Rh7DG261500

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0008811
Physical Location & Seq
Forward (+)
27577667 .. 27583248
5582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG261500.1

Sequence Viewer

Length: 2064 bp
ATGAACGACGGAGGTAATAACCAAGCGGACGGATCTCCGGTGAGAAAGACCAGAAGAGGACGCAGAGGAGGAGGAGGAGGACGGGAACAACACCACCCTTCTCTCCAAATCGACGATGCATTAAAACTCAACGATCTTCAGTCACCTTTGACTTGTCAGCCTCAGACTCATGAACCCACCACCTCGACACCCAGAAACCACAGAAATCCGAGGTCGGCGTCCAGGAATCGAGGTGCCCTTGTATTCAAACCTCGGTTTGTCGAGAAATCTGAGTTGGGTTCTTCTTCGAATGGAGTAGTAGTGGGTTCTTCTTCGAAGAATGAACAAGTGGGTGCTTTGAATGCTCTGAGTATTGGTGAGGGAGAAAGTGGGCAGCAAGCGAAGCAAGACGAAGAGAGAGTTGGGGCTAGTGTAGAGAATGCTGCTGAGGTGTCTGAGCGTGGGAAAGAGGAGGATGATGATGCTGTGACAAGATTGGAAGAGCTGCAGCGCGGTGTCGAAGAGCCGGACTTGTCAGAAGAGCAGCTGAGGATCAATGATCAGGCTCAGGAGGATGAGTTGCTTGCTATGGAGTCCATTTTCGGAGACAATGTTTTCATCCTTGAAAGACAACGAGGCCTTCGATGTTTTCAGATTCATATACACATTGAAGCTCCTGGTGAAATTGCTGTTTCTACTAAGTTGAATTCATCTAGTGACCTAAATTCCACAAGTAGTAGTTCTGATGACTTCTCATACTCCTTCACAGTCCAGCATCTTCCACCAATTATGTTGACATGTTCGTTACCCAAATCATACCCAAGCCACCAACCACCTTATTTCACACTATCTGTTCAATGGTTGGATTCTATTACAATTTCCAATTTGTGTTCCATGCTGGACTCATTATGGATGGACCAACAAGGACAGGAGGTTATATACCAATGGGTGGAATGGCTACAAAGTTCTTCTCTTTCTCATCTTGGGTTTAATAAGGAAATAATGCTTGGTCCTTATGGTATTAGAGATGCTGGAGATAGACGTGCACTCACAGGAAGTGTATCCCTGGATGCAGATATTCCTTTTCTTCGAAGTTACAATAATGATAGACTCCATGAGAACTTCCGCAATAGTTTGCAGGAATGCTGCATCTGTTTTACTGAGTATGCAGGCGCTGAGTTTGTCAGGCTGCCTTGCAAGCATTTCTTCTGTTGGAAATGCATGAAGACTTATTCTGACATGCATGTCAAGGAAGGTACCATCACCAAATTGAACTGTCCTGATGCAAAATGTCAGGGTATGATCCCACCAGGTTTGCTAAAACAATTGCTTGGCGATGAAGAGTTTGAACGTTGGGAGTCCTTGATGTTAGAAAAAACACTCAATTCAATGTCTGATATTGTGTCTTGTCCAAGATGTAAAACACCCTGCATAGAAGATGCAGATGATCATGCCCAATGCTCAAAGTGCTTCTTTAGCTTCTGTACACTGTGCTGGGAGCGGCGCCATGTGGGTGTTCAATGTGTGACACCAGAAATGAAGCTCCGTATCCTCCAGGAACGTCAAAACTTCAGTCAGTTAGGCGATGAGCAAAAGCGGAGAGAAAAAGAAATGATCAATGAGATCCTCAGTGTGAGAGAAATACTTAGTGATGCAAAGCAATGCCCGGCTTGCAACATGGCAATATCGCGAGTTGAAGGTTGCAACAAGATGGTGTGTGAAAATTGTGGGCAGTACTTCTGCTACAACTGTGGAAGTGGAATAACGGGATATGAACATTTCAGGGATGGGCAATGTGAACTGTTCCCCCAAGAAACAATTCGGAACTGGCAGGCACAGATGAATCCTCGCCAGAATTTGGGACAGATACACGCCGAACAGGTCGCCGAACTGGTTGCCCAACAGGTAGCTGTACGCGGACAATTATGTCCCAGTTGTGGTCAGTTTAATGCAAAGTTTAACAACAACAATCATATATCTTGCTGGGCATGCCAACACCACTTTTGCTACTTATGCAAAGAGACCGTGAGGCGAAGCTCTCAGCATTATGGACCGAAGGGTTGCAAACAACACACACCAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006464 GO:0006807 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0023051 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0033143 GO:0035257 GO:0035258 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0060765 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1990234 GO:2000058 GO:2000060 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR RWD zf-C3HC4

Protein Analysis

687

Amino Acids

77.43

Weight (kDa)

5.67

Isoelectric Point (pI)

56.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RWD PF05773 181 - 315 1.2e-23 RWD domain
zf-RING_2 PF13639 373 - 410 5.8e-06 Ring finger domain
IBR PF01485 443 - 501 2.8e-08 IBR domain, a half RING-finger domain
IBR PF01485 542 - 579 2.3e-06 IBR domain, a half RING-finger domain
IBR_1 PF22191 545 - 578 2.2e-06 IBR domain
Rcat_RNF216 PF26200 546 - 589 1.6e-08 RNF216 Rcat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1223, 1905
Acc65I GGTACC 1 cut(s) 1235
AccB1I GGYRCC 3 cut(s) 233, 1235, 1482
AccB7I CCANNNNNTGG 2 cut(s) 928, 1837
AccBSI CCGCTC 1 cut(s) 1480
AccII CGCG 3 cut(s) 492, 1669, 1896
AciI CCGC 6 cut(s) 26, 492, 1105, 1480, 1576, 1896
AclI AACGTT 1 cut(s) 1330
AclWI GGATC 4 cut(s) 40, 539, 1276, 1597
AcsI RAATTY 3 cut(s) 685, 703, 1834
AcuI CTGAAG 2 cut(s) 122, 1534
AcyI GRCGYC 2 cut(s) 218, 1483
AfaI GTAC 4 cut(s) 1237, 1465, 1715, 1893
AfiI CCNNNNNNNGG 3 cut(s) 928, 1837, 1916
AflIII ACRYGT 1 cut(s) 776
AjiI CACGTC 1 cut(s) 1022
AjnI CCWGG 6 cut(s) 221, 655, 1044, 1288, 1533, 2056
AjuI GAANNNNNNNTTGG 8 cut(s) 257, 289, 384, 416, 969, 1001, 1782, 1814
AluBI AGCT 7 cut(s) 484, 526, 653, 1458, 1522, 1889, 2016
AluI AGCT 7 cut(s) 484, 526, 653, 1458, 1522, 1889, 2016
Alw21I GWGCWC 1 cut(s) 1027
Alw26I GTCTC 2 cut(s) 579, 1994
Alw44I GTGCAC 1 cut(s) 1023
AlwI GGATC 4 cut(s) 40, 539, 1276, 1597
AlwNI CAGNNNCTG 1 cut(s) 1154
AoxI GGCC 1 cut(s) 616
ApaLI GTGCAC 1 cut(s) 1023
ApeKI GCWGC 7 cut(s) 373, 422, 484, 487, 523, 1125, 1168
ApoI RAATTY 3 cut(s) 685, 703, 1834
ArsI GACNNNNNNTTYG 2 cut(s) 1537, 1569
Asp700I GAANNNNTTC 1 cut(s) 1797
Asp718I GGTACC 1 cut(s) 1235
AspLEI GCGC 3 cut(s) 492, 1154, 1485
AspS9I GGNCC 3 cut(s) 895, 989, 2030
AsuC2I CCSGG 1 cut(s) 1646
AsuHPI GGTGA 5 cut(s) 52, 135, 368, 671, 1234
AsuII TTCGAA 3 cut(s) 287, 314, 1069
AvaII GGWCC 3 cut(s) 895, 989, 2030
BaeGI GKGCMC 2 cut(s) 238, 1027
BanI GGYRCC 3 cut(s) 233, 1235, 1482
BbsI GAAGAC 1 cut(s) 1211
Bbv12I GWGCWC 1 cut(s) 1027
BbvCI CCTCAGC 2 cut(s) 426, 527
BbvI GCAGC 7 cut(s) 385, 409, 471, 499, 535, 1112, 1155
BccI CCATC 4 cut(s) 886, 1247, 1684, 1760
BcgI CGANNNNNNTGC 2 cut(s) 1856, 1890
BciT130I CCWGG 6 cut(s) 223, 657, 1046, 1290, 1535, 2058
BciVI GTATCC 2 cut(s) 1051, 1538
BclI TGATCA 3 cut(s) 538, 1426, 1593
BcnI CCSGG 1 cut(s) 1646
BcoDI GTCTC 2 cut(s) 579, 1994
BfaI CTAG 2 cut(s) 408, 693
BfmI CTRYAG 1 cut(s) 485
BfoI RGCGCY 2 cut(s) 1155, 1486
BfuI GTATCC 2 cut(s) 1051, 1538
BisI GCNGC 8 cut(s) 374, 423, 485, 488, 524, 1126, 1169, 1481
BlsI GCNGC 8 cut(s) 375, 424, 486, 489, 525, 1127, 1170, 1482
BmcAI AGTACT 1 cut(s) 1715
Bme1390I CCNGG 7 cut(s) 223, 657, 1046, 1290, 1535, 1646, 2058
Bme18I GGWCC 3 cut(s) 895, 989, 2030
BmgBI CACGTC 1 cut(s) 1022
BmgT120I GGNCC 3 cut(s) 895, 989, 2030
BmiI GGNNCC 3 cut(s) 235, 1237, 1484
BmrFI CCNGG 7 cut(s) 223, 657, 1046, 1290, 1535, 1646, 2058
BmrI ACTGGG 1 cut(s) 1905
BmsI GCATC 9 cut(s) 106, 451, 763, 997, 1039, 1137, 1252, 1408, 1621
BmuI ACTGGG 1 cut(s) 1905
BpiI GAAGAC 1 cut(s) 1211
BpmI CTGGAG 2 cut(s) 1032, 1517
Bpu10I CCTNAGC 3 cut(s) 426, 527, 546
Bpu14I TTCGAA 3 cut(s) 287, 314, 1069
BpuMI CCSGG 1 cut(s) 1646
BsaHI GRCGYC 2 cut(s) 218, 1483
BsaI GGTCTC 1 cut(s) 1994
BsaJI CCNNGG 3 cut(s) 209, 251, 1044
BsaWI WCCGGW 1 cut(s) 37
BsaXI ACNNNNNCTCC 6 cut(s) 285, 315, 542, 572, 576, 606
Bsc4I CCNNNNNNNGG 3 cut(s) 928, 1837, 1916
Bse1I ACTGG 3 cut(s) 1811, 1875, 1911
Bse3DI GCAATG 2 cut(s) 1646, 1778
BseBI CCWGG 6 cut(s) 223, 657, 1046, 1290, 1535, 2058
BseDI CCNNGG 3 cut(s) 209, 251, 1044
BseGI GGATG 6 cut(s) 460, 559, 597, 897, 1054, 1771
BseLI CCNNNNNNNGG 3 cut(s) 928, 1837, 1916
BseMI GCAATG 2 cut(s) 1646, 1778
BseNI ACTGG 3 cut(s) 1811, 1875, 1911
BseRI GAGGAG 5 cut(s) 81, 84, 87, 90, 464
BseSI GKGCMC 2 cut(s) 238, 1027
BseXI GCAGC 7 cut(s) 385, 409, 471, 499, 535, 1112, 1155
BseYI CCCAGC 2 cut(s) 1473, 1962
Bsh1236I CGCG 3 cut(s) 492, 1669, 1896
BshFI GGCC 1 cut(s) 618
BshNI GGYRCC 3 cut(s) 233, 1235, 1482
BsiHKAI GWGCWC 1 cut(s) 1027
BsiSI CCGG 3 cut(s) 38, 506, 1646
BslFI GGGAC 2 cut(s) 1854, 1893
BslI CCNNNNNNNGG 3 cut(s) 928, 1837, 1916
BsmAI GTCTC 2 cut(s) 579, 1994
BsmFI GGGAC 2 cut(s) 1854, 1893
BsmI GAATGC 3 cut(s) 346, 424, 1127
BsnI GGCC 1 cut(s) 618
Bso31I GGTCTC 1 cut(s) 1994
Bsp119I TTCGAA 3 cut(s) 287, 314, 1069
Bsp1286I GDGCHC 2 cut(s) 238, 1027
Bsp1407I TGTACA 1 cut(s) 1463
Bsp143I GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
Bsp68I TCGCGA 1 cut(s) 1669
BspACI CCGC 6 cut(s) 26, 492, 1105, 1480, 1576, 1896
BspANI GGCC 1 cut(s) 618
BspFNI CGCG 3 cut(s) 492, 1669, 1896
BspHI TCATGA 1 cut(s) 169
BspLI GGNNCC 3 cut(s) 235, 1237, 1484
BspMAI CTGCAG 1 cut(s) 489
BspPI GGATC 4 cut(s) 40, 539, 1276, 1597
BspQI GCTCTTC 3 cut(s) 474, 495, 513
BspT104I TTCGAA 3 cut(s) 287, 314, 1069
BspT107I GGYRCC 3 cut(s) 233, 1235, 1482
BspTNI GGTCTC 1 cut(s) 1994
BsrBI CCGCTC 1 cut(s) 1480
BsrDI GCAATG 2 cut(s) 1646, 1778
BsrGI TGTACA 1 cut(s) 1463
BsrI ACTGG 3 cut(s) 1811, 1875, 1911
BssECI CCNNGG 3 cut(s) 209, 251, 1044
BssMI GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
BssNI GRCGYC 2 cut(s) 218, 1483
Bst2UI CCWGG 6 cut(s) 223, 657, 1046, 1290, 1535, 2058
Bst4CI ACNGT 6 cut(s) 748, 1256, 1470, 1730, 1782, 2005
Bst6I CTCTTC 6 cut(s) 49, 387, 474, 495, 513, 1314
BstACI GRCGYC 2 cut(s) 218, 1483
BstAUI TGTACA 1 cut(s) 1463
BstBI TTCGAA 3 cut(s) 287, 314, 1069
BstC8I GCNNGC 7 cut(s) 378, 564, 1150, 1178, 1651, 1812, 1969
BstF5I GGATG 6 cut(s) 460, 559, 597, 897, 1054, 1771
BstFNI CGCG 3 cut(s) 492, 1669, 1896
BstH2I RGCGCY 2 cut(s) 1155, 1486
BstHHI GCGC 3 cut(s) 492, 1154, 1485
BstKTI GATC 8 cut(s) 35, 136, 534, 541, 1284, 1429, 1596, 1605
BstMAI GTCTC 2 cut(s) 579, 1994
BstMBI GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
BstMWI GCNNNNNNNGC 8 cut(s) 341, 382, 1177, 1446, 1455, 1650, 1968, 1992
BstNI CCWGG 6 cut(s) 223, 657, 1046, 1290, 1535, 2058
BstNSI RCATGY 4 cut(s) 780, 1222, 1226, 1971
BstSCI CCNGG 7 cut(s) 221, 655, 1044, 1288, 1533, 1644, 2056
BstSFI CTRYAG 1 cut(s) 485
BstSLI GKGCMC 2 cut(s) 238, 1027
BstUI CGCG 3 cut(s) 492, 1669, 1896
BstV1I GCAGC 7 cut(s) 385, 409, 471, 499, 535, 1112, 1155
BstV2I GAAGAC 1 cut(s) 1211
BstX2I RGATCY 2 cut(s) 32, 1602
BstYI RGATCY 2 cut(s) 32, 1602
BsuI GTATCC 2 cut(s) 1051, 1538
BsuRI GGCC 1 cut(s) 618
BtgZI GCGATG 2 cut(s) 1329, 1578
BtrI CACGTC 1 cut(s) 1022
BtsCI GGATG 6 cut(s) 460, 559, 597, 897, 1054, 1771
BtsIMutI CAGTG 2 cut(s) 1466, 1615
BtuMI TCGCGA 1 cut(s) 1669
Cac8I GCNNGC 7 cut(s) 378, 564, 1150, 1178, 1651, 1812, 1969
CaiI CAGNNNCTG 1 cut(s) 1154
CciI TCATGA 1 cut(s) 169
CfoI GCGC 3 cut(s) 492, 1154, 1485
Cfr13I GGNCC 3 cut(s) 895, 989, 2030
CseI GACGC 2 cut(s) 69, 207
CsiI ACCWGGT 1 cut(s) 1288
Csp6I GTAC 4 cut(s) 1236, 1464, 1714, 1892
CspCI CAANNNNNGTGG 2 cut(s) 1275, 1310
CviQI GTAC 4 cut(s) 1236, 1464, 1714, 1892
DinI GGCGCC 1 cut(s) 1484
DpnI GATC 8 cut(s) 34, 135, 533, 540, 1283, 1428, 1595, 1604
DpnII GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
DrdI GACNNNNNNGTC 2 cut(s) 1223, 1905
DseDI GACNNNNNNGTC 2 cut(s) 1223, 1905
Eam1104I CTCTTC 6 cut(s) 49, 387, 474, 495, 513, 1314
EarI CTCTTC 6 cut(s) 49, 387, 474, 495, 513, 1314
Eco147I AGGCCT 1 cut(s) 618
Eco31I GGTCTC 1 cut(s) 1994
Eco47I GGWCC 3 cut(s) 895, 989, 2030
Eco57I CTGAAG 2 cut(s) 122, 1534
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 6 cut(s) 221, 655, 1044, 1288, 1533, 2056
EcoT22I ATGCAT 3 cut(s) 121, 1202, 1224
EgeI GGCGCC 1 cut(s) 1484
EheI GGCGCC 1 cut(s) 1484
FalI AAGNNNNNCTT 4 cut(s) 1169, 1201, 1436, 1468
FaqI GGGAC 2 cut(s) 1854, 1893
FbaI TGATCA 3 cut(s) 538, 1426, 1593
Fnu4HI GCNGC 8 cut(s) 374, 423, 485, 488, 524, 1126, 1169, 1481
FokI GGATG 6 cut(s) 467, 566, 584, 904, 1061, 1778
Fsp4HI GCNGC 8 cut(s) 374, 423, 485, 488, 524, 1126, 1169, 1481
FspBI CTAG 2 cut(s) 408, 693
GlaI GCGC 3 cut(s) 491, 1153, 1484
GluI GCNGC 8 cut(s) 374, 423, 485, 488, 524, 1126, 1169, 1481
GsaI CCCAGC 2 cut(s) 1477, 1966
GsuI CTGGAG 2 cut(s) 1032, 1517
HaeII RGCGCY 2 cut(s) 1155, 1486
HaeIII GGCC 1 cut(s) 618
HapII CCGG 3 cut(s) 38, 506, 1646
HgaI GACGC 2 cut(s) 69, 207
HhaI GCGC 3 cut(s) 492, 1154, 1485
Hin1I GRCGYC 2 cut(s) 218, 1483
Hin6I GCGC 3 cut(s) 490, 1152, 1483
HinP1I GCGC 3 cut(s) 490, 1152, 1483
HincII GTYRAC 1 cut(s) 774
HindII GTYRAC 1 cut(s) 774
HinfI GANTC 9 cut(s) 166, 226, 572, 634, 845, 881, 1089, 1337, 1822
HpaII CCGG 3 cut(s) 38, 506, 1646
HphI GGTGA 5 cut(s) 52, 135, 368, 671, 1234
Hpy166II GTNNAC 4 cut(s) 774, 1025, 1466, 1778
Hpy188III TCNNGA 5 cut(s) 170, 262, 548, 1259, 1668
Hpy8I GTNNAC 4 cut(s) 774, 1025, 1466, 1778
Hpy99I CGWCG 2 cut(s) 11, 116
HpyAV CCTTC 6 cut(s) 108, 629, 751, 1226, 1670, 2029
HpyCH4III ACNGT 6 cut(s) 748, 1256, 1470, 1730, 1782, 2005
HpyCH4IV ACGT 3 cut(s) 1021, 1330, 1540
HpyF10VI GCNNNNNNNGC 8 cut(s) 341, 382, 1177, 1446, 1455, 1650, 1968, 1992
HpySE526I ACGT 3 cut(s) 1021, 1330, 1540
Hsp92I GRCGYC 2 cut(s) 218, 1483
HspAI GCGC 3 cut(s) 490, 1152, 1483
KasI GGCGCC 1 cut(s) 1482
KpnI GGTACC 1 cut(s) 1239
Ksp22I TGATCA 3 cut(s) 538, 1426, 1593
Kzo9I GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
LguI GCTCTTC 3 cut(s) 474, 495, 513
LmnI GCTCC 3 cut(s) 658, 1477, 1527
Lsp1109I GCAGC 7 cut(s) 385, 409, 471, 499, 535, 1112, 1155
LweI GCATC 9 cut(s) 106, 451, 763, 997, 1039, 1137, 1252, 1408, 1621
MabI ACCWGGT 1 cut(s) 1288
MaeI CTAG 2 cut(s) 408, 693
MaeII ACGT 3 cut(s) 1021, 1330, 1540
MaeIII GTNAC 6 cut(s) 141, 466, 695, 783, 1073, 1504
MalI GATC 8 cut(s) 34, 135, 533, 540, 1283, 1428, 1595, 1604
MbiI CCGCTC 1 cut(s) 1480
MboI GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
MfeI CAATTG 1 cut(s) 1304
MflI RGATCY 2 cut(s) 32, 1602
MhlI GDGCHC 2 cut(s) 238, 1027
Mly113I GGCGCC 1 cut(s) 1483
MlyI GAGTC 5 cut(s) 160, 581, 875, 1083, 1346
MmeI TCCRAC 2 cut(s) 822, 1172
Mph1103I ATGCAT 3 cut(s) 121, 1202, 1224
MroXI GAANNNNTTC 1 cut(s) 1797
MseI TTAA 4 cut(s) 122, 969, 1926, 1938
MslI CAYNNNNRTG 1 cut(s) 1491
MspA1I CMGCKG 1 cut(s) 526
MspI CCGG 3 cut(s) 38, 506, 1646
MspR9I CCNGG 7 cut(s) 223, 657, 1046, 1290, 1535, 1646, 2058
MunI CAATTG 1 cut(s) 1304
Mva1269I GAATGC 3 cut(s) 346, 424, 1127
MvaI CCWGG 6 cut(s) 223, 657, 1046, 1290, 1535, 2058
MvnI CGCG 3 cut(s) 492, 1669, 1896
MwoI GCNNNNNNNGC 8 cut(s) 341, 382, 1177, 1446, 1455, 1650, 1968, 1992
NarI GGCGCC 1 cut(s) 1483
NciI CCSGG 1 cut(s) 1646
NdeII GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
NlaIV GGNNCC 3 cut(s) 235, 1237, 1484
NmuCI GTSAC 4 cut(s) 141, 466, 695, 1504
NruI TCGCGA 1 cut(s) 1669
NsiI ATGCAT 3 cut(s) 121, 1202, 1224
NspI RCATGY 4 cut(s) 780, 1222, 1226, 1971
NspV TTCGAA 3 cut(s) 287, 314, 1069
PaeI GCATGC 1 cut(s) 1971
PagI TCATGA 1 cut(s) 169
PceI AGGCCT 1 cut(s) 618
PciI ACATGT 1 cut(s) 776
PciSI GCTCTTC 3 cut(s) 474, 495, 513
PcsI WCGNNNNNNNCGW 1 cut(s) 619
PctI GAATGC 3 cut(s) 346, 424, 1127
PdmI GAANNNNTTC 1 cut(s) 1797
PfeI GAWTC 4 cut(s) 226, 634, 845, 1822
PflMI CCANNNNNTGG 2 cut(s) 928, 1837
PfoI TCCNGGA 2 cut(s) 221, 1533
PkrI GCNGC 8 cut(s) 375, 424, 486, 489, 525, 1127, 1170, 1482
PleI GAGTC 5 cut(s) 160, 580, 875, 1083, 1345
PluTI GGCGCC 1 cut(s) 1486
PpsI GAGTC 5 cut(s) 160, 580, 875, 1083, 1345
PscI ACATGT 1 cut(s) 776
Psp1406I AACGTT 1 cut(s) 1330
Psp6I CCWGG 6 cut(s) 221, 655, 1044, 1288, 1533, 2056
PspFI CCCAGC 2 cut(s) 1473, 1962
PspGI CCWGG 6 cut(s) 221, 655, 1044, 1288, 1533, 2056
PspN4I GGNNCC 3 cut(s) 235, 1237, 1484
PspPI GGNCC 3 cut(s) 895, 989, 2030
PstI CTGCAG 1 cut(s) 489
PstNI CAGNNNCTG 1 cut(s) 1154
PsuI RGATCY 2 cut(s) 32, 1602
PvuII CAGCTG 1 cut(s) 526
RruI TCGCGA 1 cut(s) 1669
RsaI GTAC 4 cut(s) 1237, 1465, 1715, 1893
RsaNI GTAC 4 cut(s) 1236, 1464, 1714, 1892
RseI CAYNNNNRTG 1 cut(s) 1491
SapI GCTCTTC 3 cut(s) 474, 495, 513
SaqAI TTAA 4 cut(s) 122, 969, 1926, 1938
SatI GCNGC 8 cut(s) 374, 423, 485, 488, 524, 1126, 1169, 1481
Sau3AI GATC 8 cut(s) 32, 133, 531, 538, 1281, 1426, 1593, 1602
Sau96I GGNCC 3 cut(s) 895, 989, 2030
ScaI AGTACT 1 cut(s) 1715
SchI GAGTC 5 cut(s) 160, 581, 875, 1083, 1346
ScrFI CCNGG 7 cut(s) 223, 657, 1046, 1290, 1535, 1646, 2058
SduI GDGCHC 2 cut(s) 238, 1027
SexAI ACCWGGT 1 cut(s) 1288
SfaNI GCATC 9 cut(s) 106, 451, 763, 997, 1039, 1137, 1252, 1408, 1621
SfcI CTRYAG 1 cut(s) 485
SfoI GGCGCC 1 cut(s) 1484
SfuI TTCGAA 3 cut(s) 287, 314, 1069
SinI GGWCC 3 cut(s) 895, 989, 2030
SmiMI CAYNNNNRTG 1 cut(s) 1491
SphI GCATGC 1 cut(s) 1971
SseBI AGGCCT 1 cut(s) 618
SsiI CCGC 6 cut(s) 26, 492, 1105, 1480, 1576, 1896
SspDI GGCGCC 1 cut(s) 1482
SspMI CTAG 2 cut(s) 408, 693
StuI AGGCCT 1 cut(s) 618
StyD4I CCNGG 7 cut(s) 221, 655, 1044, 1288, 1533, 1644, 2056
TaaI ACNGT 6 cut(s) 748, 1256, 1470, 1730, 1782, 2005
TaiI ACGT 3 cut(s) 1024, 1333, 1543
TaqI TCGA 9 cut(s) 111, 185, 229, 261, 287, 314, 498, 622, 1069
TaqII GACCGA 1 cut(s) 2047
TatI WGTACW 2 cut(s) 1463, 1713
TauI GCSGC 1 cut(s) 1483
TfiI GAWTC 4 cut(s) 226, 634, 845, 1822
Tru1I TTAA 4 cut(s) 122, 969, 1926, 1938
Tru9I TTAA 4 cut(s) 122, 969, 1926, 1938
TscAI CASTG 2 cut(s) 1473, 1615
TseFI GTSAC 4 cut(s) 141, 466, 695, 1504
TseI GCWGC 7 cut(s) 373, 422, 484, 487, 523, 1125, 1168
Tsp45I GTSAC 4 cut(s) 141, 466, 695, 1504
TspGWI ACGGA 3 cut(s) 24, 45, 1514
TspRI CASTG 2 cut(s) 1473, 1615
Van91I CCANNNNNTGG 2 cut(s) 928, 1837
VneI GTGCAC 1 cut(s) 1023
VpaK11BI GGWCC 3 cut(s) 895, 989, 2030
XapI RAATTY 3 cut(s) 685, 703, 1834
XceI RCATGY 4 cut(s) 780, 1222, 1226, 1971
XmnI GAANNNNTTC 1 cut(s) 1797
XspI CTAG 2 cut(s) 408, 693
ZrmI AGTACT 1 cut(s) 1715
Zsp2I ATGCAT 3 cut(s) 121, 1202, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.