Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003807.1

Orthogroup ID

OG0008811

Physical Location & Seq

Genomic Coordinates Forward (+)

9400 .. 15287

Gene Structure 5888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003807.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

atggggacggggacggaaaatccccagtatcttattacggggattggggagggtatgaggatggagaatgaagtcggcagtagaaacatgaacgacggaggtaataaccaagcagacgcatctccggtgagaaagaccagaagaggacgcagaggaggaggaggaggacgggaacaacaccacccttctctccaaatcgacggtgcattaaaactcaacgatcttcagtcacctttgacttgtcagcctcagactcatgaacccaccacctcgacaccgagaaaccacagaaatccgaggtcggcatccgggaatagaggtgcccatgtattcaaacctcggtttgtcaagaaatctgagttgggttcttcttcgaatggcggagtgggctcttcttcgagtggagtagtagtgggttcttcttcgaagaatgaacaagtgggtgctttgaatgatgaggtggggtctctgagtattggtgagggagaaagtgggcagcaagcgaaacaagaagaagagagagttgtggctagtgtagagaatgctgctgaggtgtctgagcgtgggaaagtggaggatgatgctgtgacaagattggaagagctgcagcgcggtgtggaagagccggaattgtcagaagagcagctgaggatcaatgatcaggctcaggaggatgagttgcttgctatggagtccatttttggagacaacgttatcatccttgaaagacaacgaggccttcgatgttttcagattcatatacacattgaagctcctggtgaaattgctgttgctactaagttgaattcatctagtggcctaaagtccacaagtagtagttctgatgacttctcatactccttcacagtccagcatcttccaccaattatgttgacatgtgcgttacccaaatcatatccaagccaccaaccaccttatttcacactatctgttcaatggttggattctattaaaatttccaatttgtgttccatgctggactcattatggatggaccaacaaggacaggaggttatataccaatgggtggaatgggtacaaagttcttctctttctcatcttgggtttaataaggaaataatgcttggtccttatggtattagagatgctggagatagacgtgcactcacaggaagtgtatccccggatgcagatattccttttcttcgaagttacaataatgatagactccatgagaacttctgcaatagtttgcaggaatgctgcatctgttttactgagtatgcaggcgctgagtttgtcaggctgccttgcaagcatttcttctgttggaaatgcatgaagacttattctgacatgcatgtcaaggaaggtaccatcaccaaattgaactgtcctgatgcaaaatgtcagggtatgatcccaccaggtttgctaaaacaattgcttggcgatgaagagtttgaacgttgggagtccttgacgttagaaaaaacactcaattcaatgtctgatattgtgtcttgtccaagatgtaaaacaccctgcatagaagatgaagatgatcatgcccaatgctcaaagtgcttctttagcttctgtacactgtgctgggagcggcgtcatgtgggtgttcaatgtatgacaccagaaatgaagctccgtatcctccaggaacgtcaaaacttcagtcagttaggcgatgagcaaaagcggagagaaaaagaaatgatcaatgagatcctcagtgtgagagaaatacttagcgatgcaaagcaatgcccggcttgcaacatggcaatatcgcgagttgaaggttgcaacaagatggtgtgtgaaaattgtgggcagtacttctgctacaactgtggaagcggaataacgggatatgaacatttcagggatgggcaatgtgaactgttcccccaagaaacaattcggaactggcaggcacagatgaatcctcgccagaatttgggtcagatacacgctgaacaggtagctgaactggttgcccaacaggtagctgtacacggacaattatgtcccagttgtggtcagtttaatgcaaagtttaacaacaacaatcatatatcttgctgggcatgccaacaccacttttgctacttatgcaaagagaccgtgaggcgaagctctcagcattatggaccgaagggttgcaaacaacacacaccactatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006807 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0023051 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0033143 GO:0035257 GO:0035258 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0060765 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1990234 GO:2000058 GO:2000060 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RWD zf-C3HC4

Protein Analysis

727

Amino Acids

81.33

Weight (kDa)

5.75

Isoelectric Point (pI)

54.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32340
fragaria_vesca	FvH4_5g22580
malus_domestica	MD06G1037600.v1.1
prunus_persica	Prupe.5G031400_v2.0.a1
pyrus_communis	pycom06g03120 pycom06g03130
rosa_chinensis	RchiOBHm_Chr7g0210351
rosa_laevigata	RLG00000003044
rosa_multiflora	Rmu_sc0003807.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030310 Rroxscaffold_1G00030320 Rroxscaffold_1G00030790 Rroxscaffold_1G00030800 Rroxscaffold_1G00038480 Rroxscaffold_3G00248360 Rroxscaffold_5G00369280
rosa_rugosa	Rorug07G0121300
rosa_samantha	Rh2BG360900 Rh7AG254000 Rh7BG248900 Rh7CG270800 Rh7DG261500
rosa_wichuraiana	Rw7G021650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1343, 2025
Acc65I	GGTACC	1 cut(s)	1355
AccB1I	GGYRCC	2 cut(s)	320, 1355
AccB7I	CCANNNNNTGG	2 cut(s)	1048, 1957
AccBSI	CCGCTC	1 cut(s)	1600
AccII	CGCG	2 cut(s)	612, 1789
AciI	CCGC	5 cut(s)	381, 612, 1600, 1696, 1857
AclI	AACGTT	2 cut(s)	711, 1450
AclWI	GGATC	3 cut(s)	659, 1396, 1717
AcsI	RAATTY	3 cut(s)	805, 975, 1954
AcuI	CTGAAG	2 cut(s)	209, 1654
AcyI	GRCGYC	1 cut(s)	1603
AfaI	GTAC	5 cut(s)	1059, 1357, 1585, 1835, 2013
AfiI	CCNNNNNNNGG	3 cut(s)	1048, 1957, 2036
AflIII	ACRYGT	1 cut(s)	896
AjiI	CACGTC	1 cut(s)	1142
AjnI	CCWGG	3 cut(s)	775, 1408, 1653
AjuI	GAANNNNNNNTTGG	6 cut(s)	344, 376, 1089, 1121, 1902, 1934
AluBI	AGCT	8 cut(s)	604, 646, 773, 1578, 1642, 1985, 2009, 2136
AluI	AGCT	8 cut(s)	604, 646, 773, 1578, 1642, 1985, 2009, 2136
Alw21I	GWGCWC	1 cut(s)	1147
Alw26I	GTCTC	3 cut(s)	471, 699, 2114
Alw44I	GTGCAC	1 cut(s)	1143
AlwI	GGATC	3 cut(s)	659, 1396, 1717
AlwNI	CAGNNNCTG	1 cut(s)	1274
AoxI	GGCC	2 cut(s)	736, 817
ApaLI	GTGCAC	1 cut(s)	1143
ApeKI	GCWGC	7 cut(s)	496, 545, 604, 607, 643, 1245, 1288
ApoI	RAATTY	3 cut(s)	805, 975, 1954
ArsI	GACNNNNNNTTYG	2 cut(s)	1657, 1689
Asp700I	GAANNNNTTC	1 cut(s)	1917
Asp718I	GGTACC	1 cut(s)	1355
AspLEI	GCGC	2 cut(s)	612, 1274
AspS9I	GGNCC	3 cut(s)	1015, 1109, 2150
AsuC2I	CCSGG	3 cut(s)	310, 1166, 1766
AsuHPI	GGTGA	5 cut(s)	139, 222, 491, 791, 1354
AsuII	TTCGAA	3 cut(s)	374, 425, 1189
AvaII	GGWCC	3 cut(s)	1015, 1109, 2150
BaeGI	GKGCMC	2 cut(s)	325, 1147
BanI	GGYRCC	2 cut(s)	320, 1355
BanII	GRGCYC	1 cut(s)	392
BbsI	GAAGAC	1 cut(s)	1331
Bbv12I	GWGCWC	1 cut(s)	1147
BbvCI	CCTCAGC	2 cut(s)	549, 647
BbvI	GCAGC	7 cut(s)	508, 532, 591, 619, 655, 1232, 1275
BccI	CCATC	5 cut(s)	55, 1006, 1367, 1804, 1880
BciT130I	CCWGG	3 cut(s)	777, 1410, 1655
BciVI	GTATCC	2 cut(s)	1171, 1658
BclI	TGATCA	3 cut(s)	658, 1546, 1713
BcnI	CCSGG	3 cut(s)	310, 1166, 1766
BcoDI	GTCTC	3 cut(s)	471, 699, 2114
BfaI	CTAG	2 cut(s)	531, 813
BfmI	CTRYAG	2 cut(s)	605, 2180
BfoI	RGCGCY	1 cut(s)	1275
BfuI	GTATCC	2 cut(s)	1171, 1658
BisI	GCNGC	8 cut(s)	497, 546, 605, 608, 644, 1246, 1289, 1601
BlsI	GCNGC	8 cut(s)	498, 547, 606, 609, 645, 1247, 1290, 1602
BmcAI	AGTACT	1 cut(s)	1835
Bme1390I	CCNGG	6 cut(s)	310, 777, 1166, 1410, 1655, 1766
Bme18I	GGWCC	3 cut(s)	1015, 1109, 2150
BmgBI	CACGTC	1 cut(s)	1142
BmgT120I	GGNCC	3 cut(s)	1015, 1109, 2150
BmiI	GGNNCC	2 cut(s)	322, 1357
BmrFI	CCNGG	6 cut(s)	310, 777, 1166, 1410, 1655, 1766
BmrI	ACTGGG	2 cut(s)	19, 2025
BmsI	GCATC	9 cut(s)	128, 314, 571, 883, 1117, 1159, 1257, 1372, 1741
BmuI	ACTGGG	2 cut(s)	19, 2025
BpiI	GAAGAC	1 cut(s)	1331
BpmI	CTGGAG	2 cut(s)	1152, 1637
Bpu10I	CCTNAGC	3 cut(s)	549, 647, 666
Bpu14I	TTCGAA	3 cut(s)	374, 425, 1189
BpuMI	CCSGG	3 cut(s)	310, 1166, 1766
BsaHI	GRCGYC	1 cut(s)	1603
BsaI	GGTCTC	2 cut(s)	471, 2114
BsaJI	CCNNGG	3 cut(s)	296, 338, 1164
BsaWI	WCCGGW	1 cut(s)	124
BsaXI	ACNNNNNCTCC	6 cut(s)	396, 426, 662, 692, 696, 726
Bsc4I	CCNNNNNNNGG	3 cut(s)	1048, 1957, 2036
Bse1I	ACTGG	4 cut(s)	25, 1931, 1995, 2031
Bse3DI	GCAATG	2 cut(s)	1766, 1898
BseBI	CCWGG	3 cut(s)	777, 1410, 1655
BseDI	CCNNGG	3 cut(s)	296, 338, 1164
BseGI	GGATG	8 cut(s)	66, 305, 583, 679, 717, 1017, 1174, 1891
BseLI	CCNNNNNNNGG	3 cut(s)	1048, 1957, 2036
BseMI	GCAATG	2 cut(s)	1766, 1898
BseNI	ACTGG	4 cut(s)	25, 1931, 1995, 2031
BseRI	GAGGAG	4 cut(s)	168, 171, 174, 177
BseSI	GKGCMC	2 cut(s)	325, 1147
BseXI	GCAGC	7 cut(s)	508, 532, 591, 619, 655, 1232, 1275
BseYI	CCCAGC	2 cut(s)	1593, 2082
Bsh1236I	CGCG	2 cut(s)	612, 1789
BshFI	GGCC	2 cut(s)	738, 819
BshNI	GGYRCC	2 cut(s)	320, 1355
BsiHKAI	GWGCWC	1 cut(s)	1147
BsiSI	CCGG	5 cut(s)	125, 309, 626, 1166, 1766
BslFI	GGGAC	3 cut(s)	19, 25, 2013
BslI	CCNNNNNNNGG	3 cut(s)	1048, 1957, 2036
BsmAI	GTCTC	3 cut(s)	471, 699, 2114
BsmFI	GGGAC	3 cut(s)	19, 25, 2013
BsmI	GAATGC	2 cut(s)	547, 1247
BsnI	GGCC	2 cut(s)	738, 819
Bso31I	GGTCTC	2 cut(s)	471, 2114
Bsp119I	TTCGAA	3 cut(s)	374, 425, 1189
Bsp1286I	GDGCHC	3 cut(s)	325, 392, 1147
Bsp1407I	TGTACA	2 cut(s)	1583, 2011
Bsp143I	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
Bsp68I	TCGCGA	1 cut(s)	1789
BspACI	CCGC	5 cut(s)	381, 612, 1600, 1696, 1857
BspANI	GGCC	2 cut(s)	738, 819
BspFNI	CGCG	2 cut(s)	612, 1789
BspHI	TCATGA	1 cut(s)	256
BspLI	GGNNCC	2 cut(s)	322, 1357
BspMAI	CTGCAG	1 cut(s)	609
BspPI	GGATC	3 cut(s)	659, 1396, 1717
BspQI	GCTCTTC	4 cut(s)	397, 594, 615, 633
BspT104I	TTCGAA	3 cut(s)	374, 425, 1189
BspT107I	GGYRCC	2 cut(s)	320, 1355
BspTNI	GGTCTC	2 cut(s)	471, 2114
BsrBI	CCGCTC	1 cut(s)	1600
BsrDI	GCAATG	2 cut(s)	1766, 1898
BsrGI	TGTACA	2 cut(s)	1583, 2011
BsrI	ACTGG	4 cut(s)	25, 1931, 1995, 2031
BssECI	CCNNGG	3 cut(s)	296, 338, 1164
BssMI	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
BssNI	GRCGYC	1 cut(s)	1603
Bst2UI	CCWGG	3 cut(s)	777, 1410, 1655
Bst4CI	ACNGT	7 cut(s)	203, 868, 1376, 1590, 1850, 1902, 2125
Bst6I	CTCTTC	7 cut(s)	136, 397, 510, 594, 615, 633, 1434
BstACI	GRCGYC	1 cut(s)	1603
BstAUI	TGTACA	2 cut(s)	1583, 2011
BstBI	TTCGAA	3 cut(s)	374, 425, 1189
BstC8I	GCNNGC	7 cut(s)	501, 684, 1270, 1298, 1771, 1932, 2089
BstF5I	GGATG	8 cut(s)	66, 305, 583, 679, 717, 1017, 1174, 1891
BstFNI	CGCG	2 cut(s)	612, 1789
BstH2I	RGCGCY	1 cut(s)	1275
BstHHI	GCGC	2 cut(s)	612, 1274
BstKTI	GATC	7 cut(s)	223, 654, 661, 1404, 1549, 1716, 1725
BstMAI	GTCTC	3 cut(s)	471, 699, 2114
BstMBI	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
BstMWI	GCNNNNNNNGC	7 cut(s)	387, 1297, 1566, 1575, 1770, 2088, 2112
BstNI	CCWGG	3 cut(s)	777, 1410, 1655
BstNSI	RCATGY	4 cut(s)	900, 1342, 1346, 2091
BstSCI	CCNGG	6 cut(s)	308, 775, 1164, 1408, 1653, 1764
BstSFI	CTRYAG	2 cut(s)	605, 2180
BstSLI	GKGCMC	2 cut(s)	325, 1147
BstUI	CGCG	2 cut(s)	612, 1789
BstV1I	GCAGC	7 cut(s)	508, 532, 591, 619, 655, 1232, 1275
BstV2I	GAAGAC	1 cut(s)	1331
BstX2I	RGATCY	1 cut(s)	1722
BstYI	RGATCY	1 cut(s)	1722
BsuI	GTATCC	2 cut(s)	1171, 1658
BsuRI	GGCC	2 cut(s)	738, 819
BtgZI	GCGATG	3 cut(s)	1449, 1698, 1764
BtrI	CACGTC	1 cut(s)	1142
BtsCI	GGATG	8 cut(s)	66, 305, 583, 679, 717, 1017, 1174, 1891
BtsIMutI	CAGTG	2 cut(s)	1586, 1735
BtuMI	TCGCGA	1 cut(s)	1789
Cac8I	GCNNGC	7 cut(s)	501, 684, 1270, 1298, 1771, 1932, 2089
CaiI	CAGNNNCTG	1 cut(s)	1274
CciI	TCATGA	1 cut(s)	256
CfoI	GCGC	2 cut(s)	612, 1274
Cfr13I	GGNCC	3 cut(s)	1015, 1109, 2150
CseI	GACGC	3 cut(s)	125, 156, 1592
CsiI	ACCWGGT	1 cut(s)	1408
Csp6I	GTAC	5 cut(s)	1058, 1356, 1584, 1834, 2012
CspCI	CAANNNNNGTGG	2 cut(s)	1395, 1430
CviQI	GTAC	5 cut(s)	1058, 1356, 1584, 1834, 2012
DpnI	GATC	7 cut(s)	222, 653, 660, 1403, 1548, 1715, 1724
DpnII	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
DrdI	GACNNNNNNGTC	2 cut(s)	1343, 2025
DseDI	GACNNNNNNGTC	2 cut(s)	1343, 2025
Eam1104I	CTCTTC	7 cut(s)	136, 397, 510, 594, 615, 633, 1434
EarI	CTCTTC	7 cut(s)	136, 397, 510, 594, 615, 633, 1434
EciI	GGCGGA	1 cut(s)	396
Eco147I	AGGCCT	1 cut(s)	738
Eco24I	GRGCYC	1 cut(s)	392
Eco31I	GGTCTC	2 cut(s)	471, 2114
Eco47I	GGWCC	3 cut(s)	1015, 1109, 2150
Eco57I	CTGAAG	2 cut(s)	209, 1654
EcoRI	GAATTC	1 cut(s)	805
EcoRII	CCWGG	3 cut(s)	775, 1408, 1653
EcoT22I	ATGCAT	2 cut(s)	1322, 1344
EcoT38I	GRGCYC	1 cut(s)	392
FalI	AAGNNNNNCTT	4 cut(s)	1289, 1321, 1556, 1588
FaqI	GGGAC	3 cut(s)	19, 25, 2013
FbaI	TGATCA	3 cut(s)	658, 1546, 1713
Fnu4HI	GCNGC	8 cut(s)	497, 546, 605, 608, 644, 1246, 1289, 1601
FokI	GGATG	8 cut(s)	73, 292, 590, 686, 704, 1024, 1181, 1898
FriOI	GRGCYC	1 cut(s)	392
Fsp4HI	GCNGC	8 cut(s)	497, 546, 605, 608, 644, 1246, 1289, 1601
FspBI	CTAG	2 cut(s)	531, 813
GlaI	GCGC	2 cut(s)	611, 1273
GluI	GCNGC	8 cut(s)	497, 546, 605, 608, 644, 1246, 1289, 1601
GsaI	CCCAGC	2 cut(s)	1597, 2086
GsuI	CTGGAG	2 cut(s)	1152, 1637
HaeII	RGCGCY	1 cut(s)	1275
HaeIII	GGCC	2 cut(s)	738, 819
HapII	CCGG	5 cut(s)	125, 309, 626, 1166, 1766
HgaI	GACGC	3 cut(s)	125, 156, 1592
HhaI	GCGC	2 cut(s)	612, 1274
Hin1I	GRCGYC	1 cut(s)	1603
Hin6I	GCGC	2 cut(s)	610, 1272
HinP1I	GCGC	2 cut(s)	610, 1272
HincII	GTYRAC	1 cut(s)	894
HindII	GTYRAC	1 cut(s)	894
HinfI	GANTC	8 cut(s)	253, 692, 754, 965, 1001, 1209, 1457, 1942
HpaII	CCGG	5 cut(s)	125, 309, 626, 1166, 1766
HphI	GGTGA	5 cut(s)	139, 222, 491, 791, 1354
Hpy166II	GTNNAC	6 cut(s)	828, 894, 1145, 1586, 1898, 2014
Hpy188III	TCNNGA	5 cut(s)	257, 349, 668, 1379, 1788
Hpy8I	GTNNAC	6 cut(s)	828, 894, 1145, 1586, 1898, 2014
Hpy99I	CGWCG	2 cut(s)	98, 203
HpyAV	CCTTC	6 cut(s)	195, 749, 871, 1346, 1790, 2149
HpyCH4III	ACNGT	7 cut(s)	203, 868, 1376, 1590, 1850, 1902, 2125
HpyCH4IV	ACGT	5 cut(s)	711, 1141, 1450, 1466, 1660
HpyF10VI	GCNNNNNNNGC	7 cut(s)	387, 1297, 1566, 1575, 1770, 2088, 2112
HpySE526I	ACGT	5 cut(s)	711, 1141, 1450, 1466, 1660
Hsp92I	GRCGYC	1 cut(s)	1603
HspAI	GCGC	2 cut(s)	610, 1272
KpnI	GGTACC	1 cut(s)	1359
Ksp22I	TGATCA	3 cut(s)	658, 1546, 1713
Kzo9I	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
LguI	GCTCTTC	4 cut(s)	397, 594, 615, 633
LmnI	GCTCC	3 cut(s)	778, 1597, 1647
Lsp1109I	GCAGC	7 cut(s)	508, 532, 591, 619, 655, 1232, 1275
LweI	GCATC	9 cut(s)	128, 314, 571, 883, 1117, 1159, 1257, 1372, 1741
MabI	ACCWGGT	1 cut(s)	1408
MaeI	CTAG	2 cut(s)	531, 813
MaeII	ACGT	5 cut(s)	711, 1141, 1450, 1466, 1660
MaeIII	GTNAC	4 cut(s)	228, 586, 903, 1193
MalI	GATC	7 cut(s)	222, 653, 660, 1403, 1548, 1715, 1724
MbiI	CCGCTC	1 cut(s)	1600
MboI	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
MfeI	CAATTG	1 cut(s)	1424
MflI	RGATCY	1 cut(s)	1722
MhlI	GDGCHC	3 cut(s)	325, 392, 1147
MlyI	GAGTC	5 cut(s)	247, 701, 995, 1203, 1466
MmeI	TCCRAC	2 cut(s)	942, 1292
Mph1103I	ATGCAT	2 cut(s)	1322, 1344
MroXI	GAANNNNTTC	1 cut(s)	1917
MseI	TTAA	5 cut(s)	209, 972, 1089, 2046, 2058
MslI	CAYNNNNRTG	1 cut(s)	1611
MspA1I	CMGCKG	1 cut(s)	646
MspI	CCGG	5 cut(s)	125, 309, 626, 1166, 1766
MspR9I	CCNGG	6 cut(s)	310, 777, 1166, 1410, 1655, 1766
MunI	CAATTG	1 cut(s)	1424
Mva1269I	GAATGC	2 cut(s)	547, 1247
MvaI	CCWGG	3 cut(s)	777, 1410, 1655
MvnI	CGCG	2 cut(s)	612, 1789
MwoI	GCNNNNNNNGC	7 cut(s)	387, 1297, 1566, 1575, 1770, 2088, 2112
NciI	CCSGG	3 cut(s)	310, 1166, 1766
NdeII	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
NlaIV	GGNNCC	2 cut(s)	322, 1357
NmuCI	GTSAC	2 cut(s)	228, 586
NruI	TCGCGA	1 cut(s)	1789
NsiI	ATGCAT	2 cut(s)	1322, 1344
NspI	RCATGY	4 cut(s)	900, 1342, 1346, 2091
NspV	TTCGAA	3 cut(s)	374, 425, 1189
PaeI	GCATGC	1 cut(s)	2091
PagI	TCATGA	1 cut(s)	256
PceI	AGGCCT	1 cut(s)	738
PciI	ACATGT	1 cut(s)	896
PciSI	GCTCTTC	4 cut(s)	397, 594, 615, 633
PcsI	WCGNNNNNNNCGW	1 cut(s)	739
PctI	GAATGC	2 cut(s)	547, 1247
PdmI	GAANNNNTTC	1 cut(s)	1917
PfeI	GAWTC	3 cut(s)	754, 965, 1942
PflMI	CCANNNNNTGG	2 cut(s)	1048, 1957
PfoI	TCCNGGA	2 cut(s)	308, 1653
PkrI	GCNGC	8 cut(s)	498, 547, 606, 609, 645, 1247, 1290, 1602
PleI	GAGTC	5 cut(s)	247, 700, 995, 1203, 1465
PpsI	GAGTC	5 cut(s)	247, 700, 995, 1203, 1465
PscI	ACATGT	1 cut(s)	896
Psp1406I	AACGTT	2 cut(s)	711, 1450
Psp6I	CCWGG	3 cut(s)	775, 1408, 1653
PspFI	CCCAGC	2 cut(s)	1593, 2082
PspGI	CCWGG	3 cut(s)	775, 1408, 1653
PspN4I	GGNNCC	2 cut(s)	322, 1357
PspPI	GGNCC	3 cut(s)	1015, 1109, 2150
PstI	CTGCAG	1 cut(s)	609
PstNI	CAGNNNCTG	1 cut(s)	1274
PsuI	RGATCY	1 cut(s)	1722
PvuII	CAGCTG	1 cut(s)	646
RruI	TCGCGA	1 cut(s)	1789
RsaI	GTAC	5 cut(s)	1059, 1357, 1585, 1835, 2013
RsaNI	GTAC	5 cut(s)	1058, 1356, 1584, 1834, 2012
RseI	CAYNNNNRTG	1 cut(s)	1611
SapI	GCTCTTC	4 cut(s)	397, 594, 615, 633
SaqAI	TTAA	5 cut(s)	209, 972, 1089, 2046, 2058
SatI	GCNGC	8 cut(s)	497, 546, 605, 608, 644, 1246, 1289, 1601
Sau3AI	GATC	7 cut(s)	220, 651, 658, 1401, 1546, 1713, 1722
Sau96I	GGNCC	3 cut(s)	1015, 1109, 2150
ScaI	AGTACT	1 cut(s)	1835
SchI	GAGTC	5 cut(s)	247, 701, 995, 1203, 1466
ScrFI	CCNGG	6 cut(s)	310, 777, 1166, 1410, 1655, 1766
SduI	GDGCHC	3 cut(s)	325, 392, 1147
SexAI	ACCWGGT	1 cut(s)	1408
SfaNI	GCATC	9 cut(s)	128, 314, 571, 883, 1117, 1159, 1257, 1372, 1741
SfcI	CTRYAG	2 cut(s)	605, 2180
SfuI	TTCGAA	3 cut(s)	374, 425, 1189
SinI	GGWCC	3 cut(s)	1015, 1109, 2150
SmiMI	CAYNNNNRTG	1 cut(s)	1611
SphI	GCATGC	1 cut(s)	2091
SseBI	AGGCCT	1 cut(s)	738
SsiI	CCGC	5 cut(s)	381, 612, 1600, 1696, 1857
SspMI	CTAG	2 cut(s)	531, 813
StuI	AGGCCT	1 cut(s)	738
StyD4I	CCNGG	6 cut(s)	308, 775, 1164, 1408, 1653, 1764
TaaI	ACNGT	7 cut(s)	203, 868, 1376, 1590, 1850, 1902, 2125
TaiI	ACGT	5 cut(s)	714, 1144, 1453, 1469, 1663
TaqI	TCGA	7 cut(s)	198, 272, 374, 398, 425, 742, 1189
TaqII	GACCGA	1 cut(s)	2167
TatI	WGTACW	3 cut(s)	1583, 1833, 2011
TauI	GCSGC	1 cut(s)	1603
TfiI	GAWTC	3 cut(s)	754, 965, 1942
Tru1I	TTAA	5 cut(s)	209, 972, 1089, 2046, 2058
Tru9I	TTAA	5 cut(s)	209, 972, 1089, 2046, 2058
TscAI	CASTG	2 cut(s)	1593, 1735
TseFI	GTSAC	2 cut(s)	228, 586
TseI	GCWGC	7 cut(s)	496, 545, 604, 607, 643, 1245, 1288
Tsp45I	GTSAC	2 cut(s)	228, 586
TspGWI	ACGGA	4 cut(s)	29, 111, 1634, 2031
TspRI	CASTG	2 cut(s)	1593, 1735
Van91I	CCANNNNNTGG	2 cut(s)	1048, 1957
VneI	GTGCAC	1 cut(s)	1143
VpaK11BI	GGWCC	3 cut(s)	1015, 1109, 2150
XapI	RAATTY	3 cut(s)	805, 975, 1954
XceI	RCATGY	4 cut(s)	900, 1342, 1346, 2091
XmnI	GAANNNNTTC	1 cut(s)	1917
XspI	CTAG	2 cut(s)	531, 813
ZrmI	AGTACT	1 cut(s)	1835
Zsp2I	ATGCAT	2 cut(s)	1322, 1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.