B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 883 |
| AccBSI | CCGCTC | 1 cut(s) | 423 |
| AciI | CCGC | 2 cut(s) | 423, 835 |
| AcoI | YGGCCR | 2 cut(s) | 214, 1091 |
| AcsI | RAATTY | 6 cut(s) | 90, 101, 133, 223, 333, 695 |
| AcuI | CTGAAG | 2 cut(s) | 825, 1055 |
| AfaI | GTAC | 2 cut(s) | 1017, 1182 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 197, 727, 997 |
| AflII | CTTAAG | 1 cut(s) | 146 |
| AflIII | ACRYGT | 1 cut(s) | 471 |
| AgsI | TTSAA | 8 cut(s) | 52, 299, 332, 350, 541, 695, 944, 982 |
| AjiI | CACGTC | 1 cut(s) | 436 |
| AjnI | CCWGG | 3 cut(s) | 726, 929, 990 |
| AluBI | AGCT | 8 cut(s) | 151, 305, 518, 530, 811, 848, 947, 1159 |
| AluI | AGCT | 8 cut(s) | 151, 305, 518, 530, 811, 848, 947, 1159 |
| Alw21I | GWGCWC | 1 cut(s) | 1161 |
| Alw26I | GTCTC | 2 cut(s) | 1043, 1134 |
| AoxI | GGCC | 4 cut(s) | 214, 905, 1000, 1091 |
| ApeKI | GCWGC | 3 cut(s) | 640, 947, 1106 |
| ApoI | RAATTY | 6 cut(s) | 90, 101, 133, 223, 333, 695 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 974 |
| AspS9I | GGNCC | 1 cut(s) | 1000 |
| AsuHPI | GGTGA | 1 cut(s) | 979 |
| BalI | TGGCCA | 1 cut(s) | 216 |
| BanII | GRGCYC | 1 cut(s) | 1161 |
| BauI | CACGAG | 1 cut(s) | 465 |
| BbsI | GAAGAC | 1 cut(s) | 631 |
| Bbv12I | GWGCWC | 1 cut(s) | 1161 |
| BbvI | GCAGC | 3 cut(s) | 652, 934, 1093 |
| BccI | CCATC | 1 cut(s) | 668 |
| BceAI | ACGGC | 1 cut(s) | 1078 |
| BciT130I | CCWGG | 3 cut(s) | 728, 931, 992 |
| BcoDI | GTCTC | 2 cut(s) | 1043, 1134 |
| BfaI | CTAG | 3 cut(s) | 354, 515, 1032 |
| BfmI | CTRYAG | 1 cut(s) | 572 |
| BfrI | CTTAAG | 1 cut(s) | 146 |
| BfuAI | ACCTGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 124 |
| BisI | GCNGC | 4 cut(s) | 424, 641, 948, 1107 |
| BlsI | GCNGC | 4 cut(s) | 425, 642, 949, 1108 |
| Bme1390I | CCNGG | 3 cut(s) | 728, 931, 992 |
| BmgBI | CACGTC | 1 cut(s) | 436 |
| BmgT120I | GGNCC | 1 cut(s) | 1000 |
| BmrFI | CCNGG | 3 cut(s) | 728, 931, 992 |
| BmsI | GCATC | 1 cut(s) | 1056 |
| BpiI | GAAGAC | 1 cut(s) | 631 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 211, 243 |
| BpmI | CTGGAG | 1 cut(s) | 83 |
| BsaJI | CCNNGG | 6 cut(s) | 261, 579, 727, 930, 990, 991 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 197, 727, 997 |
| Bse1I | ACTGG | 1 cut(s) | 1019 |
| BseBI | CCWGG | 3 cut(s) | 728, 931, 992 |
| BseDI | CCNNGG | 6 cut(s) | 261, 579, 727, 930, 990, 991 |
| BseGI | GGATG | 1 cut(s) | 679 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 197, 727, 997 |
| BseMII | CTCAG | 1 cut(s) | 11 |
| BseNI | ACTGG | 1 cut(s) | 1019 |
| BseXI | GCAGC | 3 cut(s) | 652, 934, 1093 |
| BshFI | GGCC | 4 cut(s) | 216, 907, 1002, 1093 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1161 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 197, 727, 997 |
| BsmAI | GTCTC | 2 cut(s) | 1043, 1134 |
| BsmBI | CGTCTC | 1 cut(s) | 1134 |
| BsnI | GGCC | 4 cut(s) | 216, 907, 1002, 1093 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1161 |
| Bsp143I | GATC | 2 cut(s) | 54, 124 |
| BspACI | CCGC | 2 cut(s) | 423, 835 |
| BspANI | GGCC | 4 cut(s) | 216, 907, 1002, 1093 |
| BspCNI | CTCAG | 1 cut(s) | 12 |
| BspMI | ACCTGC | 1 cut(s) | 883 |
| BspQI | GCTCTTC | 1 cut(s) | 525 |
| BspTI | CTTAAG | 1 cut(s) | 146 |
| BsrBI | CCGCTC | 1 cut(s) | 423 |
| BsrI | ACTGG | 1 cut(s) | 1019 |
| BssECI | CCNNGG | 6 cut(s) | 261, 579, 727, 930, 990, 991 |
| BssMI | GATC | 2 cut(s) | 54, 124 |
| BssSI | CACGAG | 1 cut(s) | 465 |
| Bst2BI | CACGAG | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 3 cut(s) | 728, 931, 992 |
| Bst4CI | ACNGT | 3 cut(s) | 512, 1009, 1063 |
| Bst6I | CTCTTC | 2 cut(s) | 15, 525 |
| BstAFI | CTTAAG | 1 cut(s) | 146 |
| BstC8I | GCNNGC | 2 cut(s) | 645, 952 |
| BstDEI | CTNAG | 2 cut(s) | 20, 662 |
| BstDSI | CCRYGG | 1 cut(s) | 261 |
| BstF5I | GGATG | 1 cut(s) | 679 |
| BstKTI | GATC | 2 cut(s) | 57, 127 |
| BstMAI | GTCTC | 2 cut(s) | 1043, 1134 |
| BstMBI | GATC | 2 cut(s) | 54, 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1112 |
| BstNI | CCWGG | 3 cut(s) | 728, 931, 992 |
| BstNSI | RCATGY | 3 cut(s) | 390, 475, 1016 |
| BstSCI | CCNGG | 3 cut(s) | 726, 929, 990 |
| BstSFI | CTRYAG | 1 cut(s) | 572 |
| BstV1I | GCAGC | 3 cut(s) | 652, 934, 1093 |
| BstV2I | GAAGAC | 1 cut(s) | 631 |
| BstX2I | RGATCY | 1 cut(s) | 124 |
| BstYI | RGATCY | 1 cut(s) | 124 |
| BsuRI | GGCC | 4 cut(s) | 216, 907, 1002, 1093 |
| BtgI | CCRYGG | 1 cut(s) | 261 |
| BtgZI | GCGATG | 1 cut(s) | 789 |
| BtrI | CACGTC | 1 cut(s) | 436 |
| BtsCI | GGATG | 1 cut(s) | 679 |
| BtsIMutI | CAGTG | 1 cut(s) | 1068 |
| BveI | ACCTGC | 1 cut(s) | 883 |
| Cac8I | GCNNGC | 2 cut(s) | 645, 952 |
| Cfr13I | GGNCC | 1 cut(s) | 1000 |
| Csp6I | GTAC | 2 cut(s) | 1016, 1181 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 250, 285 |
| CviAII | CATG | 3 cut(s) | 387, 472, 1013 |
| CviQI | GTAC | 2 cut(s) | 1016, 1181 |
| DdeI | CTNAG | 2 cut(s) | 20, 662 |
| DpnI | GATC | 2 cut(s) | 56, 126 |
| DpnII | GATC | 2 cut(s) | 54, 124 |
| EaeI | YGGCCR | 2 cut(s) | 214, 1091 |
| Eam1104I | CTCTTC | 2 cut(s) | 15, 525 |
| EarI | CTCTTC | 2 cut(s) | 15, 525 |
| Ecl136II | GAGCTC | 1 cut(s) | 1159 |
| Eco147I | AGGCCT | 1 cut(s) | 907 |
| Eco24I | GRGCYC | 1 cut(s) | 1161 |
| Eco53kI | GAGCTC | 1 cut(s) | 1159 |
| Eco57I | CTGAAG | 2 cut(s) | 825, 1055 |
| EcoICRI | GAGCTC | 1 cut(s) | 1159 |
| EcoRI | GAATTC | 2 cut(s) | 223, 695 |
| EcoRII | CCWGG | 3 cut(s) | 726, 929, 990 |
| EcoT38I | GRGCYC | 1 cut(s) | 1161 |
| Esp3I | CGTCTC | 1 cut(s) | 1134 |
| FaeI | CATG | 3 cut(s) | 390, 475, 1016 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 895, 927, 959, 991 |
| FatI | CATG | 3 cut(s) | 386, 471, 1012 |
| Fnu4HI | GCNGC | 4 cut(s) | 424, 641, 948, 1107 |
| FokI | GGATG | 1 cut(s) | 686 |
| FriOI | GRGCYC | 1 cut(s) | 1161 |
| Fsp4HI | GCNGC | 4 cut(s) | 424, 641, 948, 1107 |
| FspBI | CTAG | 3 cut(s) | 354, 515, 1032 |
| GluI | GCNGC | 4 cut(s) | 424, 641, 948, 1107 |
| GsuI | CTGGAG | 1 cut(s) | 83 |
| HaeIII | GGCC | 4 cut(s) | 216, 907, 1002, 1093 |
| Hin1II | CATG | 3 cut(s) | 390, 475, 1016 |
| HincII | GTYRAC | 2 cut(s) | 741, 1024 |
| HindII | GTYRAC | 2 cut(s) | 741, 1024 |
| HindIII | AAGCTT | 1 cut(s) | 809 |
| HinfI | GANTC | 2 cut(s) | 970, 1036 |
| HpaI | GTTAAC | 1 cut(s) | 1024 |
| HphI | GGTGA | 1 cut(s) | 979 |
| Hpy166II | GTNNAC | 2 cut(s) | 741, 1024 |
| Hpy188I | TCNGA | 7 cut(s) | 21, 96, 166, 445, 583, 613, 844 |
| Hpy188III | TCNNGA | 7 cut(s) | 52, 62, 75, 467, 621, 793, 941 |
| Hpy8I | GTNNAC | 2 cut(s) | 741, 1024 |
| HpyAV | CCTTC | 7 cut(s) | 201, 363, 564, 745, 918, 985, 1130 |
| HpyCH4III | ACNGT | 3 cut(s) | 512, 1009, 1063 |
| HpyCH4IV | ACGT | 2 cut(s) | 435, 1143 |
| HpyCH4V | TGCA | 8 cut(s) | 243, 647, 864, 950, 1012, 1109, 1115, 1149 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1112 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 662 |
| HpySE526I | ACGT | 2 cut(s) | 435, 1143 |
| Hsp92II | CATG | 3 cut(s) | 390, 475, 1016 |
| KspAI | GTTAAC | 1 cut(s) | 1024 |
| Kzo9I | GATC | 2 cut(s) | 54, 124 |
| LguI | GCTCTTC | 1 cut(s) | 525 |
| LmnI | GCTCC | 1 cut(s) | 156 |
| Lsp1109I | GCAGC | 3 cut(s) | 652, 934, 1093 |
| LweI | GCATC | 1 cut(s) | 1056 |
| MaeI | CTAG | 3 cut(s) | 354, 515, 1032 |
| MaeII | ACGT | 2 cut(s) | 435, 1143 |
| MaeIII | GTNAC | 5 cut(s) | 467, 650, 895, 985, 1190 |
| MalI | GATC | 2 cut(s) | 56, 126 |
| MbiI | CCGCTC | 1 cut(s) | 423 |
| MboI | GATC | 2 cut(s) | 54, 124 |
| MboII | GAAGA | 8 cut(s) | 109, 311, 323, 512, 636, 690, 903, 970 |
| MflI | RGATCY | 1 cut(s) | 124 |
| MhlI | GDGCHC | 1 cut(s) | 1161 |
| MlsI | TGGCCA | 1 cut(s) | 216 |
| MluNI | TGGCCA | 1 cut(s) | 216 |
| MlyI | GAGTC | 1 cut(s) | 1045 |
| MnlI | CCTC | 8 cut(s) | 27, 58, 213, 334, 402, 474, 589, 915 |
| Mox20I | TGGCCA | 1 cut(s) | 216 |
| MroXI | GAANNNNTTC | 1 cut(s) | 974 |
| MscI | TGGCCA | 1 cut(s) | 216 |
| MseI | TTAA | 8 cut(s) | 87, 147, 182, 636, 798, 936, 1023, 1130 |
| MslI | CAYNNNNRTG | 4 cut(s) | 234, 284, 385, 1166 |
| Msp20I | TGGCCA | 1 cut(s) | 216 |
| MspCI | CTTAAG | 1 cut(s) | 146 |
| MspR9I | CCNGG | 3 cut(s) | 728, 931, 992 |
| MvaI | CCWGG | 3 cut(s) | 728, 931, 992 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1112 |
| NdeII | GATC | 2 cut(s) | 54, 124 |
| NlaIII | CATG | 3 cut(s) | 390, 475, 1016 |
| NmuCI | GTSAC | 3 cut(s) | 467, 985, 1190 |
| NspI | RCATGY | 3 cut(s) | 390, 475, 1016 |
| PasI | CCCWGGG | 1 cut(s) | 991 |
| PceI | AGGCCT | 1 cut(s) | 907 |
| PciI | ACATGT | 1 cut(s) | 471 |
| PciSI | GCTCTTC | 1 cut(s) | 525 |
| PdmI | GAANNNNTTC | 1 cut(s) | 974 |
| PfeI | GAWTC | 1 cut(s) | 970 |
| PkrI | GCNGC | 4 cut(s) | 425, 642, 949, 1108 |
| PleI | GAGTC | 1 cut(s) | 1044 |
| PpsI | GAGTC | 1 cut(s) | 1044 |
| PscI | ACATGT | 1 cut(s) | 471 |
| Psp124BI | GAGCTC | 1 cut(s) | 1161 |
| Psp6I | CCWGG | 3 cut(s) | 726, 929, 990 |
| PspGI | CCWGG | 3 cut(s) | 726, 929, 990 |
| PspPI | GGNCC | 1 cut(s) | 1000 |
| PsuI | RGATCY | 1 cut(s) | 124 |
| RsaI | GTAC | 2 cut(s) | 1017, 1182 |
| RsaNI | GTAC | 2 cut(s) | 1016, 1181 |
| RseI | CAYNNNNRTG | 4 cut(s) | 234, 284, 385, 1166 |
| SacI | GAGCTC | 1 cut(s) | 1161 |
| SapI | GCTCTTC | 1 cut(s) | 525 |
| SaqAI | TTAA | 8 cut(s) | 87, 147, 182, 636, 798, 936, 1023, 1130 |
| SatI | GCNGC | 4 cut(s) | 424, 641, 948, 1107 |
| Sau3AI | GATC | 2 cut(s) | 54, 124 |
| Sau96I | GGNCC | 1 cut(s) | 1000 |
| SchI | GAGTC | 1 cut(s) | 1045 |
| ScrFI | CCNGG | 3 cut(s) | 728, 931, 992 |
| SduI | GDGCHC | 1 cut(s) | 1161 |
| SfaNI | GCATC | 1 cut(s) | 1056 |
| SfcI | CTRYAG | 1 cut(s) | 572 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 234, 284, 385, 1166 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| SseBI | AGGCCT | 1 cut(s) | 907 |
| SsiI | CCGC | 2 cut(s) | 423, 835 |
| SspI | AATATT | 1 cut(s) | 883 |
| SspMI | CTAG | 3 cut(s) | 354, 515, 1032 |
| SstI | GAGCTC | 1 cut(s) | 1161 |
| StuI | AGGCCT | 1 cut(s) | 907 |
| StyD4I | CCNGG | 3 cut(s) | 726, 929, 990 |
| TaaI | ACNGT | 3 cut(s) | 512, 1009, 1063 |
| TaiI | ACGT | 2 cut(s) | 438, 1146 |
| TaqI | TCGA | 1 cut(s) | 76 |
| TatI | WGTACW | 1 cut(s) | 1180 |
| TauI | GCSGC | 1 cut(s) | 426 |
| TfiI | GAWTC | 1 cut(s) | 970 |
| Tru1I | TTAA | 8 cut(s) | 87, 147, 182, 636, 798, 936, 1023, 1130 |
| Tru9I | TTAA | 8 cut(s) | 87, 147, 182, 636, 798, 936, 1023, 1130 |
| TscAI | CASTG | 1 cut(s) | 1068 |
| TseFI | GTSAC | 3 cut(s) | 467, 985, 1190 |
| TseI | GCWGC | 3 cut(s) | 640, 947, 1106 |
| Tsp45I | GTSAC | 3 cut(s) | 467, 985, 1190 |
| TspDTI | ATGAA | 7 cut(s) | 125, 324, 512, 546, 903, 951, 1184 |
| TspGWI | ACGGA | 1 cut(s) | 278 |
| TspRI | CASTG | 1 cut(s) | 1068 |
| Vha464I | CTTAAG | 1 cut(s) | 146 |
| XapI | RAATTY | 6 cut(s) | 90, 101, 133, 223, 333, 695 |
| XceI | RCATGY | 3 cut(s) | 390, 475, 1016 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 728 |
| XmnI | GAANNNNTTC | 1 cut(s) | 974 |
| XspI | CTAG | 3 cut(s) | 354, 515, 1032 |