897 |
| Bsh1236I | CGCG | 1 cut(s) | 1884 |
| BshFI | GGCC | 5 cut(s) | 223, 817, 1371, 1524, 1761 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1965 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1363 |
| BsmI | GAATGC | 1 cut(s) | 1595 |
| BsnI | GGCC | 5 cut(s) | 223, 817, 1371, 1524, 1761 |
| BsoBI | CYCGRG | 1 cut(s) | 1363 |
| Bsp119I | TTCGAA | 1 cut(s) | 981 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1965 |
| Bsp143I | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| Bsp19I | CCATGG | 1 cut(s) | 1525 |
| BspACI | CCGC | 1 cut(s) | 814 |
| BspANI | GGCC | 5 cut(s) | 223, 817, 1371, 1524, 1761 |
| BspCNI | CTCAG | 3 cut(s) | 12, 1153, 1590 |
| BspFNI | CGCG | 1 cut(s) | 1884 |
| BspHI | TCATGA | 2 cut(s) | 1123, 1377 |
| BspLI | GGNNCC | 2 cut(s) | 1131, 1826 |
| BspMI | ACCTGC | 1 cut(s) | 1642 |
| BspOI | GCTAGC | 2 cut(s) | 825, 1713 |
| BspPI | GGATC | 3 cut(s) | 132, 1819, 1832 |
| BspT104I | TTCGAA | 1 cut(s) | 981 |
| BspTI | CTTAAG | 1 cut(s) | 146 |
| BsrDI | GCAATG | 2 cut(s) | 688, 1296 |
| BsrI | ACTGG | 2 cut(s) | 434, 1134 |
| BssECI | CCNNGG | 5 cut(s) | 327, 1443, 1525, 1749, 1750 |
| BssMI | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| BssSI | CACGAG | 1 cut(s) | 452 |
| BssT1I | CCWWGG | 1 cut(s) | 1525 |
| Bst2BI | CACGAG | 1 cut(s) | 452 |
| Bst2UI | CCWGG | 4 cut(s) | 266, 902, 1445, 1751 |
| Bst4CI | ACNGT | 2 cut(s) | 881, 1156 |
| Bst6I | CTCTTC | 2 cut(s) | 699, 1090 |
| BstAFI | CTTAAG | 1 cut(s) | 146 |
| BstBAI | YACGTR | 1 cut(s) | 1855 |
| BstBI | TTCGAA | 1 cut(s) | 981 |
| BstC8I | GCNNGC | 3 cut(s) | 819, 823, 1711 |
| BstDEI | CTNAG | 5 cut(s) | 20, 1161, 1598, 1644, 2014 |
| BstDSI | CCRYGG | 1 cut(s) | 1525 |
| BstEII | GGTNACC | 1 cut(s) | 1389 |
| BstF5I | GGATG | 5 cut(s) | 224, 1078, 1146, 1302, 1324 |
| BstFNI | CGCG | 1 cut(s) | 1884 |
| BstHHI | GCGC | 1 cut(s) | 1886 |
| BstKTI | GATC | 5 cut(s) | 57, 127, 1354, 1827, 1847 |
| BstMBI | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 633, 1298, 1599 |
| BstNI | CCWGG | 4 cut(s) | 266, 902, 1445, 1751 |
| BstNSI | RCATGY | 5 cut(s) | 532, 1337, 1636, 1775, 1811 |
| BstPI | GGTNACC | 1 cut(s) | 1389 |
| BstSCI | CCNGG | 4 cut(s) | 264, 900, 1443, 1749 |
| BstSFI | CTRYAG | 2 cut(s) | 1518, 1569 |
| BstUI | CGCG | 1 cut(s) | 1884 |
| BstV1I | GCAGC | 4 cut(s) | 1228, 1605, 1693, 1897 |
| BstX2I | RGATCY | 2 cut(s) | 124, 1824 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1073 |
| BstYI | RGATCY | 2 cut(s) | 124, 1824 |
| BsuI | GTATCC | 1 cut(s) | 751 |
| BsuRI | GGCC | 5 cut(s) | 223, 817, 1371, 1524, 1761 |
| BtgI | CCRYGG | 1 cut(s) | 1525 |
| BtgZI | GCGATG | 1 cut(s) | 1497 |
| BtsCI | GGATG | 5 cut(s) | 224, 1078, 1146, 1302, 1324 |
| BtsI | GCAGTG | 1 cut(s) | 619 |
| BtsIMutI | CAGTG | 3 cut(s) | 481, 619, 886 |
| BveI | ACCTGC | 1 cut(s) | 1642 |
| Cac8I | GCNNGC | 3 cut(s) | 819, 823, 1711 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1499 |
| CciI | TCATGA | 2 cut(s) | 1123, 1377 |
| CfoI | GCGC | 1 cut(s) | 1886 |
| Csp6I | GTAC | 3 cut(s) | 437, 1775, 1985 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 313, 348 |
| CviQI | GTAC | 3 cut(s) | 437, 1775, 1985 |
| DdeI | CTNAG | 5 cut(s) | 20, 1161, 1598, 1644, 2014 |
| DpnI | GATC | 5 cut(s) | 56, 126, 1353, 1826, 1846 |
| DpnII | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| EaeI | YGGCCR | 1 cut(s) | 221 |
| Eam1104I | CTCTTC | 2 cut(s) | 699, 1090 |
| EarI | CTCTTC | 2 cut(s) | 699, 1090 |
| Ecl136II | GAGCTC | 1 cut(s) | 1963 |
| Eco130I | CCWWGG | 1 cut(s) | 1525 |
| Eco24I | GRGCYC | 1 cut(s) | 1965 |
| Eco32I | GATATC | 1 cut(s) | 1274 |
| Eco53kI | GAGCTC | 1 cut(s) | 1963 |
| Eco57I | CTGAAG | 3 cut(s) | 390, 999, 1814 |
| Eco72I | CACGTG | 1 cut(s) | 1855 |
| Eco88I | CYCGRG | 1 cut(s) | 1363 |
| Eco91I | GGTNACC | 1 cut(s) | 1389 |
| EcoICRI | GAGCTC | 1 cut(s) | 1963 |
| EcoO65I | GGTNACC | 1 cut(s) | 1389 |
| EcoRII | CCWGG | 4 cut(s) | 264, 900, 1443, 1749 |
| EcoRV | GATATC | 1 cut(s) | 1274 |
| EcoT14I | CCWWGG | 1 cut(s) | 1525 |
| EcoT38I | GRGCYC | 1 cut(s) | 1965 |
| ErhI | CCWWGG | 1 cut(s) | 1525 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1718, 1750 |
| FbaI | TGATCA | 1 cut(s) | 1351 |
| Fnu4HI | GCNGC | 5 cut(s) | 815, 1217, 1594, 1707, 1911 |
| FokI | GGATG | 5 cut(s) | 231, 1085, 1153, 1289, 1331 |
| FriOI | GRGCYC | 1 cut(s) | 1965 |
| Fsp4HI | GCNGC | 5 cut(s) | 815, 1217, 1594, 1707, 1911 |
| FspBI | CTAG | 6 cut(s) | 248, 621, 822, 1622, 1710, 1791 |
| GlaI | GCGC | 1 cut(s) | 1885 |
| GluI | GCNGC | 5 cut(s) | 815, 1217, 1594, 1707, 1911 |
| GsuI | CTGGAG | 1 cut(s) | 417 |
| HaeIII | GGCC | 5 cut(s) | 223, 817, 1371, 1524, 1761 |
| HhaI | GCGC | 1 cut(s) | 1886 |
| Hin6I | GCGC | 1 cut(s) | 1884 |
| HinP1I | GCGC | 1 cut(s) | 1884 |
| HincII | GTYRAC | 3 cut(s) | 915, 1000, 1450 |
| HindII | GTYRAC | 3 cut(s) | 915, 1000, 1450 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HinfI | GANTC | 8 cut(s) | 557, 897, 996, 1374, 1496, 1562, 1729, 1864 |
| HpaI | GTTAAC | 1 cut(s) | 1450 |
| HphI | GGTGA | 5 cut(s) | 823, 959, 1436, 1713, 1738 |
| Hpy166II | GTNNAC | 6 cut(s) | 245, 873, 915, 1000, 1450, 1996 |
| Hpy188III | TCNNGA | 8 cut(s) | 52, 62, 452, 967, 1124, 1365, 1378, 1700 |
| Hpy8I | GTNNAC | 6 cut(s) | 245, 873, 915, 1000, 1450, 1996 |
| HpyCH4III | ACNGT | 2 cut(s) | 881, 1156 |
| HpyCH4IV | ACGT | 1 cut(s) | 1854 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 633, 1298, 1599 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 1161, 1598, 1644, 2014 |
| HpySE526I | ACGT | 1 cut(s) | 1854 |
| HspAI | GCGC | 1 cut(s) | 1884 |
| Ksp22I | TGATCA | 1 cut(s) | 1351 |
| KspAI | GTTAAC | 1 cut(s) | 1450 |
| Kzo9I | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| LmnI | GCTCC | 2 cut(s) | 651, 1135 |
| Lsp1109I | GCAGC | 4 cut(s) | 1228, 1605, 1693, 1897 |
| LweI | GCATC | 3 cut(s) | 179, 480, 1162 |
| MaeI | CTAG | 6 cut(s) | 248, 621, 822, 1622, 1710, 1791 |
| MaeII | ACGT | 1 cut(s) | 1854 |
| MaeIII | GTNAC | 6 cut(s) | 524, 616, 1156, 1389, 1654, 1744 |
| MalI | GATC | 5 cut(s) | 56, 126, 1353, 1826, 1846 |
| MboI | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| MfeI | CAATTG | 1 cut(s) | 1148 |
| MflI | RGATCY | 2 cut(s) | 124, 1824 |
| MhlI | GDGCHC | 1 cut(s) | 1965 |
| MlsI | TGGCCA | 1 cut(s) | 223 |
| MluNI | TGGCCA | 1 cut(s) | 223 |
| MlyI | GAGTC | 3 cut(s) | 1005, 1368, 1505 |
| MmeI | TCCRAC | 2 cut(s) | 1085, 1164 |
| Mox20I | TGGCCA | 1 cut(s) | 223 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1084, 1733 |
| MscI | TGGCCA | 1 cut(s) | 223 |
| MslI | CAYNNNNRTG | 3 cut(s) | 297, 1661, 1970 |
| Msp20I | TGGCCA | 1 cut(s) | 223 |
| MspCI | CTTAAG | 1 cut(s) | 146 |
| MspR9I | CCNGG | 4 cut(s) | 266, 902, 1445, 1751 |
| MunI | CAATTG | 1 cut(s) | 1148 |
| Mva1269I | GAATGC | 1 cut(s) | 1595 |
| MvaI | CCWGG | 4 cut(s) | 266, 902, 1445, 1751 |
| MvnI | CGCG | 1 cut(s) | 1884 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 633, 1298, 1599 |
| NcoI | CCATGG | 1 cut(s) | 1525 |
| NdeII | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| NheI | GCTAGC | 2 cut(s) | 821, 1709 |
| NlaIV | GGNNCC | 2 cut(s) | 1131, 1826 |
| NmuCI | GTSAC | 4 cut(s) | 524, 616, 1654, 1744 |
| NspI | RCATGY | 5 cut(s) | 532, 1337, 1636, 1775, 1811 |
| NspV | TTCGAA | 1 cut(s) | 981 |
| PaeR7I | CTCGAG | 1 cut(s) | 1363 |
| PagI | TCATGA | 2 cut(s) | 1123, 1377 |
| PasI | CCCWGGG | 1 cut(s) | 1750 |
| PciI | ACATGT | 3 cut(s) | 528, 1632, 1807 |
| PctI | GAATGC | 1 cut(s) | 1595 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1084, 1733 |
| PfeI | GAWTC | 5 cut(s) | 557, 897, 1562, 1729, 1864 |
| PflFI | GACNNNGTC | 1 cut(s) | 859 |
| PfoI | TCCNGGA | 1 cut(s) | 900 |
| PkrI | GCNGC | 5 cut(s) | 816, 1218, 1595, 1708, 1912 |
| PleI | GAGTC | 3 cut(s) | 1004, 1368, 1504 |
| PmaCI | CACGTG | 1 cut(s) | 1855 |
| PmlI | CACGTG | 1 cut(s) | 1855 |
| PpsI | GAGTC | 3 cut(s) | 1004, 1368, 1504 |
| Ppu21I | YACGTR | 1 cut(s) | 1855 |
| PscI | ACATGT | 3 cut(s) | 528, 1632, 1807 |
| PsiI | TTATAA | 1 cut(s) | 1919 |
| Psp124BI | GAGCTC | 1 cut(s) | 1965 |
| Psp6I | CCWGG | 4 cut(s) | 264, 900, 1443, 1749 |
| PspCI | CACGTG | 1 cut(s) | 1855 |
| PspEI | GGTNACC | 1 cut(s) | 1389 |
| PspGI | CCWGG | 4 cut(s) | 264, 900, 1443, 1749 |
| PspN4I | GGNNCC | 2 cut(s) | 1131, 1826 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1977, 2009 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1499 |
| PsuI | RGATCY | 2 cut(s) | 124, 1824 |
| PsyI | GACNNNGTC | 1 cut(s) | 859 |
| RsaI | GTAC | 3 cut(s) | 438, 1776, 1986 |
| RsaNI | GTAC | 3 cut(s) | 437, 1775, 1985 |
| RseI | CAYNNNNRTG | 3 cut(s) | 297, 1661, 1970 |
| SacI | GAGCTC | 1 cut(s) | 1965 |
| SatI | GCNGC | 5 cut(s) | 815, 1217, 1594, 1707, 1911 |
| Sau3AI | GATC | 5 cut(s) | 54, 124, 1351, 1824, 1844 |
| SchI | GAGTC | 3 cut(s) | 1005, 1368, 1505 |
| ScrFI | CCNGG | 4 cut(s) | 266, 902, 1445, 1751 |
| SduI | GDGCHC | 1 cut(s) | 1965 |
| SfaNI | GCATC | 3 cut(s) | 179, 480, 1162 |
| SfcI | CTRYAG | 2 cut(s) | 1518, 1569 |
| Sfr274I | CTCGAG | 1 cut(s) | 1363 |
| SfuI | TTCGAA | 1 cut(s) | 981 |
| SlaI | CTCGAG | 1 cut(s) | 1363 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 297, 1661, 1970 |
| SmlI | CTYRAG | 3 cut(s) | 146, 665, 1363 |
| SmoI | CTYRAG | 3 cut(s) | 146, 665, 1363 |
| SsiI | CCGC | 1 cut(s) | 814 |
| SspMI | CTAG | 6 cut(s) | 248, 621, 822, 1622, 1710, 1791 |
| SstI | GAGCTC | 1 cut(s) | 1965 |
| StyD4I | CCNGG | 4 cut(s) | 264, 900, 1443, 1749 |
| StyI | CCWWGG | 1 cut(s) | 1525 |
| TaaI | ACNGT | 2 cut(s) | 881, 1156 |
| TaiI | ACGT | 1 cut(s) | 1857 |
| TaqI | TCGA | 3 cut(s) | 895, 981, 1364 |
| TatI | WGTACW | 1 cut(s) | 1984 |
| TauI | GCSGC | 1 cut(s) | 817 |
| TfiI | GAWTC | 5 cut(s) | 557, 897, 1562, 1729, 1864 |
| TscAI | CASTG | 3 cut(s) | 481, 619, 886 |
| TseFI | GTSAC | 4 cut(s) | 524, 616, 1654, 1744 |
| TseI | GCWGC | 4 cut(s) | 1216, 1593, 1706, 1910 |
| Tsp45I | GTSAC | 4 cut(s) | 524, 616, 1654, 1744 |
| TspGWI | ACGGA | 2 cut(s) | 287, 864 |
| TspRI | CASTG | 3 cut(s) | 481, 619, 886 |
| Tth111I | GACNNNGTC | 1 cut(s) | 859 |
| Vha464I | CTTAAG | 1 cut(s) | 146 |
| XceI | RCATGY | 5 cut(s) | 532, 1337, 1636, 1775, 1811 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1073 |
| XhoI | CTCGAG | 1 cut(s) | 1363 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1084, 1733 |
| XspI | CTAG | 6 cut(s) | 248, 621, 822, 1622, 1710, 1791 |