Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005719.1

Orthogroup ID

OG0003751

Physical Location & Seq

Genomic Coordinates Reverse (-)

14469 .. 19373

Gene Structure 4905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atggacgacgacttcgacatggcagcgcccggcggcgagatgatggacgactttgacctccccgacgagggccccgttctcaaggttggcgaggagaaggagatcggaaagcagggcttgaagaagaagctcctcaaggaaggtgaagactgggaaacgcccaagagcggcgacgaggttgaagtacactacactgggactttgctggacgggactcagttcgattcgagccgcgatagggggacgccgttcaagttcactctcggtcaaggacaagtgattaaaggatgggatgaaggtattaaaacaatgaagaaaggtgagaatgcccttttcaccattcctcctgatatggcttatggtgcgtctggatctcccccaaccatccctccaaatgcaacgttgcagttcgatgttgaattgctatcgtggaccagtgtaaacgacataaccaaggatggtggaattattaagaaggttttgaaagagggagaaaaatgggagaacccaaaagaccttgatgaagtcatagttaaatttgaggcccagctcgaagataaaacacttgtagcaaaatctgacaccgtggaattcactgtcaaagagggttacttctgtcctgcattggcaaaggcagttaaaacaatgaagaagagcgaaaaagtattgttgacggtgaaaccacaatatggatttggggacaagggtaagcctgcatctggtgatgagggtgctgttcctccaaatgcaactcttcatattactctagagttggtatcgtggagaacagtctcagaactgacagatgacaagaaagttacgaagaagatcctaaaagaaggggaagggtatgagcgtccaaatgaaggagctgttgttacagtgaaattgattggaaagttgcaagatggtaaggaatttttaaagaaaggtcatggtgaaggagaagaaccatttgagttcaagacagatgaggagcaagtcattgagggacttgatagagctgtagtgacaatgaagaagggtgagatagctcttgtgattatagcccctgagtatggatttggctcatcagagtcccagcaggagttggcagtggtgcctcctaattccaccctctattatgaggtcgagcttgtatcttttgtcaaggacaaggaatcatgggacatgaatactccggagaaaattgaggctgctggtaagaagaaggaagaagggaatgcattctttaaggctggtaaatatgaaaaagcatccaagagatatgagaaggctgtgaagtacatcgagtatgattcagcttttgctgacgaggagaaaaaacaggctaaggtgttgaaggttgcttgcaatctcaatgatgctgcttgcaaattgaagctgaaagagtacaaacaggctgaaaagctgtgtaccaaggtgttggagcttgagggtaagaatgtaaaggccctgtacagaagagctcaggcatatatccagctggctgatttggatttggctgagcttgacatcaagaaagctcttgaaatagaccctaacaacagggatgtgaagctggagtacaaaactttgaaggagaagatgaaagaactcaataaaaaggaggcaaagttctatggcaacatgtttgctaaactgactaaaaattccaataaggatgctgaaccagctgctgctgccgcttcccctccctccggcggtcgcccggtccatagcatcctcagcgccggcagaaaggagatccccgacgctcaagccgcgcaccctctattgcagatcccaacgcagccgacccgaaatccacccacaggcaagatcggtgaagcgaggctcgtccaatccagcagaaaagcaccatcgccgatccgcttcttggcagacccagatgagcaccaccctccggcgcgcaacaagtcttctacgattggagtcccaccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0006457 GO:0006464 GO:0006807 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010286 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0033554 GO:0034605 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051716 GO:0061077 GO:0070370 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_8

Protein Analysis

648

Amino Acids

71.62

Weight (kDa)

5.7

Isoelectric Point (pI)

30.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	52 - 142	1.2e-38	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	168 - 259	2.3e-16	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	284 - 380	8.4e-24	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_19	PF14559	460 - 520	8e-06	Tetratricopeptide repeat
TPR_1	PF00515	483 - 516	5.1e-07	Tetratricopeptide repeat
TPR_8	PF13181	484 - 516	6.1e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25230 AT3G25230
fragaria_vesca	FvH4_2g18150 FvH4_2g18150 FvH4_2g18150
malus_domestica	MD05G1166200.v1.1 MD10G1156300.v1.1
prunus_persica	Prupe.8G194100_v2.0.a1
pyrus_communis	pycom05g15490 pycom10g13450
rosa_chinensis	RchiOBHm_Chr6g0283541 RchiOBHm_Chr7g0204881
rosa_laevigata	RLG00000003424 RLG00000012818
rosa_multiflora	Rmu_sc0005719.1_g000005 Rmu_sc0007194.1_g000004 Rmu_sc0031409.1_g000001 Rmu_sc0031410.1_g000001
rosa_roxburghii	Rroxscaffold_3G00252700 Rroxscaffold_7G00185450
rosa_rugosa	Rorug06G0155300 Rorug06G0155400 Rorug06G0155500 Rorug06G0155600 Rorug07G0086300
rosa_samantha	Rh6AG267500 Rh6BG174200 Rh6BG270000 Rh6DG263400 Rh7AG217000 Rh7CG230200 Rh7DG224600
rosa_wichuraiana	Rw6G023160 Rw7G018810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1099
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccBSI	CCGCTC	1 cut(s)	168
AccII	CGCG	3 cut(s)	234, 1766, 1912
AccIII	TCCGGA	1 cut(s)	1180
AciI	CCGC	7 cut(s)	33, 168, 232, 1686, 1704, 1764, 1873
AclI	AACGTT	1 cut(s)	401
AclWI	GGATC	5 cut(s)	379, 823, 1741, 1777, 1864
AcsI	RAATTY	4 cut(s)	536, 590, 917, 1651
AcyI	GRCGYC	1 cut(s)	245
AfaI	GTAC	6 cut(s)	186, 1286, 1394, 1417, 1460, 1568
AflIII	ACRYGT	1 cut(s)	1629
AloI	GAACNNNNNNTCC	2 cut(s)	1601, 1633
Alw21I	GWGCWC	2 cut(s)	1471, 1899
Alw26I	GTCTC	1 cut(s)	796
AlwI	GGATC	5 cut(s)	379, 823, 1741, 1777, 1864
AlwNI	CAGNNNCTG	1 cut(s)	1679
Aor13HI	TCCGGA	1 cut(s)	1180
AoxI	GGCC	3 cut(s)	70, 543, 1452
ApaI	GGGCCC	1 cut(s)	74
ApeKI	GCWGC	7 cut(s)	23, 1196, 1367, 1676, 1679, 1682, 1792
ApoI	RAATTY	4 cut(s)	536, 590, 917, 1651
ArsI	GACNNNNNNTTYG	1 cut(s)	28
Asp700I	GAANNNNTTC	1 cut(s)	1226
AspLEI	GCGC	5 cut(s)	28, 1733, 1768, 1912, 1914
AspS9I	GGNCC	6 cut(s)	70, 71, 432, 544, 1453, 1714
AsuC2I	CCSGG	2 cut(s)	30, 1712
AsuHPI	GGTGA	8 cut(s)	155, 328, 332, 688, 734, 950, 1037, 1838
AvaII	GGWCC	2 cut(s)	432, 1714
BaeGI	GKGCMC	1 cut(s)	74
BanI	GGYRCC	1 cut(s)	1099
BanII	GRGCYC	2 cut(s)	74, 1471
BarI	GAAGNNNNNNTAC	2 cut(s)	1550, 1582
BbsI	GAAGAC	2 cut(s)	153, 1914
Bbv12I	GWGCWC	2 cut(s)	1471, 1899
BbvCI	CCTCAGC	1 cut(s)	1727
BbvI	GCAGC	7 cut(s)	35, 1183, 1354, 1663, 1666, 1669, 1804
BccI	CCATC	6 cut(s)	37, 282, 392, 452, 902, 1870
BceAI	ACGGC	1 cut(s)	232
BcnI	CCSGG	2 cut(s)	30, 1712
BcoDI	GTCTC	1 cut(s)	796
BfaI	CTAG	1 cut(s)	767
BfmI	CTRYAG	1 cut(s)	1005
BfoI	RGCGCY	2 cut(s)	29, 1734
BlpI	GCTNAGC	1 cut(s)	1506
Bme1390I	CCNGG	2 cut(s)	30, 1712
Bme18I	GGWCC	2 cut(s)	432, 1714
BmgT120I	GGNCC	6 cut(s)	70, 71, 432, 544, 1453, 1714
BmiI	GGNNCC	3 cut(s)	72, 73, 1101
BmrFI	CCNGG	2 cut(s)	30, 1712
BmrI	ACTGGG	2 cut(s)	160, 204
BmsI	GCATC	5 cut(s)	725, 1265, 1354, 1654, 1731
BmuI	ACTGGG	2 cut(s)	160, 204
BpiI	GAAGAC	2 cut(s)	153, 1914
BpmI	CTGGAG	1 cut(s)	1583
Bpu10I	CCTNAGC	3 cut(s)	1332, 1470, 1727
Bpu1102I	GCTNAGC	1 cut(s)	1506
BpuEI	CTTGAG	4 cut(s)	65, 119, 1454, 1743
BpuMI	CCSGG	2 cut(s)	30, 1712
BsaHI	GRCGYC	1 cut(s)	245
BsaJI	CCNNGG	3 cut(s)	453, 585, 1419
BsaWI	WCCGGW	1 cut(s)	1180
BsaXI	ACNNNNNCTCC	8 cut(s)	328, 358, 373, 403, 861, 891, 1601, 1631
Bse118I	RCCGGY	1 cut(s)	1733
Bse1I	ACTGG	3 cut(s)	155, 199, 435
BseAI	TCCGGA	1 cut(s)	1180
BseDI	CCNNGG	3 cut(s)	453, 585, 1419
BseGI	GGATG	8 cut(s)	293, 298, 384, 463, 1256, 1558, 1669, 1722
BseMII	CTCAG	6 cut(s)	230, 807, 1044, 1484, 1497, 1741
BseNI	ACTGG	3 cut(s)	155, 199, 435
BsePI	GCGCGC	1 cut(s)	1910
BseRI	GAGGAG	4 cut(s)	107, 122, 989, 1331
BseSI	GKGCMC	1 cut(s)	74
BseXI	GCAGC	7 cut(s)	35, 1183, 1354, 1663, 1666, 1669, 1804
BseYI	CCCAGC	2 cut(s)	546, 1080
Bsh1236I	CGCG	3 cut(s)	234, 1766, 1912
Bsh1285I	CGRYCG	1 cut(s)	1708
BshFI	GGCC	3 cut(s)	72, 545, 1454
BshNI	GGYRCC	1 cut(s)	1099
BsiEI	CGRYCG	1 cut(s)	1708
BsiHKAI	GWGCWC	2 cut(s)	1471, 1899
BsiSI	CCGG	6 cut(s)	30, 1181, 1701, 1712, 1734, 1907
BslFI	GGGAC	8 cut(s)	211, 226, 256, 713, 1005, 1063, 1181, 1922
BsmAI	GTCTC	1 cut(s)	796
BsmFI	GGGAC	8 cut(s)	211, 226, 256, 713, 1005, 1063, 1181, 1922
BsmI	GAATGC	3 cut(s)	331, 1226, 1228
BsnI	GGCC	3 cut(s)	72, 545, 1454
Bsp120I	GGGCCC	1 cut(s)	70
Bsp1286I	GDGCHC	3 cut(s)	74, 1471, 1899
Bsp13I	TCCGGA	1 cut(s)	1180
Bsp1407I	TGTACA	1 cut(s)	1458
Bsp143I	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
Bsp1720I	GCTNAGC	1 cut(s)	1506
BspACI	CCGC	7 cut(s)	33, 168, 232, 1686, 1704, 1764, 1873
BspANI	GGCC	3 cut(s)	72, 545, 1454
BspCNI	CTCAG	6 cut(s)	229, 806, 1045, 1483, 1498, 1740
BspEI	TCCGGA	1 cut(s)	1180
BspFNI	CGCG	3 cut(s)	234, 1766, 1912
BspLI	GGNNCC	3 cut(s)	72, 73, 1101
BspPI	GGATC	5 cut(s)	379, 823, 1741, 1777, 1864
BspQI	GCTCTTC	2 cut(s)	647, 1459
BspT107I	GGYRCC	1 cut(s)	1099
BsrBI	CCGCTC	1 cut(s)	168
BsrFI	RCCGGY	1 cut(s)	1733
BsrGI	TGTACA	1 cut(s)	1458
BsrI	ACTGG	3 cut(s)	155, 199, 435
BssAI	RCCGGY	1 cut(s)	1733
BssECI	CCNNGG	3 cut(s)	453, 585, 1419
BssHII	GCGCGC	1 cut(s)	1910
BssMI	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
BssNI	GRCGYC	1 cut(s)	245
BssT1I	CCWWGG	2 cut(s)	453, 1419
Bst4CI	ACNGT	5 cut(s)	586, 598, 676, 790, 883
Bst6I	CTCTTC	3 cut(s)	647, 759, 1459
BstACI	GRCGYC	1 cut(s)	245
BstAUI	TGTACA	1 cut(s)	1458
BstC8I	GCNNGC	6 cut(s)	714, 1351, 1372, 1488, 1735, 1912
BstDEI	CTNAG	7 cut(s)	216, 793, 1053, 1332, 1470, 1506, 1727
BstDSI	CCRYGG	1 cut(s)	585
BstF5I	GGATG	8 cut(s)	293, 298, 384, 463, 1256, 1558, 1669, 1722
BstFNI	CGCG	3 cut(s)	234, 1766, 1912
BstH2I	RGCGCY	2 cut(s)	29, 1734
BstHHI	GCGC	5 cut(s)	28, 1733, 1768, 1912, 1914
BstKTI	GATC	7 cut(s)	105, 374, 831, 1749, 1785, 1824, 1872
BstMAI	GTCTC	1 cut(s)	796
BstMBI	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
BstMCI	CGRYCG	1 cut(s)	1708
BstMWI	GCNNNNNNNGC	6 cut(s)	362, 1673, 1682, 1685, 1728, 1763
BstNSI	RCATGY	1 cut(s)	1633
BstSCI	CCNGG	2 cut(s)	28, 1710
BstSFI	CTRYAG	1 cut(s)	1005
BstSLI	GKGCMC	1 cut(s)	74
BstUI	CGCG	3 cut(s)	234, 1766, 1912
BstV1I	GCAGC	7 cut(s)	35, 1183, 1354, 1663, 1666, 1669, 1804
BstV2I	GAAGAC	2 cut(s)	153, 1914
BstX2I	RGATCY	4 cut(s)	371, 828, 1746, 1782
BstXI	CCANNNNNNTGG	1 cut(s)	1426
BstYI	RGATCY	4 cut(s)	371, 828, 1746, 1782
BsuRI	GGCC	3 cut(s)	72, 545, 1454
BtgI	CCRYGG	1 cut(s)	585
BtgZI	GCGATG	1 cut(s)	1848
BtsCI	GGATG	8 cut(s)	293, 298, 384, 463, 1256, 1558, 1669, 1722
BtsI	GCAGTG	1 cut(s)	1101
BtsIMutI	CAGTG	5 cut(s)	192, 442, 594, 888, 1101
Cac8I	GCNNGC	6 cut(s)	714, 1351, 1372, 1488, 1735, 1912
CaiI	CAGNNNCTG	1 cut(s)	1679
CfoI	GCGC	5 cut(s)	28, 1733, 1768, 1912, 1914
Cfr10I	RCCGGY	1 cut(s)	1733
Cfr13I	GGNCC	6 cut(s)	70, 71, 432, 544, 1453, 1714
CseI	GACGC	4 cut(s)	253, 354, 845, 1763
Csp6I	GTAC	6 cut(s)	185, 1285, 1393, 1416, 1459, 1567
CspCI	CAANNNNNGTGG	2 cut(s)	442, 477
CviAII	CATG	5 cut(s)	19, 935, 1164, 1171, 1630
CviQI	GTAC	6 cut(s)	185, 1285, 1393, 1416, 1459, 1567
DdeI	CTNAG	7 cut(s)	216, 793, 1053, 1332, 1470, 1506, 1727
DpnI	GATC	7 cut(s)	104, 373, 830, 1748, 1784, 1823, 1871
DpnII	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
DraI	TTTAAA	1 cut(s)	924
Eam1104I	CTCTTC	3 cut(s)	647, 759, 1459
EarI	CTCTTC	3 cut(s)	647, 759, 1459
Ecl136II	GAGCTC	1 cut(s)	1469
Eco130I	CCWWGG	2 cut(s)	453, 1419
Eco24I	GRGCYC	2 cut(s)	74, 1471
Eco47I	GGWCC	2 cut(s)	432, 1714
Eco53kI	GAGCTC	1 cut(s)	1469
EcoICRI	GAGCTC	1 cut(s)	1469
EcoO109I	RGGNCCY	3 cut(s)	70, 71, 1453
EcoRI	GAATTC	1 cut(s)	590
EcoT14I	CCWWGG	2 cut(s)	453, 1419
EcoT22I	ATGCAT	1 cut(s)	1228
EcoT38I	GRGCYC	2 cut(s)	74, 1471
ErhI	CCWWGG	2 cut(s)	453, 1419
FaeI	CATG	5 cut(s)	22, 938, 1167, 1174, 1633
FalI	AAGNNNNNCTT	2 cut(s)	101, 133
FaqI	GGGAC	8 cut(s)	211, 226, 256, 713, 1005, 1063, 1181, 1922
FatI	CATG	5 cut(s)	18, 934, 1163, 1170, 1629
FokI	GGATG	8 cut(s)	300, 305, 371, 470, 1243, 1565, 1676, 1709
FriOI	GRGCYC	2 cut(s)	74, 1471
FspBI	CTAG	1 cut(s)	767
GlaI	GCGC	5 cut(s)	27, 1732, 1767, 1911, 1913
GsaI	CCCAGC	2 cut(s)	550, 1084
GsuI	CTGGAG	1 cut(s)	1583
HaeII	RGCGCY	2 cut(s)	29, 1734
HaeIII	GGCC	3 cut(s)	72, 545, 1454
HapII	CCGG	6 cut(s)	30, 1181, 1701, 1712, 1734, 1907
HgaI	GACGC	4 cut(s)	253, 354, 845, 1763
HhaI	GCGC	5 cut(s)	28, 1733, 1768, 1912, 1914
Hin1I	GRCGYC	1 cut(s)	245
Hin1II	CATG	5 cut(s)	22, 938, 1167, 1174, 1633
Hin6I	GCGC	5 cut(s)	26, 1731, 1766, 1910, 1912
HinP1I	GCGC	5 cut(s)	26, 1731, 1766, 1910, 1912
HincII	GTYRAC	1 cut(s)	672
HindII	GTYRAC	1 cut(s)	672
HinfI	GANTC	6 cut(s)	214, 224, 1076, 1160, 1298, 1935
HpaII	CCGG	6 cut(s)	30, 1181, 1701, 1712, 1734, 1907
HphI	GGTGA	8 cut(s)	155, 328, 332, 688, 734, 950, 1037, 1838
Hpy166II	GTNNAC	6 cut(s)	187, 258, 432, 442, 672, 1416
Hpy188I	TCNGA	4 cut(s)	107, 580, 796, 1075
Hpy188III	TCNNGA	7 cut(s)	347, 369, 767, 964, 1181, 1519, 1529
Hpy8I	GTNNAC	6 cut(s)	187, 258, 432, 442, 672, 1416
Hpy99I	CGWCG	4 cut(s)	11, 68, 176, 1757
HpyCH4III	ACNGT	5 cut(s)	586, 598, 676, 790, 883
HpyCH4IV	ACGT	1 cut(s)	401
HpyF10VI	GCNNNNNNNGC	6 cut(s)	362, 1673, 1682, 1685, 1728, 1763
HpyF3I	CTNAG	7 cut(s)	216, 793, 1053, 1332, 1470, 1506, 1727
HpySE526I	ACGT	1 cut(s)	401
Hsp92I	GRCGYC	1 cut(s)	245
Hsp92II	CATG	5 cut(s)	22, 938, 1167, 1174, 1633
HspAI	GCGC	5 cut(s)	26, 1731, 1766, 1910, 1912
Kpn2I	TCCGGA	1 cut(s)	1180
KroI	GCCGGC	1 cut(s)	1733
KroNI	GCCGGC	1 cut(s)	1735
Kzo9I	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
LguI	GCTCTTC	2 cut(s)	647, 1459
LmnI	GCTCC	4 cut(s)	135, 869, 976, 1429
Lsp1109I	GCAGC	7 cut(s)	35, 1183, 1354, 1663, 1666, 1669, 1804
LweI	GCATC	5 cut(s)	725, 1265, 1354, 1654, 1731
MaeI	CTAG	1 cut(s)	767
MaeII	ACGT	1 cut(s)	401
MaeIII	GTNAC	4 cut(s)	608, 817, 877, 1009
MalI	GATC	7 cut(s)	104, 373, 830, 1748, 1784, 1823, 1871
MbiI	CCGCTC	1 cut(s)	168
MboI	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
MflI	RGATCY	4 cut(s)	371, 828, 1746, 1782
MhlI	GDGCHC	3 cut(s)	74, 1471, 1899
MlyI	GAGTC	3 cut(s)	208, 1085, 1944
MmeI	TCCRAC	1 cut(s)	1407
Mph1103I	ATGCAT	1 cut(s)	1228
MroI	TCCGGA	1 cut(s)	1180
MroNI	GCCGGC	1 cut(s)	1733
MroXI	GAANNNNTTC	1 cut(s)	1226
MseI	TTAA	7 cut(s)	282, 303, 471, 534, 639, 923, 1233
MspA1I	CMGCKG	2 cut(s)	1486, 1676
MspI	CCGG	6 cut(s)	30, 1181, 1701, 1712, 1734, 1907
MspR9I	CCNGG	2 cut(s)	30, 1712
Mva1269I	GAATGC	3 cut(s)	331, 1226, 1228
MvnI	CGCG	3 cut(s)	234, 1766, 1912
MwoI	GCNNNNNNNGC	6 cut(s)	362, 1673, 1682, 1685, 1728, 1763
NaeI	GCCGGC	1 cut(s)	1735
NciI	CCSGG	2 cut(s)	30, 1712
NdeII	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
NgoMIV	GCCGGC	1 cut(s)	1733
NlaIII	CATG	5 cut(s)	22, 938, 1167, 1174, 1633
NlaIV	GGNNCC	3 cut(s)	72, 73, 1101
NmuCI	GTSAC	1 cut(s)	1009
NsiI	ATGCAT	1 cut(s)	1228
NspI	RCATGY	1 cut(s)	1633
PauI	GCGCGC	1 cut(s)	1910
PciI	ACATGT	1 cut(s)	1629
PciSI	GCTCTTC	2 cut(s)	647, 1459
PcsI	WCGNNNNNNNCGW	2 cut(s)	12, 72
PctI	GAATGC	3 cut(s)	331, 1226, 1228
PdiI	GCCGGC	1 cut(s)	1735
PdmI	GAANNNNTTC	1 cut(s)	1226
PfeI	GAWTC	3 cut(s)	224, 1160, 1298
PflMI	CCANNNNNTGG	1 cut(s)	689
PleI	GAGTC	3 cut(s)	208, 1084, 1943
PpsI	GAGTC	3 cut(s)	208, 1084, 1943
PscI	ACATGT	1 cut(s)	1629
Psp124BI	GAGCTC	1 cut(s)	1471
Psp1406I	AACGTT	1 cut(s)	401
PspFI	CCCAGC	2 cut(s)	546, 1080
PspN4I	GGNNCC	3 cut(s)	72, 73, 1101
PspOMI	GGGCCC	1 cut(s)	70
PspPI	GGNCC	6 cut(s)	70, 71, 432, 544, 1453, 1714
PstNI	CAGNNNCTG	1 cut(s)	1679
PsuI	RGATCY	4 cut(s)	371, 828, 1746, 1782
PteI	GCGCGC	1 cut(s)	1910
PvuII	CAGCTG	2 cut(s)	1486, 1676
RsaI	GTAC	6 cut(s)	186, 1286, 1394, 1417, 1460, 1568
RsaNI	GTAC	6 cut(s)	185, 1285, 1393, 1416, 1459, 1567
SacI	GAGCTC	1 cut(s)	1471
SapI	GCTCTTC	2 cut(s)	647, 1459
SaqAI	TTAA	7 cut(s)	282, 303, 471, 534, 639, 923, 1233
Sau3AI	GATC	7 cut(s)	102, 371, 828, 1746, 1782, 1821, 1869
Sau96I	GGNCC	6 cut(s)	70, 71, 432, 544, 1453, 1714
SchI	GAGTC	3 cut(s)	208, 1085, 1944
ScrFI	CCNGG	2 cut(s)	30, 1712
SduI	GDGCHC	3 cut(s)	74, 1471, 1899
SfaNI	GCATC	5 cut(s)	725, 1265, 1354, 1654, 1731
SfcI	CTRYAG	1 cut(s)	1005
SinI	GGWCC	2 cut(s)	432, 1714
SmlI	CTYRAG	4 cut(s)	80, 134, 1433, 1758
SmoI	CTYRAG	4 cut(s)	80, 134, 1433, 1758
SsiI	CCGC	7 cut(s)	33, 168, 232, 1686, 1704, 1764, 1873
SspMI	CTAG	1 cut(s)	767
SstI	GAGCTC	1 cut(s)	1471
StyD4I	CCNGG	2 cut(s)	28, 1710
StyI	CCWWGG	2 cut(s)	453, 1419
TaaI	ACNGT	5 cut(s)	586, 598, 676, 790, 883
TaiI	ACGT	1 cut(s)	404
TaqI	TCGA	7 cut(s)	15, 222, 227, 411, 552, 1131, 1290
TaqII	GACCGA	1 cut(s)	254
TatI	WGTACW	5 cut(s)	184, 1284, 1392, 1458, 1566
TauI	GCSGC	5 cut(s)	36, 171, 234, 1688, 1766
TfiI	GAWTC	3 cut(s)	224, 1160, 1298
Tru1I	TTAA	7 cut(s)	282, 303, 471, 534, 639, 923, 1233
Tru9I	TTAA	7 cut(s)	282, 303, 471, 534, 639, 923, 1233
TscAI	CASTG	5 cut(s)	199, 442, 601, 888, 1101
TseFI	GTSAC	1 cut(s)	1009
TseI	GCWGC	7 cut(s)	23, 1196, 1367, 1676, 1679, 1682, 1792
Tsp45I	GTSAC	1 cut(s)	1009
TspRI	CASTG	5 cut(s)	199, 442, 601, 888, 1101
Van91I	CCANNNNNTGG	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	432, 1714
XapI	RAATTY	4 cut(s)	536, 590, 917, 1651
XbaI	TCTAGA	1 cut(s)	766
XceI	RCATGY	1 cut(s)	1633
XmnI	GAANNNNTTC	1 cut(s)	1226
XspI	CTAG	1 cut(s)	767
Zsp2I	ATGCAT	1 cut(s)	1228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.