Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0007545

Physical Location & Seq

Genomic Coordinates Reverse (-)

15455348 .. 15465156

Gene Structure 9809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG163500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGACTTCTCTTTGCCGGAAAAACGATCCACGTCCAAAGTTTTCTGCTACCAAATTCAGTTTCATTAAGTTTATTTCGGAGAGCAGTTCTAAAGAAACAAACCTTAAAGTTCCTACGAGTTATGTGAAGAAATATCAGGAGAAATATGGAAAAGAGCTATCAAAGGTTGTACATCTTAAGCTTCCATGTGGTACAGAATGGGAAGTAGAAGTCACAGAGATTGACTATCCTATCAAAAGCCCTAATATGCAAGAAAATGGTGTAAATGATCATTCTCCACCGGCTAGTCCTCCACTGCCTCAAAAGAAGAAAGAAGCAACTTCAAGTGGTGGGAAAAAGGATCTTTCTGCCGAAAAGGATGAGGGAGGCAAGTCAAGAACTACTCAAAGATCCCAAAAACCAACAACCGAGGTTCCTATGAGGATGCACTCCTCGGCTACAGGTGGAAAAGCTACAGCTCTTCAGAGAGCTAAAGAATTCAAGTCTAGAAACCCTTCCTGTTTCTTGGTTATCATGCACGCCTCATATATCAAAGGAACTATGCTCTGGCTGTCAACTGAGATCTCCATGAATATGTTGACATATCTTGGTAAGAATTCTGGTAATGTTAGCCTTAGTGTTTCGGAAGGGAGTACAAGGGGACTTTGGACTGTTGAAATGAAATATGATACAGAAAGAGCCACATTCCGGTTGCAGAGTGGTTGGAATAAATTTGTTCAAGGAAATAATTTGAATGCTGGTGATGTTTGTGGTTTTATGTTAATTGACGAAATTGGACTTTTATTTGAAGTTAATATTTTCCGCAGAACAGAAGTTGCAACCTCATCACCAGGCTATGATGAATATGATGTGGATGATAAAGATGACCATGGGCTTCATGATGCCAATGATGACTATGCAGCTGATGAAAACAGGCACCGTTCTTTCAGAACTGTCCTACTGAAGTCTTCTATCAGTCATTGTTTGTGGTTATGTTCTAGATTTTCTCAGAAACATCTCAGTGATAAGCCTAGTAATGCCGAGCTGCATGTTCCTGGTGGGACGACAACTTGGTGTGTTGGATTGAAATATGAGGTTGGGAGAAAAAGAGCCAAATTTCAGTCTGGTTGGACCAAATTTGTGAGAGACAATAATTTGAACATTGGAGATGAGTGTGTGTTTGTGTTGACTGATGAAAATATATTTTCATTTGAAGTTGTCATAGTAGCTGCAAAATCCACCTTGCCACCAGACATTGATGATGCTAATGGCAACATCAAAGATGATGAGGATAATAAGAATGAGGATGATGATGATACTAGTGATAATGAAGGTGATCATTCTGATGATGACAACGACCACAGCGATGAAGATGATGAATATTCAACAGCACAACAGCTTCACAAGAGAAAGAGATCAAGTTCAAGTACCAAAAGTAGCATCAGAGATGTTGGTGCTTCGACTAGTACTGGACAATTTTTAAAACGACGACCTGGTGTTCCAAGGAGTATGCATCCAATAAGGACCACGAAAAATGATATAGCTCTTCAGAGAGCTAAAGTCTTCAAGTATGTAGAACCTCATTTTGTGGTTCCAATGACTGCCAGAAATGTCCACGAATCTTTTCTTAAGTTGCCATCTGCTTTTGTCCAGAAACATCTTGATAAGAGGCCTAGTCATGTCAGCCTGTGGGGTTCAAATGACATATATTGGCCTGTCGAGTTACATTTCAGAAAAGGAGCTAGCTTCCAGGGCGGTTGGATTGAATTTGTGCAGCGCCATAATCTGAAAGAGGGTGATGCATGTGGTTTTGAGTTGACTGAGAAGAGAAAGTTTCTGTTTGATGTTCACATTTTTCGCACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

615

Amino Acids

69.53

Weight (kDa)

7.07

Isoelectric Point (pI)

47.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	196 - 269	3e-10	B3 DNA binding domain
B3	PF02362	311 - 401	6e-13	B3 DNA binding domain
B3	PF02362	522 - 614	5.1e-13	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007545)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0103451 RchiOBHm_Chr2g0103461 RchiOBHm_Chr2g0103471 RchiOBHm_Chr2g0103481
rosa_laevigata	RLG00000017237 RLG00000017238 RLG00000017239
rosa_multiflora	Rmu_co8300361.1_g000001 Rmu_co8395735.1_g000001 Rmu_sc0001852.1_g000027 Rmu_sc0011039.1_g000006
rosa_roxburghii	Rroxscaffold_2G00139600 Rroxscaffold_2G00139610 Rroxscaffold_2G00139620
rosa_rugosa	Rorug02G0115000 Rorug02G0115100
rosa_samantha	Rh2AG163400 Rh2AG163500 Rh2AG163600 Rh2BG170500 Rh2BG170600 Rh2BG170700 Rh2DG169000
rosa_wichuraiana	Rw2G012850 Rw2G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	915
AciI	CCGC	2 cut(s)	802, 1734
AclWI	GGATC	3 cut(s)	20, 348, 384
AcsI	RAATTY	7 cut(s)	53, 476, 595, 710, 1094, 1115, 1745
AcuI	CTGAAG	3 cut(s)	446, 962, 1511
AfaI	GTAC	5 cut(s)	171, 193, 634, 1408, 1447
AfiI	CCNNNNNNNGG	1 cut(s)	687
AflII	CTTAAG	2 cut(s)	176, 1607
AhlI	ACTAGT	2 cut(s)	1298, 1442
AjiI	CACGTC	1 cut(s)	32
AjnI	CCWGG	4 cut(s)	829, 1033, 1471, 1728
AjuI	GAANNNNNNNTTGG	2 cut(s)	44, 76
Alw26I	GTCTC	1 cut(s)	1119
AlwI	GGATC	3 cut(s)	20, 348, 384
AoxI	GGCC	2 cut(s)	1649, 1691
ApeKI	GCWGC	4 cut(s)	899, 1024, 1208, 1753
ApoI	RAATTY	7 cut(s)	53, 476, 595, 710, 1094, 1115, 1745
Asp700I	GAANNNNTTC	2 cut(s)	493, 1602
AspLEI	GCGC	1 cut(s)	1758
AspS9I	GGNCC	2 cut(s)	1110, 1503
AsuHPI	GGTGA	4 cut(s)	752, 819, 1325, 1787
AsuNHI	GCTAGC	1 cut(s)	1721
AvaII	GGWCC	2 cut(s)	1110, 1503
BanI	GGYRCC	1 cut(s)	915
BbsI	GAAGAC	2 cut(s)	939, 1534
BbvI	GCAGC	4 cut(s)	911, 1011, 1195, 1765
BccI	CCATC	1 cut(s)	1624
BciT130I	CCWGG	4 cut(s)	831, 1035, 1473, 1730
BclI	TGATCA	2 cut(s)	268, 1315
BcoDI	GTCTC	1 cut(s)	1119
BcuI	ACTAGT	2 cut(s)	1298, 1442
BfaI	CTAG	8 cut(s)	285, 486, 978, 1011, 1299, 1443, 1653, 1722
BfmI	CTRYAG	2 cut(s)	438, 453
BfoI	RGCGCY	1 cut(s)	1759
BfrI	CTTAAG	2 cut(s)	176, 1607
BglII	AGATCT	1 cut(s)	561
BisI	GCNGC	4 cut(s)	900, 1025, 1209, 1754
BlsI	GCNGC	4 cut(s)	901, 1026, 1210, 1755
BmcAI	AGTACT	1 cut(s)	1447
Bme1390I	CCNGG	4 cut(s)	831, 1035, 1473, 1730
Bme18I	GGWCC	2 cut(s)	1110, 1503
BmgBI	CACGTC	1 cut(s)	32
BmgT120I	GGNCC	2 cut(s)	1110, 1503
BmiI	GGNNCC	3 cut(s)	414, 917, 1572
BmrFI	CCNGG	4 cut(s)	831, 1035, 1473, 1730
BmsI	GCATC	6 cut(s)	414, 871, 1231, 1428, 1501, 1768
BmtI	GCTAGC	1 cut(s)	1725
BpiI	GAAGAC	2 cut(s)	939, 1534
BsaJI	CCNNGG	5 cut(s)	408, 432, 868, 1481, 1729
BsaWI	WCCGGW	1 cut(s)	687
Bsc4I	CCNNNNNNNGG	1 cut(s)	687
Bse118I	RCCGGY	1 cut(s)	280
Bse1I	ACTGG	1 cut(s)	1453
BseBI	CCWGG	4 cut(s)	831, 1035, 1473, 1730
BseDI	CCNNGG	5 cut(s)	408, 432, 868, 1481, 1729
BseGI	GGATG	5 cut(s)	364, 429, 859, 1291, 1492
BseLI	CCNNNNNNNGG	1 cut(s)	687
BseMII	CTCAG	4 cut(s)	549, 1001, 1012, 1791
BseNI	ACTGG	1 cut(s)	1453
BseRI	GAGGAG	1 cut(s)	421
BseXI	GCAGC	4 cut(s)	911, 1011, 1195, 1765
BsgI	GTGCAG	1 cut(s)	1772
BshFI	GGCC	2 cut(s)	1651, 1693
BshNI	GGYRCC	1 cut(s)	915
BsiSI	CCGG	3 cut(s)	16, 281, 688
BslFI	GGGAC	2 cut(s)	654, 1054
BslI	CCNNNNNNNGG	1 cut(s)	687
BsmAI	GTCTC	1 cut(s)	1119
BsmFI	GGGAC	2 cut(s)	654, 1054
BsmI	GAATGC	1 cut(s)	739
BsnI	GGCC	2 cut(s)	1651, 1693
Bsp1407I	TGTACA	1 cut(s)	169
Bsp143I	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
Bsp19I	CCATGG	1 cut(s)	868
BspACI	CCGC	2 cut(s)	802, 1734
BspANI	GGCC	2 cut(s)	1651, 1693
BspCNI	CTCAG	4 cut(s)	550, 1000, 1011, 1792
BspHI	TCATGA	1 cut(s)	877
BspLI	GGNNCC	3 cut(s)	414, 917, 1572
BspOI	GCTAGC	1 cut(s)	1725
BspPI	GGATC	3 cut(s)	20, 348, 384
BspQI	GCTCTTC	2 cut(s)	465, 1530
BspT107I	GGYRCC	1 cut(s)	915
BspTI	CTTAAG	2 cut(s)	176, 1607
BsrFI	RCCGGY	1 cut(s)	280
BsrGI	TGTACA	1 cut(s)	169
BsrI	ACTGG	1 cut(s)	1453
BssAI	RCCGGY	1 cut(s)	280
BssECI	CCNNGG	5 cut(s)	408, 432, 868, 1481, 1729
BssMI	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
BssT1I	CCWWGG	2 cut(s)	868, 1481
Bst2UI	CCWGG	4 cut(s)	831, 1035, 1473, 1730
Bst4CI	ACNGT	3 cut(s)	652, 920, 934
Bst6I	CTCTTC	3 cut(s)	465, 1530, 1799
BstAFI	CTTAAG	2 cut(s)	176, 1607
BstAUI	TGTACA	1 cut(s)	169
BstC8I	GCNNGC	2 cut(s)	519, 1723
BstDEI	CTNAG	5 cut(s)	558, 614, 987, 998, 1800
BstDSI	CCRYGG	1 cut(s)	868
BstF5I	GGATG	5 cut(s)	364, 429, 859, 1291, 1492
BstH2I	RGCGCY	1 cut(s)	1759
BstHHI	GCGC	1 cut(s)	1758
BstKTI	GATC	7 cut(s)	28, 271, 343, 392, 564, 1318, 1397
BstMAI	GTCTC	1 cut(s)	1119
BstMBI	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
BstMWI	GCNNNNNNNGC	1 cut(s)	1731
BstNI	CCWGG	4 cut(s)	831, 1035, 1473, 1730
BstNSI	RCATGY	2 cut(s)	1031, 1785
BstSCI	CCNGG	4 cut(s)	829, 1033, 1471, 1728
BstSFI	CTRYAG	2 cut(s)	438, 453
BstV1I	GCAGC	4 cut(s)	911, 1011, 1195, 1765
BstV2I	GAAGAC	2 cut(s)	939, 1534
BstX2I	RGATCY	3 cut(s)	340, 389, 561
BstYI	RGATCY	3 cut(s)	340, 389, 561
BsuRI	GGCC	2 cut(s)	1651, 1693
BtgI	CCRYGG	1 cut(s)	868
BtgZI	GCGATG	1 cut(s)	1359
BtrI	CACGTC	1 cut(s)	32
BtsCI	GGATG	5 cut(s)	364, 429, 859, 1291, 1492
BtsI	GCAGTG	1 cut(s)	293
BtsIMutI	CAGTG	2 cut(s)	293, 1006
Cac8I	GCNNGC	2 cut(s)	519, 1723
CciI	TCATGA	1 cut(s)	877
CfoI	GCGC	1 cut(s)	1758
Cfr10I	RCCGGY	1 cut(s)	280
Cfr13I	GGNCC	2 cut(s)	1110, 1503
CsiI	ACCWGGT	1 cut(s)	1471
Csp6I	GTAC	5 cut(s)	170, 192, 633, 1407, 1446
CviAII	CATG	8 cut(s)	186, 514, 568, 869, 878, 1028, 1658, 1782
CviQI	GTAC	5 cut(s)	170, 192, 633, 1407, 1446
DdeI	CTNAG	5 cut(s)	558, 614, 987, 998, 1800
DpnI	GATC	7 cut(s)	27, 270, 342, 391, 563, 1317, 1396
DpnII	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
DraI	TTTAAA	1 cut(s)	1461
Eam1104I	CTCTTC	3 cut(s)	465, 1530, 1799
EarI	CTCTTC	3 cut(s)	465, 1530, 1799
Eco130I	CCWWGG	2 cut(s)	868, 1481
Eco147I	AGGCCT	1 cut(s)	1651
Eco47I	GGWCC	2 cut(s)	1110, 1503
Eco57I	CTGAAG	3 cut(s)	446, 962, 1511
EcoRI	GAATTC	2 cut(s)	476, 595
EcoRII	CCWGG	4 cut(s)	829, 1033, 1471, 1728
EcoT14I	CCWWGG	2 cut(s)	868, 1481
EcoT22I	ATGCAT	2 cut(s)	1494, 1783
ErhI	CCWWGG	2 cut(s)	868, 1481
FaeI	CATG	8 cut(s)	189, 517, 571, 872, 881, 1031, 1661, 1785
FaqI	GGGAC	2 cut(s)	654, 1054
FatI	CATG	8 cut(s)	185, 513, 567, 868, 877, 1027, 1657, 1781
FbaI	TGATCA	2 cut(s)	268, 1315
Fnu4HI	GCNGC	4 cut(s)	900, 1025, 1209, 1754
FokI	GGATG	5 cut(s)	371, 436, 866, 1298, 1479
Fsp4HI	GCNGC	4 cut(s)	900, 1025, 1209, 1754
FspBI	CTAG	8 cut(s)	285, 486, 978, 1011, 1299, 1443, 1653, 1722
GlaI	GCGC	1 cut(s)	1757
GluI	GCNGC	4 cut(s)	900, 1025, 1209, 1754
HaeII	RGCGCY	1 cut(s)	1759
HaeIII	GGCC	2 cut(s)	1651, 1693
HapII	CCGG	3 cut(s)	16, 281, 688
HhaI	GCGC	1 cut(s)	1758
Hin1II	CATG	8 cut(s)	189, 517, 571, 872, 881, 1031, 1661, 1785
Hin6I	GCGC	1 cut(s)	1756
HinP1I	GCGC	1 cut(s)	1756
HincII	GTYRAC	4 cut(s)	555, 579, 1167, 1797
HindII	GTYRAC	4 cut(s)	555, 579, 1167, 1797
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	1 cut(s)	1598
HpaII	CCGG	3 cut(s)	16, 281, 688
HphI	GGTGA	4 cut(s)	752, 819, 1325, 1787
Hpy166II	GTNNAC	6 cut(s)	555, 579, 1167, 1594, 1797, 1828
Hpy188III	TCNNGA	7 cut(s)	137, 375, 486, 878, 978, 1630, 1640
Hpy8I	GTNNAC	6 cut(s)	555, 579, 1167, 1594, 1797, 1828
Hpy99I	CGWCG	1 cut(s)	1470
HpyAV	CCTTC	3 cut(s)	504, 620, 1304
HpyCH4III	ACNGT	3 cut(s)	652, 920, 934
HpyCH4IV	ACGT	1 cut(s)	31
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1731
HpyF3I	CTNAG	5 cut(s)	558, 614, 987, 998, 1800
HpySE526I	ACGT	1 cut(s)	31
Hsp92II	CATG	8 cut(s)	189, 517, 571, 872, 881, 1031, 1661, 1785
HspAI	GCGC	1 cut(s)	1756
Ksp22I	TGATCA	2 cut(s)	268, 1315
Kzo9I	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
LguI	GCTCTTC	2 cut(s)	465, 1530
LmnI	GCTCC	1 cut(s)	1718
Lsp1109I	GCAGC	4 cut(s)	911, 1011, 1195, 1765
LweI	GCATC	6 cut(s)	414, 871, 1231, 1428, 1501, 1768
MabI	ACCWGGT	1 cut(s)	1471
MaeI	CTAG	8 cut(s)	285, 486, 978, 1011, 1299, 1443, 1653, 1722
MaeII	ACGT	1 cut(s)	31
MaeIII	GTNAC	2 cut(s)	211, 1701
MalI	GATC	7 cut(s)	27, 270, 342, 391, 563, 1317, 1396
MboI	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
MboII	GAAGA	8 cut(s)	139, 319, 452, 939, 1361, 1517, 1534, 1816
MflI	RGATCY	3 cut(s)	340, 389, 561
MmeI	TCCRAC	4 cut(s)	683, 1039, 1088, 1718
Mph1103I	ATGCAT	2 cut(s)	1494, 1783
MroXI	GAANNNNTTC	2 cut(s)	493, 1602
MseI	TTAA	7 cut(s)	66, 105, 177, 761, 792, 1460, 1608
MslI	CAYNNNNRTG	4 cut(s)	572, 999, 1323, 1344
MspA1I	CMGCKG	1 cut(s)	902
MspCI	CTTAAG	2 cut(s)	176, 1607
MspI	CCGG	3 cut(s)	16, 281, 688
MspR9I	CCNGG	4 cut(s)	831, 1035, 1473, 1730
Mva1269I	GAATGC	1 cut(s)	739
MvaI	CCWGG	4 cut(s)	831, 1035, 1473, 1730
MwoI	GCNNNNNNNGC	1 cut(s)	1731
NcoI	CCATGG	1 cut(s)	868
NdeII	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
NheI	GCTAGC	1 cut(s)	1721
NlaIII	CATG	8 cut(s)	189, 517, 571, 872, 881, 1031, 1661, 1785
NlaIV	GGNNCC	3 cut(s)	414, 917, 1572
NmeAIII	GCCGAG	2 cut(s)	413, 1045
NmuCI	GTSAC	1 cut(s)	211
NsiI	ATGCAT	2 cut(s)	1494, 1783
NspI	RCATGY	2 cut(s)	1031, 1785
PagI	TCATGA	1 cut(s)	877
PceI	AGGCCT	1 cut(s)	1651
PciSI	GCTCTTC	2 cut(s)	465, 1530
PcsI	WCGNNNNNNNCGW	1 cut(s)	1341
PctI	GAATGC	1 cut(s)	739
PdmI	GAANNNNTTC	2 cut(s)	493, 1602
PfeI	GAWTC	1 cut(s)	1598
PkrI	GCNGC	4 cut(s)	901, 1026, 1210, 1755
Psp6I	CCWGG	4 cut(s)	829, 1033, 1471, 1728
PspGI	CCWGG	4 cut(s)	829, 1033, 1471, 1728
PspN4I	GGNNCC	3 cut(s)	414, 917, 1572
PspPI	GGNCC	2 cut(s)	1110, 1503
PsuI	RGATCY	3 cut(s)	340, 389, 561
PvuII	CAGCTG	1 cut(s)	902
RsaI	GTAC	5 cut(s)	171, 193, 634, 1408, 1447
RsaNI	GTAC	5 cut(s)	170, 192, 633, 1407, 1446
RseI	CAYNNNNRTG	4 cut(s)	572, 999, 1323, 1344
SapI	GCTCTTC	2 cut(s)	465, 1530
SaqAI	TTAA	7 cut(s)	66, 105, 177, 761, 792, 1460, 1608
SatI	GCNGC	4 cut(s)	900, 1025, 1209, 1754
Sau3AI	GATC	7 cut(s)	25, 268, 340, 389, 561, 1315, 1394
Sau96I	GGNCC	2 cut(s)	1110, 1503
ScaI	AGTACT	1 cut(s)	1447
ScrFI	CCNGG	4 cut(s)	831, 1035, 1473, 1730
SexAI	ACCWGGT	1 cut(s)	1471
SfaNI	GCATC	6 cut(s)	414, 871, 1231, 1428, 1501, 1768
SfcI	CTRYAG	2 cut(s)	438, 453
SinI	GGWCC	2 cut(s)	1110, 1503
SmiMI	CAYNNNNRTG	4 cut(s)	572, 999, 1323, 1344
SmlI	CTYRAG	2 cut(s)	176, 1607
SmoI	CTYRAG	2 cut(s)	176, 1607
SpeI	ACTAGT	2 cut(s)	1298, 1442
SseBI	AGGCCT	1 cut(s)	1651
SsiI	CCGC	2 cut(s)	802, 1734
SspI	AATATT	2 cut(s)	796, 1361
SspMI	CTAG	8 cut(s)	285, 486, 978, 1011, 1299, 1443, 1653, 1722
StuI	AGGCCT	1 cut(s)	1651
StyD4I	CCNGG	4 cut(s)	829, 1033, 1471, 1728
StyI	CCWWGG	2 cut(s)	868, 1481
TaaI	ACNGT	3 cut(s)	652, 920, 934
TaiI	ACGT	1 cut(s)	34
TaqI	TCGA	2 cut(s)	1439, 1698
TatI	WGTACW	3 cut(s)	169, 632, 1445
TfiI	GAWTC	1 cut(s)	1598
Tru1I	TTAA	7 cut(s)	66, 105, 177, 761, 792, 1460, 1608
Tru9I	TTAA	7 cut(s)	66, 105, 177, 761, 792, 1460, 1608
TscAI	CASTG	2 cut(s)	300, 1006
TseFI	GTSAC	1 cut(s)	211
TseI	GCWGC	4 cut(s)	899, 1024, 1208, 1753
Tsp45I	GTSAC	1 cut(s)	211
TspRI	CASTG	2 cut(s)	300, 1006
Vha464I	CTTAAG	2 cut(s)	176, 1607
VpaK11BI	GGWCC	2 cut(s)	1110, 1503
XapI	RAATTY	7 cut(s)	53, 476, 595, 710, 1094, 1115, 1745
XbaI	TCTAGA	2 cut(s)	485, 977
XceI	RCATGY	2 cut(s)	1031, 1785
XmnI	GAANNNNTTC	2 cut(s)	493, 1602
XspI	CTAG	8 cut(s)	285, 486, 978, 1011, 1299, 1443, 1653, 1722
ZrmI	AGTACT	1 cut(s)	1447
Zsp2I	ATGCAT	2 cut(s)	1494, 1783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.