B3 domain-containing
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 187 |
| AclI | AACGTT | 1 cut(s) | 380 |
| AclWI | GGATC | 1 cut(s) | 717 |
| AcsI | RAATTY | 4 cut(s) | 360, 494, 800, 1100 |
| AcuI | CTGAAG | 2 cut(s) | 828, 863 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1020 |
| AgsI | TTSAA | 8 cut(s) | 325, 356, 428, 593, 701, 898, 1100, 1123 |
| AjnI | CCWGG | 2 cut(s) | 838, 1164 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 433, 465, 734, 766 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 807, 839 |
| AluBI | AGCT | 4 cut(s) | 302, 342, 875, 887 |
| AluI | AGCT | 4 cut(s) | 302, 342, 875, 887 |
| Alw26I | GTCTC | 4 cut(s) | 108, 173, 519, 772 |
| AlwI | GGATC | 1 cut(s) | 717 |
| AoxI | GGCC | 1 cut(s) | 452 |
| ApeKI | GCWGC | 4 cut(s) | 370, 406, 1000, 1067 |
| ApoI | RAATTY | 4 cut(s) | 360, 494, 800, 1100 |
| AspA2I | CCTAGG | 1 cut(s) | 827 |
| AspS9I | GGNCC | 2 cut(s) | 815, 842 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 618, 656, 1142 |
| AvaII | GGWCC | 2 cut(s) | 815, 842 |
| AvrII | CCTAGG | 1 cut(s) | 827 |
| AxyI | CCTNAGG | 1 cut(s) | 819 |
| BbvI | GCAGC | 4 cut(s) | 357, 418, 1012, 1079 |
| BccI | CCATC | 4 cut(s) | 233, 536, 635, 1022 |
| BciT130I | CCWGG | 2 cut(s) | 840, 1166 |
| BclI | TGATCA | 1 cut(s) | 46 |
| BcoDI | GTCTC | 4 cut(s) | 108, 173, 519, 772 |
| BfaI | CTAG | 4 cut(s) | 411, 783, 828, 1005 |
| BfmI | CTRYAG | 1 cut(s) | 1065 |
| BglII | AGATCT | 1 cut(s) | 72 |
| BisI | GCNGC | 4 cut(s) | 371, 407, 1001, 1068 |
| BlnI | CCTAGG | 1 cut(s) | 827 |
| BlsI | GCNGC | 4 cut(s) | 372, 408, 1002, 1069 |
| Bme1390I | CCNGG | 2 cut(s) | 840, 1166 |
| Bme18I | GGWCC | 2 cut(s) | 815, 842 |
| BmgT120I | GGNCC | 2 cut(s) | 815, 842 |
| BmiI | GGNNCC | 1 cut(s) | 825 |
| BmrFI | CCNGG | 2 cut(s) | 840, 1166 |
| BmsI | GCATC | 4 cut(s) | 257, 764, 825, 1123 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| BsaI | GGTCTC | 1 cut(s) | 772 |
| BsaJI | CCNNGG | 1 cut(s) | 827 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1020 |
| Bse1I | ACTGG | 2 cut(s) | 952, 1093 |
| Bse21I | CCTNAGG | 1 cut(s) | 819 |
| BseBI | CCWGG | 2 cut(s) | 840, 1166 |
| BseDI | CCNNGG | 1 cut(s) | 827 |
| BseGI | GGATG | 5 cut(s) | 88, 661, 755, 1014, 1161 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1020 |
| BseMII | CTCAG | 3 cut(s) | 90, 119, 810 |
| BseNI | ACTGG | 2 cut(s) | 952, 1093 |
| BseRI | GAGGAG | 1 cut(s) | 176 |
| BseXI | GCAGC | 4 cut(s) | 357, 418, 1012, 1079 |
| BshFI | GGCC | 1 cut(s) | 454 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1020 |
| BsmAI | GTCTC | 4 cut(s) | 108, 173, 519, 772 |
| BsnI | GGCC | 1 cut(s) | 454 |
| Bso31I | GGTCTC | 1 cut(s) | 772 |
| Bsp143I | GATC | 3 cut(s) | 46, 72, 709 |
| BspANI | GGCC | 1 cut(s) | 454 |
| BspCNI | CTCAG | 3 cut(s) | 89, 118, 811 |
| BspLI | GGNNCC | 1 cut(s) | 825 |
| BspMAI | CTGCAG | 1 cut(s) | 1069 |
| BspPI | GGATC | 1 cut(s) | 717 |
| BspQI | GCTCTTC | 2 cut(s) | 481, 882 |
| BspTNI | GGTCTC | 1 cut(s) | 772 |
| BsrI | ACTGG | 2 cut(s) | 952, 1093 |
| BssECI | CCNNGG | 1 cut(s) | 827 |
| BssMI | GATC | 3 cut(s) | 46, 72, 709 |
| BssT1I | CCWWGG | 1 cut(s) | 827 |
| Bst2UI | CCWGG | 2 cut(s) | 840, 1166 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| Bst6I | CTCTTC | 3 cut(s) | 481, 669, 882 |
| BstC8I | GCNNGC | 2 cut(s) | 26, 969 |
| BstDEI | CTNAG | 3 cut(s) | 76, 105, 819 |
| BstF5I | GGATG | 5 cut(s) | 88, 661, 755, 1014, 1161 |
| BstKTI | GATC | 3 cut(s) | 49, 75, 712 |
| BstMAI | GTCTC | 4 cut(s) | 108, 173, 519, 772 |
| BstMBI | GATC | 3 cut(s) | 46, 72, 709 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 255, 977 |
| BstNI | CCWGG | 2 cut(s) | 840, 1166 |
| BstNSI | RCATGY | 2 cut(s) | 28, 1013 |
| BstSCI | CCNGG | 2 cut(s) | 838, 1164 |
| BstSFI | CTRYAG | 1 cut(s) | 1065 |
| BstV1I | GCAGC | 4 cut(s) | 357, 418, 1012, 1079 |
| BstX2I | RGATCY | 1 cut(s) | 72 |
| BstYI | RGATCY | 1 cut(s) | 72 |
| Bsu36I | CCTNAGG | 1 cut(s) | 819 |
| BsuRI | GGCC | 1 cut(s) | 454 |
| BtsCI | GGATG | 5 cut(s) | 88, 661, 755, 1014, 1161 |
| BtsIMutI | CAGTG | 1 cut(s) | 945 |
| Cac8I | GCNNGC | 2 cut(s) | 26, 969 |
| Cfr13I | GGNCC | 2 cut(s) | 815, 842 |
| CviAII | CATG | 4 cut(s) | 25, 334, 1010, 1147 |
| DdeI | CTNAG | 3 cut(s) | 76, 105, 819 |
| DpnI | GATC | 3 cut(s) | 48, 74, 711 |
| DpnII | GATC | 3 cut(s) | 46, 72, 709 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 187 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 187 |
| Eam1104I | CTCTTC | 3 cut(s) | 481, 669, 882 |
| EarI | CTCTTC | 3 cut(s) | 481, 669, 882 |
| Eco130I | CCWWGG | 1 cut(s) | 827 |
| Eco31I | GGTCTC | 1 cut(s) | 772 |
| Eco32I | GATATC | 1 cut(s) | 989 |
| Eco47I | GGWCC | 2 cut(s) | 815, 842 |
| Eco57I | CTGAAG | 2 cut(s) | 828, 863 |
| Eco81I | CCTNAGG | 1 cut(s) | 819 |
| EcoO109I | RGGNCCY | 1 cut(s) | 815 |
| EcoRII | CCWGG | 2 cut(s) | 838, 1164 |
| EcoRV | GATATC | 1 cut(s) | 989 |
| EcoT14I | CCWWGG | 1 cut(s) | 827 |
| EcoT22I | ATGCAT | 1 cut(s) | 339 |
| ErhI | CCWWGG | 1 cut(s) | 827 |
| FaeI | CATG | 4 cut(s) | 28, 337, 1013, 1150 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 433, 465 |
| FatI | CATG | 4 cut(s) | 24, 333, 1009, 1146 |
| FauNDI | CATATG | 1 cut(s) | 469 |
| FbaI | TGATCA | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 4 cut(s) | 371, 407, 1001, 1068 |
| FokI | GGATG | 5 cut(s) | 95, 668, 742, 1001, 1148 |
| Fsp4HI | GCNGC | 4 cut(s) | 371, 407, 1001, 1068 |
| FspBI | CTAG | 4 cut(s) | 411, 783, 828, 1005 |
| GluI | GCNGC | 4 cut(s) | 371, 407, 1001, 1068 |
| HaeIII | GGCC | 1 cut(s) | 454 |
| Hin1II | CATG | 4 cut(s) | 28, 337, 1013, 1150 |
| HincII | GTYRAC | 2 cut(s) | 1051, 1152 |
| HindII | GTYRAC | 2 cut(s) | 1051, 1152 |
| HinfI | GANTC | 3 cut(s) | 130, 692, 763 |
| HphI | GGTGA | 4 cut(s) | 56, 618, 656, 1142 |
| Hpy166II | GTNNAC | 2 cut(s) | 1051, 1152 |
| Hpy188I | TCNGA | 6 cut(s) | 79, 108, 199, 729, 882, 1193 |
| Hpy188III | TCNNGA | 5 cut(s) | 50, 68, 388, 789, 919 |
| Hpy8I | GTNNAC | 2 cut(s) | 1051, 1152 |
| Hpy99I | CGWCG | 1 cut(s) | 93 |
| HpyAV | CCTTC | 4 cut(s) | 35, 435, 803, 1028 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4IV | ACGT | 2 cut(s) | 380, 1057 |
| HpyCH4V | TGCA | 7 cut(s) | 337, 406, 611, 905, 1028, 1067, 1108 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 255, 977 |
| HpyF3I | CTNAG | 3 cut(s) | 76, 105, 819 |
| HpySE526I | ACGT | 2 cut(s) | 380, 1057 |
| Hsp92II | CATG | 4 cut(s) | 28, 337, 1013, 1150 |
| Ksp22I | TGATCA | 1 cut(s) | 46 |
| Kzo9I | GATC | 3 cut(s) | 46, 72, 709 |
| LguI | GCTCTTC | 2 cut(s) | 481, 882 |
| LmnI | GCTCC | 1 cut(s) | 163 |
| Lsp1109I | GCAGC | 4 cut(s) | 357, 418, 1012, 1079 |
| LweI | GCATC | 4 cut(s) | 257, 764, 825, 1123 |
| MaeI | CTAG | 4 cut(s) | 411, 783, 828, 1005 |
| MaeII | ACGT | 2 cut(s) | 380, 1057 |
| MalI | GATC | 3 cut(s) | 48, 74, 711 |
| MboI | GATC | 3 cut(s) | 46, 72, 709 |
| MfeI | CAATTG | 1 cut(s) | 696 |
| MflI | RGATCY | 1 cut(s) | 72 |
| MluCI | AATT | 7 cut(s) | 154, 360, 461, 494, 696, 800, 1100 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MmeI | TCCRAC | 1 cut(s) | 488 |
| Mph1103I | ATGCAT | 1 cut(s) | 339 |
| MseI | TTAA | 2 cut(s) | 459, 996 |
| MslI | CAYNNNNRTG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 2 cut(s) | 840, 1166 |
| MunI | CAATTG | 1 cut(s) | 696 |
| MvaI | CCWGG | 2 cut(s) | 840, 1166 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 255, 977 |
| NdeI | CATATG | 1 cut(s) | 469 |
| NdeII | GATC | 3 cut(s) | 46, 72, 709 |
| NlaIII | CATG | 4 cut(s) | 28, 337, 1013, 1150 |
| NlaIV | GGNNCC | 1 cut(s) | 825 |
| NsiI | ATGCAT | 1 cut(s) | 339 |
| NspI | RCATGY | 2 cut(s) | 28, 1013 |
| PaeI | GCATGC | 1 cut(s) | 28 |
| PciSI | GCTCTTC | 2 cut(s) | 481, 882 |
| PfeI | GAWTC | 2 cut(s) | 692, 763 |
| PkrI | GCNGC | 4 cut(s) | 372, 408, 1002, 1069 |
| PleI | GAGTC | 1 cut(s) | 138 |
| PpsI | GAGTC | 1 cut(s) | 138 |
| PpuMI | RGGWCCY | 1 cut(s) | 815 |
| Psp1406I | AACGTT | 1 cut(s) | 380 |
| Psp5II | RGGWCCY | 1 cut(s) | 815 |
| Psp6I | CCWGG | 2 cut(s) | 838, 1164 |
| PspGI | CCWGG | 2 cut(s) | 838, 1164 |
| PspN4I | GGNNCC | 1 cut(s) | 825 |
| PspPI | GGNCC | 2 cut(s) | 815, 842 |
| PspPPI | RGGWCCY | 1 cut(s) | 815 |
| PstI | CTGCAG | 1 cut(s) | 1069 |
| PsuI | RGATCY | 1 cut(s) | 72 |
| RseI | CAYNNNNRTG | 1 cut(s) | 23 |
| SapI | GCTCTTC | 2 cut(s) | 481, 882 |
| SaqAI | TTAA | 2 cut(s) | 459, 996 |
| SatI | GCNGC | 4 cut(s) | 371, 407, 1001, 1068 |
| Sau3AI | GATC | 3 cut(s) | 46, 72, 709 |
| Sau96I | GGNCC | 2 cut(s) | 815, 842 |
| SchI | GAGTC | 1 cut(s) | 139 |
| ScrFI | CCNGG | 2 cut(s) | 840, 1166 |
| SfaNI | GCATC | 4 cut(s) | 257, 764, 825, 1123 |
| SfcI | CTRYAG | 1 cut(s) | 1065 |
| SinI | GGWCC | 2 cut(s) | 815, 842 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 23 |
| SmlI | CTYRAG | 1 cut(s) | 68 |
| SmoI | CTYRAG | 1 cut(s) | 68 |
| SphI | GCATGC | 1 cut(s) | 28 |
| Sse9I | AATT | 7 cut(s) | 154, 360, 461, 494, 696, 800, 1100 |
| SspMI | CTAG | 4 cut(s) | 411, 783, 828, 1005 |
| StyD4I | CCNGG | 2 cut(s) | 838, 1164 |
| StyI | CCWWGG | 1 cut(s) | 827 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TaiI | ACGT | 2 cut(s) | 383, 1060 |
| TaqI | TCGA | 2 cut(s) | 30, 88 |
| TaqII | GACCGA | 1 cut(s) | 1169 |
| TasI | AATT | 7 cut(s) | 154, 360, 461, 494, 696, 800, 1100 |
| TfiI | GAWTC | 2 cut(s) | 692, 763 |
| Tru1I | TTAA | 2 cut(s) | 459, 996 |
| Tru9I | TTAA | 2 cut(s) | 459, 996 |
| TscAI | CASTG | 1 cut(s) | 952 |
| TseI | GCWGC | 4 cut(s) | 370, 406, 1000, 1067 |
| TspDTI | ATGAA | 9 cut(s) | 218, 486, 675, 681, 687, 705, 755, 915, 1135 |
| TspRI | CASTG | 1 cut(s) | 952 |
| VpaK11BI | GGWCC | 2 cut(s) | 815, 842 |
| XapI | RAATTY | 4 cut(s) | 360, 494, 800, 1100 |
| XceI | RCATGY | 2 cut(s) | 28, 1013 |
| XmaJI | CCTAGG | 1 cut(s) | 827 |
| XspI | CTAG | 4 cut(s) | 411, 783, 828, 1005 |
| Zsp2I | ATGCAT | 1 cut(s) | 339 |