Auxin responsive protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G43040 AT1G43040 AT5G42410 |
| fragaria_vesca | FvH4_5g26860 FvH4_5g26890 |
| rosa_chinensis | RchiOBHm_Chr7g0217801 RchiOBHm_Chr7g0217811 RchiOBHm_Chr7g0217831 RchiOBHm_Chr7g0217911 |
| rosa_laevigata | RLG00000002434 RLG00000002435 RLG00000002436 RLG00000002438 |
| rosa_multiflora | Rmu_sc0000202.1_g000027 Rmu_sc0004530.1_g000003 Rmu_sc0005209.1_g000005 Rmu_sc0014282.1_g000003 Rmu_sc0014282.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00241630 Rroxscaffold_3G00241660 Rroxscaffold_3G00241680 |
| rosa_rugosa | Rorug07G0171200 Rorug07G0171200 Rorug07G0172200 |
| rosa_samantha | Rh7AG312800 Rh7AG312900 Rh7AG313400 Rh7AG313800 Rh7BG303800 Rh7BG304700 Rh7CG331300 Rh7CG331400 Rh7CG331700 Rh7DG311500 Rh7DG311800 Rh7DG311900 Rh7DG312300 Rh7DG312500 |
| rosa_wichuraiana | Rw0G017270 Rw7G026490 Rw7G026500 Rw7G026570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 328 |
| AccI | GTMKAC | 1 cut(s) | 199 |
| AciI | CCGC | 2 cut(s) | 213, 318 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 328 |
| AgsI | TTSAA | 1 cut(s) | 302 |
| AluBI | AGCT | 3 cut(s) | 28, 208, 334 |
| AluI | AGCT | 3 cut(s) | 28, 208, 334 |
| Alw21I | GWGCWC | 1 cut(s) | 210 |
| Ama87I | CYCGRG | 1 cut(s) | 81 |
| AvaI | CYCGRG | 1 cut(s) | 81 |
| BanII | GRGCYC | 2 cut(s) | 210, 250 |
| BbsI | GAAGAC | 2 cut(s) | 81, 136 |
| Bbv12I | GWGCWC | 1 cut(s) | 210 |
| BccI | CCATC | 2 cut(s) | 154, 236 |
| BmeT110I | CYCGRG | 1 cut(s) | 81 |
| BmiI | GGNNCC | 1 cut(s) | 247 |
| BpiI | GAAGAC | 2 cut(s) | 81, 136 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| BsaBI | GATNNNNATC | 1 cut(s) | 270 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 328 |
| Bse118I | RCCGGY | 1 cut(s) | 104 |
| Bse1I | ACTGG | 1 cut(s) | 207 |
| Bse8I | GATNNNNATC | 1 cut(s) | 270 |
| BseJI | GATNNNNATC | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 328 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseNI | ACTGG | 1 cut(s) | 207 |
| BsiHKAI | GWGCWC | 1 cut(s) | 210 |
| BsiHKCI | CYCGRG | 1 cut(s) | 81 |
| BsiSI | CCGG | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 328 |
| BsoBI | CYCGRG | 1 cut(s) | 81 |
| Bsp1286I | GDGCHC | 2 cut(s) | 210, 250 |
| Bsp143I | GATC | 3 cut(s) | 139, 271, 340 |
| BspACI | CCGC | 2 cut(s) | 213, 318 |
| BspCNI | CTCAG | 1 cut(s) | 83 |
| BspLI | GGNNCC | 1 cut(s) | 247 |
| BsrFI | RCCGGY | 1 cut(s) | 104 |
| BsrI | ACTGG | 1 cut(s) | 207 |
| BssAI | RCCGGY | 1 cut(s) | 104 |
| BssMI | GATC | 3 cut(s) | 139, 271, 340 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| Bst6I | CTCTTC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 2 cut(s) | 70, 251 |
| BstKTI | GATC | 3 cut(s) | 142, 274, 343 |
| BstMBI | GATC | 3 cut(s) | 139, 271, 340 |
| BstV2I | GAAGAC | 2 cut(s) | 81, 136 |
| BtsIMutI | CAGTG | 1 cut(s) | 142 |
| Cfr10I | RCCGGY | 1 cut(s) | 104 |
| CviAII | CATG | 1 cut(s) | 328 |
| CviJI | RGCY | 6 cut(s) | 28, 104, 167, 208, 248, 334 |
| CviKI_1 | RGCY | 6 cut(s) | 28, 104, 167, 208, 248, 334 |
| DdeI | CTNAG | 2 cut(s) | 70, 251 |
| DpnI | GATC | 3 cut(s) | 141, 273, 342 |
| DpnII | GATC | 3 cut(s) | 139, 271, 340 |
| Eam1104I | CTCTTC | 1 cut(s) | 194 |
| EarI | CTCTTC | 1 cut(s) | 194 |
| EciI | GGCGGA | 2 cut(s) | 202, 307 |
| Ecl136II | GAGCTC | 1 cut(s) | 208 |
| Eco24I | GRGCYC | 2 cut(s) | 210, 250 |
| Eco53kI | GAGCTC | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 1 cut(s) | 81 |
| EcoICRI | GAGCTC | 1 cut(s) | 208 |
| EcoT38I | GRGCYC | 2 cut(s) | 210, 250 |
| FaeI | CATG | 1 cut(s) | 331 |
| FaiI | YATR | 2 cut(s) | 95, 329 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| FatI | CATG | 1 cut(s) | 327 |
| FblI | GTMKAC | 1 cut(s) | 199 |
| FriOI | GRGCYC | 2 cut(s) | 210, 250 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HapII | CCGG | 1 cut(s) | 105 |
| Hin1II | CATG | 1 cut(s) | 331 |
| HinfI | GANTC | 3 cut(s) | 68, 77, 196 |
| HpaII | CCGG | 1 cut(s) | 105 |
| Hpy166II | GTNNAC | 1 cut(s) | 200 |
| Hpy188I | TCNGA | 4 cut(s) | 67, 73, 144, 340 |
| Hpy188III | TCNNGA | 2 cut(s) | 81, 193 |
| Hpy8I | GTNNAC | 1 cut(s) | 200 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 1 cut(s) | 150 |
| HpyF3I | CTNAG | 2 cut(s) | 70, 251 |
| Hsp92II | CATG | 1 cut(s) | 331 |
| Kzo9I | GATC | 3 cut(s) | 139, 271, 340 |
| LmnI | GCTCC | 4 cut(s) | 41, 205, 245, 331 |
| LpnPI | CCDG | 4 cut(s) | 118, 188, 206, 319 |
| MalI | GATC | 3 cut(s) | 141, 273, 342 |
| MboI | GATC | 3 cut(s) | 139, 271, 340 |
| MboII | GAAGA | 6 cut(s) | 34, 86, 141, 181, 278, 281 |
| MhlI | GDGCHC | 2 cut(s) | 210, 250 |
| MluCI | AATT | 2 cut(s) | 169, 376 |
| MlyI | GAGTC | 3 cut(s) | 62, 71, 205 |
| MmeI | TCCRAC | 1 cut(s) | 106 |
| MnlI | CCTC | 2 cut(s) | 67, 325 |
| MspI | CCGG | 1 cut(s) | 105 |
| NdeII | GATC | 3 cut(s) | 139, 271, 340 |
| NlaIII | CATG | 1 cut(s) | 331 |
| NlaIV | GGNNCC | 1 cut(s) | 247 |
| NmeAIII | GCCGAG | 1 cut(s) | 241 |
| PaeR7I | CTCGAG | 1 cut(s) | 81 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 328 |
| PleI | GAGTC | 3 cut(s) | 62, 71, 204 |
| PpsI | GAGTC | 3 cut(s) | 62, 71, 204 |
| Psp124BI | GAGCTC | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 247 |
| SacI | GAGCTC | 1 cut(s) | 210 |
| Sau3AI | GATC | 3 cut(s) | 139, 271, 340 |
| SchI | GAGTC | 3 cut(s) | 62, 71, 205 |
| SduI | GDGCHC | 2 cut(s) | 210, 250 |
| SetI | ASST | 4 cut(s) | 30, 177, 210, 336 |
| Sfr274I | CTCGAG | 1 cut(s) | 81 |
| SlaI | CTCGAG | 1 cut(s) | 81 |
| SmlI | CTYRAG | 1 cut(s) | 81 |
| SmoI | CTYRAG | 1 cut(s) | 81 |
| Sse9I | AATT | 2 cut(s) | 169, 376 |
| SsiI | CCGC | 2 cut(s) | 213, 318 |
| SstI | GAGCTC | 1 cut(s) | 210 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaqI | TCGA | 2 cut(s) | 82, 270 |
| TasI | AATT | 2 cut(s) | 169, 376 |
| TscAI | CASTG | 1 cut(s) | 142 |
| TspDTI | ATGAA | 1 cut(s) | 281 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| TspRI | CASTG | 1 cut(s) | 142 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 328 |
| XhoI | CTCGAG | 1 cut(s) | 81 |
| XmiI | GTMKAC | 1 cut(s) | 199 |