Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0008811

Physical Location & Seq

Genomic Coordinates Forward (+)

26765243 .. 26771659

Gene Structure 6417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG270800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGAACGACGGAGGTAATAACCAAGCGGACGGATCTCCGGTGAGAAAGACCAGAAGAGGACGCAGAGGAGGAGGAGGACGGGAACAACACCACCCTTCTCTCCAAATCGACGATGCATTAAAACTCAACGATCTTCAGTCACCTTTGACTTGTCAGCCTCAGACTCATGAACCCACCACCTCGACACCCAGAAACCACAGAAATCCGAGGTCGGCATCCAGGAATCGAGGTGCCCTTGTATTCAAACCTCGGTTTGTCGAGAAATCTGAGTTGGGTTCTTCTTCGAATGGCGGAGTGGGTTCTTCTTCGAAGAATGGACAAGTGGGTTCTTTGAATGATGAGGTGGGGTCTCTGAGTATTATTGGTGAGGGAGAAAGTGGGCAGCAAGCGAAGCAAGAAGAAGAGAGAGTTGGGGCTAGTGTAGAGAATGCTGCTGAGGTGTCTGAGCGTGGGAAAGAGGAGGAGGATGATGCTGTGACAAGATTGGAAGAGCTGCAGCGCGGTGTCGAAGAGCCGGAGTTGTCAGAAGAGCAGCTGAGGATCAATGATCAGGCTCAGGAGGATGAGTTGCTTGCTATGGAGTCCATTTTTGGAGACAACGTTATCATCCTTGAAAGACAACGAGGCCTTCGATGTTTTCAGATTCATATACACATTGAAGCTCCTGGTGAAATTGCTGTTTCTACTAAGTTGAATTCATCTAGTGACCTTAAGTCCACAAGTAGTAGTTCTGATGACTTCTCATACTCCTTCACAGTCCAGCATCTTCCACCAATTATGTTGACATGTGCGTTACCCAAATCATATCCAAGCCACCAGCCACCTTATTTCACACTATCTGTTCAATGGTTGGATTCTATTAAAATTTCCAATTTGTGTTCCATGCTGGACTCATTATGGATGGACCAACAAGGACAGGAGGTTATATACCAATGGGTGGAATGGCTACAAAGTTCTTCTCTTTCTCATCTTGGGTTTAATGAGGAAATAATGCTTTGTCCTTATGGTAGTAGAGATGCTGGAGATAGACGTGCACTCACAGGAAGTGTATCCCCGGATGCAGATATTCCTTTTCTTCGAAGTTACAATAATGATAGACTCCATGAGAACTTCCGCAATAGTTTGCAGGAATGCTGCATCTGTTTTACTGAGTATGCAGGCGCTGAGTTTGTCAGGCTGCCTTGCAAGCATTTCTTCTGCTGGAAATGCATGAAGACTTATTCTGACATGCATGTCAAGGAAGGTACCATCACCAAATTGAACTGTCCTGATACAAAATGTCAGGGTATGATCCCACCAGGTTTGCTAAAACGATTGCTTGGCGATGAAGAGTTTGAACGTTGGGAGTCCTTGATGTTAGAAAAAACACTCGATTCAATGTCTGATGTTGTGTCTTGTCCAAGATGTAAAACACCCTGCATAGAAGATGAAGATGATCATGCCCAATGCTCAAAGTGCTTCTTTAGCTTCTGTACACTGTGCTGGGAGCGGCGTCATGTGGGTGTTCAATGTATGACACCAGAAATGAAGCTCCGTATCCTCCAGGTGAAGTTATTCTTTTCACTTCAAATCATTTCATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006807 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0023051 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0033143 GO:0035257 GO:0035258 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0060765 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1990234 GO:2000058 GO:2000060 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR RWD zf-C3HC4

Protein Analysis

527

Amino Acids

59.24

Weight (kDa)

5.2

Isoelectric Point (pI)

59.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RWD	PF05773	184 - 318	2.6e-24	RWD domain
zf-RING_2	PF13639	376 - 413	4.2e-06	Ring finger domain
IBR	PF01485	446 - 504	1.2e-08	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32340
fragaria_vesca	FvH4_5g22580
malus_domestica	MD06G1037600.v1.1
prunus_persica	Prupe.5G031400_v2.0.a1
pyrus_communis	pycom06g03120 pycom06g03130
rosa_chinensis	RchiOBHm_Chr7g0210351
rosa_laevigata	RLG00000003044
rosa_multiflora	Rmu_sc0003807.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030310 Rroxscaffold_1G00030320 Rroxscaffold_1G00030790 Rroxscaffold_1G00030800 Rroxscaffold_1G00038480 Rroxscaffold_3G00248360 Rroxscaffold_5G00369280
rosa_rugosa	Rorug07G0121300
rosa_samantha	Rh2BG360900 Rh7AG254000 Rh7BG248900 Rh7CG270800 Rh7DG261500
rosa_wichuraiana	Rw7G021650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1232
Acc65I	GGTACC	1 cut(s)	1244
AccB1I	GGYRCC	2 cut(s)	230, 1244
AccB7I	CCANNNNNTGG	1 cut(s)	937
AccBSI	CCGCTC	1 cut(s)	1489
AccII	CGCG	1 cut(s)	501
AciI	CCGC	5 cut(s)	26, 291, 501, 1114, 1489
AclI	AACGTT	2 cut(s)	600, 1339
AclWI	GGATC	3 cut(s)	40, 548, 1285
AcsI	RAATTY	2 cut(s)	694, 864
AcuI	CTGAAG	1 cut(s)	119
AcyI	GRCGYC	1 cut(s)	1492
AfaI	GTAC	2 cut(s)	1246, 1474
AfiI	CCNNNNNNNGG	1 cut(s)	937
AflII	CTTAAG	1 cut(s)	710
AflIII	ACRYGT	1 cut(s)	785
AhdI	GACNNNNNGTC	1 cut(s)	712
AjiI	CACGTC	1 cut(s)	1031
AjnI	CCWGG	4 cut(s)	218, 664, 1297, 1542
AjuI	GAANNNNNNNTTGG	4 cut(s)	254, 286, 393, 425
AluBI	AGCT	5 cut(s)	493, 535, 662, 1467, 1531
AluI	AGCT	5 cut(s)	493, 535, 662, 1467, 1531
Alw21I	GWGCWC	1 cut(s)	1036
Alw26I	GTCTC	2 cut(s)	354, 588
Alw44I	GTGCAC	1 cut(s)	1032
AlwI	GGATC	3 cut(s)	40, 548, 1285
AlwNI	CAGNNNCTG	1 cut(s)	1163
AoxI	GGCC	1 cut(s)	625
ApaLI	GTGCAC	1 cut(s)	1032
ApeKI	GCWGC	7 cut(s)	382, 431, 493, 496, 532, 1134, 1177
ApoI	RAATTY	2 cut(s)	694, 864
Asp700I	GAANNNNTTC	1 cut(s)	1553
Asp718I	GGTACC	1 cut(s)	1244
AspLEI	GCGC	2 cut(s)	501, 1163
AspS9I	GGNCC	1 cut(s)	904
AsuC2I	CCSGG	1 cut(s)	1055
AsuHPI	GGTGA	6 cut(s)	52, 132, 377, 680, 1243, 1558
AsuII	TTCGAA	3 cut(s)	284, 308, 1078
AvaII	GGWCC	1 cut(s)	904
BaeGI	GKGCMC	2 cut(s)	235, 1036
BanI	GGYRCC	2 cut(s)	230, 1244
BbsI	GAAGAC	1 cut(s)	1220
Bbv12I	GWGCWC	1 cut(s)	1036
BbvCI	CCTCAGC	2 cut(s)	435, 536
BbvI	GCAGC	7 cut(s)	394, 418, 480, 508, 544, 1121, 1164
BccI	CCATC	2 cut(s)	895, 1256
BciT130I	CCWGG	4 cut(s)	220, 666, 1299, 1544
BciVI	GTATCC	2 cut(s)	1060, 1547
BclI	TGATCA	2 cut(s)	547, 1435
BcnI	CCSGG	1 cut(s)	1055
BcoDI	GTCTC	2 cut(s)	354, 588
BfaI	CTAG	2 cut(s)	417, 702
BfmI	CTRYAG	1 cut(s)	494
BfoI	RGCGCY	1 cut(s)	1164
BfrI	CTTAAG	1 cut(s)	710
BfuI	GTATCC	2 cut(s)	1060, 1547
BisI	GCNGC	8 cut(s)	383, 432, 494, 497, 533, 1135, 1178, 1490
BlsI	GCNGC	8 cut(s)	384, 433, 495, 498, 534, 1136, 1179, 1491
Bme1390I	CCNGG	5 cut(s)	220, 666, 1055, 1299, 1544
Bme18I	GGWCC	1 cut(s)	904
BmeRI	GACNNNNNGTC	1 cut(s)	712
BmgBI	CACGTC	1 cut(s)	1031
BmgT120I	GGNCC	1 cut(s)	904
BmiI	GGNNCC	2 cut(s)	232, 1246
BmrFI	CCNGG	5 cut(s)	220, 666, 1055, 1299, 1544
BmsI	GCATC	7 cut(s)	103, 224, 460, 772, 1006, 1048, 1146
BpiI	GAAGAC	1 cut(s)	1220
BpmI	CTGGAG	2 cut(s)	1041, 1526
Bpu10I	CCTNAGC	3 cut(s)	435, 536, 555
Bpu14I	TTCGAA	3 cut(s)	284, 308, 1078
BpuMI	CCSGG	1 cut(s)	1055
BsaHI	GRCGYC	1 cut(s)	1492
BsaI	GGTCTC	1 cut(s)	354
BsaJI	CCNNGG	3 cut(s)	206, 248, 1053
BsaWI	WCCGGW	1 cut(s)	37
BsaXI	ACNNNNNCTCC	4 cut(s)	551, 581, 585, 615
Bsc4I	CCNNNNNNNGG	1 cut(s)	937
BseBI	CCWGG	4 cut(s)	220, 666, 1299, 1544
BseDI	CCNNGG	3 cut(s)	206, 248, 1053
BseGI	GGATG	6 cut(s)	215, 472, 568, 606, 906, 1063
BseLI	CCNNNNNNNGG	1 cut(s)	937
BseMII	CTCAG	9 cut(s)	173, 258, 344, 426, 435, 527, 569, 1140, 1155
BseRI	GAGGAG	5 cut(s)	81, 84, 87, 473, 476
BseSI	GKGCMC	2 cut(s)	235, 1036
BseXI	GCAGC	7 cut(s)	394, 418, 480, 508, 544, 1121, 1164
BseYI	CCCAGC	1 cut(s)	1482
Bsh1236I	CGCG	1 cut(s)	501
BshFI	GGCC	1 cut(s)	627
BshNI	GGYRCC	2 cut(s)	230, 1244
BsiHKAI	GWGCWC	1 cut(s)	1036
BsiSI	CCGG	3 cut(s)	38, 515, 1055
BslI	CCNNNNNNNGG	1 cut(s)	937
BsmAI	GTCTC	2 cut(s)	354, 588
BsmI	GAATGC	2 cut(s)	433, 1136
BsnI	GGCC	1 cut(s)	627
Bso31I	GGTCTC	1 cut(s)	354
Bsp119I	TTCGAA	3 cut(s)	284, 308, 1078
Bsp1286I	GDGCHC	2 cut(s)	235, 1036
Bsp1407I	TGTACA	1 cut(s)	1472
Bsp143I	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
BspACI	CCGC	5 cut(s)	26, 291, 501, 1114, 1489
BspANI	GGCC	1 cut(s)	627
BspCNI	CTCAG	9 cut(s)	172, 259, 345, 427, 436, 528, 568, 1141, 1156
BspFNI	CGCG	1 cut(s)	501
BspHI	TCATGA	1 cut(s)	166
BspLI	GGNNCC	2 cut(s)	232, 1246
BspMAI	CTGCAG	1 cut(s)	498
BspPI	GGATC	3 cut(s)	40, 548, 1285
BspQI	GCTCTTC	3 cut(s)	483, 504, 522
BspT104I	TTCGAA	3 cut(s)	284, 308, 1078
BspT107I	GGYRCC	2 cut(s)	230, 1244
BspTI	CTTAAG	1 cut(s)	710
BspTNI	GGTCTC	1 cut(s)	354
BsrBI	CCGCTC	1 cut(s)	1489
BsrGI	TGTACA	1 cut(s)	1472
BssECI	CCNNGG	3 cut(s)	206, 248, 1053
BssMI	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
BssNI	GRCGYC	1 cut(s)	1492
Bst2UI	CCWGG	4 cut(s)	220, 666, 1299, 1544
Bst4CI	ACNGT	3 cut(s)	757, 1265, 1479
Bst6I	CTCTTC	6 cut(s)	49, 396, 483, 504, 522, 1323
BstACI	GRCGYC	1 cut(s)	1492
BstAFI	CTTAAG	1 cut(s)	710
BstAUI	TGTACA	1 cut(s)	1472
BstBI	TTCGAA	3 cut(s)	284, 308, 1078
BstC8I	GCNNGC	4 cut(s)	387, 573, 1159, 1187
BstF5I	GGATG	6 cut(s)	215, 472, 568, 606, 906, 1063
BstFNI	CGCG	1 cut(s)	501
BstH2I	RGCGCY	1 cut(s)	1164
BstHHI	GCGC	2 cut(s)	501, 1163
BstKTI	GATC	6 cut(s)	35, 133, 543, 550, 1293, 1438
BstMAI	GTCTC	2 cut(s)	354, 588
BstMBI	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
BstMWI	GCNNNNNNNGC	5 cut(s)	391, 1186, 1206, 1455, 1464
BstNI	CCWGG	4 cut(s)	220, 666, 1299, 1544
BstNSI	RCATGY	3 cut(s)	789, 1231, 1235
BstSCI	CCNGG	5 cut(s)	218, 664, 1053, 1297, 1542
BstSFI	CTRYAG	1 cut(s)	494
BstSLI	GKGCMC	2 cut(s)	235, 1036
BstUI	CGCG	1 cut(s)	501
BstV1I	GCAGC	7 cut(s)	394, 418, 480, 508, 544, 1121, 1164
BstV2I	GAAGAC	1 cut(s)	1220
BstX2I	RGATCY	1 cut(s)	32
BstYI	RGATCY	1 cut(s)	32
BsuI	GTATCC	2 cut(s)	1060, 1547
BsuRI	GGCC	1 cut(s)	627
BtgZI	GCGATG	1 cut(s)	1338
BtrI	CACGTC	1 cut(s)	1031
BtsCI	GGATG	6 cut(s)	215, 472, 568, 606, 906, 1063
BtsIMutI	CAGTG	1 cut(s)	1475
Cac8I	GCNNGC	4 cut(s)	387, 573, 1159, 1187
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	1 cut(s)	166
CfoI	GCGC	2 cut(s)	501, 1163
Cfr13I	GGNCC	1 cut(s)	904
CseI	GACGC	2 cut(s)	69, 1481
CsiI	ACCWGGT	1 cut(s)	1297
Csp6I	GTAC	2 cut(s)	1245, 1473
CspCI	CAANNNNNGTGG	2 cut(s)	1284, 1319
CviAII	CATG	9 cut(s)	167, 786, 883, 1103, 1210, 1228, 1232, 1439, 1496
CviQI	GTAC	2 cut(s)	1245, 1473
DpnI	GATC	6 cut(s)	34, 132, 542, 549, 1292, 1437
DpnII	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
DrdI	GACNNNNNNGTC	1 cut(s)	1232
DriI	GACNNNNNGTC	1 cut(s)	712
DseDI	GACNNNNNNGTC	1 cut(s)	1232
Eam1104I	CTCTTC	6 cut(s)	49, 396, 483, 504, 522, 1323
Eam1105I	GACNNNNNGTC	1 cut(s)	712
EarI	CTCTTC	6 cut(s)	49, 396, 483, 504, 522, 1323
EciI	GGCGGA	1 cut(s)	306
Eco147I	AGGCCT	1 cut(s)	627
Eco31I	GGTCTC	1 cut(s)	354
Eco47I	GGWCC	1 cut(s)	904
Eco57I	CTGAAG	1 cut(s)	119
EcoRI	GAATTC	1 cut(s)	694
EcoRII	CCWGG	4 cut(s)	218, 664, 1297, 1542
EcoT22I	ATGCAT	3 cut(s)	118, 1211, 1233
FaeI	CATG	9 cut(s)	170, 789, 886, 1106, 1213, 1231, 1235, 1442, 1499
FalI	AAGNNNNNCTT	6 cut(s)	1178, 1210, 1445, 1477, 1541, 1573
FatI	CATG	9 cut(s)	166, 785, 882, 1102, 1209, 1227, 1231, 1438, 1495
FbaI	TGATCA	2 cut(s)	547, 1435
Fnu4HI	GCNGC	8 cut(s)	383, 432, 494, 497, 533, 1135, 1178, 1490
FokI	GGATG	6 cut(s)	202, 479, 575, 593, 913, 1070
Fsp4HI	GCNGC	8 cut(s)	383, 432, 494, 497, 533, 1135, 1178, 1490
FspBI	CTAG	2 cut(s)	417, 702
GlaI	GCGC	2 cut(s)	500, 1162
GluI	GCNGC	8 cut(s)	383, 432, 494, 497, 533, 1135, 1178, 1490
GsaI	CCCAGC	1 cut(s)	1486
GsuI	CTGGAG	2 cut(s)	1041, 1526
HaeII	RGCGCY	1 cut(s)	1164
HaeIII	GGCC	1 cut(s)	627
HapII	CCGG	3 cut(s)	38, 515, 1055
HgaI	GACGC	2 cut(s)	69, 1481
HhaI	GCGC	2 cut(s)	501, 1163
Hin1I	GRCGYC	1 cut(s)	1492
Hin1II	CATG	9 cut(s)	170, 789, 886, 1106, 1213, 1231, 1235, 1442, 1499
Hin6I	GCGC	2 cut(s)	499, 1161
HinP1I	GCGC	2 cut(s)	499, 1161
HincII	GTYRAC	1 cut(s)	783
HindII	GTYRAC	1 cut(s)	783
HinfI	GANTC	9 cut(s)	163, 223, 581, 643, 854, 890, 1098, 1346, 1373
HpaII	CCGG	3 cut(s)	38, 515, 1055
HphI	GGTGA	6 cut(s)	52, 132, 377, 680, 1243, 1558
Hpy166II	GTNNAC	4 cut(s)	717, 783, 1034, 1475
Hpy188III	TCNNGA	4 cut(s)	167, 259, 557, 1268
Hpy8I	GTNNAC	4 cut(s)	717, 783, 1034, 1475
Hpy99I	CGWCG	2 cut(s)	11, 113
HpyAV	CCTTC	4 cut(s)	105, 638, 760, 1235
HpyCH4III	ACNGT	3 cut(s)	757, 1265, 1479
HpyCH4IV	ACGT	3 cut(s)	600, 1030, 1339
HpyF10VI	GCNNNNNNNGC	5 cut(s)	391, 1186, 1206, 1455, 1464
HpySE526I	ACGT	3 cut(s)	600, 1030, 1339
Hsp92I	GRCGYC	1 cut(s)	1492
Hsp92II	CATG	9 cut(s)	170, 789, 886, 1106, 1213, 1231, 1235, 1442, 1499
HspAI	GCGC	2 cut(s)	499, 1161
KpnI	GGTACC	1 cut(s)	1248
Ksp22I	TGATCA	2 cut(s)	547, 1435
Kzo9I	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
LguI	GCTCTTC	3 cut(s)	483, 504, 522
LmnI	GCTCC	3 cut(s)	667, 1486, 1536
Lsp1109I	GCAGC	7 cut(s)	394, 418, 480, 508, 544, 1121, 1164
LweI	GCATC	7 cut(s)	103, 224, 460, 772, 1006, 1048, 1146
MabI	ACCWGGT	1 cut(s)	1297
MaeI	CTAG	2 cut(s)	417, 702
MaeII	ACGT	3 cut(s)	600, 1030, 1339
MaeIII	GTNAC	5 cut(s)	138, 475, 704, 792, 1082
MalI	GATC	6 cut(s)	34, 132, 542, 549, 1292, 1437
MbiI	CCGCTC	1 cut(s)	1489
MboI	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
MflI	RGATCY	1 cut(s)	32
MhlI	GDGCHC	2 cut(s)	235, 1036
MluCI	AATT	6 cut(s)	672, 694, 774, 864, 871, 1256
MlyI	GAGTC	5 cut(s)	157, 590, 884, 1092, 1355
MmeI	TCCRAC	1 cut(s)	831
Mph1103I	ATGCAT	3 cut(s)	118, 1211, 1233
MroXI	GAANNNNTTC	1 cut(s)	1553
MseI	TTAA	5 cut(s)	119, 711, 861, 978, 1582
MslI	CAYNNNNRTG	1 cut(s)	1500
MspA1I	CMGCKG	1 cut(s)	535
MspCI	CTTAAG	1 cut(s)	710
MspI	CCGG	3 cut(s)	38, 515, 1055
MspR9I	CCNGG	5 cut(s)	220, 666, 1055, 1299, 1544
Mva1269I	GAATGC	2 cut(s)	433, 1136
MvaI	CCWGG	4 cut(s)	220, 666, 1299, 1544
MvnI	CGCG	1 cut(s)	501
MwoI	GCNNNNNNNGC	5 cut(s)	391, 1186, 1206, 1455, 1464
NciI	CCSGG	1 cut(s)	1055
NdeII	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
NlaIII	CATG	9 cut(s)	170, 789, 886, 1106, 1213, 1231, 1235, 1442, 1499
NlaIV	GGNNCC	2 cut(s)	232, 1246
NmuCI	GTSAC	3 cut(s)	138, 475, 704
NsiI	ATGCAT	3 cut(s)	118, 1211, 1233
NspI	RCATGY	3 cut(s)	789, 1231, 1235
NspV	TTCGAA	3 cut(s)	284, 308, 1078
PagI	TCATGA	1 cut(s)	166
PceI	AGGCCT	1 cut(s)	627
PciI	ACATGT	1 cut(s)	785
PciSI	GCTCTTC	3 cut(s)	483, 504, 522
PcsI	WCGNNNNNNNCGW	1 cut(s)	628
PctI	GAATGC	2 cut(s)	433, 1136
PdmI	GAANNNNTTC	1 cut(s)	1553
PfeI	GAWTC	4 cut(s)	223, 643, 854, 1373
PflMI	CCANNNNNTGG	1 cut(s)	937
PfoI	TCCNGGA	1 cut(s)	218
PkrI	GCNGC	8 cut(s)	384, 433, 495, 498, 534, 1136, 1179, 1491
PleI	GAGTC	5 cut(s)	157, 589, 884, 1092, 1354
PpsI	GAGTC	5 cut(s)	157, 589, 884, 1092, 1354
PscI	ACATGT	1 cut(s)	785
Psp1406I	AACGTT	2 cut(s)	600, 1339
Psp6I	CCWGG	4 cut(s)	218, 664, 1297, 1542
PspFI	CCCAGC	1 cut(s)	1482
PspGI	CCWGG	4 cut(s)	218, 664, 1297, 1542
PspN4I	GGNNCC	2 cut(s)	232, 1246
PspPI	GGNCC	1 cut(s)	904
PstI	CTGCAG	1 cut(s)	498
PstNI	CAGNNNCTG	1 cut(s)	1163
PsuI	RGATCY	1 cut(s)	32
PvuII	CAGCTG	1 cut(s)	535
RsaI	GTAC	2 cut(s)	1246, 1474
RsaNI	GTAC	2 cut(s)	1245, 1473
RseI	CAYNNNNRTG	1 cut(s)	1500
SapI	GCTCTTC	3 cut(s)	483, 504, 522
SaqAI	TTAA	5 cut(s)	119, 711, 861, 978, 1582
SatI	GCNGC	8 cut(s)	383, 432, 494, 497, 533, 1135, 1178, 1490
Sau3AI	GATC	6 cut(s)	32, 130, 540, 547, 1290, 1435
Sau96I	GGNCC	1 cut(s)	904
SchI	GAGTC	5 cut(s)	157, 590, 884, 1092, 1355
ScrFI	CCNGG	5 cut(s)	220, 666, 1055, 1299, 1544
SduI	GDGCHC	2 cut(s)	235, 1036
SexAI	ACCWGGT	1 cut(s)	1297
SfaNI	GCATC	7 cut(s)	103, 224, 460, 772, 1006, 1048, 1146
SfcI	CTRYAG	1 cut(s)	494
SfuI	TTCGAA	3 cut(s)	284, 308, 1078
SinI	GGWCC	1 cut(s)	904
SmiMI	CAYNNNNRTG	1 cut(s)	1500
SmlI	CTYRAG	1 cut(s)	710
SmoI	CTYRAG	1 cut(s)	710
Sse9I	AATT	6 cut(s)	672, 694, 774, 864, 871, 1256
SseBI	AGGCCT	1 cut(s)	627
SsiI	CCGC	5 cut(s)	26, 291, 501, 1114, 1489
SspMI	CTAG	2 cut(s)	417, 702
StuI	AGGCCT	1 cut(s)	627
StyD4I	CCNGG	5 cut(s)	218, 664, 1053, 1297, 1542
TaaI	ACNGT	3 cut(s)	757, 1265, 1479
TaiI	ACGT	3 cut(s)	603, 1033, 1342
TasI	AATT	6 cut(s)	672, 694, 774, 864, 871, 1256
TatI	WGTACW	1 cut(s)	1472
TauI	GCSGC	1 cut(s)	1492
TfiI	GAWTC	4 cut(s)	223, 643, 854, 1373
Tru1I	TTAA	5 cut(s)	119, 711, 861, 978, 1582
Tru9I	TTAA	5 cut(s)	119, 711, 861, 978, 1582
TscAI	CASTG	1 cut(s)	1482
TseFI	GTSAC	3 cut(s)	138, 475, 704
TseI	GCWGC	7 cut(s)	382, 431, 493, 496, 532, 1134, 1177
Tsp45I	GTSAC	3 cut(s)	138, 475, 704
TspDTI	ATGAA	9 cut(s)	17, 183, 635, 687, 1226, 1341, 1443, 1541, 1566
TspGWI	ACGGA	3 cut(s)	24, 45, 1523
TspRI	CASTG	1 cut(s)	1482
Van91I	CCANNNNNTGG	1 cut(s)	937
Vha464I	CTTAAG	1 cut(s)	710
VneI	GTGCAC	1 cut(s)	1032
VpaK11BI	GGWCC	1 cut(s)	904
XapI	RAATTY	2 cut(s)	694, 864
XceI	RCATGY	3 cut(s)	789, 1231, 1235
XmnI	GAANNNNTTC	1 cut(s)	1553
XspI	CTAG	2 cut(s)	417, 702
Zsp2I	ATGCAT	3 cut(s)	118, 1211, 1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.