Rw7G021650

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0008811
Physical Location & Seq
Forward (+)
25174529 .. 25180464
5936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G021650.1

Sequence Viewer

Length: 1602 bp
ATGAACGACGGAGGTAATAACCAAGCGGACGGATCTCCGGTGAGAAAGACCAGAAGAGGACGCAGAGGAGGAAGACGGGAACAACACCACCCTTCTCTCCAAATCGACGATGCATTAAAACTCAACGATCTTCAGTCACCTTTGACTTGTCAACCTCAGACTCATGAACCCACCACCTCGACACCGAGAAACCACAGAAATCCGAGGTCGGCATCCGGGAATAGAGGTGCCCATGTATTCAAACCTCGGTTTGTCAAGAAATCTGAGTTGGGTTCTTCTTCGAATGGCGGAGTGGGTTCTTCTTCGAATGGAGTAGTAGTGGGTTCTTCTTCGAAGAATGAACAAGTGGGTGCTTTGAATGATGAGGTGGGGTCTCTGAGTATTGGTGAGGGAGAAAAAGGGCGGCAAGCGAAACAAGAAGAAGAGAGAGTTGCGGCTAGTGTAGAGAATGCTGCTGAGGTGTCTGAGCGTGGGAAAGTGGAGGATGATGCTGTGACAAGATTGGAAGAGCTGCAGCGCGGTGTCGAAGAGCCGGAGTTGTCAGAAGAGCAGCTGAGGATCAATGATCAGGCTCAGGAGGATGAGTTGCTTGCTATGGAGTCCATTTTTGGAGACAACGTTATCATCCTTGAAAGACAACGAGGCCTTCGATGTTTTCAGATTCATATACACATTGAAGCTCCTGGTGAAATTGCTGTTTCTACTAAGTTGAATTCATCTAGTGGCCTAAAGTCCACAAGTAGTAGTTCTGATGACTTCTCATACTCCTTCACAGTCCAGCATCTTCCACCAATTATGTTGACATGTGCGTTACCCAAATCATATCCAAGCCACCAACCACCTTATTTCACACTATCTGTTCAATGGTTGGATTCTATTAAAATTTCCAATTTGTGTTCCATGCTGGACTCATTATGGATGGACCAACAAGGACAGGAGGTTATATACCAATGGGTGGAATGGGTACAAAGTTCTTCTCTTTCTCATCTTGGGTTTAATAAGGAAATAATGCTTGGTCCGTATGGTATTAGAGATGCTGGAGATAGACGTGCACTCACAGGAAGTGTATCCCCGGATGCAGATATTCCTTTTCTTCGAAGTTACAATAATGATAGACTCCATGAGAACTTCTGCAATAGTTTGCAGGAATGCTGCATCTGTTTTACTGAGTATGCAGGCGCTGAGTTTGTCAGGCTGCCTTGCAAGCATTTCTTCTGTTGGAAATGCATGAAGACTTATTCTGACATGCATGTCAAGGAAGGTACCATCACCAAATTGAACTGTCCTGATGCAAAATGTCAGGGTATGATCCCACCAGGTTTGCTAAAACAATTGCTTGGCGATGAAGAGTTTGAACGTTGGGAGTCCTTGACGTTAGAAAAAACACTCAATTCAATGTCTGATATTGTGTCTTGTCCAAGATGTAAAACACCCTGCATAGAAGATGAAGATGATCATGCCCAATGCTCAAAGTGCTTCTTTAGCTTCTGTACACTGTGCTGGGAGCGGCGTCATGTGGGTGTTCAATGTATGACACCAGAAATGAAGCTCCGTATCCTCCAGGTGAAGTTATTCTTTTCACTTCAAATCATTTCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006807 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0023051 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0033143 GO:0035257 GO:0035258 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0060765 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1990234 GO:2000058 GO:2000060 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR RWD zf-C3HC4

Protein Analysis

533

Amino Acids

59.64

Weight (kDa)

5.61

Isoelectric Point (pI)

55.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RWD PF05773 190 - 324 3.5e-24 RWD domain
zf-RING_2 PF13639 382 - 419 4.2e-06 Ring finger domain
IBR PF01485 452 - 510 2.6e-08 IBR domain, a half RING-finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1250
Acc65I GGTACC 1 cut(s) 1262
AccB1I GGYRCC 2 cut(s) 227, 1262
AccB7I CCANNNNNTGG 1 cut(s) 955
AccBSI CCGCTC 1 cut(s) 1507
AccII CGCG 1 cut(s) 519
AciI CCGC 6 cut(s) 26, 288, 403, 434, 519, 1507
AclI AACGTT 2 cut(s) 618, 1357
AclWI GGATC 3 cut(s) 40, 566, 1303
AcsI RAATTY 2 cut(s) 712, 882
AcuI CTGAAG 1 cut(s) 116
AcyI GRCGYC 1 cut(s) 1510
AfaI GTAC 3 cut(s) 966, 1264, 1492
AfiI CCNNNNNNNGG 1 cut(s) 955
AflIII ACRYGT 1 cut(s) 803
AjiI CACGTC 1 cut(s) 1049
AjnI CCWGG 3 cut(s) 682, 1315, 1560
AjuI GAANNNNNNNTTGG 4 cut(s) 251, 283, 996, 1028
AluBI AGCT 5 cut(s) 511, 553, 680, 1485, 1549
AluI AGCT 5 cut(s) 511, 553, 680, 1485, 1549
Alw21I GWGCWC 1 cut(s) 1054
Alw26I GTCTC 2 cut(s) 378, 606
Alw44I GTGCAC 1 cut(s) 1050
AlwI GGATC 3 cut(s) 40, 566, 1303
AlwNI CAGNNNCTG 1 cut(s) 1181
AoxI GGCC 2 cut(s) 643, 724
ApaLI GTGCAC 1 cut(s) 1050
ApeKI GCWGC 6 cut(s) 452, 511, 514, 550, 1152, 1195
ApoI RAATTY 2 cut(s) 712, 882
Asp700I GAANNNNTTC 1 cut(s) 1571
Asp718I GGTACC 1 cut(s) 1262
AspLEI GCGC 2 cut(s) 519, 1181
AspS9I GGNCC 2 cut(s) 922, 1016
AsuC2I CCSGG 2 cut(s) 217, 1073
AsuHPI GGTGA 6 cut(s) 52, 129, 398, 698, 1261, 1576
AsuII TTCGAA 4 cut(s) 281, 305, 332, 1096
AvaII GGWCC 2 cut(s) 922, 1016
BaeGI GKGCMC 2 cut(s) 232, 1054
BanI GGYRCC 2 cut(s) 227, 1262
BbsI GAAGAC 2 cut(s) 79, 1238
Bbv12I GWGCWC 1 cut(s) 1054
BbvCI CCTCAGC 2 cut(s) 456, 554
BbvI GCAGC 6 cut(s) 439, 498, 526, 562, 1139, 1182
BccI CCATC 2 cut(s) 913, 1274
BciT130I CCWGG 3 cut(s) 684, 1317, 1562
BciVI GTATCC 2 cut(s) 1078, 1565
BclI TGATCA 2 cut(s) 565, 1453
BcnI CCSGG 2 cut(s) 217, 1073
BcoDI GTCTC 2 cut(s) 378, 606
BfaI CTAG 2 cut(s) 438, 720
BfmI CTRYAG 1 cut(s) 512
BfoI RGCGCY 1 cut(s) 1182
BfuI GTATCC 2 cut(s) 1078, 1565
BisI GCNGC 9 cut(s) 404, 435, 453, 512, 515, 551, 1153, 1196, 1508
BlsI GCNGC 9 cut(s) 405, 436, 454, 513, 516, 552, 1154, 1197, 1509
Bme1390I CCNGG 5 cut(s) 217, 684, 1073, 1317, 1562
Bme18I GGWCC 2 cut(s) 922, 1016
BmgBI CACGTC 1 cut(s) 1049
BmgT120I GGNCC 2 cut(s) 922, 1016
BmiI GGNNCC 2 cut(s) 229, 1264
BmrFI CCNGG 5 cut(s) 217, 684, 1073, 1317, 1562
BmsI GCATC 8 cut(s) 100, 221, 478, 790, 1024, 1066, 1164, 1279
BpiI GAAGAC 2 cut(s) 79, 1238
BpmI CTGGAG 2 cut(s) 1059, 1544
Bpu10I CCTNAGC 3 cut(s) 456, 554, 573
Bpu14I TTCGAA 4 cut(s) 281, 305, 332, 1096
BpuMI CCSGG 2 cut(s) 217, 1073
BsaHI GRCGYC 1 cut(s) 1510
BsaI GGTCTC 1 cut(s) 378
BsaJI CCNNGG 3 cut(s) 203, 245, 1071
BsaWI WCCGGW 1 cut(s) 37
BsaXI ACNNNNNCTCC 6 cut(s) 303, 333, 569, 599, 603, 633
Bsc4I CCNNNNNNNGG 1 cut(s) 955
BseBI CCWGG 3 cut(s) 684, 1317, 1562
BseDI CCNNGG 3 cut(s) 203, 245, 1071
BseGI GGATG 6 cut(s) 212, 490, 586, 624, 924, 1081
BseLI CCNNNNNNNGG 1 cut(s) 955
BseMII CTCAG 9 cut(s) 170, 255, 368, 447, 456, 545, 587, 1158, 1173
BseRI GAGGAG 1 cut(s) 81
BseSI GKGCMC 2 cut(s) 232, 1054
BseXI GCAGC 6 cut(s) 439, 498, 526, 562, 1139, 1182
BseYI CCCAGC 1 cut(s) 1500
Bsh1236I CGCG 1 cut(s) 519
BshFI GGCC 2 cut(s) 645, 726
BshNI GGYRCC 2 cut(s) 227, 1262
BsiHKAI GWGCWC 1 cut(s) 1054
BsiSI CCGG 4 cut(s) 38, 216, 533, 1073
BslI CCNNNNNNNGG 1 cut(s) 955
BsmAI GTCTC 2 cut(s) 378, 606
BsmI GAATGC 2 cut(s) 454, 1154
BsnI GGCC 2 cut(s) 645, 726
Bso31I GGTCTC 1 cut(s) 378
Bsp119I TTCGAA 4 cut(s) 281, 305, 332, 1096
Bsp1286I GDGCHC 2 cut(s) 232, 1054
Bsp1407I TGTACA 1 cut(s) 1490
Bsp143I GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
BspACI CCGC 6 cut(s) 26, 288, 403, 434, 519, 1507
BspANI GGCC 2 cut(s) 645, 726
BspCNI CTCAG 9 cut(s) 169, 256, 369, 448, 457, 546, 586, 1159, 1174
BspFNI CGCG 1 cut(s) 519
BspHI TCATGA 1 cut(s) 163
BspLI GGNNCC 2 cut(s) 229, 1264
BspMAI CTGCAG 1 cut(s) 516
BspPI GGATC 3 cut(s) 40, 566, 1303
BspQI GCTCTTC 3 cut(s) 501, 522, 540
BspT104I TTCGAA 4 cut(s) 281, 305, 332, 1096
BspT107I GGYRCC 2 cut(s) 227, 1262
BspTNI GGTCTC 1 cut(s) 378
BsrBI CCGCTC 1 cut(s) 1507
BsrGI TGTACA 1 cut(s) 1490
BssECI CCNNGG 3 cut(s) 203, 245, 1071
BssMI GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
BssNI GRCGYC 1 cut(s) 1510
Bst2UI CCWGG 3 cut(s) 684, 1317, 1562
Bst4CI ACNGT 3 cut(s) 775, 1283, 1497
Bst6I CTCTTC 6 cut(s) 49, 417, 501, 522, 540, 1341
BstACI GRCGYC 1 cut(s) 1510
BstAUI TGTACA 1 cut(s) 1490
BstBI TTCGAA 4 cut(s) 281, 305, 332, 1096
BstC8I GCNNGC 4 cut(s) 408, 591, 1177, 1205
BstF5I GGATG 6 cut(s) 212, 490, 586, 624, 924, 1081
BstFNI CGCG 1 cut(s) 519
BstH2I RGCGCY 1 cut(s) 1182
BstHHI GCGC 2 cut(s) 519, 1181
BstKTI GATC 6 cut(s) 35, 130, 561, 568, 1311, 1456
BstMAI GTCTC 2 cut(s) 378, 606
BstMBI GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
BstMWI GCNNNNNNNGC 3 cut(s) 1204, 1473, 1482
BstNI CCWGG 3 cut(s) 684, 1317, 1562
BstNSI RCATGY 3 cut(s) 807, 1249, 1253
BstSCI CCNGG 5 cut(s) 215, 682, 1071, 1315, 1560
BstSFI CTRYAG 1 cut(s) 512
BstSLI GKGCMC 2 cut(s) 232, 1054
BstUI CGCG 1 cut(s) 519
BstV1I GCAGC 6 cut(s) 439, 498, 526, 562, 1139, 1182
BstV2I GAAGAC 2 cut(s) 79, 1238
BstX2I RGATCY 1 cut(s) 32
BstYI RGATCY 1 cut(s) 32
BsuI GTATCC 2 cut(s) 1078, 1565
BsuRI GGCC 2 cut(s) 645, 726
BtgZI GCGATG 1 cut(s) 1356
BtrI CACGTC 1 cut(s) 1049
BtsCI GGATG 6 cut(s) 212, 490, 586, 624, 924, 1081
BtsIMutI CAGTG 1 cut(s) 1493
Cac8I GCNNGC 4 cut(s) 408, 591, 1177, 1205
CaiI CAGNNNCTG 1 cut(s) 1181
CciI TCATGA 1 cut(s) 163
CfoI GCGC 2 cut(s) 519, 1181
Cfr13I GGNCC 2 cut(s) 922, 1016
CseI GACGC 2 cut(s) 69, 1499
CsiI ACCWGGT 1 cut(s) 1315
Csp6I GTAC 3 cut(s) 965, 1263, 1491
CspCI CAANNNNNGTGG 2 cut(s) 1302, 1337
CviQI GTAC 3 cut(s) 965, 1263, 1491
DpnI GATC 6 cut(s) 34, 129, 560, 567, 1310, 1455
DpnII GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
DrdI GACNNNNNNGTC 1 cut(s) 1250
DseDI GACNNNNNNGTC 1 cut(s) 1250
Eam1104I CTCTTC 6 cut(s) 49, 417, 501, 522, 540, 1341
EarI CTCTTC 6 cut(s) 49, 417, 501, 522, 540, 1341
EciI GGCGGA 1 cut(s) 303
Eco147I AGGCCT 1 cut(s) 645
Eco31I GGTCTC 1 cut(s) 378
Eco47I GGWCC 2 cut(s) 922, 1016
Eco57I CTGAAG 1 cut(s) 116
EcoRI GAATTC 1 cut(s) 712
EcoRII CCWGG 3 cut(s) 682, 1315, 1560
EcoT22I ATGCAT 3 cut(s) 115, 1229, 1251
FalI AAGNNNNNCTT 6 cut(s) 1196, 1228, 1463, 1495, 1559, 1591
FbaI TGATCA 2 cut(s) 565, 1453
Fnu4HI GCNGC 9 cut(s) 404, 435, 453, 512, 515, 551, 1153, 1196, 1508
FokI GGATG 6 cut(s) 199, 497, 593, 611, 931, 1088
Fsp4HI GCNGC 9 cut(s) 404, 435, 453, 512, 515, 551, 1153, 1196, 1508
FspBI CTAG 2 cut(s) 438, 720
GlaI GCGC 2 cut(s) 518, 1180
GluI GCNGC 9 cut(s) 404, 435, 453, 512, 515, 551, 1153, 1196, 1508
GsaI CCCAGC 1 cut(s) 1504
GsuI CTGGAG 2 cut(s) 1059, 1544
HaeII RGCGCY 1 cut(s) 1182
HaeIII GGCC 2 cut(s) 645, 726
HapII CCGG 4 cut(s) 38, 216, 533, 1073
HgaI GACGC 2 cut(s) 69, 1499
HhaI GCGC 2 cut(s) 519, 1181
Hin1I GRCGYC 1 cut(s) 1510
Hin6I GCGC 2 cut(s) 517, 1179
HinP1I GCGC 2 cut(s) 517, 1179
HincII GTYRAC 2 cut(s) 152, 801
HindII GTYRAC 2 cut(s) 152, 801
HinfI GANTC 7 cut(s) 160, 599, 661, 872, 908, 1116, 1364
HpaII CCGG 4 cut(s) 38, 216, 533, 1073
HphI GGTGA 6 cut(s) 52, 129, 398, 698, 1261, 1576
Hpy166II GTNNAC 5 cut(s) 152, 735, 801, 1052, 1493
Hpy188III TCNNGA 4 cut(s) 164, 256, 575, 1286
Hpy8I GTNNAC 5 cut(s) 152, 735, 801, 1052, 1493
Hpy99I CGWCG 2 cut(s) 11, 110
HpyAV CCTTC 4 cut(s) 102, 656, 778, 1253
HpyCH4III ACNGT 3 cut(s) 775, 1283, 1497
HpyCH4IV ACGT 4 cut(s) 618, 1048, 1357, 1373
HpyF10VI GCNNNNNNNGC 3 cut(s) 1204, 1473, 1482
HpySE526I ACGT 4 cut(s) 618, 1048, 1357, 1373
Hsp92I GRCGYC 1 cut(s) 1510
HspAI GCGC 2 cut(s) 517, 1179
KpnI GGTACC 1 cut(s) 1266
Ksp22I TGATCA 2 cut(s) 565, 1453
Kzo9I GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
LguI GCTCTTC 3 cut(s) 501, 522, 540
LmnI GCTCC 3 cut(s) 685, 1504, 1554
Lsp1109I GCAGC 6 cut(s) 439, 498, 526, 562, 1139, 1182
LweI GCATC 8 cut(s) 100, 221, 478, 790, 1024, 1066, 1164, 1279
MabI ACCWGGT 1 cut(s) 1315
MaeI CTAG 2 cut(s) 438, 720
MaeII ACGT 4 cut(s) 618, 1048, 1357, 1373
MaeIII GTNAC 4 cut(s) 135, 493, 810, 1100
MalI GATC 6 cut(s) 34, 129, 560, 567, 1310, 1455
MbiI CCGCTC 1 cut(s) 1507
MboI GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
MfeI CAATTG 1 cut(s) 1331
MflI RGATCY 1 cut(s) 32
MhlI GDGCHC 2 cut(s) 232, 1054
MluCI AATT 8 cut(s) 690, 712, 792, 882, 889, 1274, 1331, 1390
MlyI GAGTC 5 cut(s) 154, 608, 902, 1110, 1373
MmeI TCCRAC 2 cut(s) 849, 1199
Mph1103I ATGCAT 3 cut(s) 115, 1229, 1251
MroXI GAANNNNTTC 1 cut(s) 1571
MseI TTAA 4 cut(s) 116, 879, 996, 1600
MslI CAYNNNNRTG 1 cut(s) 1518
MspA1I CMGCKG 1 cut(s) 553
MspI CCGG 4 cut(s) 38, 216, 533, 1073
MspR9I CCNGG 5 cut(s) 217, 684, 1073, 1317, 1562
MunI CAATTG 1 cut(s) 1331
Mva1269I GAATGC 2 cut(s) 454, 1154
MvaI CCWGG 3 cut(s) 684, 1317, 1562
MvnI CGCG 1 cut(s) 519
MwoI GCNNNNNNNGC 3 cut(s) 1204, 1473, 1482
NciI CCSGG 2 cut(s) 217, 1073
NdeII GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
NlaIV GGNNCC 2 cut(s) 229, 1264
NmuCI GTSAC 2 cut(s) 135, 493
NsiI ATGCAT 3 cut(s) 115, 1229, 1251
NspI RCATGY 3 cut(s) 807, 1249, 1253
NspV TTCGAA 4 cut(s) 281, 305, 332, 1096
PagI TCATGA 1 cut(s) 163
PceI AGGCCT 1 cut(s) 645
PciI ACATGT 1 cut(s) 803
PciSI GCTCTTC 3 cut(s) 501, 522, 540
PcsI WCGNNNNNNNCGW 1 cut(s) 646
PctI GAATGC 2 cut(s) 454, 1154
PdmI GAANNNNTTC 1 cut(s) 1571
PfeI GAWTC 2 cut(s) 661, 872
PflMI CCANNNNNTGG 1 cut(s) 955
PfoI TCCNGGA 1 cut(s) 215
PkrI GCNGC 9 cut(s) 405, 436, 454, 513, 516, 552, 1154, 1197, 1509
PleI GAGTC 5 cut(s) 154, 607, 902, 1110, 1372
PpsI GAGTC 5 cut(s) 154, 607, 902, 1110, 1372
PscI ACATGT 1 cut(s) 803
Psp1406I AACGTT 2 cut(s) 618, 1357
Psp6I CCWGG 3 cut(s) 682, 1315, 1560
PspFI CCCAGC 1 cut(s) 1500
PspGI CCWGG 3 cut(s) 682, 1315, 1560
PspN4I GGNNCC 2 cut(s) 229, 1264
PspPI GGNCC 2 cut(s) 922, 1016
PstI CTGCAG 1 cut(s) 516
PstNI CAGNNNCTG 1 cut(s) 1181
PsuI RGATCY 1 cut(s) 32
PvuII CAGCTG 1 cut(s) 553
RsaI GTAC 3 cut(s) 966, 1264, 1492
RsaNI GTAC 3 cut(s) 965, 1263, 1491
RseI CAYNNNNRTG 1 cut(s) 1518
SapI GCTCTTC 3 cut(s) 501, 522, 540
SaqAI TTAA 4 cut(s) 116, 879, 996, 1600
SatI GCNGC 9 cut(s) 404, 435, 453, 512, 515, 551, 1153, 1196, 1508
Sau3AI GATC 6 cut(s) 32, 127, 558, 565, 1308, 1453
Sau96I GGNCC 2 cut(s) 922, 1016
SchI GAGTC 5 cut(s) 154, 608, 902, 1110, 1373
ScrFI CCNGG 5 cut(s) 217, 684, 1073, 1317, 1562
SduI GDGCHC 2 cut(s) 232, 1054
SexAI ACCWGGT 1 cut(s) 1315
SfaNI GCATC 8 cut(s) 100, 221, 478, 790, 1024, 1066, 1164, 1279
SfcI CTRYAG 1 cut(s) 512
SfuI TTCGAA 4 cut(s) 281, 305, 332, 1096
SinI GGWCC 2 cut(s) 922, 1016
SmiMI CAYNNNNRTG 1 cut(s) 1518
Sse9I AATT 8 cut(s) 690, 712, 792, 882, 889, 1274, 1331, 1390
SseBI AGGCCT 1 cut(s) 645
SsiI CCGC 6 cut(s) 26, 288, 403, 434, 519, 1507
SspMI CTAG 2 cut(s) 438, 720
StuI AGGCCT 1 cut(s) 645
StyD4I CCNGG 5 cut(s) 215, 682, 1071, 1315, 1560
TaaI ACNGT 3 cut(s) 775, 1283, 1497
TaiI ACGT 4 cut(s) 621, 1051, 1360, 1376
TaqI TCGA 8 cut(s) 105, 179, 281, 305, 332, 525, 649, 1096
TasI AATT 8 cut(s) 690, 712, 792, 882, 889, 1274, 1331, 1390
TatI WGTACW 1 cut(s) 1490
TauI GCSGC 3 cut(s) 406, 437, 1510
TfiI GAWTC 2 cut(s) 661, 872
Tru1I TTAA 4 cut(s) 116, 879, 996, 1600
Tru9I TTAA 4 cut(s) 116, 879, 996, 1600
TscAI CASTG 1 cut(s) 1500
TseFI GTSAC 2 cut(s) 135, 493
TseI GCWGC 6 cut(s) 452, 511, 514, 550, 1152, 1195
Tsp45I GTSAC 2 cut(s) 135, 493
TspGWI ACGGA 4 cut(s) 24, 45, 1008, 1541
TspRI CASTG 1 cut(s) 1500
Van91I CCANNNNNTGG 1 cut(s) 955
VneI GTGCAC 1 cut(s) 1050
VpaK11BI GGWCC 2 cut(s) 922, 1016
XapI RAATTY 2 cut(s) 712, 882
XceI RCATGY 3 cut(s) 807, 1249, 1253
XmnI GAANNNNTTC 1 cut(s) 1571
XspI CTAG 2 cut(s) 438, 720
Zsp2I ATGCAT 3 cut(s) 115, 1229, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.