RLG00000017240

B3 domain-containing transcription factor VRN1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
14452888 .. 14455651
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017240

Sequence Viewer

Length: 1485 bp
ATGAATTCTTTTCGCTGGGAAAACGACGGCAGCCGGCCAATATGTTGTCCTCCCACTCCCCGTTTTATCCAGGTTATCTTGGATGATACTTCTAGAGACGTCAAACTTGGCATTCCAAAGAAATTTGTGAATGAATATGGTCAGTGTCTATCAAATTCAGTATGTCTTAAGCTTCCAAGTGGCTCTGAATGGGAAGTAGAAGTGACAAGAAGCAATGGAAAGGTTTGGTTTGAGAAGTGTTGGCCGGAGTTCTCAAAGTTTTACTCTCTTAGCGTCGGTGATTTTCTAGTTTTTGAATATGAAGGGAATTCTGAATTCCTCGTTTTCATATTTGATAGAAGCACCACAGAGATTGACTATCCCATAAAAAGGCCCAAGATGGAAGAAGCTCCTGAAGATGAATTTTCTGTTGAAATCTTGGAGGACATTCCACCTAGCCCAAAAACAAGGGAGAAAACTCCATTACCGTGTCGTCAATCTTACAAGAAAATGCAGACAAGTTTGACTGGTAAAGCAGACCAGATGTTTGAAAATGAGAACACCGAACCTTTTGAGAATCCAAAGAAAAACAAAGATTCCCATTGCTTTGCATCAAAAATCAAAAGTGTAGGTGGTTTTCCAGCAAAAATAGATGGCGGAGGCTCATCTAGCACTGAGAGTTTGCCTTCCTCCTGCATTGCCTTTACACTTCAGTCTGTGCCATCTGAGTTTTCCAAGAGACATCTTACAAAGAAGCCTGCTACTGTGATCCTTCAAGTTTTGGATGGAAGAACTTGGTCCGTTCAATTGAAGTATCATCATGAACGCTCAGAAGCTAGATTCCAGAGATGTTGGCCACTATTTGTAAGGGAGAATAATTTGAAAGTTGGTGATGCATGTGTCTTTACCTTAATTAACTGCATTGCATTTGTATTTGAAGTGGTCTTTCATCCTGCTGCAAAAGCTGCAAATTGCCCCTTGTCACCAGGTGGAAGAGGAGCAATTTATCAAGTCAAAAGTAAGGGAAGTCCGATAATAGAAGTAGAATCTGAATGTGGTGTGATATGTGGAATTGGCGTATGTGGCTCTCTCGAAACTGGCAAGAACAAAATGTCAAAGACTAGTGTGCAGGTTACTGAAAGGCCCTCTTCATCTTTGACGGCTCCAGGGGATAATCATCATGAAGCTGCCAACAACTTCGTCTCAGAGAATCCCTTTTTCAAAGTCACTTTGGTTTCCTCCCAAATGGAGAAGTCAGTTGTGCATGTACCAGCTAGTTTTGCTTGGAGTTTCACTAAAAGGAAGAAACAAAAAGTGATGCTTCAGGTCACAGATAGATTTTGGCCTGTGGATTTGATAGCATTTAAGCCATCTTTAGCTTCATTTTCTTCTGGCTGGGCCACATTTGTTGAGGAATATTCATTAAGAGTCGGAGATGTTTGCATATTTGAGCTTATGGAGATGAATGATGACATTATACTACAAGTTCATTTTTTCAGATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

495

Amino Acids

55.63

Weight (kDa)

6.77

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 28 - 113 5.2e-16 B3 DNA binding domain
B3 PF02362 230 - 299 2.3e-14 B3 DNA binding domain
B3 PF02362 399 - 492 6.8e-11 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 102
Acc36I ACCTGC 1 cut(s) 1099
AciI CCGC 1 cut(s) 636
AclWI GGATC 1 cut(s) 742
AcoI YGGCCR 3 cut(s) 35, 242, 833
AcsI RAATTY 6 cut(s) 4, 122, 154, 307, 314, 401
AcuI CTGAAG 3 cut(s) 414, 674, 1286
AcyI GRCGYC 1 cut(s) 99
AdeI CACNNNGTG 1 cut(s) 968
AfaI GTAC 1 cut(s) 1248
AfiI CCNNNNNNNGG 1 cut(s) 369
AflII CTTAAG 1 cut(s) 167
AgsI TTSAA 9 cut(s) 296, 413, 530, 755, 785, 790, 862, 917, 1201
AhlI ACTAGT 1 cut(s) 1100
AjnI CCWGG 3 cut(s) 69, 964, 1144
AluBI AGCT 8 cut(s) 172, 389, 815, 944, 1166, 1253, 1358, 1432
AluI AGCT 8 cut(s) 172, 389, 815, 944, 1166, 1253, 1358, 1432
Alw26I GTCTC 3 cut(s) 90, 712, 1186
AlwI GGATC 1 cut(s) 742
AoxI GGCC 7 cut(s) 35, 242, 371, 833, 1121, 1322, 1377
ApeKI GCWGC 4 cut(s) 30, 935, 944, 1166
ApoI RAATTY 6 cut(s) 4, 122, 154, 307, 314, 401
ArsI GACNNNNNNTTYG 2 cut(s) 509, 541
AspS9I GGNCC 4 cut(s) 372, 777, 1122, 1377
AsuHPI GGTGA 3 cut(s) 290, 881, 954
AvaII GGWCC 1 cut(s) 777
BalI TGGCCA 1 cut(s) 835
BbvI GCAGC 4 cut(s) 42, 922, 931, 1153
BccI CCATC 5 cut(s) 373, 626, 709, 758, 1357
BceAI ACGGC 2 cut(s) 43, 1155
BciT130I CCWGG 3 cut(s) 71, 966, 1146
BcoDI GTCTC 3 cut(s) 90, 712, 1186
BcuI ACTAGT 1 cut(s) 1100
BfaI CTAG 7 cut(s) 93, 287, 435, 648, 816, 1101, 1254
BfrI CTTAAG 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 1099
BisI GCNGC 4 cut(s) 31, 936, 945, 1167
BlsI GCNGC 4 cut(s) 32, 937, 946, 1168
Bme1390I CCNGG 3 cut(s) 71, 966, 1146
Bme18I GGWCC 1 cut(s) 777
BmgT120I GGNCC 4 cut(s) 372, 777, 1122, 1377
BmiI GGNNCC 1 cut(s) 1143
BmrFI CCNGG 3 cut(s) 71, 966, 1146
BmsI GCATC 3 cut(s) 599, 862, 1287
BpmI CTGGAG 1 cut(s) 1128
BsaBI GATNNNNATC 1 cut(s) 1155
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 1145
Bsc4I CCNNNNNNNGG 1 cut(s) 369
Bse118I RCCGGY 1 cut(s) 33
Bse1I ACTGG 2 cut(s) 511, 1081
Bse3DI GCAATG 4 cut(s) 220, 580, 675, 900
Bse8I GATNNNNATC 1 cut(s) 1155
BseBI CCWGG 3 cut(s) 71, 966, 1146
BseDI CCNNGG 1 cut(s) 1145
BseGI GGATG 3 cut(s) 88, 769, 928
BseJI GATNNNNATC 1 cut(s) 1155
BseLI CCNNNNNNNGG 1 cut(s) 369
BseMI GCAATG 4 cut(s) 220, 580, 675, 900
BseMII CTCAG 4 cut(s) 645, 696, 822, 1197
BseNI ACTGG 2 cut(s) 511, 1081
BseRI GAGGAG 1 cut(s) 990
BseXI GCAGC 4 cut(s) 42, 922, 931, 1153
BseYI CCCAGC 2 cut(s) 15, 1374
BsgI GTGCAG 1 cut(s) 1127
BshFI GGCC 7 cut(s) 37, 244, 373, 835, 1123, 1324, 1379
BsiSI CCGG 2 cut(s) 34, 245
BslI CCNNNNNNNGG 1 cut(s) 369
BsmAI GTCTC 3 cut(s) 90, 712, 1186
BsmBI CGTCTC 2 cut(s) 90, 1186
BsmI GAATGC 1 cut(s) 111
BsnI GGCC 7 cut(s) 37, 244, 373, 835, 1123, 1324, 1379
Bsp143I GATC 1 cut(s) 747
BspACI CCGC 1 cut(s) 636
BspANI GGCC 7 cut(s) 37, 244, 373, 835, 1123, 1324, 1379
BspCNI CTCAG 4 cut(s) 646, 697, 821, 1196
BspHI TCATGA 2 cut(s) 799, 1159
BspLI GGNNCC 1 cut(s) 1143
BspMI ACCTGC 1 cut(s) 1099
BspPI GGATC 1 cut(s) 742
BspTI CTTAAG 1 cut(s) 167
BsrDI GCAATG 4 cut(s) 220, 580, 675, 900
BsrFI RCCGGY 1 cut(s) 33
BsrI ACTGG 2 cut(s) 511, 1081
BssAI RCCGGY 1 cut(s) 33
BssECI CCNNGG 1 cut(s) 1145
BssMI GATC 1 cut(s) 747
BssNI GRCGYC 1 cut(s) 99
Bst2UI CCWGG 3 cut(s) 71, 966, 1146
Bst4CI ACNGT 2 cut(s) 468, 745
Bst6I CTCTTC 2 cut(s) 967, 1132
BstACI GRCGYC 1 cut(s) 99
BstAFI CTTAAG 1 cut(s) 167
BstAPI GCANNNNNTGC 1 cut(s) 944
BstC8I GCNNGC 2 cut(s) 35, 738
BstDEI CTNAG 5 cut(s) 269, 654, 705, 808, 1183
BstF5I GGATG 3 cut(s) 88, 769, 928
BstKTI GATC 1 cut(s) 750
BstMAI GTCTC 3 cut(s) 90, 712, 1186
BstMBI GATC 1 cut(s) 747
BstMWI GCNNNNNNNGC 5 cut(s) 648, 941, 944, 1062, 1259
BstNI CCWGG 3 cut(s) 71, 966, 1146
BstNSI RCATGY 2 cut(s) 879, 1247
BstSCI CCNGG 3 cut(s) 69, 964, 1144
BstV1I GCAGC 4 cut(s) 42, 922, 931, 1153
BsuRI GGCC 7 cut(s) 37, 244, 373, 835, 1123, 1324, 1379
BtsCI GGATG 3 cut(s) 88, 769, 928
BtsIMutI CAGTG 2 cut(s) 149, 651
BveI ACCTGC 1 cut(s) 1099
Cac8I GCNNGC 2 cut(s) 35, 738
CciI TCATGA 2 cut(s) 799, 1159
Cfr10I RCCGGY 1 cut(s) 33
Cfr13I GGNCC 4 cut(s) 372, 777, 1122, 1377
CseI GACGC 1 cut(s) 262
CsiI ACCWGGT 1 cut(s) 964
Csp6I GTAC 1 cut(s) 1247
CspCI CAANNNNNGTGG 4 cut(s) 334, 369, 1369, 1404
CviAII CATG 4 cut(s) 800, 876, 1160, 1244
CviQI GTAC 1 cut(s) 1247
DdeI CTNAG 5 cut(s) 269, 654, 705, 808, 1183
DpnI GATC 1 cut(s) 749
DpnII GATC 1 cut(s) 747
DraIII CACNNNGTG 1 cut(s) 968
EaeI YGGCCR 3 cut(s) 35, 242, 833
Eam1104I CTCTTC 2 cut(s) 967, 1132
EarI CTCTTC 2 cut(s) 967, 1132
EciI GGCGGA 1 cut(s) 651
Eco47I GGWCC 1 cut(s) 777
Eco57I CTGAAG 3 cut(s) 414, 674, 1286
EcoO109I RGGNCCY 1 cut(s) 1122
EcoRI GAATTC 3 cut(s) 4, 307, 314
EcoRII CCWGG 3 cut(s) 69, 964, 1144
EcoT22I ATGCAT 1 cut(s) 877
Esp3I CGTCTC 2 cut(s) 90, 1186
FaeI CATG 4 cut(s) 803, 879, 1163, 1247
FalI AAGNNNNNCTT 4 cut(s) 1111, 1143, 1284, 1316
FatI CATG 4 cut(s) 799, 875, 1159, 1243
Fnu4HI GCNGC 4 cut(s) 31, 936, 945, 1167
FokI GGATG 3 cut(s) 95, 776, 915
Fsp4HI GCNGC 4 cut(s) 31, 936, 945, 1167
FspBI CTAG 7 cut(s) 93, 287, 435, 648, 816, 1101, 1254
GluI GCNGC 4 cut(s) 31, 936, 945, 1167
GsaI CCCAGC 2 cut(s) 19, 1378
GsuI CTGGAG 1 cut(s) 1128
HaeIII GGCC 7 cut(s) 37, 244, 373, 835, 1123, 1324, 1379
HapII CCGG 2 cut(s) 34, 245
HgaI GACGC 1 cut(s) 262
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 4 cut(s) 803, 879, 1163, 1247
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 6 cut(s) 556, 575, 819, 1025, 1189, 1407
HpaII CCGG 2 cut(s) 34, 245
HphI GGTGA 3 cut(s) 290, 881, 954
Hpy188I TCNGA 9 cut(s) 187, 313, 706, 811, 1011, 1030, 1186, 1412, 1478
Hpy188III TCNNGA 6 cut(s) 93, 392, 800, 823, 1070, 1160
Hpy99I CGWCG 2 cut(s) 29, 278
HpyAV CCTTC 3 cut(s) 296, 675, 761
HpyCH4III ACNGT 2 cut(s) 468, 745
HpyCH4IV ACGT 1 cut(s) 99
HpyF10VI GCNNNNNNNGC 5 cut(s) 648, 941, 944, 1062, 1259
HpyF3I CTNAG 5 cut(s) 269, 654, 705, 808, 1183
HpySE526I ACGT 1 cut(s) 99
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 4 cut(s) 803, 879, 1163, 1247
KroI GCCGGC 1 cut(s) 33
KroNI GCCGGC 1 cut(s) 35
Kzo9I GATC 1 cut(s) 747
LmnI GCTCC 3 cut(s) 394, 977, 1147
Lsp1109I GCAGC 4 cut(s) 42, 922, 931, 1153
LweI GCATC 3 cut(s) 599, 862, 1287
MabI ACCWGGT 1 cut(s) 964
MaeI CTAG 7 cut(s) 93, 287, 435, 648, 816, 1101, 1254
MaeII ACGT 1 cut(s) 99
MaeIII GTNAC 5 cut(s) 202, 960, 1111, 1204, 1306
MalI GATC 1 cut(s) 749
MboI GATC 1 cut(s) 747
MboII GAAGA 7 cut(s) 395, 407, 780, 984, 1119, 1294, 1359
MfeI CAATTG 1 cut(s) 785
MlsI TGGCCA 1 cut(s) 835
MluNI TGGCCA 1 cut(s) 835
MlyI GAGTC 1 cut(s) 1416
MmeI TCCRAC 1 cut(s) 1390
MnlI CCTC 9 cut(s) 60, 329, 415, 632, 679, 968, 1135, 1228, 1384
Mox20I TGGCCA 1 cut(s) 835
Mph1103I ATGCAT 1 cut(s) 877
MroNI GCCGGC 1 cut(s) 33
MscI TGGCCA 1 cut(s) 835
MseI TTAA 5 cut(s) 168, 890, 894, 1344, 1403
MslI CAYNNNNRTG 1 cut(s) 466
Msp20I TGGCCA 1 cut(s) 835
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 2 cut(s) 34, 245
MspR9I CCNGG 3 cut(s) 71, 966, 1146
MunI CAATTG 1 cut(s) 785
Mva1269I GAATGC 1 cut(s) 111
MvaI CCWGG 3 cut(s) 71, 966, 1146
MwoI GCNNNNNNNGC 5 cut(s) 648, 941, 944, 1062, 1259
NaeI GCCGGC 1 cut(s) 35
NdeII GATC 1 cut(s) 747
NgoMIV GCCGGC 1 cut(s) 33
NlaIII CATG 4 cut(s) 803, 879, 1163, 1247
NlaIV GGNNCC 1 cut(s) 1143
NmuCI GTSAC 4 cut(s) 202, 960, 1204, 1306
NsiI ATGCAT 1 cut(s) 877
NspI RCATGY 2 cut(s) 879, 1247
PacI TTAATTAA 1 cut(s) 894
PagI TCATGA 2 cut(s) 799, 1159
PctI GAATGC 1 cut(s) 111
PdiI GCCGGC 1 cut(s) 35
PfeI GAWTC 5 cut(s) 556, 575, 819, 1025, 1189
PkrI GCNGC 4 cut(s) 32, 937, 946, 1168
PleI GAGTC 1 cut(s) 1415
PpsI GAGTC 1 cut(s) 1415
Psp6I CCWGG 3 cut(s) 69, 964, 1144
PspFI CCCAGC 2 cut(s) 15, 1374
PspGI CCWGG 3 cut(s) 69, 964, 1144
PspN4I GGNNCC 1 cut(s) 1143
PspPI GGNCC 4 cut(s) 372, 777, 1122, 1377
RsaI GTAC 1 cut(s) 1248
RsaNI GTAC 1 cut(s) 1247
RseI CAYNNNNRTG 1 cut(s) 466
SaqAI TTAA 5 cut(s) 168, 890, 894, 1344, 1403
SatI GCNGC 4 cut(s) 31, 936, 945, 1167
Sau3AI GATC 1 cut(s) 747
Sau96I GGNCC 4 cut(s) 372, 777, 1122, 1377
SchI GAGTC 1 cut(s) 1416
ScrFI CCNGG 3 cut(s) 71, 966, 1146
SexAI ACCWGGT 1 cut(s) 964
SfaNI GCATC 3 cut(s) 599, 862, 1287
SinI GGWCC 1 cut(s) 777
SmiMI CAYNNNNRTG 1 cut(s) 466
SmlI CTYRAG 1 cut(s) 167
SmoI CTYRAG 1 cut(s) 167
SpeI ACTAGT 1 cut(s) 1100
SsiI CCGC 1 cut(s) 636
SspI AATATT 1 cut(s) 1397
SspMI CTAG 7 cut(s) 93, 287, 435, 648, 816, 1101, 1254
StyD4I CCNGG 3 cut(s) 69, 964, 1144
TaaI ACNGT 2 cut(s) 468, 745
TaiI ACGT 1 cut(s) 102
TaqI TCGA 1 cut(s) 1071
TfiI GAWTC 5 cut(s) 556, 575, 819, 1025, 1189
Tru1I TTAA 5 cut(s) 168, 890, 894, 1344, 1403
Tru9I TTAA 5 cut(s) 168, 890, 894, 1344, 1403
TscAI CASTG 2 cut(s) 149, 658
TseFI GTSAC 4 cut(s) 202, 960, 1204, 1306
TseI GCWGC 4 cut(s) 30, 935, 944, 1166
Tsp45I GTSAC 4 cut(s) 202, 960, 1204, 1306
TspGWI ACGGA 1 cut(s) 769
TspRI CASTG 2 cut(s) 149, 658
Vha464I CTTAAG 1 cut(s) 167
VpaK11BI GGWCC 1 cut(s) 777
XapI RAATTY 6 cut(s) 4, 122, 154, 307, 314, 401
XbaI TCTAGA 1 cut(s) 92
XceI RCATGY 2 cut(s) 879, 1247
XspI CTAG 7 cut(s) 93, 287, 435, 648, 816, 1101, 1254
ZraI GACGTC 1 cut(s) 100
Zsp2I ATGCAT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.