Rmu_sc0005356.1_g000009
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005356.1
Physical Location & Seq
Reverse (-)
35200 .. 35574
375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005356.1_g000009.1.cds

Sequence Viewer

Length: 375 bp
atgtcatacaatcctctcatcactggggtaattccttccagtgggcaattggcaacatttgagaagcagtcctaccttggtgaccccctcctcatccttccaaaatttattgacaattccacagataatgagggtatccttctgagatttattgacaactccacagagcatgaggatgaggttataagacatggattgtacatcagcatgggacttggatttgtggttggattttggggagtttgtgggagcttgattttcatcaggtcatggagatactcatactatggtttcttgaatcttctacatgactggctttatgtgagggtggctttgatcaggcagaaactaaaggacatgcttagaagatcataa

Protein Analysis

124

Amino Acids

14.32

Weight (kDa)

6.82

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 185
AcsI RAATTY 1 cut(s) 104
AfaI GTAC 1 cut(s) 200
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 1 cut(s) 298
AluBI AGCT 1 cut(s) 252
AluI AGCT 1 cut(s) 252
ApoI RAATTY 1 cut(s) 104
AsuHPI GGTGA 1 cut(s) 92
BarI GAAGNNNNNNTAC 2 cut(s) 56, 88
BciVI GTATCC 1 cut(s) 146
BclI TGATCA 1 cut(s) 336
BfuI GTATCC 1 cut(s) 146
BmrI ACTGGG 1 cut(s) 33
BmuI ACTGGG 1 cut(s) 33
BsaBI GATNNNNATC 1 cut(s) 260
BsaJI CCNNGG 1 cut(s) 76
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse1I ACTGG 3 cut(s) 28, 39, 317
Bse8I GATNNNNATC 1 cut(s) 260
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 2 cut(s) 93, 181
BseJI GATNNNNATC 1 cut(s) 260
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 3 cut(s) 28, 39, 317
BseRI GAGGAG 1 cut(s) 80
BslFI GGGAC 1 cut(s) 225
BslI CCNNNNNNNGG 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 225
Bsp1407I TGTACA 1 cut(s) 198
Bsp143I GATC 2 cut(s) 336, 368
BspCNI CTCAG 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 198
BsrI ACTGG 3 cut(s) 28, 39, 317
BssECI CCNNGG 1 cut(s) 76
BssMI GATC 2 cut(s) 336, 368
BssT1I CCWWGG 1 cut(s) 76
BstAUI TGTACA 1 cut(s) 198
BstDEI CTNAG 2 cut(s) 143, 362
BstEII GGTNACC 1 cut(s) 80
BstF5I GGATG 2 cut(s) 93, 181
BstKTI GATC 2 cut(s) 339, 371
BstMBI GATC 2 cut(s) 336, 368
BstNSI RCATGY 1 cut(s) 361
BstPI GGTNACC 1 cut(s) 80
BsuI GTATCC 1 cut(s) 146
BtsCI GGATG 2 cut(s) 93, 181
BtsIMutI CAGTG 2 cut(s) 21, 46
Csp6I GTAC 1 cut(s) 199
CviAII CATG 6 cut(s) 170, 191, 208, 270, 308, 358
CviJI RGCY 3 cut(s) 252, 316, 332
CviKI_1 RGCY 3 cut(s) 252, 316, 332
CviQI GTAC 1 cut(s) 199
DdeI CTNAG 2 cut(s) 143, 362
DpnI GATC 2 cut(s) 338, 370
DpnII GATC 2 cut(s) 336, 368
Eco130I CCWWGG 1 cut(s) 76
Eco91I GGTNACC 1 cut(s) 80
EcoO65I GGTNACC 1 cut(s) 80
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 6 cut(s) 173, 194, 211, 273, 311, 361
FaqI GGGAC 1 cut(s) 225
FatI CATG 6 cut(s) 169, 190, 207, 269, 307, 357
FbaI TGATCA 1 cut(s) 336
FokI GGATG 2 cut(s) 80, 188
Hin1II CATG 6 cut(s) 173, 194, 211, 273, 311, 361
HinfI GANTC 1 cut(s) 298
HphI GGTGA 1 cut(s) 92
Hpy188I TCNGA 1 cut(s) 144
Hpy188III TCNNGA 1 cut(s) 295
HpyAV CCTTC 3 cut(s) 45, 107, 149
HpyF3I CTNAG 2 cut(s) 143, 362
Hsp92II CATG 6 cut(s) 173, 194, 211, 273, 311, 361
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 2 cut(s) 336, 368
LmnI GCTCC 1 cut(s) 249
LpnPI CCDG 5 cut(s) 9, 52, 250, 298, 325
MaeIII GTNAC 1 cut(s) 80
MalI GATC 2 cut(s) 338, 370
MboI GATC 2 cut(s) 336, 368
MboII GAAGA 1 cut(s) 293
MfeI CAATTG 1 cut(s) 47
MluCI AATT 4 cut(s) 30, 47, 104, 115
MmeI TCCRAC 1 cut(s) 208
MnlI CCTC 7 cut(s) 24, 98, 101, 124, 166, 172, 318
MslI CAYNNNNRTG 2 cut(s) 174, 206
MunI CAATTG 1 cut(s) 47
NdeII GATC 2 cut(s) 336, 368
NlaIII CATG 6 cut(s) 173, 194, 211, 273, 311, 361
NmuCI GTSAC 1 cut(s) 80
NspI RCATGY 1 cut(s) 361
PfeI GAWTC 1 cut(s) 298
PsiI TTATAA 1 cut(s) 185
PspEI GGTNACC 1 cut(s) 80
RsaI GTAC 1 cut(s) 200
RsaNI GTAC 1 cut(s) 199
RseI CAYNNNNRTG 2 cut(s) 174, 206
Sau3AI GATC 2 cut(s) 336, 368
SetI ASST 4 cut(s) 78, 183, 254, 269
SmiMI CAYNNNNRTG 2 cut(s) 174, 206
Sse9I AATT 4 cut(s) 30, 47, 104, 115
StyI CCWWGG 1 cut(s) 76
TasI AATT 4 cut(s) 30, 47, 104, 115
TatI WGTACW 1 cut(s) 198
TfiI GAWTC 1 cut(s) 298
TscAI CASTG 2 cut(s) 28, 46
TseFI GTSAC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 1 cut(s) 250
TspRI CASTG 2 cut(s) 28, 46
XapI RAATTY 1 cut(s) 104
XceI RCATGY 1 cut(s) 361
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.