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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47320 AT3G66654 AT3G66654 AT3G66654 AT3G66654 AT3G66654 |
| fragaria_vesca | FvH4_4g19620 FvH4_4g19630 |
| malus_domestica | MD13G1155100.v1.1 MD13G1155200.v1.1 MD16G1154600.v1.1 MD16G1154700.v1.1 |
| prunus_persica | Prupe.1G118100_v2.0.a1 Prupe.1G118100_v2.0.a1 Prupe.1G118200_v2.0.a1 |
| pyrus_communis | pycom13g13190 pycom13g13200 pycom16g13100 pycom16g13110 |
| rosa_chinensis | RchiOBHm_Chr4g0424881 RchiOBHm_Chr4g0424891 |
| rosa_laevigata | RLG00000007412 |
| rosa_multiflora | Rmu_co8066912.1_g000001 Rmu_sc0006754.1_g000003 Rmu_sc0033998.1_g000001 |
| rosa_rugosa | Rorug04G0200300 Rorug04G0200400 |
| rosa_samantha | Rh4AG257700 Rh4AG257800 Rh4BG263100 Rh4BG263200 Rh4CG274100 Rh4CG274200 Rh4DG258800 Rh4DG258900 |
| rosa_wichuraiana | Rw4G022240 Rw4G022250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 1237, 1484, 2374 |
| AccBSI | CCGCTC | 1 cut(s) | 1418 |
| AccII | CGCG | 3 cut(s) | 474, 1235, 1265 |
| AclWI | GGATC | 8 cut(s) | 477, 1188, 1374, 1887, 2001, 2507, 2841, 2932 |
| AcoI | YGGCCR | 4 cut(s) | 15, 637, 1266, 3010 |
| AcsI | RAATTY | 5 cut(s) | 219, 227, 461, 787, 2871 |
| AcuI | CTGAAG | 4 cut(s) | 507, 1736, 2170, 2268 |
| AcyI | GRCGYC | 2 cut(s) | 1238, 1384 |
| AfaI | GTAC | 4 cut(s) | 105, 749, 906, 2992 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 164, 165, 280, 1269, 1408, 1457, 1481, 2745, 3194 |
| AflIII | ACRYGT | 1 cut(s) | 2416 |
| AgeI | ACCGGT | 2 cut(s) | 605, 1481 |
| AjiI | CACGTC | 2 cut(s) | 725, 2417 |
| AjnI | CCWGG | 7 cut(s) | 310, 634, 1268, 1475, 1737, 2229, 2623 |
| AleI | CACNNNNGTG | 1 cut(s) | 2507 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1491, 1523 |
| Alw21I | GWGCWC | 5 cut(s) | 407, 1061, 1200, 1260, 1509 |
| Alw26I | GTCTC | 4 cut(s) | 300, 671, 2743, 2966 |
| Alw44I | GTGCAC | 1 cut(s) | 1196 |
| AlwI | GGATC | 8 cut(s) | 477, 1188, 1374, 1887, 2001, 2507, 2841, 2932 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1744 |
| ApaI | GGGCCC | 1 cut(s) | 1554 |
| ApaLI | GTGCAC | 1 cut(s) | 1196 |
| ApeKI | GCWGC | 5 cut(s) | 88, 622, 1904, 2018, 2619 |
| ApoI | RAATTY | 5 cut(s) | 219, 227, 461, 787, 2871 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 419, 451, 2944, 2976 |
| AsiGI | ACCGGT | 2 cut(s) | 605, 1481 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 273, 864, 2871 |
| AspA2I | CCTAGG | 2 cut(s) | 2740, 3127 |
| AspLEI | GCGC | 4 cut(s) | 810, 854, 1240, 3078 |
| AsuC2I | CCSGG | 4 cut(s) | 1323, 1452, 1947, 2061 |
| AsuHPI | GGTGA | 6 cut(s) | 91, 278, 299, 464, 629, 2494 |
| AsuII | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| AsuNHI | GCTAGC | 1 cut(s) | 2788 |
| AvaII | GGWCC | 6 cut(s) | 608, 1399, 1479, 1772, 1863, 2637 |
| AvrII | CCTAGG | 2 cut(s) | 2740, 3127 |
| BaeGI | GKGCMC | 2 cut(s) | 1200, 1554 |
| BanI | GGYRCC | 3 cut(s) | 1237, 1484, 2374 |
| BanII | GRGCYC | 4 cut(s) | 407, 1509, 1554, 3168 |
| BbsI | GAAGAC | 1 cut(s) | 608 |
| Bbv12I | GWGCWC | 5 cut(s) | 407, 1061, 1200, 1260, 1509 |
| BbvI | GCAGC | 5 cut(s) | 75, 609, 1891, 2005, 2631 |
| BccI | CCATC | 5 cut(s) | 1238, 1374, 2111, 2770, 2803 |
| BceAI | ACGGC | 3 cut(s) | 795, 1952, 2388 |
| BciT130I | CCWGG | 7 cut(s) | 312, 636, 1270, 1477, 1739, 2231, 2625 |
| BclI | TGATCA | 1 cut(s) | 81 |
| BcnI | CCSGG | 4 cut(s) | 1323, 1452, 1947, 2061 |
| BcoDI | GTCTC | 4 cut(s) | 300, 671, 2743, 2966 |
| BfmI | CTRYAG | 5 cut(s) | 623, 686, 1905, 2019, 2617 |
| BfoI | RGCGCY | 3 cut(s) | 811, 1241, 3079 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1235 |
| BglII | AGATCT | 1 cut(s) | 1973 |
| BlnI | CCTAGG | 2 cut(s) | 2740, 3127 |
| BmcAI | AGTACT | 1 cut(s) | 749 |
| Bme18I | GGWCC | 6 cut(s) | 608, 1399, 1479, 1772, 1863, 2637 |
| BmgBI | CACGTC | 2 cut(s) | 725, 2417 |
| BmiI | GGNNCC | 8 cut(s) | 670, 1239, 1486, 1552, 1553, 2376, 3095, 3165 |
| BmsI | GCATC | 8 cut(s) | 445, 517, 1038, 1909, 1954, 2023, 2169, 2620 |
| BmtI | GCTAGC | 1 cut(s) | 2792 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2154 |
| BpiI | GAAGAC | 1 cut(s) | 608 |
| BpmI | CTGGAG | 1 cut(s) | 2109 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1175 |
| Bpu14I | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| BpuEI | CTTGAG | 1 cut(s) | 731 |
| BpuMI | CCSGG | 4 cut(s) | 1323, 1452, 1947, 2061 |
| BsaAI | YACGTR | 1 cut(s) | 2209 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1465 |
| BsaHI | GRCGYC | 2 cut(s) | 1238, 1384 |
| BsaI | GGTCTC | 3 cut(s) | 671, 2743, 2966 |
| BsaWI | WCCGGW | 4 cut(s) | 605, 1481, 1501, 2728 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1179, 1209, 1491, 1521, 2421, 2451 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 164, 165, 280, 1269, 1408, 1457, 1481, 2745, 3194 |
| Bse118I | RCCGGY | 7 cut(s) | 17, 120, 605, 642, 1343, 1481, 2957 |
| Bse1I | ACTGG | 6 cut(s) | 63, 745, 1201, 1881, 1995, 2505 |
| Bse3DI | GCAATG | 3 cut(s) | 322, 520, 1155 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1465 |
| BseBI | CCWGG | 7 cut(s) | 312, 636, 1270, 1477, 1739, 2231, 2625 |
| BseJI | GATNNNNATC | 1 cut(s) | 1465 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 164, 165, 280, 1269, 1408, 1457, 1481, 2745, 3194 |
| BseMI | GCAATG | 3 cut(s) | 322, 520, 1155 |
| BseMII | CTCAG | 1 cut(s) | 1613 |
| BseNI | ACTGG | 6 cut(s) | 63, 745, 1201, 1881, 1995, 2505 |
| BseRI | GAGGAG | 6 cut(s) | 2235, 2657, 2878, 2881, 2911, 2914 |
| BseSI | GKGCMC | 2 cut(s) | 1200, 1554 |
| BseXI | GCAGC | 5 cut(s) | 75, 609, 1891, 2005, 2631 |
| BsgI | GTGCAG | 1 cut(s) | 2462 |
| Bsh1236I | CGCG | 3 cut(s) | 474, 1235, 1265 |
| BshNI | GGYRCC | 3 cut(s) | 1237, 1484, 2374 |
| BshTI | ACCGGT | 2 cut(s) | 605, 1481 |
| BsiHKAI | GWGCWC | 5 cut(s) | 407, 1061, 1200, 1260, 1509 |
| BslFI | GGGAC | 5 cut(s) | 1424, 1695, 2178, 2247, 2883 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 164, 165, 280, 1269, 1408, 1457, 1481, 2745, 3194 |
| BsmAI | GTCTC | 4 cut(s) | 300, 671, 2743, 2966 |
| BsmFI | GGGAC | 5 cut(s) | 1424, 1695, 2178, 2247, 2883 |
| Bso31I | GGTCTC | 3 cut(s) | 671, 2743, 2966 |
| Bsp119I | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| Bsp120I | GGGCCC | 1 cut(s) | 1550 |
| Bsp1286I | GDGCHC | 7 cut(s) | 407, 1061, 1200, 1260, 1509, 1554, 3168 |
| Bsp19I | CCATGG | 1 cut(s) | 2753 |
| BspCNI | CTCAG | 1 cut(s) | 1614 |
| BspFNI | CGCG | 3 cut(s) | 474, 1235, 1265 |
| BspLI | GGNNCC | 8 cut(s) | 670, 1239, 1486, 1552, 1553, 2376, 3095, 3165 |
| BspMAI | CTGCAG | 5 cut(s) | 627, 690, 1909, 2023, 2621 |
| BspOI | GCTAGC | 1 cut(s) | 2792 |
| BspPI | GGATC | 8 cut(s) | 477, 1188, 1374, 1887, 2001, 2507, 2841, 2932 |
| BspQI | GCTCTTC | 1 cut(s) | 1049 |
| BspT104I | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| BspT107I | GGYRCC | 3 cut(s) | 1237, 1484, 2374 |
| BspTNI | GGTCTC | 3 cut(s) | 671, 2743, 2966 |
| BsrBI | CCGCTC | 1 cut(s) | 1418 |
| BsrDI | GCAATG | 3 cut(s) | 322, 520, 1155 |
| BsrFI | RCCGGY | 7 cut(s) | 17, 120, 605, 642, 1343, 1481, 2957 |
| BsrI | ACTGG | 6 cut(s) | 63, 745, 1201, 1881, 1995, 2505 |
| BssAI | RCCGGY | 7 cut(s) | 17, 120, 605, 642, 1343, 1481, 2957 |
| BssNI | GRCGYC | 2 cut(s) | 1238, 1384 |
| BssT1I | CCWWGG | 6 cut(s) | 672, 1839, 2640, 2740, 2753, 3127 |
| Bst2UI | CCWGG | 7 cut(s) | 312, 636, 1270, 1477, 1739, 2231, 2625 |
| Bst4CI | ACNGT | 8 cut(s) | 41, 190, 682, 1407, 1426, 1689, 1709, 2101 |
| Bst6I | CTCTTC | 3 cut(s) | 993, 1049, 2448 |
| BstACI | GRCGYC | 2 cut(s) | 1238, 1384 |
| BstBAI | YACGTR | 1 cut(s) | 2209 |
| BstBI | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| BstC8I | GCNNGC | 5 cut(s) | 19, 644, 953, 2710, 2790 |
| BstDEI | CTNAG | 3 cut(s) | 509, 1175, 1622 |
| BstDSI | CCRYGG | 2 cut(s) | 1263, 2753 |
| BstFNI | CGCG | 3 cut(s) | 474, 1235, 1265 |
| BstH2I | RGCGCY | 3 cut(s) | 811, 1241, 3079 |
| BstHHI | GCGC | 4 cut(s) | 810, 854, 1240, 3078 |
| BstMAI | GTCTC | 4 cut(s) | 300, 671, 2743, 2966 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 154, 1235, 1829, 3018 |
| BstNI | CCWGG | 7 cut(s) | 312, 636, 1270, 1477, 1739, 2231, 2625 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2154 |
| BstSFI | CTRYAG | 5 cut(s) | 623, 686, 1905, 2019, 2617 |
| BstSLI | GKGCMC | 2 cut(s) | 1200, 1554 |
| BstSNI | TACGTA | 1 cut(s) | 2209 |
| BstUI | CGCG | 3 cut(s) | 474, 1235, 1265 |
| BstV1I | GCAGC | 5 cut(s) | 75, 609, 1891, 2005, 2631 |
| BstV2I | GAAGAC | 1 cut(s) | 608 |
| BstX2I | RGATCY | 2 cut(s) | 1180, 1973 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1720, 2237 |
| BstYI | RGATCY | 2 cut(s) | 1180, 1973 |
| BtgI | CCRYGG | 2 cut(s) | 1263, 2753 |
| BtgZI | GCGATG | 3 cut(s) | 608, 1216, 1804 |
| BtrI | CACGTC | 2 cut(s) | 725, 2417 |
| BtsI | GCAGTG | 3 cut(s) | 152, 2647, 3112 |
| Cac8I | GCNNGC | 5 cut(s) | 19, 644, 953, 2710, 2790 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1744 |
| CfoI | GCGC | 4 cut(s) | 810, 854, 1240, 3078 |
| Cfr10I | RCCGGY | 7 cut(s) | 17, 120, 605, 642, 1343, 1481, 2957 |
| Cfr42I | CCGCGG | 1 cut(s) | 1266 |
| CpoI | CGGWCCG | 1 cut(s) | 608 |
| CseI | GACGC | 3 cut(s) | 463, 1373, 3093 |
| Csp6I | GTAC | 4 cut(s) | 104, 748, 905, 2991 |
| CspAI | ACCGGT | 2 cut(s) | 605, 1481 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 570, 605 |
| CspI | CGGWCCG | 1 cut(s) | 608 |
| CviAII | CATG | 8 cut(s) | 332, 1166, 1220, 1720, 2192, 2303, 2492, 2754 |
| CviQI | GTAC | 4 cut(s) | 104, 748, 905, 2991 |
| DdeI | CTNAG | 3 cut(s) | 509, 1175, 1622 |
| DinI | GGCGCC | 1 cut(s) | 1239 |
| DraI | TTTAAA | 2 cut(s) | 2076, 2391 |
| EaeI | YGGCCR | 4 cut(s) | 15, 637, 1266, 3010 |
| Eam1104I | CTCTTC | 3 cut(s) | 993, 1049, 2448 |
| EarI | CTCTTC | 3 cut(s) | 993, 1049, 2448 |
| Ecl136II | GAGCTC | 2 cut(s) | 405, 1507 |
| Eco105I | TACGTA | 1 cut(s) | 2209 |
| Eco130I | CCWWGG | 6 cut(s) | 672, 1839, 2640, 2740, 2753, 3127 |
| Eco147I | AGGCCT | 1 cut(s) | 273 |
| Eco24I | GRGCYC | 4 cut(s) | 407, 1509, 1554, 3168 |
| Eco31I | GGTCTC | 3 cut(s) | 671, 2743, 2966 |
| Eco32I | GATATC | 1 cut(s) | 2259 |
| Eco47I | GGWCC | 6 cut(s) | 608, 1399, 1479, 1772, 1863, 2637 |
| Eco53kI | GAGCTC | 2 cut(s) | 405, 1507 |
| Eco57I | CTGAAG | 4 cut(s) | 507, 1736, 2170, 2268 |
| EcoICRI | GAGCTC | 2 cut(s) | 405, 1507 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1551 |
| EcoRI | GAATTC | 1 cut(s) | 787 |
| EcoRII | CCWGG | 7 cut(s) | 310, 634, 1268, 1475, 1737, 2229, 2623 |
| EcoRV | GATATC | 1 cut(s) | 2259 |
| EcoT14I | CCWWGG | 6 cut(s) | 672, 1839, 2640, 2740, 2753, 3127 |
| EcoT38I | GRGCYC | 4 cut(s) | 407, 1509, 1554, 3168 |
| EgeI | GGCGCC | 1 cut(s) | 1239 |
| EheI | GGCGCC | 1 cut(s) | 1239 |
| ErhI | CCWWGG | 6 cut(s) | 672, 1839, 2640, 2740, 2753, 3127 |
| FaeI | CATG | 8 cut(s) | 335, 1169, 1223, 1723, 2195, 2306, 2495, 2757 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 712, 744, 2153, 2185, 2256, 2288 |
| FaqI | GGGAC | 5 cut(s) | 1424, 1695, 2178, 2247, 2883 |
| FatI | CATG | 8 cut(s) | 331, 1165, 1219, 1719, 2191, 2302, 2491, 2753 |
| FauI | CCCGC | 1 cut(s) | 2717 |
| FbaI | TGATCA | 1 cut(s) | 81 |
| FriOI | GRGCYC | 4 cut(s) | 407, 1509, 1554, 3168 |
| GlaI | GCGC | 4 cut(s) | 809, 853, 1239, 3077 |
| GsuI | CTGGAG | 1 cut(s) | 2109 |
| HaeII | RGCGCY | 3 cut(s) | 811, 1241, 3079 |
| HgaI | GACGC | 3 cut(s) | 463, 1373, 3093 |
| HhaI | GCGC | 4 cut(s) | 810, 854, 1240, 3078 |
| Hin1I | GRCGYC | 2 cut(s) | 1238, 1384 |
| Hin1II | CATG | 8 cut(s) | 335, 1169, 1223, 1723, 2195, 2306, 2495, 2757 |
| Hin6I | GCGC | 4 cut(s) | 808, 852, 1238, 3076 |
| HinP1I | GCGC | 4 cut(s) | 808, 852, 1238, 3076 |
| HincII | GTYRAC | 1 cut(s) | 2282 |
| HindII | GTYRAC | 1 cut(s) | 2282 |
| HindIII | AAGCTT | 4 cut(s) | 942, 2270, 2307, 2399 |
| HphI | GGTGA | 6 cut(s) | 91, 278, 299, 464, 629, 2494 |
| Hpy166II | GTNNAC | 5 cut(s) | 427, 829, 907, 1198, 2282 |
| Hpy8I | GTNNAC | 5 cut(s) | 427, 829, 907, 1198, 2282 |
| Hpy99I | CGWCG | 6 cut(s) | 1253, 1256, 1407, 1448, 2374, 3109 |
| HpyCH4III | ACNGT | 8 cut(s) | 41, 190, 682, 1407, 1426, 1689, 1709, 2101 |
| HpyCH4IV | ACGT | 3 cut(s) | 724, 2208, 2416 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 154, 1235, 1829, 3018 |
| HpyF3I | CTNAG | 3 cut(s) | 509, 1175, 1622 |
| HpySE526I | ACGT | 3 cut(s) | 724, 2208, 2416 |
| Hsp92I | GRCGYC | 2 cut(s) | 1238, 1384 |
| Hsp92II | CATG | 8 cut(s) | 335, 1169, 1223, 1723, 2195, 2306, 2495, 2757 |
| HspAI | GCGC | 4 cut(s) | 808, 852, 1238, 3076 |
| KasI | GGCGCC | 1 cut(s) | 1237 |
| KroI | GCCGGC | 2 cut(s) | 17, 642 |
| KroNI | GCCGGC | 2 cut(s) | 19, 644 |
| Ksp22I | TGATCA | 1 cut(s) | 81 |
| KspI | CCGCGG | 1 cut(s) | 1266 |
| LguI | GCTCTTC | 1 cut(s) | 1049 |
| Lsp1109I | GCAGC | 5 cut(s) | 75, 609, 1891, 2005, 2631 |
| LweI | GCATC | 8 cut(s) | 445, 517, 1038, 1909, 1954, 2023, 2169, 2620 |
| MaeII | ACGT | 3 cut(s) | 724, 2208, 2416 |
| MbiI | CCGCTC | 1 cut(s) | 1418 |
| MfeI | CAATTG | 2 cut(s) | 236, 855 |
| MflI | RGATCY | 2 cut(s) | 1180, 1973 |
| MhlI | GDGCHC | 7 cut(s) | 407, 1061, 1200, 1260, 1509, 1554, 3168 |
| Mly113I | GGCGCC | 1 cut(s) | 1238 |
| MlyI | GAGTC | 7 cut(s) | 316, 428, 1210, 1285, 1771, 2302, 2506 |
| MmeI | TCCRAC | 3 cut(s) | 1426, 2902, 3176 |
| MreI | CGCCGGCG | 1 cut(s) | 642 |
| MroNI | GCCGGC | 2 cut(s) | 17, 642 |
| MroXI | GAANNNNTTC | 3 cut(s) | 273, 864, 2871 |
| MseI | TTAA | 8 cut(s) | 27, 177, 822, 2075, 2093, 2214, 2390, 3205 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2507, 2807 |
| MspA1I | CMGCKG | 1 cut(s) | 1265 |
| MunI | CAATTG | 2 cut(s) | 236, 855 |
| MvaI | CCWGG | 7 cut(s) | 312, 636, 1270, 1477, 1739, 2231, 2625 |
| MvnI | CGCG | 3 cut(s) | 474, 1235, 1265 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 154, 1235, 1829, 3018 |
| NaeI | GCCGGC | 2 cut(s) | 19, 644 |
| NarI | GGCGCC | 1 cut(s) | 1238 |
| NciI | CCSGG | 4 cut(s) | 1323, 1452, 1947, 2061 |
| NcoI | CCATGG | 1 cut(s) | 2753 |
| NgoMIV | GCCGGC | 2 cut(s) | 17, 642 |
| NheI | GCTAGC | 1 cut(s) | 2788 |
| NlaIII | CATG | 8 cut(s) | 335, 1169, 1223, 1723, 2195, 2306, 2495, 2757 |
| NlaIV | GGNNCC | 8 cut(s) | 670, 1239, 1486, 1552, 1553, 2376, 3095, 3165 |
| NmuCI | GTSAC | 9 cut(s) | 287, 1124, 1454, 1789, 1872, 1986, 2287, 2509, 2908 |
| NspV | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| OliI | CACNNNNGTG | 1 cut(s) | 2507 |
| PasI | CCCWGGG | 1 cut(s) | 2230 |
| PceI | AGGCCT | 1 cut(s) | 273 |
| PciSI | GCTCTTC | 1 cut(s) | 1049 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1300, 2933 |
| PdiI | GCCGGC | 2 cut(s) | 19, 644 |
| PdmI | GAANNNNTTC | 3 cut(s) | 273, 864, 2871 |
| PfeI | GAWTC | 9 cut(s) | 62, 328, 383, 631, 1296, 1664, 1782, 2225, 2685 |
| PfoI | TCCNGGA | 1 cut(s) | 1321 |
| PinAI | ACCGGT | 2 cut(s) | 605, 1481 |
| PleI | GAGTC | 7 cut(s) | 315, 427, 1210, 1285, 1771, 2301, 2506 |
| PluTI | GGCGCC | 1 cut(s) | 1241 |
| PpsI | GAGTC | 7 cut(s) | 315, 427, 1210, 1285, 1771, 2301, 2506 |
| Ppu21I | YACGTR | 1 cut(s) | 2209 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2154 |
| Psp124BI | GAGCTC | 2 cut(s) | 407, 1509 |
| Psp6I | CCWGG | 7 cut(s) | 310, 634, 1268, 1475, 1737, 2229, 2623 |
| PspGI | CCWGG | 7 cut(s) | 310, 634, 1268, 1475, 1737, 2229, 2623 |
| PspN4I | GGNNCC | 8 cut(s) | 670, 1239, 1486, 1552, 1553, 2376, 3095, 3165 |
| PspOMI | GGGCCC | 1 cut(s) | 1550 |
| PstI | CTGCAG | 5 cut(s) | 627, 690, 1909, 2023, 2621 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1744 |
| PsuI | RGATCY | 2 cut(s) | 1180, 1973 |
| RsaI | GTAC | 4 cut(s) | 105, 749, 906, 2992 |
| RsaNI | GTAC | 4 cut(s) | 104, 748, 905, 2991 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2507, 2807 |
| Rsr2I | CGGWCCG | 1 cut(s) | 608 |
| RsrII | CGGWCCG | 1 cut(s) | 608 |
| SacI | GAGCTC | 2 cut(s) | 407, 1509 |
| SacII | CCGCGG | 1 cut(s) | 1266 |
| SapI | GCTCTTC | 1 cut(s) | 1049 |
| SaqAI | TTAA | 8 cut(s) | 27, 177, 822, 2075, 2093, 2214, 2390, 3205 |
| SbfI | CCTGCAGG | 1 cut(s) | 690 |
| ScaI | AGTACT | 1 cut(s) | 749 |
| SchI | GAGTC | 7 cut(s) | 316, 428, 1210, 1285, 1771, 2302, 2506 |
| SdaI | CCTGCAGG | 1 cut(s) | 690 |
| SduI | GDGCHC | 7 cut(s) | 407, 1061, 1200, 1260, 1509, 1554, 3168 |
| SfaNI | GCATC | 8 cut(s) | 445, 517, 1038, 1909, 1954, 2023, 2169, 2620 |
| SfcI | CTRYAG | 5 cut(s) | 623, 686, 1905, 2019, 2617 |
| SfoI | GGCGCC | 1 cut(s) | 1239 |
| Sfr303I | CCGCGG | 1 cut(s) | 1266 |
| SfuI | TTCGAA | 3 cut(s) | 1928, 2042, 3171 |
| SgrAI | CRCCGGYG | 1 cut(s) | 642 |
| SgrBI | CCGCGG | 1 cut(s) | 1266 |
| SinI | GGWCC | 6 cut(s) | 608, 1399, 1479, 1772, 1863, 2637 |
| SmiI | ATTTAAAT | 1 cut(s) | 2391 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2507, 2807 |
| SmlI | CTYRAG | 1 cut(s) | 710 |
| SmoI | CTYRAG | 1 cut(s) | 710 |
| SnaBI | TACGTA | 1 cut(s) | 2209 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 690 |
| SseBI | AGGCCT | 1 cut(s) | 273 |
| SspDI | GGCGCC | 1 cut(s) | 1237 |
| SspI | AATATT | 1 cut(s) | 1584 |
| SstI | GAGCTC | 2 cut(s) | 407, 1509 |
| StuI | AGGCCT | 1 cut(s) | 273 |
| StyI | CCWWGG | 6 cut(s) | 672, 1839, 2640, 2740, 2753, 3127 |
| SwaI | ATTTAAAT | 1 cut(s) | 2391 |
| TaaI | ACNGT | 8 cut(s) | 41, 190, 682, 1407, 1426, 1689, 1709, 2101 |
| TaiI | ACGT | 3 cut(s) | 727, 2211, 2419 |
| TaqI | TCGA | 9 cut(s) | 1275, 1294, 1469, 1606, 1780, 1928, 2042, 2915, 3171 |
| TaqII | GACCGA | 2 cut(s) | 397, 1789 |
| TatI | WGTACW | 3 cut(s) | 747, 904, 2990 |
| TauI | GCSGC | 8 cut(s) | 642, 649, 958, 1238, 1268, 1421, 2708, 3112 |
| TfiI | GAWTC | 9 cut(s) | 62, 328, 383, 631, 1296, 1664, 1782, 2225, 2685 |
| Tru1I | TTAA | 8 cut(s) | 27, 177, 822, 2075, 2093, 2214, 2390, 3205 |
| Tru9I | TTAA | 8 cut(s) | 27, 177, 822, 2075, 2093, 2214, 2390, 3205 |
| TseFI | GTSAC | 9 cut(s) | 287, 1124, 1454, 1789, 1872, 1986, 2287, 2509, 2908 |
| TseI | GCWGC | 5 cut(s) | 88, 622, 1904, 2018, 2619 |
| Tsp45I | GTSAC | 9 cut(s) | 287, 1124, 1454, 1789, 1872, 1986, 2287, 2509, 2908 |
| TspGWI | ACGGA | 4 cut(s) | 908, 1428, 1473, 3045 |
| VneI | GTGCAC | 1 cut(s) | 1196 |
| VpaK11BI | GGWCC | 6 cut(s) | 608, 1399, 1479, 1772, 1863, 2637 |
| XapI | RAATTY | 5 cut(s) | 219, 227, 461, 787, 2871 |
| XbaI | TCTAGA | 3 cut(s) | 793, 2603, 2863 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 662, 1873 |
| XmaJI | CCTAGG | 2 cut(s) | 2740, 3127 |
| XmnI | GAANNNNTTC | 3 cut(s) | 273, 864, 2871 |
| ZrmI | AGTACT | 1 cut(s) | 749 |