B3 domain-containing transcription factor VRN1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ParA | PF10609 | 40 - 96 | 4.7e-09 | NUBPL iron-transfer P-loop NTPase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 25 |
| AclWI | GGATC | 2 cut(s) | 139, 162 |
| AfaI | GTAC | 2 cut(s) | 115, 234 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 25 |
| AgsI | TTSAA | 1 cut(s) | 125 |
| AleI | CACNNNNGTG | 1 cut(s) | 103 |
| AluBI | AGCT | 1 cut(s) | 265 |
| AluI | AGCT | 1 cut(s) | 265 |
| AlwI | GGATC | 2 cut(s) | 139, 162 |
| AoxI | GGCC | 1 cut(s) | 45 |
| AseI | ATTAAT | 1 cut(s) | 171 |
| BccI | CCATC | 1 cut(s) | 131 |
| BglII | AGATCT | 1 cut(s) | 9 |
| BmsI | GCATC | 1 cut(s) | 214 |
| BpuEI | CTTGAG | 1 cut(s) | 321 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 25 |
| Bse1I | ACTGG | 1 cut(s) | 43 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 43 |
| BshFI | GGCC | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 65 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 47 |
| Bsp1407I | TGTACA | 1 cut(s) | 232 |
| Bsp143I | GATC | 3 cut(s) | 9, 131, 154 |
| BspANI | GGCC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspHI | TCATGA | 1 cut(s) | 255 |
| BspPI | GGATC | 2 cut(s) | 139, 162 |
| BsrGI | TGTACA | 1 cut(s) | 232 |
| BsrI | ACTGG | 1 cut(s) | 43 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssMI | GATC | 3 cut(s) | 9, 131, 154 |
| Bst4CI | ACNGT | 1 cut(s) | 346 |
| BstAUI | TGTACA | 1 cut(s) | 232 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 218 |
| BstDEI | CTNAG | 2 cut(s) | 6, 147 |
| BstKTI | GATC | 3 cut(s) | 12, 134, 157 |
| BstMBI | GATC | 3 cut(s) | 9, 131, 154 |
| BstX2I | RGATCY | 3 cut(s) | 9, 131, 154 |
| BstYI | RGATCY | 3 cut(s) | 9, 131, 154 |
| BsuRI | GGCC | 1 cut(s) | 47 |
| BtsIMutI | CAGTG | 2 cut(s) | 30, 342 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 218 |
| CciI | TCATGA | 1 cut(s) | 255 |
| Csp6I | GTAC | 2 cut(s) | 114, 233 |
| CviAII | CATG | 3 cut(s) | 236, 256, 310 |
| CviJI | RGCY | 7 cut(s) | 29, 42, 47, 179, 216, 265, 277 |
| CviKI_1 | RGCY | 7 cut(s) | 29, 42, 47, 179, 216, 265, 277 |
| CviQI | GTAC | 2 cut(s) | 114, 233 |
| DdeI | CTNAG | 2 cut(s) | 6, 147 |
| DpnI | GATC | 3 cut(s) | 11, 133, 156 |
| DpnII | GATC | 3 cut(s) | 9, 131, 154 |
| EcoT22I | ATGCAT | 1 cut(s) | 315 |
| FaeI | CATG | 3 cut(s) | 239, 259, 313 |
| FaiI | YATR | 6 cut(s) | 237, 257, 302, 311, 315, 332 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FatI | CATG | 3 cut(s) | 235, 255, 309 |
| HaeIII | GGCC | 1 cut(s) | 47 |
| HapII | CCGG | 1 cut(s) | 65 |
| Hin1II | CATG | 3 cut(s) | 239, 259, 313 |
| HpaII | CCGG | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 57 |
| Hpy188I | TCNGA | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 1 cut(s) | 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 57 |
| HpyAV | CCTTC | 2 cut(s) | 202, 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 98, 313 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 147 |
| Hsp92II | CATG | 3 cut(s) | 239, 259, 313 |
| Kzo9I | GATC | 3 cut(s) | 9, 131, 154 |
| LpnPI | CCDG | 8 cut(s) | 24, 77, 78, 122, 137, 161, 251, 337 |
| LweI | GCATC | 1 cut(s) | 214 |
| MaeIII | GTNAC | 2 cut(s) | 283, 340 |
| MalI | GATC | 3 cut(s) | 11, 133, 156 |
| MboI | GATC | 3 cut(s) | 9, 131, 154 |
| MflI | RGATCY | 3 cut(s) | 9, 131, 154 |
| MnlI | CCTC | 2 cut(s) | 58, 345 |
| Mph1103I | ATGCAT | 1 cut(s) | 315 |
| MseI | TTAA | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 103 |
| MspI | CCGG | 1 cut(s) | 65 |
| NdeII | GATC | 3 cut(s) | 9, 131, 154 |
| NlaIII | CATG | 3 cut(s) | 239, 259, 313 |
| NmuCI | GTSAC | 2 cut(s) | 283, 340 |
| NsiI | ATGCAT | 1 cut(s) | 315 |
| OliI | CACNNNNGTG | 1 cut(s) | 103 |
| PagI | TCATGA | 1 cut(s) | 255 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 25 |
| PshBI | ATTAAT | 1 cut(s) | 171 |
| PsuI | RGATCY | 3 cut(s) | 9, 131, 154 |
| RsaI | GTAC | 2 cut(s) | 115, 234 |
| RsaNI | GTAC | 2 cut(s) | 114, 233 |
| RseI | CAYNNNNRTG | 1 cut(s) | 103 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| Sau3AI | GATC | 3 cut(s) | 9, 131, 154 |
| SetI | ASST | 6 cut(s) | 78, 96, 213, 267, 295, 337 |
| SfaNI | GCATC | 1 cut(s) | 214 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 103 |
| SmlI | CTYRAG | 1 cut(s) | 336 |
| SmoI | CTYRAG | 1 cut(s) | 336 |
| SspI | AATATT | 2 cut(s) | 169, 247 |
| TaaI | ACNGT | 1 cut(s) | 346 |
| TatI | WGTACW | 1 cut(s) | 232 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TscAI | CASTG | 2 cut(s) | 30, 349 |
| TseFI | GTSAC | 2 cut(s) | 283, 340 |
| Tsp45I | GTSAC | 2 cut(s) | 283, 340 |
| TspDTI | ATGAA | 3 cut(s) | 221, 275, 298 |
| TspRI | CASTG | 2 cut(s) | 30, 349 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 25 |
| VspI | ATTAAT | 1 cut(s) | 171 |
| Zsp2I | ATGCAT | 1 cut(s) | 315 |