B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1373 |
| AccI | GTMKAC | 1 cut(s) | 171 |
| AclWI | GGATC | 1 cut(s) | 1071 |
| AcoI | YGGCCR | 3 cut(s) | 41, 251, 545 |
| AcsI | RAATTY | 5 cut(s) | 703, 839, 1154, 1328, 1454 |
| AcuI | CTGAAG | 1 cut(s) | 1182 |
| AfaI | GTAC | 1 cut(s) | 572 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 66, 1166, 1374 |
| AflII | CTTAAG | 1 cut(s) | 746 |
| AgsI | TTSAA | 8 cut(s) | 511, 670, 701, 938, 1055, 1252, 1454, 1477 |
| AjnI | CCWGG | 2 cut(s) | 973, 1192 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 37, 69, 778, 810, 1088, 1120 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1161, 1193 |
| AluBI | AGCT | 8 cut(s) | 115, 132, 181, 219, 647, 687, 1229, 1241 |
| AluI | AGCT | 8 cut(s) | 115, 132, 181, 219, 647, 687, 1229, 1241 |
| Alw21I | GWGCWC | 1 cut(s) | 1243 |
| Alw26I | GTCTC | 4 cut(s) | 99, 530, 864, 1126 |
| AlwI | GGATC | 1 cut(s) | 1071 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 980 |
| Ama87I | CYCGRG | 1 cut(s) | 116 |
| AoxI | GGCC | 5 cut(s) | 41, 251, 545, 797, 977 |
| ApeKI | GCWGC | 6 cut(s) | 178, 715, 751, 1354, 1418, 1421 |
| ApoI | RAATTY | 5 cut(s) | 703, 839, 1154, 1328, 1454 |
| AspA2I | CCTAGG | 1 cut(s) | 1181 |
| AspS9I | GGNCC | 4 cut(s) | 191, 977, 1169, 1196 |
| AsuC2I | CCSGG | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 5 cut(s) | 29, 413, 963, 1010, 1496 |
| AvaI | CYCGRG | 1 cut(s) | 116 |
| AvaII | GGWCC | 3 cut(s) | 191, 1169, 1196 |
| AvrII | CCTAGG | 1 cut(s) | 1181 |
| AxyI | CCTNAGG | 1 cut(s) | 1173 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 554, 587 |
| BalI | TGGCCA | 1 cut(s) | 547 |
| BanII | GRGCYC | 1 cut(s) | 1243 |
| BbsI | GAAGAC | 1 cut(s) | 45 |
| Bbv12I | GWGCWC | 1 cut(s) | 1243 |
| BbvI | GCAGC | 6 cut(s) | 190, 702, 763, 1366, 1405, 1433 |
| BccI | CCATC | 4 cut(s) | 338, 881, 989, 1376 |
| BciT130I | CCWGG | 2 cut(s) | 975, 1194 |
| BclI | TGATCA | 2 cut(s) | 34, 403 |
| BcnI | CCSGG | 1 cut(s) | 67 |
| BcoDI | GTCTC | 4 cut(s) | 99, 530, 864, 1126 |
| BfaI | CTAG | 5 cut(s) | 167, 321, 756, 1182, 1359 |
| BfmI | CTRYAG | 2 cut(s) | 981, 1419 |
| BfrI | CTTAAG | 1 cut(s) | 746 |
| BfuAI | ACCTGC | 1 cut(s) | 1373 |
| BglII | AGATCT | 2 cut(s) | 154, 429 |
| BisI | GCNGC | 6 cut(s) | 179, 716, 752, 1355, 1419, 1422 |
| BlnI | CCTAGG | 1 cut(s) | 1181 |
| BlsI | GCNGC | 6 cut(s) | 180, 717, 753, 1356, 1420, 1423 |
| Bme1390I | CCNGG | 3 cut(s) | 67, 975, 1194 |
| Bme18I | GGWCC | 3 cut(s) | 191, 1169, 1196 |
| BmeT110I | CYCGRG | 1 cut(s) | 116 |
| BmgT120I | GGNCC | 4 cut(s) | 191, 977, 1169, 1196 |
| BmiI | GGNNCC | 1 cut(s) | 1179 |
| BmrFI | CCNGG | 3 cut(s) | 67, 975, 1194 |
| BmsI | GCATC | 4 cut(s) | 602, 1118, 1179, 1477 |
| BpiI | GAAGAC | 1 cut(s) | 45 |
| BpuEI | CTTGAG | 3 cut(s) | 62, 299, 446 |
| BpuMI | CCSGG | 1 cut(s) | 67 |
| BsaJI | CCNNGG | 3 cut(s) | 65, 974, 1181 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 66, 1166, 1374 |
| Bse118I | RCCGGY | 1 cut(s) | 39 |
| Bse1I | ACTGG | 2 cut(s) | 1306, 1447 |
| Bse21I | CCTNAGG | 1 cut(s) | 1173 |
| BseBI | CCWGG | 2 cut(s) | 975, 1194 |
| BseDI | CCNNGG | 3 cut(s) | 65, 974, 1181 |
| BseGI | GGATG | 4 cut(s) | 445, 1015, 1109, 1368 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 66, 1166, 1374 |
| BseMII | CTCAG | 2 cut(s) | 447, 1164 |
| BseNI | ACTGG | 2 cut(s) | 1306, 1447 |
| BseRI | GAGGAG | 1 cut(s) | 533 |
| BseXI | GCAGC | 6 cut(s) | 190, 702, 763, 1366, 1405, 1433 |
| BshFI | GGCC | 5 cut(s) | 43, 253, 547, 799, 979 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1243 |
| BsiHKCI | CYCGRG | 1 cut(s) | 116 |
| BsiSI | CCGG | 4 cut(s) | 22, 40, 67, 254 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 66, 1166, 1374 |
| BsmAI | GTCTC | 4 cut(s) | 99, 530, 864, 1126 |
| BsmI | GAATGC | 1 cut(s) | 387 |
| BsnI | GGCC | 5 cut(s) | 43, 253, 547, 799, 979 |
| BsoBI | CYCGRG | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1243 |
| Bsp143I | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| BspANI | GGCC | 5 cut(s) | 43, 253, 547, 799, 979 |
| BspCNI | CTCAG | 2 cut(s) | 446, 1165 |
| BspLI | GGNNCC | 1 cut(s) | 1179 |
| BspMAI | CTGCAG | 2 cut(s) | 985, 1423 |
| BspMI | ACCTGC | 1 cut(s) | 1373 |
| BspPI | GGATC | 1 cut(s) | 1071 |
| BspQI | GCTCTTC | 1 cut(s) | 826 |
| BspTI | CTTAAG | 1 cut(s) | 746 |
| BsrFI | RCCGGY | 1 cut(s) | 39 |
| BsrI | ACTGG | 2 cut(s) | 1306, 1447 |
| BssAI | RCCGGY | 1 cut(s) | 39 |
| BssECI | CCNNGG | 3 cut(s) | 65, 974, 1181 |
| BssMI | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| BssNAI | GTATAC | 1 cut(s) | 172 |
| BssT1I | CCWWGG | 1 cut(s) | 1181 |
| Bst1107I | GTATAC | 1 cut(s) | 172 |
| Bst2UI | CCWGG | 2 cut(s) | 975, 1194 |
| Bst4CI | ACNGT | 2 cut(s) | 481, 1517 |
| Bst6I | CTCTTC | 2 cut(s) | 826, 1023 |
| BstAFI | CTTAAG | 1 cut(s) | 746 |
| BstC8I | GCNNGC | 3 cut(s) | 251, 981, 1323 |
| BstDEI | CTNAG | 3 cut(s) | 264, 433, 1173 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| BstF5I | GGATG | 4 cut(s) | 445, 1015, 1109, 1368 |
| BstKTI | GATC | 6 cut(s) | 37, 50, 157, 406, 432, 1066 |
| BstMAI | GTCTC | 4 cut(s) | 99, 530, 864, 1126 |
| BstMBI | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 600, 1331 |
| BstNI | CCWGG | 2 cut(s) | 975, 1194 |
| BstNSI | RCATGY | 1 cut(s) | 1367 |
| BstSCI | CCNGG | 3 cut(s) | 65, 973, 1192 |
| BstSFI | CTRYAG | 2 cut(s) | 981, 1419 |
| BstV1I | GCAGC | 6 cut(s) | 190, 702, 763, 1366, 1405, 1433 |
| BstV2I | GAAGAC | 1 cut(s) | 45 |
| BstX2I | RGATCY | 2 cut(s) | 154, 429 |
| BstYI | RGATCY | 2 cut(s) | 154, 429 |
| BstZ17I | GTATAC | 1 cut(s) | 172 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1173 |
| BsuRI | GGCC | 5 cut(s) | 43, 253, 547, 799, 979 |
| BtsCI | GGATG | 4 cut(s) | 445, 1015, 1109, 1368 |
| BtsIMutI | CAGTG | 1 cut(s) | 1299 |
| BveI | ACCTGC | 1 cut(s) | 1373 |
| Cac8I | GCNNGC | 3 cut(s) | 251, 981, 1323 |
| CaiI | CAGNNNCTG | 1 cut(s) | 980 |
| Cfr10I | RCCGGY | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 4 cut(s) | 191, 977, 1169, 1196 |
| Csp6I | GTAC | 1 cut(s) | 571 |
| CviAII | CATG | 5 cut(s) | 186, 679, 1244, 1364, 1501 |
| CviQI | GTAC | 1 cut(s) | 571 |
| DdeI | CTNAG | 3 cut(s) | 264, 433, 1173 |
| DpnI | GATC | 6 cut(s) | 36, 49, 156, 405, 431, 1065 |
| DpnII | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| EaeI | YGGCCR | 3 cut(s) | 41, 251, 545 |
| Eam1104I | CTCTTC | 2 cut(s) | 826, 1023 |
| EarI | CTCTTC | 2 cut(s) | 826, 1023 |
| Ecl136II | GAGCTC | 1 cut(s) | 1241 |
| Eco130I | CCWWGG | 1 cut(s) | 1181 |
| Eco24I | GRGCYC | 1 cut(s) | 1243 |
| Eco32I | GATATC | 1 cut(s) | 1343 |
| Eco47I | GGWCC | 3 cut(s) | 191, 1169, 1196 |
| Eco53kI | GAGCTC | 1 cut(s) | 1241 |
| Eco57I | CTGAAG | 1 cut(s) | 1182 |
| Eco81I | CCTNAGG | 1 cut(s) | 1173 |
| Eco88I | CYCGRG | 1 cut(s) | 116 |
| EcoICRI | GAGCTC | 1 cut(s) | 1241 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| EcoO109I | RGGNCCY | 2 cut(s) | 977, 1169 |
| EcoRII | CCWGG | 2 cut(s) | 973, 1192 |
| EcoRV | GATATC | 1 cut(s) | 1343 |
| EcoT14I | CCWWGG | 1 cut(s) | 1181 |
| EcoT22I | ATGCAT | 1 cut(s) | 684 |
| EcoT38I | GRGCYC | 1 cut(s) | 1243 |
| ErhI | CCWWGG | 1 cut(s) | 1181 |
| FaeI | CATG | 5 cut(s) | 189, 682, 1247, 1367, 1504 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 37, 69, 778, 810 |
| FatI | CATG | 5 cut(s) | 185, 678, 1243, 1363, 1500 |
| FauNDI | CATATG | 1 cut(s) | 814 |
| FbaI | TGATCA | 2 cut(s) | 34, 403 |
| FblI | GTMKAC | 1 cut(s) | 171 |
| Fnu4HI | GCNGC | 6 cut(s) | 179, 716, 752, 1355, 1419, 1422 |
| FokI | GGATG | 4 cut(s) | 452, 1022, 1096, 1355 |
| FriOI | GRGCYC | 1 cut(s) | 1243 |
| Fsp4HI | GCNGC | 6 cut(s) | 179, 716, 752, 1355, 1419, 1422 |
| FspBI | CTAG | 5 cut(s) | 167, 321, 756, 1182, 1359 |
| GluI | GCNGC | 6 cut(s) | 179, 716, 752, 1355, 1419, 1422 |
| HaeIII | GGCC | 5 cut(s) | 43, 253, 547, 799, 979 |
| HapII | CCGG | 4 cut(s) | 22, 40, 67, 254 |
| Hin1II | CATG | 5 cut(s) | 189, 682, 1247, 1367, 1504 |
| HincII | GTYRAC | 2 cut(s) | 1405, 1506 |
| HindII | GTYRAC | 2 cut(s) | 1405, 1506 |
| HinfI | GANTC | 6 cut(s) | 121, 210, 317, 487, 1046, 1117 |
| HpaII | CCGG | 4 cut(s) | 22, 40, 67, 254 |
| HphI | GGTGA | 5 cut(s) | 29, 413, 963, 1010, 1496 |
| Hpy166II | GTNNAC | 3 cut(s) | 172, 1405, 1506 |
| Hpy188I | TCNGA | 5 cut(s) | 91, 436, 556, 1083, 1236 |
| Hpy8I | GTNNAC | 3 cut(s) | 172, 1405, 1506 |
| Hpy99I | CGWCG | 1 cut(s) | 450 |
| HpyAV | CCTTC | 5 cut(s) | 305, 392, 780, 1157, 1382 |
| HpyCH4III | ACNGT | 2 cut(s) | 481, 1517 |
| HpyCH4IV | ACGT | 2 cut(s) | 565, 1411 |
| HpyCH4V | TGCA | 7 cut(s) | 178, 682, 956, 983, 1259, 1382, 1421 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 600, 1331 |
| HpyF3I | CTNAG | 3 cut(s) | 264, 433, 1173 |
| HpySE526I | ACGT | 2 cut(s) | 565, 1411 |
| Hsp92II | CATG | 5 cut(s) | 189, 682, 1247, 1367, 1504 |
| Ksp22I | TGATCA | 2 cut(s) | 34, 403 |
| Kzo9I | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| LguI | GCTCTTC | 1 cut(s) | 826 |
| LmnI | GCTCC | 1 cut(s) | 520 |
| Lsp1109I | GCAGC | 6 cut(s) | 190, 702, 763, 1366, 1405, 1433 |
| LweI | GCATC | 4 cut(s) | 602, 1118, 1179, 1477 |
| MaeI | CTAG | 5 cut(s) | 167, 321, 756, 1182, 1359 |
| MaeII | ACGT | 2 cut(s) | 565, 1411 |
| MalI | GATC | 6 cut(s) | 36, 49, 156, 405, 431, 1065 |
| MboI | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| MfeI | CAATTG | 1 cut(s) | 1050 |
| MflI | RGATCY | 2 cut(s) | 154, 429 |
| MhlI | GDGCHC | 1 cut(s) | 1243 |
| MlsI | TGGCCA | 1 cut(s) | 547 |
| MluNI | TGGCCA | 1 cut(s) | 547 |
| MlyI | GAGTC | 2 cut(s) | 204, 496 |
| MmeI | TCCRAC | 1 cut(s) | 833 |
| Mox20I | TGGCCA | 1 cut(s) | 547 |
| Mph1103I | ATGCAT | 1 cut(s) | 684 |
| MscI | TGGCCA | 1 cut(s) | 547 |
| MseI | TTAA | 4 cut(s) | 747, 771, 804, 1350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 380 |
| Msp20I | TGGCCA | 1 cut(s) | 547 |
| MspCI | CTTAAG | 1 cut(s) | 746 |
| MspI | CCGG | 4 cut(s) | 22, 40, 67, 254 |
| MspR9I | CCNGG | 3 cut(s) | 67, 975, 1194 |
| MunI | CAATTG | 1 cut(s) | 1050 |
| Mva1269I | GAATGC | 1 cut(s) | 387 |
| MvaI | CCWGG | 2 cut(s) | 975, 1194 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 600, 1331 |
| NciI | CCSGG | 1 cut(s) | 67 |
| NdeI | CATATG | 1 cut(s) | 814 |
| NdeII | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| NlaIII | CATG | 5 cut(s) | 189, 682, 1247, 1367, 1504 |
| NlaIV | GGNNCC | 1 cut(s) | 1179 |
| NsiI | ATGCAT | 1 cut(s) | 684 |
| NspI | RCATGY | 1 cut(s) | 1367 |
| PciSI | GCTCTTC | 1 cut(s) | 826 |
| PctI | GAATGC | 1 cut(s) | 387 |
| PfeI | GAWTC | 4 cut(s) | 121, 317, 1046, 1117 |
| PkrI | GCNGC | 6 cut(s) | 180, 717, 753, 1356, 1420, 1423 |
| PleI | GAGTC | 2 cut(s) | 204, 495 |
| PpsI | GAGTC | 2 cut(s) | 204, 495 |
| PpuMI | RGGWCCY | 1 cut(s) | 1169 |
| Psp124BI | GAGCTC | 1 cut(s) | 1243 |
| Psp5II | RGGWCCY | 1 cut(s) | 1169 |
| Psp6I | CCWGG | 2 cut(s) | 973, 1192 |
| PspGI | CCWGG | 2 cut(s) | 973, 1192 |
| PspN4I | GGNNCC | 1 cut(s) | 1179 |
| PspPI | GGNCC | 4 cut(s) | 191, 977, 1169, 1196 |
| PspPPI | RGGWCCY | 1 cut(s) | 1169 |
| PstI | CTGCAG | 2 cut(s) | 985, 1423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 980 |
| PsuI | RGATCY | 2 cut(s) | 154, 429 |
| RsaI | GTAC | 1 cut(s) | 572 |
| RsaNI | GTAC | 1 cut(s) | 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 380 |
| SacI | GAGCTC | 1 cut(s) | 1243 |
| SapI | GCTCTTC | 1 cut(s) | 826 |
| SaqAI | TTAA | 4 cut(s) | 747, 771, 804, 1350 |
| SatI | GCNGC | 6 cut(s) | 179, 716, 752, 1355, 1419, 1422 |
| Sau3AI | GATC | 6 cut(s) | 34, 47, 154, 403, 429, 1063 |
| Sau96I | GGNCC | 4 cut(s) | 191, 977, 1169, 1196 |
| SchI | GAGTC | 2 cut(s) | 204, 496 |
| ScrFI | CCNGG | 3 cut(s) | 67, 975, 1194 |
| SduI | GDGCHC | 1 cut(s) | 1243 |
| SfaNI | GCATC | 4 cut(s) | 602, 1118, 1179, 1477 |
| SfcI | CTRYAG | 2 cut(s) | 981, 1419 |
| SinI | GGWCC | 3 cut(s) | 191, 1169, 1196 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 380 |
| SmlI | CTYRAG | 4 cut(s) | 77, 278, 425, 746 |
| SmoI | CTYRAG | 4 cut(s) | 77, 278, 425, 746 |
| SspMI | CTAG | 5 cut(s) | 167, 321, 756, 1182, 1359 |
| SstI | GAGCTC | 1 cut(s) | 1243 |
| StyD4I | CCNGG | 3 cut(s) | 65, 973, 1192 |
| StyI | CCWWGG | 1 cut(s) | 1181 |
| TaaI | ACNGT | 2 cut(s) | 481, 1517 |
| TaiI | ACGT | 2 cut(s) | 568, 1414 |
| TaqI | TCGA | 2 cut(s) | 387, 445 |
| TaqII | GACCGA | 1 cut(s) | 1523 |
| TfiI | GAWTC | 4 cut(s) | 121, 317, 1046, 1117 |
| Tru1I | TTAA | 4 cut(s) | 747, 771, 804, 1350 |
| Tru9I | TTAA | 4 cut(s) | 747, 771, 804, 1350 |
| TscAI | CASTG | 1 cut(s) | 1306 |
| TseI | GCWGC | 6 cut(s) | 178, 715, 751, 1354, 1418, 1421 |
| TspRI | CASTG | 1 cut(s) | 1306 |
| Vha464I | CTTAAG | 1 cut(s) | 746 |
| VpaK11BI | GGWCC | 3 cut(s) | 191, 1169, 1196 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| XapI | RAATTY | 5 cut(s) | 703, 839, 1154, 1328, 1454 |
| XceI | RCATGY | 1 cut(s) | 1367 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 581 |
| XmaJI | CCTAGG | 1 cut(s) | 1181 |
| XmiI | GTMKAC | 1 cut(s) | 171 |
| XspI | CTAG | 5 cut(s) | 167, 321, 756, 1182, 1359 |
| Zsp2I | ATGCAT | 1 cut(s) | 684 |