Rmu_sc0007663.1_g000020
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007663.1
Physical Location & Seq
Reverse (-)
89577 .. 90008
432 bp
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UTR
Exon/CDS
Intron
Rmu_sc0007663.1_g000020.1.cds

Sequence Viewer

Length: 225 bp
atgaaaagaccagagtacgtcgagttaatgcggaggcttggtgcattaggtgacggtaaccaagatcagagtacactatcacaagatgaatgggaagtagcctatttgtacttgtcatttgtcttgaggaagcggggccaacctgatcggactcaaacaaatagtagaagagataaagggaagatgcatatatcaaaagaggacatattgaacattgaacattag

Protein Analysis

74

Amino Acids

8.75

Weight (kDa)

8.08

Isoelectric Point (pI)

78.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 31, 133
AfaI GTAC 3 cut(s) 17, 73, 110
AgsI TTSAA 2 cut(s) 211, 218
AoxI GGCC 1 cut(s) 136
AspS9I GGNCC 1 cut(s) 136
AsuHPI GGTGA 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 137
BmsI GCATC 1 cut(s) 174
BpuEI CTTGAG 1 cut(s) 145
BsaXI ACNNNNNCTCC 2 cut(s) 25, 55
BshFI GGCC 1 cut(s) 138
BsnI GGCC 1 cut(s) 138
Bsp143I GATC 2 cut(s) 64, 145
BspACI CCGC 2 cut(s) 31, 133
BspANI GGCC 1 cut(s) 138
BspLI GGNNCC 1 cut(s) 137
BssMI GATC 2 cut(s) 64, 145
Bst4CI ACNGT 1 cut(s) 56
Bst6I CTCTTC 1 cut(s) 163
BstEII GGTNACC 1 cut(s) 56
BstKTI GATC 2 cut(s) 67, 148
BstMBI GATC 2 cut(s) 64, 145
BstPI GGTNACC 1 cut(s) 56
BsuRI GGCC 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 136
Csp6I GTAC 3 cut(s) 16, 72, 109
CviJI RGCY 3 cut(s) 37, 101, 138
CviKI_1 RGCY 3 cut(s) 37, 101, 138
CviQI GTAC 3 cut(s) 16, 72, 109
DpnI GATC 2 cut(s) 66, 147
DpnII GATC 2 cut(s) 64, 145
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
Eco91I GGTNACC 1 cut(s) 56
EcoO65I GGTNACC 1 cut(s) 56
EcoT22I ATGCAT 1 cut(s) 189
FaiI YATR 3 cut(s) 189, 191, 206
FauI CCCGC 1 cut(s) 126
HaeIII GGCC 1 cut(s) 138
HinfI GANTC 1 cut(s) 151
HphI GGTGA 1 cut(s) 62
Hpy166II GTNNAC 1 cut(s) 74
Hpy188I TCNGA 2 cut(s) 69, 150
Hpy188III TCNNGA 1 cut(s) 124
Hpy8I GTNNAC 1 cut(s) 74
Hpy99I CGWCG 1 cut(s) 23
HpyCH4III ACNGT 1 cut(s) 56
HpyCH4IV ACGT 1 cut(s) 18
HpyCH4V TGCA 2 cut(s) 44, 187
HpySE526I ACGT 1 cut(s) 18
Kzo9I GATC 2 cut(s) 64, 145
LpnPI CCDG 2 cut(s) 24, 156
LweI GCATC 1 cut(s) 174
MaeII ACGT 1 cut(s) 18
MaeIII GTNAC 2 cut(s) 50, 56
MalI GATC 2 cut(s) 66, 147
MboI GATC 2 cut(s) 64, 145
MboII GAAGA 2 cut(s) 180, 193
MlyI GAGTC 1 cut(s) 145
MnlI CCTC 3 cut(s) 27, 120, 193
Mph1103I ATGCAT 1 cut(s) 189
MseI TTAA 1 cut(s) 26
NdeII GATC 2 cut(s) 64, 145
NlaIV GGNNCC 1 cut(s) 137
NmuCI GTSAC 1 cut(s) 50
NsiI ATGCAT 1 cut(s) 189
PleI GAGTC 1 cut(s) 145
PpsI GAGTC 1 cut(s) 145
PspEI GGTNACC 1 cut(s) 56
PspN4I GGNNCC 1 cut(s) 137
PspPI GGNCC 1 cut(s) 136
RsaI GTAC 3 cut(s) 17, 73, 110
RsaNI GTAC 3 cut(s) 16, 72, 109
SaqAI TTAA 1 cut(s) 26
Sau3AI GATC 2 cut(s) 64, 145
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 145
SetI ASST 3 cut(s) 21, 52, 145
SfaNI GCATC 1 cut(s) 174
SgeI CNNG 9 cut(s) 23, 34, 50, 74, 95, 124, 136, 146, 155
SmlI CTYRAG 1 cut(s) 124
SmoI CTYRAG 1 cut(s) 124
SsiI CCGC 2 cut(s) 31, 133
TaaI ACNGT 1 cut(s) 56
TaiI ACGT 1 cut(s) 21
TaqI TCGA 1 cut(s) 21
TatI WGTACW 2 cut(s) 71, 108
Tru1I TTAA 1 cut(s) 26
Tru9I TTAA 1 cut(s) 26
TseFI GTSAC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 50
TspDTI ATGAA 2 cut(s) 17, 102
Zsp2I ATGCAT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.