Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012136.1

Orthogroup ID

OG0006142

Physical Location & Seq

Genomic Coordinates Forward (+)

47496 .. 50564

Gene Structure 3069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012136.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

atgatgcgccagcttttgaagaagcaagccaagactagtccacttttcctggctcgatctttgagttcctcctcgtcccactcatttggcaagccattctttgctccccaaaactactactactccatcccaccatccaagactcacctctattcatccttcttttgcacccttatacacctctacttggcctgcggcagattctccgatgcttcccacgccttcttctctatgcgaagtcatggcctcgttcctgttctgcctctttggaatcggcttcttcaccatttcagtgcctctggtttgtcttctcaggtatcccttctctactctgagatgctctcctgtggggttgtgcctagtcttttcacccgcaacatattgattcactctttctgcaaagtcggaaacttgagtctggcactgcatttcttaagaaataatactcaaattgatactgtttcctataacactctcatttggggcttctcccaacaaggaatgccttatcaagcttttggatttttgtctcaaatgctgcggagggctatattcatagattcttatacttgcaatttactagttaacgggttttgccgaattggcctagtagactatgcagaatgggttatggacaatttggtcagtggtggaattactcaggatgttgtaggttttaacaccttgattgctggatattgcaaagctggacaagttagccgtgcactcgagttaattgagagaatggagagggatggtcttcttcctgatactgttacttataatactcttgttcatgggttttgtcacgtgggggattttgtaaatgccaagagtacaatacataacattttgagatctcaaggaaacgaagacggccctcataatgagagagaccgtgatcagaactggactggcagtatgaattttagaccaaatgttataactctcaccactctcattagcgcttacagtaagcatcaaggacttgaagaggctctttctctgtatgaggaaatggttatgaatggcattttcccggatgttgttacttatagctccattatatatggtctttgcaagcatgggaggctgtcagaagccaaagtgctcttaagggagatagagaaaatgggtgtaaatcctaataatgtctccttcactaccctcgtggattctttgtttaaggcaggctcttctagggaagctctcatcgttcaaggccaaatggtggttcgcggcctagtttttgatttagtaatttgcactgctttgatggctggactgtttaaagttggtaaagtcggcgaggctaaggacctgtttcgaacaatttcaaagctcagcttagttccaaactgtatcacctattctgctttgataaatgggcattgcaattcaggagacatgggcgctgcagaagcaatacttagagaaatggaagataaacatgttttccccaatattatcacttattcttctctcataaagggttatatgaagaaaggaatgattggtgatgctattggtttattgaggaagatggtgcaaaaaaatgtattgccaaatgtttttgtgtatgcaatactaattgatgggtgttttaaggcaggtaaacaggaatttgcccttgatctctacaatgaaatgaaaattagaggattggaggacaacagtttcatatttgatgcttttgtgaacaacatgaaaaagtgcagacggatggaacaagctgagggattaattatggatatgacttctgagggcttgtttcttgaccgtgttaactacacatctctgatggatggcttctttaaagtgggaaaagagtcaattgctcttaacttgttccaagaaatggtggagaaaaatatagggtttgatgttgtttcatacaatgtcttgataaatggtctgttgcggcttgggaaatatgaagtcaaatctgtctatactggaatgagagagttgggagtggctcccgactgtgtcacgtacaataccctgattattgcattctgcagagagggtgacactgaaaatgcaattgaactttggaatgagatgaagggtcaagggttcattttaaattcattcacttgtaacattctgataggagggctttgtgaagaagataagattgaaaaagcaatggatgtcttaaatgaaatggtggctgtgggttctctccctacctcagttactcataggcttctgcttgatgcttcttcaaagagtagaagagcagatccaattttgcaaatgcatcagaagcttgtaagtatggggcttgacctcgatcatgatgtttataataatctcatcactatcttatgtaggctgggaatgaccaggaaggccactacagtattagaagagatgactggaagaggatttttagctgataccattacttacaatgcccttatacgtggatatggtatgagcagccatcttaaaagggcttttgctacacactcaaagatgctggctgagggagtttctccaaatattgaaacgtacaatattcttttaggggtcctttcaggtgctggtttgatgacaaaggcagatgaattatttagtgaaatgaagaacataggctttcttcctaatgcttccacatatgatatattggtttccggctatggtaagattggaaataagaaggaagccataaggcgttattgtgaaatggtaagcaaaagttttgttcccaatactagcacctacaatgtgcttattagtgattttgctaaggtgggaaagatgagccaagctagggagcttatgaatgagatgcaggcaaggggtgcctgtcctaattcttcaacatacagcatactaatctgtggctggtgtaagctatcaaagcagccagaggtggagaagaagttgcgaaagtcataccgagctgaggcaaagagattattagccgagatgaatgagaaagggtatgttccaggtgaaagtaccctttcatctatcagttctacctttgctagaccaggaaagaaggctgatgctcagaggctattaaaggaactgtacatcagcaagaacatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

1022

Amino Acids

113.96

Weight (kDa)

8.64

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14770 AT5G14770 AT5G14770 AT5G14770 AT5G14770
fragaria_vesca	FvH4_7g02371
malus_domestica	MD00G1202300.v1.1 MD00G1202400.v1.1 MD03G1142100.v1.1 MD11G1161100.v1.1 MD11G1161200.v1.1
prunus_persica	Prupe.2G007100_v2.0.a1
pyrus_communis	pycom03g09690 pycom11g13400
rosa_chinensis	RchiOBHm_Chr1g0384651
rosa_laevigata	RLG00000008173 RLG00000026023
rosa_multiflora	Rmu_co8325115.1_g000001 Rmu_sc0012136.1_g000024
rosa_roxburghii	Rroxscaffold_4G00276490
rosa_rugosa	Rorug01G0450400
rosa_samantha	Rh1AG475000 Rh1BG433200 Rh1CG446400 Rh1CG446600 Rh1DG465700
rosa_wichuraiana	Rw1G039760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	783, 944, 2313
AasI	GACNNNNNNGTC	1 cut(s)	641
Acc36I	ACCTGC	1 cut(s)	1601
AccB1I	GGYRCC	1 cut(s)	2813
AccB7I	CCANNNNNTGG	2 cut(s)	1231, 1858
AccI	GTMKAC	1 cut(s)	612
AccII	CGCG	1 cut(s)	1239
AciI	CCGC	5 cut(s)	195, 373, 541, 1239, 1921
AclWI	GGATC	1 cut(s)	2243
AcsI	RAATTY	3 cut(s)	925, 1622, 2089
AcvI	CACGTG	1 cut(s)	811
AfaI	GTAC	5 cut(s)	838, 1997, 2522, 2974, 3050
AfeI	AGCGCT	1 cut(s)	967
AfiI	CCNNNNNNNGG	5 cut(s)	187, 1231, 1858, 2782, 2917
AflII	CTTAAG	2 cut(s)	433, 1114
AflIII	ACRYGT	1 cut(s)	1450
AgsI	TTSAA	9 cut(s)	19, 992, 1220, 1338, 2051, 2144, 2232, 2516, 2832
AhlI	ACTAGT	2 cut(s)	35, 580
AjnI	CCWGG	4 cut(s)	48, 2351, 2962, 3007
AjuI	GAANNNNNNNTTGG	2 cut(s)	1218, 1250
Alw21I	GWGCWC	2 cut(s)	727, 1113
Alw26I	GTCTC	4 cut(s)	534, 888, 1159, 1398
Alw44I	GTGCAC	1 cut(s)	723
AlwI	GGATC	1 cut(s)	2243
AlwNI	CAGNNNCTG	1 cut(s)	2552
Ama87I	CYCGRG	1 cut(s)	728
Aor51HI	AGCGCT	1 cut(s)	967
AoxI	GGCC	7 cut(s)	189, 244, 604, 877, 1222, 1240, 2358
ApaLI	GTGCAC	1 cut(s)	723
ApeKI	GCWGC	4 cut(s)	538, 1415, 2448, 2875
ApoI	RAATTY	3 cut(s)	925, 1622, 2089
AseI	ATTAAT	1 cut(s)	1742
Asp700I	GAANNNNTTC	1 cut(s)	1333
AspLEI	GCGC	3 cut(s)	9, 968, 1415
AspS9I	GGNCC	3 cut(s)	878, 1318, 2539
AsuC2I	CCSGG	1 cut(s)	1040
AsuHPI	GGTGA	8 cut(s)	137, 275, 361, 943, 1357, 1529, 2042, 2978
AsuII	TTCGAA	1 cut(s)	1327
AvaI	CYCGRG	1 cut(s)	728
AvaII	GGWCC	2 cut(s)	1318, 2539
BaeGI	GKGCMC	1 cut(s)	727
BanI	GGYRCC	1 cut(s)	2813
BauI	CACGAG	1 cut(s)	1169
BbrPI	CACGTG	1 cut(s)	811
BbsI	GAAGAC	3 cut(s)	300, 752, 879
Bbv12I	GWGCWC	2 cut(s)	727, 1113
BbvCI	CCTCAGC	3 cut(s)	1734, 2493, 2916
BbvI	GCAGC	4 cut(s)	525, 1402, 2460, 2887
BceAI	ACGGC	2 cut(s)	705, 892
BciT130I	CCWGG	4 cut(s)	50, 2353, 2964, 3009
BciVI	GTATCC	1 cut(s)	328
BclI	TGATCA	1 cut(s)	901
BcnI	CCSGG	1 cut(s)	1040
BcoDI	GTCTC	4 cut(s)	534, 888, 1159, 1398
BcuI	ACTAGT	2 cut(s)	35, 580
BfaI	CTAG	9 cut(s)	36, 360, 581, 608, 1200, 1244, 2724, 2781, 3003
BfmI	CTRYAG	3 cut(s)	1416, 2020, 2364
BfoI	RGCGCY	2 cut(s)	969, 1416
BfrI	CTTAAG	2 cut(s)	433, 1114
BfuAI	ACCTGC	1 cut(s)	1601
BfuI	GTATCC	1 cut(s)	328
BglI	GCCNNNNNGGC	1 cut(s)	603
BglII	AGATCT	1 cut(s)	857
BisI	GCNGC	7 cut(s)	196, 539, 1240, 1416, 1922, 2449, 2876
BlpI	GCTNAGC	1 cut(s)	1343
BlsI	GCNGC	7 cut(s)	197, 540, 1241, 1417, 1923, 2450, 2877
Bme1390I	CCNGG	5 cut(s)	50, 1040, 2353, 2964, 3009
Bme18I	GGWCC	2 cut(s)	1318, 2539
BmeT110I	CYCGRG	1 cut(s)	728
BmgT120I	GGNCC	3 cut(s)	878, 1318, 2539
BmiI	GGNNCC	3 cut(s)	1980, 2540, 2815
BmrFI	CCNGG	5 cut(s)	50, 1040, 2353, 2964, 3009
BpiI	GAAGAC	3 cut(s)	300, 752, 879
BplI	GAGNNNNNCTC	2 cut(s)	326, 358
Bpu10I	CCTNAGC	5 cut(s)	1314, 1734, 2493, 2757, 2916
Bpu1102I	GCTNAGC	1 cut(s)	1343
Bpu14I	TTCGAA	1 cut(s)	1327
BpuEI	CTTGAG	2 cut(s)	433, 846
BpuMI	CCSGG	1 cut(s)	1040
BsaAI	YACGTR	3 cut(s)	811, 1995, 2432
BsaI	GGTCTC	1 cut(s)	888
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 2879, 2909
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 1231, 1858, 2782, 2917
Bse1I	ACTGG	4 cut(s)	914, 919, 1960, 2389
Bse3DI	GCAATG	2 cut(s)	1390, 2157
BseBI	CCWGG	4 cut(s)	50, 2353, 2964, 3009
BseGI	GGATG	9 cut(s)	126, 134, 155, 670, 760, 1048, 1728, 1810, 2161
BseLI	CCNNNNNNNGG	5 cut(s)	187, 1231, 1858, 2782, 2917
BseMI	GCAATG	2 cut(s)	1390, 2157
BseNI	ACTGG	4 cut(s)	914, 919, 1960, 2389
BseRI	GAGGAG	1 cut(s)	61
BseSI	GKGCMC	1 cut(s)	727
BseXI	GCAGC	4 cut(s)	525, 1402, 2460, 2887
BseYI	CCCAGC	1 cut(s)	2341
BsgI	GTGCAG	1 cut(s)	1735
Bsh1236I	CGCG	1 cut(s)	1239
BshFI	GGCC	7 cut(s)	191, 246, 606, 879, 1224, 1242, 2360
BshNI	GGYRCC	1 cut(s)	2813
BsiHKAI	GWGCWC	2 cut(s)	727, 1113
BsiHKCI	CYCGRG	1 cut(s)	728
BsiSI	CCGG	2 cut(s)	1040, 2643
BslFI	GGGAC	1 cut(s)	61
BslI	CCNNNNNNNGG	5 cut(s)	187, 1231, 1858, 2782, 2917
BsmAI	GTCTC	4 cut(s)	534, 888, 1159, 1398
BsmFI	GGGAC	1 cut(s)	61
BsmI	GAATGC	2 cut(s)	507, 2015
BsnI	GGCC	7 cut(s)	191, 246, 606, 879, 1224, 1242, 2360
Bso31I	GGTCTC	1 cut(s)	888
BsoBI	CYCGRG	1 cut(s)	728
Bsp119I	TTCGAA	1 cut(s)	1327
Bsp1286I	GDGCHC	2 cut(s)	727, 1113
Bsp1407I	TGTACA	1 cut(s)	3048
Bsp143I	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
Bsp1720I	GCTNAGC	1 cut(s)	1343
BspACI	CCGC	5 cut(s)	195, 373, 541, 1239, 1921
BspANI	GGCC	7 cut(s)	191, 246, 606, 879, 1224, 1242, 2360
BspFNI	CGCG	1 cut(s)	1239
BspHI	TCATGA	1 cut(s)	2302
BspLI	GGNNCC	3 cut(s)	1980, 2540, 2815
BspMAI	CTGCAG	2 cut(s)	1420, 2024
BspMI	ACCTGC	1 cut(s)	1601
BspPI	GGATC	1 cut(s)	2243
BspQI	GCTCTTC	2 cut(s)	1201, 2236
BspT104I	TTCGAA	1 cut(s)	1327
BspT107I	GGYRCC	1 cut(s)	2813
BspTI	CTTAAG	2 cut(s)	433, 1114
BspTNI	GGTCTC	1 cut(s)	888
BsrDI	GCAATG	2 cut(s)	1390, 2157
BsrGI	TGTACA	1 cut(s)	3048
BsrI	ACTGG	4 cut(s)	914, 919, 1960, 2389
BssMI	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
BssSI	CACGAG	1 cut(s)	1169
Bst2BI	CACGAG	1 cut(s)	1169
Bst2UI	CCWGG	4 cut(s)	50, 2353, 2964, 3009
Bst6I	CTCTTC	5 cut(s)	987, 1201, 2236, 2370, 2383
BstAFI	CTTAAG	2 cut(s)	433, 1114
BstAPI	GCANNNNNTGC	1 cut(s)	2813
BstAUI	TGTACA	1 cut(s)	3048
BstBAI	YACGTR	3 cut(s)	811, 1995, 2432
BstBI	TTCGAA	1 cut(s)	1327
BstC8I	GCNNGC	8 cut(s)	11, 27, 92, 193, 1082, 1192, 2490, 2805
BstF5I	GGATG	9 cut(s)	126, 134, 155, 670, 760, 1048, 1728, 1810, 2161
BstFNI	CGCG	1 cut(s)	1239
BstH2I	RGCGCY	2 cut(s)	969, 1416
BstHHI	GCGC	3 cut(s)	9, 968, 1415
BstKTI	GATC	6 cut(s)	59, 860, 904, 1636, 2251, 2302
BstMAI	GTCTC	4 cut(s)	534, 888, 1159, 1398
BstMBI	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
BstMWI	GCNNNNNNNGC	8 cut(s)	218, 603, 1090, 1277, 1421, 2272, 2813, 2872
BstNI	CCWGG	4 cut(s)	50, 2353, 2964, 3009
BstNSI	RCATGY	1 cut(s)	1454
BstSCI	CCNGG	5 cut(s)	48, 1038, 2351, 2962, 3007
BstSFI	CTRYAG	3 cut(s)	1416, 2020, 2364
BstSLI	GKGCMC	1 cut(s)	727
BstUI	CGCG	1 cut(s)	1239
BstV1I	GCAGC	4 cut(s)	525, 1402, 2460, 2887
BstV2I	GAAGAC	3 cut(s)	300, 752, 879
BstX2I	RGATCY	2 cut(s)	857, 2248
BstXI	CCANNNNNNTGG	1 cut(s)	86
BstYI	RGATCY	2 cut(s)	857, 2248
BsuI	GTATCC	1 cut(s)	328
BsuRI	GGCC	7 cut(s)	191, 246, 606, 879, 1224, 1242, 2360
BtsCI	GGATG	9 cut(s)	126, 134, 155, 670, 760, 1048, 1728, 1810, 2161
BtsI	GCAGTG	2 cut(s)	422, 1266
BtsIMutI	CAGTG	5 cut(s)	298, 422, 652, 1266, 2034
BveI	ACCTGC	1 cut(s)	1601
Cac8I	GCNNGC	8 cut(s)	11, 27, 92, 193, 1082, 1192, 2490, 2805
CaiI	CAGNNNCTG	1 cut(s)	2552
CciI	TCATGA	1 cut(s)	2302
CfoI	GCGC	3 cut(s)	9, 968, 1415
Cfr13I	GGNCC	3 cut(s)	878, 1318, 2539
Csp6I	GTAC	5 cut(s)	837, 1996, 2521, 2973, 3049
CviAII	CATG	7 cut(s)	242, 797, 1085, 1408, 1451, 1705, 2303
CviQI	GTAC	5 cut(s)	837, 1996, 2521, 2973, 3049
DpnI	GATC	6 cut(s)	58, 859, 903, 1635, 2250, 2301
DpnII	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
DraI	TTTAAA	3 cut(s)	1291, 1816, 2088
DrdI	GACNNNNNNGTC	1 cut(s)	641
DseDI	GACNNNNNNGTC	1 cut(s)	641
Eam1104I	CTCTTC	5 cut(s)	987, 1201, 2236, 2370, 2383
EarI	CTCTTC	5 cut(s)	987, 1201, 2236, 2370, 2383
Eco31I	GGTCTC	1 cut(s)	888
Eco47I	GGWCC	2 cut(s)	1318, 2539
Eco47III	AGCGCT	1 cut(s)	967
Eco72I	CACGTG	1 cut(s)	811
Eco88I	CYCGRG	1 cut(s)	728
EcoO109I	RGGNCCY	2 cut(s)	1318, 2539
EcoRII	CCWGG	4 cut(s)	48, 2351, 2962, 3007
EcoT22I	ATGCAT	1 cut(s)	2268
FaeI	CATG	7 cut(s)	245, 800, 1088, 1411, 1454, 1708, 2306
FalI	AAGNNNNNCTT	8 cut(s)	83, 115, 984, 1016, 1331, 1363, 1413, 1445
FaqI	GGGAC	1 cut(s)	61
FatI	CATG	7 cut(s)	241, 796, 1084, 1407, 1450, 1704, 2302
FauI	CCCGC	1 cut(s)	380
FauNDI	CATATG	2 cut(s)	2626, 3065
FbaI	TGATCA	1 cut(s)	901
FblI	GTMKAC	1 cut(s)	612
Fnu4HI	GCNGC	7 cut(s)	196, 539, 1240, 1416, 1922, 2449, 2876
FokI	GGATG	9 cut(s)	113, 121, 142, 677, 767, 1055, 1735, 1817, 2168
Fsp4HI	GCNGC	7 cut(s)	196, 539, 1240, 1416, 1922, 2449, 2876
FspBI	CTAG	9 cut(s)	36, 360, 581, 608, 1200, 1244, 2724, 2781, 3003
GlaI	GCGC	3 cut(s)	8, 967, 1414
GluI	GCNGC	7 cut(s)	196, 539, 1240, 1416, 1922, 2449, 2876
GsaI	CCCAGC	1 cut(s)	2345
HaeII	RGCGCY	2 cut(s)	969, 1416
HaeIII	GGCC	7 cut(s)	191, 246, 606, 879, 1224, 1242, 2360
HapII	CCGG	2 cut(s)	1040, 2643
HhaI	GCGC	3 cut(s)	9, 968, 1415
Hin1II	CATG	7 cut(s)	245, 800, 1088, 1411, 1454, 1708, 2306
Hin6I	GCGC	3 cut(s)	7, 966, 1413
HinP1I	GCGC	3 cut(s)	7, 966, 1413
HincII	GTYRAC	2 cut(s)	586, 1786
HindII	GTYRAC	2 cut(s)	586, 1786
HindIII	AAGCTT	2 cut(s)	513, 2273
HinfI	GANTC	8 cut(s)	142, 201, 271, 385, 415, 560, 1175, 1829
HpaI	GTTAAC	2 cut(s)	586, 1786
HpaII	CCGG	2 cut(s)	1040, 2643
HphI	GGTGA	8 cut(s)	137, 275, 361, 943, 1357, 1529, 2042, 2978
Hpy166II	GTNNAC	7 cut(s)	41, 586, 613, 725, 1616, 1699, 1786
Hpy188III	TCNNGA	7 cut(s)	662, 767, 1401, 1775, 1903, 1982, 2303
Hpy8I	GTNNAC	7 cut(s)	41, 586, 613, 725, 1616, 1699, 1786
HpyAV	CCTTC	8 cut(s)	169, 232, 332, 1168, 2062, 2350, 2662, 3010
HpyCH4IV	ACGT	4 cut(s)	810, 1994, 2431, 2519
HpyF10VI	GCNNNNNNNGC	8 cut(s)	218, 603, 1090, 1277, 1421, 2272, 2813, 2872
HpySE526I	ACGT	4 cut(s)	810, 1994, 2431, 2519
Hsp92II	CATG	7 cut(s)	245, 800, 1088, 1411, 1454, 1708, 2306
HspAI	GCGC	3 cut(s)	7, 966, 1413
Ksp22I	TGATCA	1 cut(s)	901
KspAI	GTTAAC	2 cut(s)	586, 1786
Kzo9I	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
LguI	GCTCTTC	2 cut(s)	1201, 2236
LmnI	GCTCC	4 cut(s)	109, 1064, 1984, 2785
Lsp1109I	GCAGC	4 cut(s)	525, 1402, 2460, 2887
MaeI	CTAG	9 cut(s)	36, 360, 581, 608, 1200, 1244, 2724, 2781, 3003
MaeII	ACGT	4 cut(s)	810, 1994, 2431, 2519
MaeIII	GTNAC	7 cut(s)	775, 806, 1048, 1990, 2030, 2102, 2200
MalI	GATC	6 cut(s)	58, 859, 903, 1635, 2250, 2301
MboI	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
MfeI	CAATTG	2 cut(s)	1833, 2046
MflI	RGATCY	2 cut(s)	857, 2248
MhlI	GDGCHC	2 cut(s)	727, 1113
MlyI	GAGTC	3 cut(s)	136, 424, 1838
MmeI	TCCRAC	1 cut(s)	385
Mph1103I	ATGCAT	1 cut(s)	2268
MroXI	GAANNNNTTC	1 cut(s)	1333
MslI	CAYNNNNRTG	1 cut(s)	291
MspCI	CTTAAG	2 cut(s)	433, 1114
MspI	CCGG	2 cut(s)	1040, 2643
MspR9I	CCNGG	5 cut(s)	50, 1040, 2353, 2964, 3009
MunI	CAATTG	2 cut(s)	1833, 2046
Mva1269I	GAATGC	2 cut(s)	507, 2015
MvaI	CCWGG	4 cut(s)	50, 2353, 2964, 3009
MvnI	CGCG	1 cut(s)	1239
MwoI	GCNNNNNNNGC	8 cut(s)	218, 603, 1090, 1277, 1421, 2272, 2813, 2872
NciI	CCSGG	1 cut(s)	1040
NdeI	CATATG	2 cut(s)	2626, 3065
NdeII	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
NlaIII	CATG	7 cut(s)	245, 800, 1088, 1411, 1454, 1708, 2306
NlaIV	GGNNCC	3 cut(s)	1980, 2540, 2815
NmeAIII	GCCGAG	1 cut(s)	2962
NmuCI	GTSAC	3 cut(s)	806, 1990, 2030
NsiI	ATGCAT	1 cut(s)	2268
NspI	RCATGY	1 cut(s)	1454
NspV	TTCGAA	1 cut(s)	1327
PaeR7I	CTCGAG	1 cut(s)	728
PagI	TCATGA	1 cut(s)	2302
PciI	ACATGT	1 cut(s)	1450
PciSI	GCTCTTC	2 cut(s)	1201, 2236
PctI	GAATGC	2 cut(s)	507, 2015
PdmI	GAANNNNTTC	1 cut(s)	1333
PfeI	GAWTC	5 cut(s)	201, 271, 385, 560, 1175
PflFI	GACNNNGTC	1 cut(s)	1988
PflMI	CCANNNNNTGG	2 cut(s)	1231, 1858
PfoI	TCCNGGA	1 cut(s)	1038
PkrI	GCNGC	7 cut(s)	197, 540, 1241, 1417, 1923, 2450, 2877
PleI	GAGTC	3 cut(s)	136, 423, 1837
PmaCI	CACGTG	1 cut(s)	811
PmlI	CACGTG	1 cut(s)	811
PpsI	GAGTC	3 cut(s)	136, 423, 1837
Ppu21I	YACGTR	3 cut(s)	811, 1995, 2432
PpuMI	RGGWCCY	2 cut(s)	1318, 2539
PscI	ACATGT	1 cut(s)	1450
PshBI	ATTAAT	1 cut(s)	1742
PsiI	TTATAA	3 cut(s)	783, 944, 2313
Psp5II	RGGWCCY	2 cut(s)	1318, 2539
Psp6I	CCWGG	4 cut(s)	48, 2351, 2962, 3007
PspCI	CACGTG	1 cut(s)	811
PspFI	CCCAGC	1 cut(s)	2341
PspGI	CCWGG	4 cut(s)	48, 2351, 2962, 3007
PspN4I	GGNNCC	3 cut(s)	1980, 2540, 2815
PspPI	GGNCC	3 cut(s)	878, 1318, 2539
PspPPI	RGGWCCY	2 cut(s)	1318, 2539
PspXI	VCTCGAGB	1 cut(s)	728
PstI	CTGCAG	2 cut(s)	1420, 2024
PstNI	CAGNNNCTG	1 cut(s)	2552
PsuI	RGATCY	2 cut(s)	857, 2248
PsyI	GACNNNGTC	1 cut(s)	1988
RsaI	GTAC	5 cut(s)	838, 1997, 2522, 2974, 3050
RsaNI	GTAC	5 cut(s)	837, 1996, 2521, 2973, 3049
RseI	CAYNNNNRTG	1 cut(s)	291
SapI	GCTCTTC	2 cut(s)	1201, 2236
SatI	GCNGC	7 cut(s)	196, 539, 1240, 1416, 1922, 2449, 2876
Sau3AI	GATC	6 cut(s)	56, 857, 901, 1633, 2248, 2299
Sau96I	GGNCC	3 cut(s)	878, 1318, 2539
SchI	GAGTC	3 cut(s)	136, 424, 1838
ScrFI	CCNGG	5 cut(s)	50, 1040, 2353, 2964, 3009
SduI	GDGCHC	2 cut(s)	727, 1113
SfcI	CTRYAG	3 cut(s)	1416, 2020, 2364
Sfr274I	CTCGAG	1 cut(s)	728
SfuI	TTCGAA	1 cut(s)	1327
SinI	GGWCC	2 cut(s)	1318, 2539
SlaI	CTCGAG	1 cut(s)	728
SmiMI	CAYNNNNRTG	1 cut(s)	291
SmlI	CTYRAG	5 cut(s)	412, 433, 728, 861, 1114
SmoI	CTYRAG	5 cut(s)	412, 433, 728, 861, 1114
SpeI	ACTAGT	2 cut(s)	35, 580
SsiI	CCGC	5 cut(s)	195, 373, 541, 1239, 1921
SspI	AATATT	3 cut(s)	1465, 2512, 2527
SspMI	CTAG	9 cut(s)	36, 360, 581, 608, 1200, 1244, 2724, 2781, 3003
StyD4I	CCNGG	5 cut(s)	48, 1038, 2351, 2962, 3007
TaiI	ACGT	4 cut(s)	813, 1997, 2434, 2522
TaqI	TCGA	4 cut(s)	55, 729, 1327, 2298
TatI	WGTACW	2 cut(s)	836, 3048
TauI	GCSGC	3 cut(s)	198, 1242, 1924
TfiI	GAWTC	5 cut(s)	201, 271, 385, 560, 1175
TscAI	CASTG	5 cut(s)	298, 429, 652, 1273, 2041
TseFI	GTSAC	3 cut(s)	806, 1990, 2030
TseI	GCWGC	4 cut(s)	538, 1415, 2448, 2875
Tsp45I	GTSAC	3 cut(s)	806, 1990, 2030
TspGWI	ACGGA	1 cut(s)	1735
TspRI	CASTG	5 cut(s)	298, 429, 652, 1273, 2041
Tth111I	GACNNNGTC	1 cut(s)	1988
Van91I	CCANNNNNTGG	2 cut(s)	1231, 1858
Vha464I	CTTAAG	2 cut(s)	433, 1114
VneI	GTGCAC	1 cut(s)	723
VpaK11BI	GGWCC	2 cut(s)	1318, 2539
VspI	ATTAAT	1 cut(s)	1742
XapI	RAATTY	3 cut(s)	925, 1622, 2089
XceI	RCATGY	1 cut(s)	1454
XhoI	CTCGAG	1 cut(s)	728
XmiI	GTMKAC	1 cut(s)	612
XmnI	GAANNNNTTC	1 cut(s)	1333
XspI	CTAG	9 cut(s)	36, 360, 581, 608, 1200, 1244, 2724, 2781, 3003
Zsp2I	ATGCAT	1 cut(s)	2268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.