Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004590.1

Orthogroup ID

OG0006910

Physical Location & Seq

Genomic Coordinates Reverse (-)

39922 .. 47508

Gene Structure 7587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004590.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

atggacgacattcattccctcctggtccgcactcatcatgctttgaccaacttcaccagggaagtccggaacatgcagcgccaccctactaggtttagcgttcctgggccgtccactacagtcaaggaggaagaagcacaggaggaaagcactgcttccatggacagcgaggagtttcaagataccgtgaccaagggtcccgaccaacccgacctgatttttccggcgctgtcgaacgtcctccagccaaggacccgggccagaccagctcgtcttggcctgctcgtcctccctgtggtgtcatctcgccctgccaccgcccccagtcggagatcgaagccaccccagactcacgatcgggaaccgatcgagcgaaatttctggaaccgaatcgaagccattgttgccattttcttgttcctaacagccaccaccaagacggcagcagggcgctccgacgacaacctcctctctctgaccgttctggctgttaggatccgaaacgtcatcgtcttcctcttcgacttagagactctgatcctacagatcggtgtgaacagagatcgctgctcgtctctaagaagatgggaaccgatggtggtgattagtcagcggcagcggtgtcgtctctatctcttcgaggaatcctatgtctcagtaggggcaggtgatagaggcatcataaaacaacgtcgaagcaagtacatcgatggaggaggctttacacttatagcaatttggggtatgacttcgcccgatgatgcatctaataacaaacccctaaccttctggcttcgtcgttctgttaataccactgaagctgatgaggagacaatttcagactccagtcttcagggtagtgatgcttcccttcatggcagtgatgctactggtactggtactgctaataatactattccaactgatgatgatactcatgcagatgccacttgtcagggcagtgatgcttctcttcttggcagtaatgcttcccttcttggtggtgatgctactgatactggtacggccagttttcctcatactgaggccactgcaaggcagtacgttgaggatgatactactattgaaggtgacaaatctagtggagatgattgtagtcatcctcctgttgcagataatacttctgttccagccacttcttgtgctcctgctacttctaccattccttgtgctgaccccacgctgtaccggcagtatctcgatgatgatacaattgttggaggtgatggtactactgcagatacttctattgcagcgggtagtgatactagtgcttctcttccccgtgatggtgacgaaacccttgataatgtcactgcaactcctgcacttggtgatgctactgcttcagccaccagtcctcaagttgccacaagtgttgtcagtggggcccgctcgtggttcggtgttgcaccaatgacatttgcactaatagctgtcttagcgctattgctttcctcagcatattacagtgctcatgcttccatcagtgaccagggttccttgctttctccgcgggtcattagatggctacctaccgggatcatacctcctgagcagatctctcgcctacctttggactacattacttctcttcctattgagtacctcgcagagcagccagttgagatcattgcacgactaccacctgagctcatatctcatctgcctaccccagtcatctctgagcttcatgtatcttctatttggcagctccatcttcgccccatgagatggctcagcgtcggggttcatgcttggcagaggctgttatctacggtttttatgtatgtttttggattcatgaggcgactatataggcgttttgggcgtgatggcaggcaaccatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

623

Amino Acids

67.91

Weight (kDa)

5.22

Isoelectric Point (pI)

48.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006910)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g05190 FvH4_2g05191
rosa_chinensis	RchiOBHm_Chr1g0337181 RchiOBHm_Chr2g0121011
rosa_laevigata	RLG00000014847 RLG00000014850 RLG00000023918 RLG00000036182 RLG00000036367
rosa_multiflora	Rmu_sc0000903.1_g000029 Rmu_sc0002973.1_g000006 Rmu_sc0004590.1_g000006 Rmu_sc0004976.1_g000015 Rmu_sc0005657.1_g000072 Rmu_sc0008105.1_g000001 Rmu_sc0009887.1_g000001 Rmu_sc0015317.1_g000001 Rmu_sc0027068.1_g000002 Rmu_sc0030281.1_g000001 Rmu_ssc0000259.1_g000046
rosa_roxburghii	Rroxscaffold_5G00333420 Rroxscaffold_7G00210090 Rroxscaffold_7G00210150
rosa_samantha	Rh3CG243900
rosa_wichuraiana	Rw6G006560 Rw6G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	656
AasI	GACNNNNNNGTC	1 cut(s)	270
Acc36I	ACCTGC	1 cut(s)	656
AccB7I	CCANNNNNTGG	1 cut(s)	1755
AccBSI	CCGCTC	1 cut(s)	1416
AccII	CGCG	1 cut(s)	1537
AccIII	TCCGGA	1 cut(s)	66
AciI	CCGC	8 cut(s)	28, 318, 613, 619, 1277, 1414, 1535, 1537
AclWI	GGATC	4 cut(s)	490, 503, 532, 1571
AcoI	YGGCCR	1 cut(s)	1026
AcsI	RAATTY	1 cut(s)	376
AcuI	CTGAAG	3 cut(s)	836, 837, 1353
AdeI	CACNNNGTG	1 cut(s)	1355
AfaI	GTAC	8 cut(s)	704, 895, 901, 1024, 1064, 1208, 1252, 1628
AfeI	AGCGCT	1 cut(s)	1467
AfiI	CCNNNNNNNGG	8 cut(s)	295, 327, 1056, 1310, 1352, 1419, 1597, 1755
AgsI	TTSAA	2 cut(s)	179, 1088
AhdI	GACNNNNNGTC	1 cut(s)	195
AhlI	ACTAGT	1 cut(s)	1289
AjnI	CCWGG	4 cut(s)	21, 56, 103, 1515
AluBI	AGCT	6 cut(s)	269, 821, 1457, 1675, 1711, 1735
AluI	AGCT	6 cut(s)	269, 821, 1457, 1675, 1711, 1735
Alw21I	GWGCWC	3 cut(s)	1168, 1498, 1677
Alw26I	GTCTC	5 cut(s)	524, 579, 632, 658, 824
AlwI	GGATC	4 cut(s)	490, 503, 532, 1571
AlwNI	CAGNNNCTG	1 cut(s)	1789
Ama87I	CYCGRG	1 cut(s)	255
Aor13HI	TCCGGA	1 cut(s)	66
Aor51HI	AGCGCT	1 cut(s)	1467
AoxI	GGCC	6 cut(s)	107, 258, 277, 1026, 1047, 1410
ApaI	GGGCCC	1 cut(s)	1414
ApeKI	GCWGC	7 cut(s)	76, 443, 567, 616, 1274, 1639, 1732
ApoI	RAATTY	1 cut(s)	376
AspLEI	GCGC	4 cut(s)	81, 229, 453, 1468
AspS9I	GGNCC	7 cut(s)	25, 107, 197, 252, 258, 1410, 1411
AsuC2I	CCSGG	3 cut(s)	256, 257, 1561
AsuHPI	GGTGA	8 cut(s)	46, 613, 680, 1016, 1103, 1256, 1325, 1367
AvaI	CYCGRG	1 cut(s)	255
AvaII	GGWCC	3 cut(s)	25, 197, 252
BaeGI	GKGCMC	1 cut(s)	1414
BaeI	ACNNNNGTAYC	2 cut(s)	1221, 1254
BamHI	GGATCC	1 cut(s)	495
BanII	GRGCYC	2 cut(s)	1414, 1677
BarI	GAAGNNNNNNTAC	2 cut(s)	850, 882
BauI	CACGAG	1 cut(s)	1417
BbsI	GAAGAC	2 cut(s)	505, 842
Bbv12I	GWGCWC	3 cut(s)	1168, 1498, 1677
BbvCI	CCTCAGC	1 cut(s)	1480
BbvI	GCAGC	7 cut(s)	88, 455, 554, 628, 1286, 1651, 1744
BceAI	ACGGC	3 cut(s)	94, 456, 1041
BcgI	CGANNNNNNTGC	6 cut(s)	605, 639, 688, 722, 1568, 1602
BciT130I	CCWGG	4 cut(s)	23, 58, 105, 1517
BcnI	CCSGG	3 cut(s)	256, 257, 1561
BcoDI	GTCTC	5 cut(s)	524, 579, 632, 658, 824
BcuI	ACTAGT	1 cut(s)	1289
BfaI	CTAG	3 cut(s)	90, 1101, 1290
BfmI	CTRYAG	3 cut(s)	117, 542, 1257
BfoI	RGCGCY	4 cut(s)	82, 230, 454, 1469
BfuAI	ACCTGC	1 cut(s)	656
BglII	AGATCT	1 cut(s)	1581
BisI	GCNGC	8 cut(s)	77, 444, 568, 614, 617, 1275, 1640, 1733
BlpI	GCTNAGC	1 cut(s)	1760
BlsI	GCNGC	8 cut(s)	78, 445, 569, 615, 618, 1276, 1641, 1734
Bme1390I	CCNGG	7 cut(s)	23, 58, 105, 256, 257, 1517, 1561
Bme18I	GGWCC	3 cut(s)	25, 197, 252
BmeRI	GACNNNNNGTC	1 cut(s)	195
BmeT110I	CYCGRG	1 cut(s)	255
BmgT120I	GGNCC	7 cut(s)	25, 107, 197, 252, 258, 1410, 1411
BmrFI	CCNGG	7 cut(s)	23, 58, 105, 256, 257, 1517, 1561
BmrI	ACTGGG	2 cut(s)	318, 1691
BmsI	GCATC	9 cut(s)	687, 751, 773, 853, 874, 934, 955, 997, 1348
BmuI	ACTGGG	2 cut(s)	318, 1691
BoxI	GACNNNNGTC	1 cut(s)	846
BpiI	GAAGAC	2 cut(s)	505, 842
BplI	GAGNNNNNCTC	2 cut(s)	1568, 1600
BpmI	CTGGAG	2 cut(s)	227, 829
Bpu10I	CCTNAGC	3 cut(s)	1480, 1575, 1671
Bpu1102I	GCTNAGC	1 cut(s)	1760
BpuEI	CTTGAG	1 cut(s)	1368
BpuMI	CCSGG	3 cut(s)	256, 257, 1561
Bsa29I	ATCGAT	1 cut(s)	708
BsaJI	CCNNGG	8 cut(s)	57, 104, 159, 192, 248, 255, 1516, 1535
BsaWI	WCCGGW	1 cut(s)	66
BsaXI	ACNNNNNCTCC	2 cut(s)	1327, 1357
Bsc4I	CCNNNNNNNGG	8 cut(s)	295, 327, 1056, 1310, 1352, 1419, 1597, 1755
Bse118I	RCCGGY	1 cut(s)	1209
Bse1I	ACTGG	9 cut(s)	324, 846, 895, 901, 1024, 1029, 1377, 1643, 1697
Bse3DI	GCAATG	1 cut(s)	1653
BseAI	TCCGGA	1 cut(s)	66
BseBI	CCWGG	4 cut(s)	23, 58, 105, 1517
BseCI	ATCGAT	1 cut(s)	708
BseDI	CCNNGG	8 cut(s)	57, 104, 159, 192, 248, 255, 1516, 1535
BseGI	GGATG	2 cut(s)	1078, 1120
BseLI	CCNNNNNNNGG	8 cut(s)	295, 327, 1056, 1310, 1352, 1419, 1597, 1755
BseMI	GCAATG	1 cut(s)	1653
BseMII	CTCAG	7 cut(s)	669, 1035, 1494, 1566, 1662, 1698, 1774
BseNI	ACTGG	9 cut(s)	324, 846, 895, 901, 1024, 1029, 1377, 1643, 1697
BseRI	GAGGAG	4 cut(s)	185, 458, 729, 842
BseSI	GKGCMC	1 cut(s)	1414
BseXI	GCAGC	7 cut(s)	88, 455, 554, 628, 1286, 1651, 1744
BsgI	GTGCAG	1 cut(s)	1332
Bsh1236I	CGCG	1 cut(s)	1537
Bsh1285I	CGRYCG	2 cut(s)	358, 369
BshFI	GGCC	6 cut(s)	109, 260, 279, 1028, 1049, 1412
BshVI	ATCGAT	1 cut(s)	708
BsiEI	CGRYCG	2 cut(s)	358, 369
BsiHKAI	GWGCWC	3 cut(s)	1168, 1498, 1677
BsiHKCI	CYCGRG	1 cut(s)	255
BsiSI	CCGG	5 cut(s)	67, 224, 256, 1210, 1560
BslFI	GGGAC	1 cut(s)	183
BslI	CCNNNNNNNGG	8 cut(s)	295, 327, 1056, 1310, 1352, 1419, 1597, 1755
BsmAI	GTCTC	5 cut(s)	524, 579, 632, 658, 824
BsmBI	CGTCTC	2 cut(s)	579, 632
BsmFI	GGGAC	1 cut(s)	183
BsnI	GGCC	6 cut(s)	109, 260, 279, 1028, 1049, 1412
BsoBI	CYCGRG	1 cut(s)	255
Bsp120I	GGGCCC	1 cut(s)	1410
Bsp1286I	GDGCHC	4 cut(s)	1168, 1414, 1498, 1677
Bsp13I	TCCGGA	1 cut(s)	66
Bsp1720I	GCTNAGC	1 cut(s)	1760
Bsp19I	CCATGG	1 cut(s)	159
BspACI	CCGC	8 cut(s)	28, 318, 613, 619, 1277, 1414, 1535, 1537
BspANI	GGCC	6 cut(s)	109, 260, 279, 1028, 1049, 1412
BspCNI	CTCAG	7 cut(s)	668, 1036, 1493, 1567, 1663, 1699, 1773
BspDI	ATCGAT	1 cut(s)	708
BspEI	TCCGGA	1 cut(s)	66
BspFNI	CGCG	1 cut(s)	1537
BspHI	TCATGA	1 cut(s)	1824
BspMAI	CTGCAG	1 cut(s)	1261
BspMI	ACCTGC	1 cut(s)	656
BspPI	GGATC	4 cut(s)	490, 503, 532, 1571
BsrBI	CCGCTC	1 cut(s)	1416
BsrDI	GCAATG	1 cut(s)	1653
BsrFI	RCCGGY	1 cut(s)	1209
BsrI	ACTGG	9 cut(s)	324, 846, 895, 901, 1024, 1029, 1377, 1643, 1697
BssAI	RCCGGY	1 cut(s)	1209
BssECI	CCNNGG	8 cut(s)	57, 104, 159, 192, 248, 255, 1516, 1535
BssSI	CACGAG	1 cut(s)	1417
BssT1I	CCWWGG	3 cut(s)	159, 192, 248
Bst2BI	CACGAG	1 cut(s)	1417
Bst2UI	CCWGG	4 cut(s)	23, 58, 105, 1517
Bst4CI	ACNGT	5 cut(s)	121, 187, 481, 1493, 1801
Bst6I	CTCTTC	5 cut(s)	524, 641, 978, 1305, 1620
BstAPI	GCANNNNNTGC	1 cut(s)	1346
BstC8I	GCNNGC	3 cut(s)	281, 1414, 1862
BstDSI	CCRYGG	2 cut(s)	159, 1535
BstF5I	GGATG	2 cut(s)	1078, 1120
BstFNI	CGCG	1 cut(s)	1537
BstH2I	RGCGCY	4 cut(s)	82, 230, 454, 1469
BstHHI	GCGC	4 cut(s)	81, 229, 453, 1468
BstMAI	GTCTC	5 cut(s)	524, 579, 632, 658, 824
BstMCI	CGRYCG	2 cut(s)	358, 369
BstMWI	GCNNNNNNNGC	8 cut(s)	266, 404, 1210, 1346, 1454, 1463, 1534, 1849
BstNI	CCWGG	4 cut(s)	23, 58, 105, 1517
BstNSI	RCATGY	1 cut(s)	76
BstPAI	GACNNNNGTC	1 cut(s)	846
BstSCI	CCNGG	7 cut(s)	21, 56, 103, 254, 255, 1515, 1559
BstSFI	CTRYAG	3 cut(s)	117, 542, 1257
BstSLI	GKGCMC	1 cut(s)	1414
BstUI	CGCG	1 cut(s)	1537
BstV1I	GCAGC	7 cut(s)	88, 455, 554, 628, 1286, 1651, 1744
BstV2I	GAAGAC	2 cut(s)	505, 842
BstX2I	RGATCY	2 cut(s)	495, 1581
BstYI	RGATCY	2 cut(s)	495, 1581
Bsu15I	ATCGAT	1 cut(s)	708
BsuRI	GGCC	6 cut(s)	109, 260, 279, 1028, 1049, 1412
BsuTUI	ATCGAT	1 cut(s)	708
BtgI	CCRYGG	2 cut(s)	159, 1535
BtsCI	GGATG	2 cut(s)	1078, 1120
BtsI	GCAGTG	5 cut(s)	150, 886, 967, 1050, 1335
BtsIMutI	CAGTG	9 cut(s)	150, 813, 886, 967, 1050, 1335, 1411, 1498, 1516
BveI	ACCTGC	1 cut(s)	656
Cac8I	GCNNGC	3 cut(s)	281, 1414, 1862
CaiI	CAGNNNCTG	1 cut(s)	1789
CciI	TCATGA	1 cut(s)	1824
CfoI	GCGC	4 cut(s)	81, 229, 453, 1468
Cfr10I	RCCGGY	1 cut(s)	1209
Cfr13I	GGNCC	7 cut(s)	25, 107, 197, 252, 258, 1410, 1411
Cfr42I	CCGCGG	1 cut(s)	1538
Cfr9I	CCCGGG	1 cut(s)	255
ClaI	ATCGAT	1 cut(s)	708
CseI	GACGC	1 cut(s)	1753
Csp6I	GTAC	8 cut(s)	703, 894, 900, 1023, 1063, 1207, 1251, 1627
CspCI	CAANNNNNGTGG	4 cut(s)	1084, 1119, 1381, 1416
CviQI	GTAC	8 cut(s)	703, 894, 900, 1023, 1063, 1207, 1251, 1627
DraIII	CACNNNGTG	1 cut(s)	1355
DrdI	GACNNNNNNGTC	1 cut(s)	270
DriI	GACNNNNNGTC	1 cut(s)	195
DseDI	GACNNNNNNGTC	1 cut(s)	270
EaeI	YGGCCR	1 cut(s)	1026
Eam1104I	CTCTTC	5 cut(s)	524, 641, 978, 1305, 1620
Eam1105I	GACNNNNNGTC	1 cut(s)	195
EarI	CTCTTC	5 cut(s)	524, 641, 978, 1305, 1620
Ecl136II	GAGCTC	1 cut(s)	1675
Eco130I	CCWWGG	3 cut(s)	159, 192, 248
Eco24I	GRGCYC	2 cut(s)	1414, 1677
Eco47I	GGWCC	3 cut(s)	25, 197, 252
Eco47III	AGCGCT	1 cut(s)	1467
Eco53kI	GAGCTC	1 cut(s)	1675
Eco57I	CTGAAG	3 cut(s)	836, 837, 1353
Eco88I	CYCGRG	1 cut(s)	255
EcoICRI	GAGCTC	1 cut(s)	1675
EcoO109I	RGGNCCY	3 cut(s)	197, 252, 1410
EcoRII	CCWGG	4 cut(s)	21, 56, 103, 1515
EcoT14I	CCWWGG	3 cut(s)	159, 192, 248
EcoT22I	ATGCAT	1 cut(s)	766
EcoT38I	GRGCYC	2 cut(s)	1414, 1677
ErhI	CCWWGG	3 cut(s)	159, 192, 248
Esp3I	CGTCTC	2 cut(s)	579, 632
FalI	AAGNNNNNCTT	2 cut(s)	139, 171
FaqI	GGGAC	1 cut(s)	183
FauI	CCCGC	3 cut(s)	1270, 1421, 1530
Fnu4HI	GCNGC	8 cut(s)	77, 444, 568, 614, 617, 1275, 1640, 1733
FokI	GGATG	2 cut(s)	1085, 1107
FriOI	GRGCYC	2 cut(s)	1414, 1677
Fsp4HI	GCNGC	8 cut(s)	77, 444, 568, 614, 617, 1275, 1640, 1733
FspBI	CTAG	3 cut(s)	90, 1101, 1290
GlaI	GCGC	4 cut(s)	80, 228, 452, 1467
GluI	GCNGC	8 cut(s)	77, 444, 568, 614, 617, 1275, 1640, 1733
GsuI	CTGGAG	2 cut(s)	227, 829
HaeII	RGCGCY	4 cut(s)	82, 230, 454, 1469
HaeIII	GGCC	6 cut(s)	109, 260, 279, 1028, 1049, 1412
HapII	CCGG	5 cut(s)	67, 224, 256, 1210, 1560
HgaI	GACGC	1 cut(s)	1753
HhaI	GCGC	4 cut(s)	81, 229, 453, 1468
Hin6I	GCGC	4 cut(s)	79, 227, 451, 1466
HinP1I	GCGC	4 cut(s)	79, 227, 451, 1466
HinfI	GANTC	6 cut(s)	349, 390, 532, 644, 842, 1821
HpaII	CCGG	5 cut(s)	67, 224, 256, 1210, 1560
HphI	GGTGA	8 cut(s)	46, 613, 680, 1016, 1103, 1256, 1325, 1367
Hpy166II	GTNNAC	2 cut(s)	114, 556
Hpy188I	TCNGA	7 cut(s)	330, 457, 477, 500, 537, 841, 1708
Hpy188III	TCNNGA	9 cut(s)	67, 179, 200, 353, 359, 382, 1220, 1574, 1825
Hpy8I	GTNNAC	2 cut(s)	114, 556
Hpy99I	CGWCG	4 cut(s)	461, 696, 801, 1769
HpyAV	CCTTC	4 cut(s)	796, 881, 1004, 1082
HpyCH4III	ACNGT	5 cut(s)	121, 187, 481, 1493, 1801
HpyCH4IV	ACGT	4 cut(s)	237, 504, 691, 1065
HpyF10VI	GCNNNNNNNGC	8 cut(s)	266, 404, 1210, 1346, 1454, 1463, 1534, 1849
HpySE526I	ACGT	4 cut(s)	237, 504, 691, 1065
HspAI	GCGC	4 cut(s)	79, 227, 451, 1466
KflI	GGGWCCC	1 cut(s)	197
Kpn2I	TCCGGA	1 cut(s)	66
KspI	CCGCGG	1 cut(s)	1538
LmnI	GCTCC	3 cut(s)	458, 1171, 1740
Lsp1109I	GCAGC	7 cut(s)	88, 455, 554, 628, 1286, 1651, 1744
LweI	GCATC	9 cut(s)	687, 751, 773, 853, 874, 934, 955, 997, 1348
MaeI	CTAG	3 cut(s)	90, 1101, 1290
MaeII	ACGT	4 cut(s)	237, 504, 691, 1065
MaeIII	GTNAC	5 cut(s)	187, 1091, 1313, 1333, 1511
MbiI	CCGCTC	1 cut(s)	1416
MfeI	CAATTG	1 cut(s)	1233
MflI	RGATCY	2 cut(s)	495, 1581
MhlI	GDGCHC	4 cut(s)	1168, 1414, 1498, 1677
MluCI	AATT	4 cut(s)	376, 735, 834, 1233
MlyI	GAGTC	3 cut(s)	343, 526, 836
MmeI	TCCRAC	4 cut(s)	308, 480, 944, 1219
Mph1103I	ATGCAT	1 cut(s)	766
MroI	TCCGGA	1 cut(s)	66
MseI	TTAA	1 cut(s)	807
MslI	CAYNNNNRTG	2 cut(s)	879, 942
MspA1I	CMGCKG	4 cut(s)	613, 619, 1277, 1537
MspI	CCGG	5 cut(s)	67, 224, 256, 1210, 1560
MspR9I	CCNGG	7 cut(s)	23, 58, 105, 256, 257, 1517, 1561
MunI	CAATTG	1 cut(s)	1233
MvaI	CCWGG	4 cut(s)	23, 58, 105, 1517
MvnI	CGCG	1 cut(s)	1537
MwoI	GCNNNNNNNGC	8 cut(s)	266, 404, 1210, 1346, 1454, 1463, 1534, 1849
NciI	CCSGG	3 cut(s)	256, 257, 1561
NcoI	CCATGG	1 cut(s)	159
NmuCI	GTSAC	5 cut(s)	187, 1091, 1313, 1333, 1511
NsiI	ATGCAT	1 cut(s)	766
NspI	RCATGY	1 cut(s)	76
PagI	TCATGA	1 cut(s)	1824
PaqCI	CACCTGC	1 cut(s)	656
PfeI	GAWTC	3 cut(s)	390, 644, 1821
PflMI	CCANNNNNTGG	1 cut(s)	1755
PkrI	GCNGC	8 cut(s)	78, 445, 569, 615, 618, 1276, 1641, 1734
Ple19I	CGATCG	2 cut(s)	358, 369
PleI	GAGTC	3 cut(s)	343, 526, 836
PpsI	GAGTC	3 cut(s)	343, 526, 836
PpuMI	RGGWCCY	2 cut(s)	197, 252
PshAI	GACNNNNGTC	1 cut(s)	846
Psp124BI	GAGCTC	1 cut(s)	1677
Psp5II	RGGWCCY	2 cut(s)	197, 252
Psp6I	CCWGG	4 cut(s)	21, 56, 103, 1515
PspGI	CCWGG	4 cut(s)	21, 56, 103, 1515
PspOMI	GGGCCC	1 cut(s)	1410
PspPI	GGNCC	7 cut(s)	25, 107, 197, 252, 258, 1410, 1411
PspPPI	RGGWCCY	2 cut(s)	197, 252
PstI	CTGCAG	1 cut(s)	1261
PstNI	CAGNNNCTG	1 cut(s)	1789
PsuI	RGATCY	2 cut(s)	495, 1581
PvuI	CGATCG	2 cut(s)	358, 369
RsaI	GTAC	8 cut(s)	704, 895, 901, 1024, 1064, 1208, 1252, 1628
RsaNI	GTAC	8 cut(s)	703, 894, 900, 1023, 1063, 1207, 1251, 1627
RseI	CAYNNNNRTG	2 cut(s)	879, 942
SacI	GAGCTC	1 cut(s)	1677
SacII	CCGCGG	1 cut(s)	1538
SaqAI	TTAA	1 cut(s)	807
SatI	GCNGC	8 cut(s)	77, 444, 568, 614, 617, 1275, 1640, 1733
Sau96I	GGNCC	7 cut(s)	25, 107, 197, 252, 258, 1410, 1411
SchI	GAGTC	3 cut(s)	343, 526, 836
ScrFI	CCNGG	7 cut(s)	23, 58, 105, 256, 257, 1517, 1561
SduI	GDGCHC	4 cut(s)	1168, 1414, 1498, 1677
SfaNI	GCATC	9 cut(s)	687, 751, 773, 853, 874, 934, 955, 997, 1348
SfcI	CTRYAG	3 cut(s)	117, 542, 1257
Sfr303I	CCGCGG	1 cut(s)	1538
SgrBI	CCGCGG	1 cut(s)	1538
SinI	GGWCC	3 cut(s)	25, 197, 252
SmaI	CCCGGG	1 cut(s)	257
SmiMI	CAYNNNNRTG	2 cut(s)	879, 942
SmlI	CTYRAG	1 cut(s)	1383
SmoI	CTYRAG	1 cut(s)	1383
SpeI	ACTAGT	1 cut(s)	1289
Sse9I	AATT	4 cut(s)	376, 735, 834, 1233
SsiI	CCGC	8 cut(s)	28, 318, 613, 619, 1277, 1414, 1535, 1537
SspMI	CTAG	3 cut(s)	90, 1101, 1290
SstI	GAGCTC	1 cut(s)	1677
StyD4I	CCNGG	7 cut(s)	21, 56, 103, 254, 255, 1515, 1559
StyI	CCWWGG	3 cut(s)	159, 192, 248
TaaI	ACNGT	5 cut(s)	121, 187, 481, 1493, 1801
TaiI	ACGT	4 cut(s)	240, 507, 694, 1068
TaqI	TCGA	9 cut(s)	233, 335, 369, 393, 522, 639, 694, 708, 1221
TasI	AATT	4 cut(s)	376, 735, 834, 1233
TatI	WGTACW	1 cut(s)	702
TauI	GCSGC	1 cut(s)	616
TfiI	GAWTC	3 cut(s)	390, 644, 1821
Tru1I	TTAA	1 cut(s)	807
Tru9I	TTAA	1 cut(s)	807
TscAI	CASTG	9 cut(s)	157, 820, 886, 967, 1057, 1342, 1411, 1498, 1516
TseFI	GTSAC	5 cut(s)	187, 1091, 1313, 1333, 1511
TseI	GCWGC	7 cut(s)	76, 443, 567, 616, 1274, 1639, 1732
Tsp45I	GTSAC	5 cut(s)	187, 1091, 1313, 1333, 1511
TspDTI	ATGAA	4 cut(s)	863, 1703, 1763, 1813
TspMI	CCCGGG	1 cut(s)	255
TspRI	CASTG	9 cut(s)	157, 820, 886, 967, 1057, 1342, 1411, 1498, 1516
Van91I	CCANNNNNTGG	1 cut(s)	1755
VpaK11BI	GGWCC	3 cut(s)	25, 197, 252
XapI	RAATTY	1 cut(s)	376
XceI	RCATGY	1 cut(s)	76
XmaI	CCCGGG	1 cut(s)	255
XspI	CTAG	3 cut(s)	90, 1101, 1290
Zsp2I	ATGCAT	1 cut(s)	766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.