Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005828.1

Orthogroup ID

OG0006929

Physical Location & Seq

Genomic Coordinates Forward (+)

34134 .. 38629

Gene Structure 4496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

atgccccagtcggttctggtgctcgagaggcgggagatcctcacaatcgggaccgatatcaagacgctcttcaagccttccagcttaactttgctagagaaggctttccgtgctcaggagattactcttctcaacccaatttggatacattcaagggtttctggcaagccgttttacgcgattttgcataggattgatgttagggttgtcattgatttggagcctactagaatagaggacccgactatgtctatagctggggcggtgcagtctcagaagctggccttgagggtgatttcgcagctgcagtcattgcccggtggggatattaagcatttgtgtgacatggtggtggagggtgtgagggagcttactgggtatgatagagttatggagtacaagtttcatgaggatgagcacggggaggttttggctgaagtgggtgacatcaataaagctacagaacaggatgagagccagcatttggatgcccagatcgagtttctgggtatggggaggaggttgtccagcggagaaggctttgtccagcatggtggccggcggagtgaactttggtcgaaggaagatgtggccggcgaagcggagccttggctagcggtttctcctagaagcggaggacttggtgctcagcggctggagtgcggaagactcgccggcggaagatttgctggcagaagagtagctggcagaaaactcgctagtggacggacttcttggaggaagattgctagctgtagtggaggcgtggtcagcggtggtgctcggcggagcaaagctttggtgaagctcggtggagcaaagctttggctagcggtggtgctcggcgaagcggggctcgttaatggagctttgatcagtggtggtgctcagcggagtggagctttggctagcgctagaggagctttggccggtggaggtgtgccgctgatgatcattgaaaaatggccatgggtgcccagaaaagggtgggttgggtcaccatcgtccaccagtcgacgacctccttggacgctgacccactcgtcaagggccgctgctcttttcctcttttggcccctaacgctcgccatcctccttttcgagtgcgccccttctctgctgctcctctccatcgatctcatcttcggcctcaccaccacattcttctatatccactccttcatctctcgggaagctgcctccatccagacctccgatctacatgccaagtgcaaagaatggatttgttctcggttaccgtttgatctgagctcatggccgacctcgacccgacagctttcggttctcgcagctcaagctgtcgaaacccttctcgattcgaaccctgaaaaccgtggatatgtgggcagatccgaggaggtgaaaattgtggaggaggggttgttcggggagattctaggtggtctgccgaagaagcgggttgggtcggtttgcgaagggtgcgaagaagtgaagaggggaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

495

Amino Acids

53.88

Weight (kDa)

9.05

Isoelectric Point (pI)

55.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAS_2	PF08446	8 - 75	6.2e-18	PAS fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006929)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g19750
malus_domestica	MD17G1116700.v1.1
pyrus_communis	pycom04g16280 pycom10g22360
rosa_chinensis	RchiOBHm_Chr2g0161111
rosa_laevigata	RLG00000013469 RLG00000028069
rosa_multiflora	Rmu_co8348701.1_g000001 Rmu_sc0000206.1_g000004 Rmu_sc0000780.1_g000014 Rmu_sc0004343.1_g000020 Rmu_sc0005828.1_g000007 Rmu_sc0007671.1_g000015 Rmu_sc0011620.1_g000002 Rmu_sc0012237.1_g000002 Rmu_sc0012589.1_g000001
rosa_rugosa	Rorug04G0078700
rosa_samantha	Rh1CG080300 Rh2AG233400 Rh2AG289500 Rh2DG314400 Rh6BG122600 Rh6CG121000 Rh6DG108700 Rh6DG223800 Rh7BG343600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1042
AccB1I	GGYRCC	1 cut(s)	973
AccB7I	CCANNNNNTGG	1 cut(s)	484
AccI	GTMKAC	1 cut(s)	1015
AccII	CGCG	1 cut(s)	179
AclWI	GGATC	2 cut(s)	31, 1365
AcoI	YGGCCR	5 cut(s)	556, 591, 927, 965, 1277
AcuI	CTGAAG	1 cut(s)	456
AfaI	GTAC	1 cut(s)	398
AfeI	AGCGCT	1 cut(s)	913
AfiI	CCNNNNNNNGG	5 cut(s)	115, 484, 632, 983, 984
AgsI	TTSAA	3 cut(s)	73, 153, 959
AloI	GAACNNNNNNTCC	2 cut(s)	1388, 1420
Alw21I	GWGCWC	8 cut(s)	24, 115, 420, 649, 784, 843, 889, 1274
Alw26I	GTCTC	1 cut(s)	276
AlwI	GGATC	2 cut(s)	31, 1365
AlwNI	CAGNNNCTG	2 cut(s)	280, 655
Ama87I	CYCGRG	2 cut(s)	23, 1188
Aor51HI	AGCGCT	1 cut(s)	913
AoxI	GGCC	9 cut(s)	282, 556, 591, 927, 965, 1050, 1073, 1147, 1277
ApeKI	GCWGC	6 cut(s)	301, 304, 1055, 1120, 1196, 1310
Asp700I	GAANNNNTTC	2 cut(s)	104, 1329
AspLEI	GCGC	2 cut(s)	914, 1109
AspS9I	GGNCC	4 cut(s)	51, 238, 1050, 1074
AsuC2I	CCSGG	1 cut(s)	318
AsuHPI	GGTGA	6 cut(s)	304, 455, 814, 990, 1144, 1393
AsuII	TTCGAA	1 cut(s)	1340
AsuNHI	GCTAGC	4 cut(s)	613, 749, 829, 908
AvaI	CYCGRG	2 cut(s)	23, 1188
AvaII	GGWCC	2 cut(s)	51, 238
BaeGI	GKGCMC	1 cut(s)	978
BalI	TGGCCA	1 cut(s)	967
BanI	GGYRCC	1 cut(s)	973
BanII	GRGCYC	2 cut(s)	858, 1274
BbsI	GAAGAC	1 cut(s)	673
Bbv12I	GWGCWC	8 cut(s)	24, 115, 420, 649, 784, 843, 889, 1274
BbvI	GCAGC	6 cut(s)	291, 313, 1042, 1107, 1183, 1322
BccI	CCATC	4 cut(s)	1009, 1097, 1139, 1211
BceAI	ACGGC	1 cut(s)	154
BcgI	CGANNNNNNTGC	4 cut(s)	697, 731, 1205, 1239
BciVI	GTATCC	1 cut(s)	138
BclI	TGATCA	2 cut(s)	873, 951
BcnI	CCSGG	1 cut(s)	318
BcoDI	GTCTC	1 cut(s)	276
BfmI	CTRYAG	4 cut(s)	252, 305, 459, 754
BfoI	RGCGCY	1 cut(s)	915
BfuI	GTATCC	1 cut(s)	138
BisI	GCNGC	9 cut(s)	302, 305, 653, 944, 1053, 1056, 1121, 1197, 1311
BlpI	GCTNAGC	2 cut(s)	648, 888
BlsI	GCNGC	9 cut(s)	303, 306, 654, 945, 1054, 1057, 1122, 1198, 1312
Bme1390I	CCNGG	1 cut(s)	318
Bme18I	GGWCC	2 cut(s)	51, 238
BmeT110I	CYCGRG	2 cut(s)	23, 1188
BmgT120I	GGNCC	4 cut(s)	51, 238, 1050, 1074
BmiI	GGNNCC	6 cut(s)	52, 222, 240, 606, 975, 1076
BmrFI	CCNGG	1 cut(s)	318
BmrI	ACTGGG	1 cut(s)	384
BmsI	GCATC	1 cut(s)	478
BmtI	GCTAGC	4 cut(s)	617, 753, 833, 912
BmuI	ACTGGG	1 cut(s)	384
BpiI	GAAGAC	1 cut(s)	673
BpmI	CTGGAG	1 cut(s)	677
Bpu10I	CCTNAGC	1 cut(s)	114
Bpu1102I	GCTNAGC	2 cut(s)	648, 888
Bpu14I	TTCGAA	1 cut(s)	1340
BpuEI	CTTGAG	2 cut(s)	307, 1299
BpuMI	CCSGG	1 cut(s)	318
Bsa29I	ATCGAT	1 cut(s)	1134
BsaJI	CCNNGG	5 cut(s)	608, 968, 1025, 1354, 1374
BsaXI	ACNNNNNCTCC	8 cut(s)	386, 416, 753, 783, 1385, 1388, 1415, 1418
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 484, 632, 983, 984
Bse118I	RCCGGY	4 cut(s)	558, 593, 674, 929
Bse1I	ACTGG	3 cut(s)	7, 379, 1011
Bse3DI	GCAATG	1 cut(s)	311
BseCI	ATCGAT	1 cut(s)	1134
BseDI	CCNNGG	5 cut(s)	608, 968, 1025, 1354, 1374
BseGI	GGATG	5 cut(s)	418, 475, 493, 1089, 1203
BseLI	CCNNNNNNNGG	5 cut(s)	115, 484, 632, 983, 984
BseMI	GCAATG	1 cut(s)	311
BseMII	CTCAG	5 cut(s)	128, 287, 662, 902, 1259
BseNI	ACTGG	3 cut(s)	7, 379, 1011
BseRI	GAGGAG	5 cut(s)	532, 933, 1115, 1391, 1409
BseSI	GKGCMC	1 cut(s)	978
BseXI	GCAGC	6 cut(s)	291, 313, 1042, 1107, 1183, 1322
BseYI	CCCAGC	1 cut(s)	257
BsgI	GTGCAG	1 cut(s)	287
Bsh1236I	CGCG	1 cut(s)	179
BshFI	GGCC	9 cut(s)	284, 558, 593, 929, 967, 1052, 1075, 1149, 1279
BshNI	GGYRCC	1 cut(s)	973
BshVI	ATCGAT	1 cut(s)	1134
BsiHKAI	GWGCWC	8 cut(s)	24, 115, 420, 649, 784, 843, 889, 1274
BsiHKCI	CYCGRG	2 cut(s)	23, 1188
BsiSI	CCGG	5 cut(s)	318, 559, 594, 675, 930
BslFI	GGGAC	1 cut(s)	64
BslI	CCNNNNNNNGG	5 cut(s)	115, 484, 632, 983, 984
BsmAI	GTCTC	1 cut(s)	276
BsmFI	GGGAC	1 cut(s)	64
BsnI	GGCC	9 cut(s)	284, 558, 593, 929, 967, 1052, 1075, 1149, 1279
BsoBI	CYCGRG	2 cut(s)	23, 1188
Bsp119I	TTCGAA	1 cut(s)	1340
Bsp143I	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
Bsp1720I	GCTNAGC	2 cut(s)	648, 888
Bsp19I	CCATGG	1 cut(s)	968
BspANI	GGCC	9 cut(s)	284, 558, 593, 929, 967, 1052, 1075, 1149, 1279
BspCNI	CTCAG	5 cut(s)	127, 286, 661, 901, 1260
BspDI	ATCGAT	1 cut(s)	1134
BspFNI	CGCG	1 cut(s)	179
BspHI	TCATGA	1 cut(s)	406
BspLI	GGNNCC	6 cut(s)	52, 222, 240, 606, 975, 1076
BspMAI	CTGCAG	1 cut(s)	309
BspOI	GCTAGC	4 cut(s)	617, 753, 833, 912
BspPI	GGATC	2 cut(s)	31, 1365
BspQI	GCTCTTC	1 cut(s)	74
BspT104I	TTCGAA	1 cut(s)	1340
BspT107I	GGYRCC	1 cut(s)	973
BsrDI	GCAATG	1 cut(s)	311
BsrFI	RCCGGY	4 cut(s)	558, 593, 674, 929
BsrI	ACTGG	3 cut(s)	7, 379, 1011
BssAI	RCCGGY	4 cut(s)	558, 593, 674, 929
BssECI	CCNNGG	5 cut(s)	608, 968, 1025, 1354, 1374
BssMI	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
BssT1I	CCWWGG	3 cut(s)	608, 968, 1025
Bst4CI	ACNGT	2 cut(s)	1260, 1355
Bst6I	CTCTTC	4 cut(s)	74, 132, 691, 1469
BstAPI	GCANNNNNTGC	1 cut(s)	313
BstBI	TTCGAA	1 cut(s)	1340
BstDEI	CTNAG	5 cut(s)	114, 273, 648, 888, 1268
BstDSI	CCRYGG	2 cut(s)	968, 1354
BstEII	GGTNACC	2 cut(s)	996, 1254
BstF5I	GGATG	5 cut(s)	418, 475, 493, 1089, 1203
BstFNI	CGCG	1 cut(s)	179
BstH2I	RGCGCY	1 cut(s)	915
BstHHI	GCGC	2 cut(s)	914, 1109
BstKTI	GATC	8 cut(s)	39, 498, 876, 954, 1138, 1219, 1267, 1373
BstMAI	GTCTC	1 cut(s)	276
BstMBI	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
BstNSI	RCATGY	1 cut(s)	1226
BstPI	GGTNACC	2 cut(s)	996, 1254
BstSCI	CCNGG	1 cut(s)	316
BstSFI	CTRYAG	4 cut(s)	252, 305, 459, 754
BstSLI	GKGCMC	1 cut(s)	978
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	6 cut(s)	291, 313, 1042, 1107, 1183, 1322
BstV2I	GAAGAC	1 cut(s)	673
BstX2I	RGATCY	2 cut(s)	36, 1370
BstXI	CCANNNNNNTGG	1 cut(s)	554
BstYI	RGATCY	2 cut(s)	36, 1370
Bsu15I	ATCGAT	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	138
BsuRI	GGCC	9 cut(s)	284, 558, 593, 929, 967, 1052, 1075, 1149, 1279
BsuTUI	ATCGAT	1 cut(s)	1134
BtgI	CCRYGG	2 cut(s)	968, 1354
BtsCI	GGATG	5 cut(s)	418, 475, 493, 1089, 1203
BtsIMutI	CAGTG	1 cut(s)	883
CaiI	CAGNNNCTG	2 cut(s)	280, 655
CciI	TCATGA	1 cut(s)	406
CfoI	GCGC	2 cut(s)	914, 1109
Cfr10I	RCCGGY	4 cut(s)	558, 593, 674, 929
Cfr13I	GGNCC	4 cut(s)	51, 238, 1050, 1074
ClaI	ATCGAT	1 cut(s)	1134
CseI	GACGC	2 cut(s)	73, 1039
Csp6I	GTAC	1 cut(s)	397
CviAII	CATG	6 cut(s)	346, 407, 551, 969, 1223, 1275
CviQI	GTAC	1 cut(s)	397
DdeI	CTNAG	5 cut(s)	114, 273, 648, 888, 1268
DpnI	GATC	8 cut(s)	38, 497, 875, 953, 1137, 1218, 1266, 1372
DpnII	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
DrdI	GACNNNNNNGTC	1 cut(s)	1042
DseDI	GACNNNNNNGTC	1 cut(s)	1042
EaeI	YGGCCR	5 cut(s)	556, 591, 927, 965, 1277
Eam1104I	CTCTTC	4 cut(s)	74, 132, 691, 1469
EarI	CTCTTC	4 cut(s)	74, 132, 691, 1469
EciI	GGCGGA	3 cut(s)	577, 693, 802
Ecl136II	GAGCTC	1 cut(s)	1272
Eco130I	CCWWGG	3 cut(s)	608, 968, 1025
Eco24I	GRGCYC	2 cut(s)	858, 1274
Eco32I	GATATC	1 cut(s)	58
Eco47I	GGWCC	2 cut(s)	51, 238
Eco47III	AGCGCT	1 cut(s)	913
Eco53kI	GAGCTC	1 cut(s)	1272
Eco57I	CTGAAG	1 cut(s)	456
Eco88I	CYCGRG	2 cut(s)	23, 1188
Eco91I	GGTNACC	2 cut(s)	996, 1254
EcoICRI	GAGCTC	1 cut(s)	1272
EcoO109I	RGGNCCY	1 cut(s)	238
EcoO65I	GGTNACC	2 cut(s)	996, 1254
EcoRV	GATATC	1 cut(s)	58
EcoT14I	CCWWGG	3 cut(s)	608, 968, 1025
EcoT38I	GRGCYC	2 cut(s)	858, 1274
ErhI	CCWWGG	3 cut(s)	608, 968, 1025
FaeI	CATG	6 cut(s)	349, 410, 554, 972, 1226, 1278
FalI	AAGNNNNNCTT	4 cut(s)	53, 85, 269, 301
FaqI	GGGAC	1 cut(s)	64
FatI	CATG	6 cut(s)	345, 406, 550, 968, 1222, 1274
FauI	CCCGC	3 cut(s)	24, 844, 1431
FbaI	TGATCA	2 cut(s)	873, 951
FblI	GTMKAC	1 cut(s)	1015
Fnu4HI	GCNGC	9 cut(s)	302, 305, 653, 944, 1053, 1056, 1121, 1197, 1311
FokI	GGATG	5 cut(s)	425, 482, 500, 1076, 1190
FriOI	GRGCYC	2 cut(s)	858, 1274
Fsp4HI	GCNGC	9 cut(s)	302, 305, 653, 944, 1053, 1056, 1121, 1197, 1311
GlaI	GCGC	2 cut(s)	913, 1108
GluI	GCNGC	9 cut(s)	302, 305, 653, 944, 1053, 1056, 1121, 1197, 1311
GsaI	CCCAGC	1 cut(s)	261
GsuI	CTGGAG	1 cut(s)	677
HaeII	RGCGCY	1 cut(s)	915
HaeIII	GGCC	9 cut(s)	284, 558, 593, 929, 967, 1052, 1075, 1149, 1279
HapII	CCGG	5 cut(s)	318, 559, 594, 675, 930
HgaI	GACGC	2 cut(s)	73, 1039
HhaI	GCGC	2 cut(s)	914, 1109
Hin1II	CATG	6 cut(s)	349, 410, 554, 972, 1226, 1278
Hin6I	GCGC	2 cut(s)	912, 1107
HinP1I	GCGC	2 cut(s)	912, 1107
HincII	GTYRAC	1 cut(s)	1016
HindII	GTYRAC	1 cut(s)	1016
HindIII	AAGCTT	2 cut(s)	795, 821
HinfI	GANTC	3 cut(s)	669, 1337, 1414
HpaII	CCGG	5 cut(s)	318, 559, 594, 675, 930
HphI	GGTGA	6 cut(s)	304, 455, 814, 990, 1144, 1393
Hpy166II	GTNNAC	4 cut(s)	569, 725, 1008, 1016
Hpy188I	TCNGA	4 cut(s)	276, 1216, 1269, 1375
Hpy188III	TCNNGA	8 cut(s)	25, 49, 61, 116, 407, 1190, 1207, 1334
Hpy8I	GTNNAC	4 cut(s)	569, 725, 1008, 1016
Hpy99I	CGWCG	1 cut(s)	1020
HpyAV	CCTTC	8 cut(s)	87, 94, 530, 574, 1122, 1189, 1340, 1451
HpyCH4III	ACNGT	2 cut(s)	1260, 1355
HpyCH4V	TGCA	4 cut(s)	187, 268, 307, 1233
HpyF3I	CTNAG	5 cut(s)	114, 273, 648, 888, 1268
Hsp92II	CATG	6 cut(s)	349, 410, 554, 972, 1226, 1278
HspAI	GCGC	2 cut(s)	912, 1107
KroI	GCCGGC	3 cut(s)	558, 593, 674
KroNI	GCCGGC	3 cut(s)	560, 595, 676
Ksp22I	TGATCA	2 cut(s)	873, 951
Kzo9I	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
LguI	GCTCTTC	1 cut(s)	74
LmnI	GCTCC	9 cut(s)	220, 367, 604, 789, 815, 866, 899, 920, 1128
Lsp1109I	GCAGC	6 cut(s)	291, 313, 1042, 1107, 1183, 1322
LweI	GCATC	1 cut(s)	478
MaeIII	GTNAC	4 cut(s)	341, 443, 996, 1254
MalI	GATC	8 cut(s)	38, 497, 875, 953, 1137, 1218, 1266, 1372
MboI	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
MflI	RGATCY	2 cut(s)	36, 1370
MlsI	TGGCCA	1 cut(s)	967
MluCI	AATT	2 cut(s)	138, 1386
MluNI	TGGCCA	1 cut(s)	967
MlyI	GAGTC	1 cut(s)	663
Mox20I	TGGCCA	1 cut(s)	967
MreI	CGCCGGCG	1 cut(s)	674
MroNI	GCCGGC	3 cut(s)	558, 593, 674
MroXI	GAANNNNTTC	2 cut(s)	104, 1329
MscI	TGGCCA	1 cut(s)	967
MseI	TTAA	3 cut(s)	86, 330, 861
MslI	CAYNNNNRTG	4 cut(s)	339, 350, 411, 486
Msp20I	TGGCCA	1 cut(s)	967
MspA1I	CMGCKG	7 cut(s)	304, 531, 652, 774, 892, 946, 1055
MspI	CCGG	5 cut(s)	318, 559, 594, 675, 930
MspR9I	CCNGG	1 cut(s)	318
MvnI	CGCG	1 cut(s)	179
NaeI	GCCGGC	3 cut(s)	560, 595, 676
NciI	CCSGG	1 cut(s)	318
NcoI	CCATGG	1 cut(s)	968
NdeII	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
NgoMIV	GCCGGC	3 cut(s)	558, 593, 674
NheI	GCTAGC	4 cut(s)	613, 749, 829, 908
NlaIII	CATG	6 cut(s)	349, 410, 554, 972, 1226, 1278
NlaIV	GGNNCC	6 cut(s)	52, 222, 240, 606, 975, 1076
NmeAIII	GCCGAG	2 cut(s)	763, 822
NmuCI	GTSAC	3 cut(s)	341, 443, 996
NspI	RCATGY	1 cut(s)	1226
NspV	TTCGAA	1 cut(s)	1340
PaeR7I	CTCGAG	1 cut(s)	23
PagI	TCATGA	1 cut(s)	406
PciSI	GCTCTTC	1 cut(s)	74
PdiI	GCCGGC	3 cut(s)	560, 595, 676
PdmI	GAANNNNTTC	2 cut(s)	104, 1329
PfeI	GAWTC	2 cut(s)	1337, 1414
PflFI	GACNNNGTC	1 cut(s)	247
PflMI	CCANNNNNTGG	1 cut(s)	484
PkrI	GCNGC	9 cut(s)	303, 306, 654, 945, 1054, 1057, 1122, 1198, 1312
PleI	GAGTC	1 cut(s)	663
PpsI	GAGTC	1 cut(s)	663
PpuMI	RGGWCCY	1 cut(s)	238
Psp124BI	GAGCTC	1 cut(s)	1274
Psp5II	RGGWCCY	1 cut(s)	238
PspEI	GGTNACC	2 cut(s)	996, 1254
PspFI	CCCAGC	1 cut(s)	257
PspN4I	GGNNCC	6 cut(s)	52, 222, 240, 606, 975, 1076
PspPI	GGNCC	4 cut(s)	51, 238, 1050, 1074
PspPPI	RGGWCCY	1 cut(s)	238
PstI	CTGCAG	1 cut(s)	309
PstNI	CAGNNNCTG	2 cut(s)	280, 655
PsuI	RGATCY	2 cut(s)	36, 1370
PsyI	GACNNNGTC	1 cut(s)	247
PvuII	CAGCTG	1 cut(s)	304
RsaI	GTAC	1 cut(s)	398
RsaNI	GTAC	1 cut(s)	397
RseI	CAYNNNNRTG	4 cut(s)	339, 350, 411, 486
SacI	GAGCTC	1 cut(s)	1274
SalI	GTCGAC	1 cut(s)	1014
SapI	GCTCTTC	1 cut(s)	74
SaqAI	TTAA	3 cut(s)	86, 330, 861
SatI	GCNGC	9 cut(s)	302, 305, 653, 944, 1053, 1056, 1121, 1197, 1311
Sau3AI	GATC	8 cut(s)	36, 495, 873, 951, 1135, 1216, 1264, 1370
Sau96I	GGNCC	4 cut(s)	51, 238, 1050, 1074
SchI	GAGTC	1 cut(s)	663
ScrFI	CCNGG	1 cut(s)	318
SfaNI	GCATC	1 cut(s)	478
SfcI	CTRYAG	4 cut(s)	252, 305, 459, 754
Sfr274I	CTCGAG	1 cut(s)	23
SfuI	TTCGAA	1 cut(s)	1340
SgrAI	CRCCGGYG	1 cut(s)	674
SinI	GGWCC	2 cut(s)	51, 238
SlaI	CTCGAG	1 cut(s)	23
SmiMI	CAYNNNNRTG	4 cut(s)	339, 350, 411, 486
SmlI	CTYRAG	3 cut(s)	23, 286, 1314
SmoI	CTYRAG	3 cut(s)	23, 286, 1314
Sse9I	AATT	2 cut(s)	138, 1386
SstI	GAGCTC	1 cut(s)	1274
StyD4I	CCNGG	1 cut(s)	316
StyI	CCWWGG	3 cut(s)	608, 968, 1025
TaaI	ACNGT	2 cut(s)	1260, 1355
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	2 cut(s)	138, 1386
TatI	WGTACW	1 cut(s)	396
TauI	GCSGC	3 cut(s)	655, 946, 1055
TfiI	GAWTC	2 cut(s)	1337, 1414
Tru1I	TTAA	3 cut(s)	86, 330, 861
Tru9I	TTAA	3 cut(s)	86, 330, 861
TscAI	CASTG	1 cut(s)	883
TseFI	GTSAC	3 cut(s)	341, 443, 996
TseI	GCWGC	6 cut(s)	301, 304, 1055, 1120, 1196, 1310
Tsp45I	GTSAC	3 cut(s)	341, 443, 996
TspDTI	ATGAA	2 cut(s)	395, 1171
TspGWI	ACGGA	2 cut(s)	98, 742
TspRI	CASTG	1 cut(s)	883
Tth111I	GACNNNGTC	1 cut(s)	247
Van91I	CCANNNNNTGG	1 cut(s)	484
VpaK11BI	GGWCC	2 cut(s)	51, 238
XceI	RCATGY	1 cut(s)	1226
XhoI	CTCGAG	1 cut(s)	23
XmiI	GTMKAC	1 cut(s)	1015
XmnI	GAANNNNTTC	2 cut(s)	104, 1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.