B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 7 - 70 | 4.3e-06 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 2 cut(s) | 113, 499 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AcuI | CTGAAG | 1 cut(s) | 413 |
| AgsI | TTSAA | 5 cut(s) | 183, 287, 387, 448, 469 |
| AjiI | CACGTC | 1 cut(s) | 193 |
| AluBI | AGCT | 3 cut(s) | 381, 419, 425 |
| AluI | AGCT | 3 cut(s) | 381, 419, 425 |
| AoxI | GGCC | 2 cut(s) | 113, 499 |
| ApeKI | GCWGC | 1 cut(s) | 481 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| BbsI | GAAGAC | 1 cut(s) | 187 |
| BbvI | GCAGC | 1 cut(s) | 493 |
| BfaI | CTAG | 1 cut(s) | 158 |
| BfmI | CTRYAG | 1 cut(s) | 420 |
| BisI | GCNGC | 1 cut(s) | 482 |
| BlsI | GCNGC | 1 cut(s) | 483 |
| BmgBI | CACGTC | 1 cut(s) | 193 |
| BmsI | GCATC | 2 cut(s) | 381, 403 |
| BpiI | GAAGAC | 1 cut(s) | 187 |
| Bse1I | ACTGG | 1 cut(s) | 29 |
| BseGI | GGATG | 3 cut(s) | 301, 394, 396 |
| BseMII | CTCAG | 1 cut(s) | 65 |
| BseNI | ACTGG | 1 cut(s) | 29 |
| BseXI | GCAGC | 1 cut(s) | 493 |
| BshFI | GGCC | 2 cut(s) | 115, 501 |
| BsiSI | CCGG | 2 cut(s) | 116, 245 |
| BsnI | GGCC | 2 cut(s) | 115, 501 |
| BspANI | GGCC | 2 cut(s) | 115, 501 |
| BspCNI | CTCAG | 1 cut(s) | 66 |
| BspQI | GCTCTTC | 1 cut(s) | 432 |
| BsrI | ACTGG | 1 cut(s) | 29 |
| Bst6I | CTCTTC | 2 cut(s) | 9, 432 |
| BstDEI | CTNAG | 2 cut(s) | 38, 74 |
| BstF5I | GGATG | 3 cut(s) | 301, 394, 396 |
| BstSFI | CTRYAG | 1 cut(s) | 420 |
| BstV1I | GCAGC | 1 cut(s) | 493 |
| BstV2I | GAAGAC | 1 cut(s) | 187 |
| BsuRI | GGCC | 2 cut(s) | 115, 501 |
| BtrI | CACGTC | 1 cut(s) | 193 |
| BtsCI | GGATG | 3 cut(s) | 301, 394, 396 |
| CviAII | CATG | 3 cut(s) | 48, 348, 478 |
| DdeI | CTNAG | 2 cut(s) | 38, 74 |
| EaeI | YGGCCR | 2 cut(s) | 113, 499 |
| Eam1104I | CTCTTC | 2 cut(s) | 9, 432 |
| EarI | CTCTTC | 2 cut(s) | 9, 432 |
| Eco57I | CTGAAG | 1 cut(s) | 413 |
| EcoRI | GAATTC | 1 cut(s) | 178 |
| EcoT22I | ATGCAT | 1 cut(s) | 396 |
| FaeI | CATG | 3 cut(s) | 51, 351, 481 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 449, 481 |
| FatI | CATG | 3 cut(s) | 47, 347, 477 |
| Fnu4HI | GCNGC | 1 cut(s) | 482 |
| FokI | GGATG | 3 cut(s) | 308, 381, 403 |
| Fsp4HI | GCNGC | 1 cut(s) | 482 |
| FspBI | CTAG | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 482 |
| HaeIII | GGCC | 2 cut(s) | 115, 501 |
| HapII | CCGG | 2 cut(s) | 116, 245 |
| Hin1II | CATG | 3 cut(s) | 51, 351, 481 |
| HincII | GTYRAC | 1 cut(s) | 226 |
| HindII | GTYRAC | 1 cut(s) | 226 |
| HinfI | GANTC | 2 cut(s) | 186, 278 |
| HpaII | CCGG | 2 cut(s) | 116, 245 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 4 cut(s) | 58, 363, 432, 454 |
| Hpy188III | TCNNGA | 2 cut(s) | 140, 183 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| HpyAV | CCTTC | 4 cut(s) | 100, 167, 244, 369 |
| HpyCH4IV | ACGT | 1 cut(s) | 192 |
| HpyCH4V | TGCA | 4 cut(s) | 216, 394, 481, 521 |
| HpyF3I | CTNAG | 2 cut(s) | 38, 74 |
| HpySE526I | ACGT | 1 cut(s) | 192 |
| Hsp92II | CATG | 3 cut(s) | 51, 351, 481 |
| LguI | GCTCTTC | 1 cut(s) | 432 |
| LmnI | GCTCC | 1 cut(s) | 378 |
| LpnPI | CCDG | 4 cut(s) | 42, 129, 139, 258 |
| Lsp1109I | GCAGC | 1 cut(s) | 493 |
| LweI | GCATC | 2 cut(s) | 381, 403 |
| MaeI | CTAG | 1 cut(s) | 158 |
| MaeII | ACGT | 1 cut(s) | 192 |
| MboII | GAAGA | 8 cut(s) | 26, 90, 187, 281, 327, 330, 376, 419 |
| MluCI | AATT | 2 cut(s) | 178, 239 |
| MlyI | GAGTC | 1 cut(s) | 287 |
| MnlI | CCTC | 4 cut(s) | 85, 369, 471, 496 |
| Mph1103I | ATGCAT | 1 cut(s) | 396 |
| MspI | CCGG | 2 cut(s) | 116, 245 |
| NlaIII | CATG | 3 cut(s) | 51, 351, 481 |
| NsiI | ATGCAT | 1 cut(s) | 396 |
| PciSI | GCTCTTC | 1 cut(s) | 432 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 273 |
| PfeI | GAWTC | 1 cut(s) | 186 |
| PkrI | GCNGC | 1 cut(s) | 483 |
| PleI | GAGTC | 1 cut(s) | 286 |
| PpsI | GAGTC | 1 cut(s) | 286 |
| SapI | GCTCTTC | 1 cut(s) | 432 |
| SatI | GCNGC | 1 cut(s) | 482 |
| SchI | GAGTC | 1 cut(s) | 287 |
| SetI | ASST | 5 cut(s) | 96, 195, 383, 421, 427 |
| SfaNI | GCATC | 2 cut(s) | 381, 403 |
| SfcI | CTRYAG | 1 cut(s) | 420 |
| Sse9I | AATT | 2 cut(s) | 178, 239 |
| SspMI | CTAG | 1 cut(s) | 158 |
| TaiI | ACGT | 1 cut(s) | 195 |
| TasI | AATT | 2 cut(s) | 178, 239 |
| TfiI | GAWTC | 1 cut(s) | 186 |
| TseI | GCWGC | 1 cut(s) | 481 |
| TspDTI | ATGAA | 3 cut(s) | 17, 186, 187 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XspI | CTAG | 1 cut(s) | 158 |
| Zsp2I | ATGCAT | 1 cut(s) | 396 |