SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11050 AT5G58850 |
| fragaria_vesca | FvH4_3g38310 FvH4_3g38320 |
| malus_domestica | MD03G1073100.v1.1 MD11G1079000.v1.1 |
| prunus_persica | Prupe.6G059700_v2.0.a1 |
| pyrus_communis | pycom03g05910 |
| rosa_chinensis | RchiOBHm_Chr5g0068891 RchiOBHm_Chr7g0211831 |
| rosa_laevigata | RLG00000002962 RLG00000036017 |
| rosa_multiflora | Rmu_sc0009005.1_g000013 Rmu_sc0013825.1_g000001 Rmu_sc0016160.1_g000005 Rmu_ssc0000378.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00011840 Rroxscaffold_3G00247400 |
| rosa_rugosa | Rorug05G0394200 Rorug07G0129000 |
| rosa_samantha | Rh5AG451300 Rh5BG470000 Rh5CG492500 Rh5DG483100 Rh7AG261700 Rh7BG255300 Rh7CG278300 Rh7DG268300 |
| rosa_wichuraiana | Rw5G042150 Rw7G022320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1520 |
| AccB1I | GGYRCC | 1 cut(s) | 1520 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 321 |
| AccII | CGCG | 2 cut(s) | 1282, 1373 |
| AciI | CCGC | 3 cut(s) | 254, 1280, 1371 |
| AclWI | GGATC | 3 cut(s) | 787, 1278, 1479 |
| AcoI | YGGCCR | 1 cut(s) | 251 |
| AcsI | RAATTY | 4 cut(s) | 336, 739, 841, 1264 |
| AcuI | CTGAAG | 2 cut(s) | 94, 627 |
| AfaI | GTAC | 2 cut(s) | 1211, 1522 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 141, 198, 321, 352, 353 |
| AflIII | ACRYGT | 1 cut(s) | 1206 |
| AjnI | CCWGG | 2 cut(s) | 115, 939 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1208, 1221, 1240, 1253, 1403, 1435 |
| Alw26I | GTCTC | 4 cut(s) | 159, 175, 193, 269 |
| AlwI | GGATC | 3 cut(s) | 787, 1278, 1479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1448 |
| AoxI | GGCC | 5 cut(s) | 113, 251, 312, 323, 1144 |
| ApeKI | GCWGC | 6 cut(s) | 20, 1108, 1111, 1114, 1232, 1442 |
| ApoI | RAATTY | 4 cut(s) | 336, 739, 841, 1264 |
| AseI | ATTAAT | 1 cut(s) | 1290 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1073 |
| Asp718I | GGTACC | 1 cut(s) | 1520 |
| AspLEI | GCGC | 1 cut(s) | 579 |
| AspS9I | GGNCC | 2 cut(s) | 119, 982 |
| AsuC2I | CCSGG | 1 cut(s) | 684 |
| AsuHPI | GGTGA | 6 cut(s) | 29, 239, 320, 493, 928, 1435 |
| AsuII | TTCGAA | 1 cut(s) | 245 |
| AsuNHI | GCTAGC | 1 cut(s) | 275 |
| AvaII | GGWCC | 2 cut(s) | 119, 982 |
| BaeGI | GKGCMC | 1 cut(s) | 511 |
| BanI | GGYRCC | 1 cut(s) | 1520 |
| BbsI | GAAGAC | 3 cut(s) | 465, 1281, 1491 |
| BbvCI | CCTCAGC | 1 cut(s) | 642 |
| BbvI | GCAGC | 6 cut(s) | 7, 1120, 1123, 1126, 1244, 1454 |
| BccI | CCATC | 7 cut(s) | 8, 48, 994, 1133, 1314, 1462, 1477 |
| BciT130I | CCWGG | 2 cut(s) | 117, 941 |
| BciVI | GTATCC | 1 cut(s) | 1159 |
| BclI | TGATCA | 3 cut(s) | 28, 301, 1381 |
| BcnI | CCSGG | 1 cut(s) | 684 |
| BcoDI | GTCTC | 4 cut(s) | 159, 175, 193, 269 |
| BfaI | CTAG | 3 cut(s) | 276, 999, 1533 |
| BfmI | CTRYAG | 3 cut(s) | 233, 1039, 1269 |
| BfuI | GTATCC | 1 cut(s) | 1159 |
| BisI | GCNGC | 7 cut(s) | 21, 254, 1109, 1112, 1115, 1233, 1443 |
| BlsI | GCNGC | 7 cut(s) | 22, 255, 1110, 1113, 1116, 1234, 1444 |
| Bme1390I | CCNGG | 3 cut(s) | 117, 684, 941 |
| Bme18I | GGWCC | 2 cut(s) | 119, 982 |
| BmgT120I | GGNCC | 2 cut(s) | 119, 982 |
| BmiI | GGNNCC | 5 cut(s) | 146, 653, 984, 1351, 1522 |
| BmrFI | CCNGG | 3 cut(s) | 117, 684, 941 |
| BmrI | ACTGGG | 1 cut(s) | 1305 |
| BmsI | GCATC | 2 cut(s) | 103, 757 |
| BmtI | GCTAGC | 1 cut(s) | 279 |
| BmuI | ACTGGG | 1 cut(s) | 1305 |
| BpiI | GAAGAC | 3 cut(s) | 465, 1281, 1491 |
| BpmI | CTGGAG | 1 cut(s) | 312 |
| Bpu10I | CCTNAGC | 1 cut(s) | 642 |
| Bpu14I | TTCGAA | 1 cut(s) | 245 |
| BpuEI | CTTGAG | 1 cut(s) | 1500 |
| BpuMI | CCSGG | 1 cut(s) | 684 |
| BsaBI | GATNNNNATC | 1 cut(s) | 784 |
| BsaI | GGTCTC | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 1 cut(s) | 939 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 310, 340, 1177, 1207 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 141, 198, 321, 352, 353 |
| Bse1I | ACTGG | 2 cut(s) | 1311, 1353 |
| Bse3DI | GCAATG | 2 cut(s) | 228, 554 |
| Bse8I | GATNNNNATC | 1 cut(s) | 784 |
| BseBI | CCWGG | 2 cut(s) | 117, 941 |
| BseDI | CCNNGG | 1 cut(s) | 939 |
| BseGI | GGATG | 2 cut(s) | 289, 1306 |
| BseJI | GATNNNNATC | 1 cut(s) | 784 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 141, 198, 321, 352, 353 |
| BseMI | GCAATG | 2 cut(s) | 228, 554 |
| BseMII | CTCAG | 4 cut(s) | 280, 510, 633, 1520 |
| BseNI | ACTGG | 2 cut(s) | 1311, 1353 |
| BseRI | GAGGAG | 5 cut(s) | 75, 181, 792, 916, 1362 |
| BseSI | GKGCMC | 1 cut(s) | 511 |
| BseXI | GCAGC | 6 cut(s) | 7, 1120, 1123, 1126, 1244, 1454 |
| BseYI | CCCAGC | 1 cut(s) | 539 |
| Bsh1236I | CGCG | 2 cut(s) | 1282, 1373 |
| BshFI | GGCC | 5 cut(s) | 115, 253, 314, 325, 1146 |
| BshNI | GGYRCC | 1 cut(s) | 1520 |
| BsiSI | CCGG | 1 cut(s) | 683 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 141, 198, 321, 352, 353 |
| BsmAI | GTCTC | 4 cut(s) | 159, 175, 193, 269 |
| BsmBI | CGTCTC | 1 cut(s) | 193 |
| BsmI | GAATGC | 2 cut(s) | 678, 724 |
| BsnI | GGCC | 5 cut(s) | 115, 253, 314, 325, 1146 |
| Bso31I | GGTCTC | 1 cut(s) | 159 |
| Bsp119I | TTCGAA | 1 cut(s) | 245 |
| Bsp1286I | GDGCHC | 1 cut(s) | 511 |
| Bsp1407I | TGTACA | 1 cut(s) | 1209 |
| Bsp143I | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| BspACI | CCGC | 3 cut(s) | 254, 1280, 1371 |
| BspANI | GGCC | 5 cut(s) | 115, 253, 314, 325, 1146 |
| BspCNI | CTCAG | 4 cut(s) | 279, 511, 634, 1519 |
| BspFNI | CGCG | 2 cut(s) | 1282, 1373 |
| BspHI | TCATGA | 1 cut(s) | 1378 |
| BspLI | GGNNCC | 5 cut(s) | 146, 653, 984, 1351, 1522 |
| BspMAI | CTGCAG | 1 cut(s) | 237 |
| BspOI | GCTAGC | 1 cut(s) | 279 |
| BspPI | GGATC | 3 cut(s) | 787, 1278, 1479 |
| BspT104I | TTCGAA | 1 cut(s) | 245 |
| BspT107I | GGYRCC | 1 cut(s) | 1520 |
| BspTNI | GGTCTC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 2 cut(s) | 228, 554 |
| BsrGI | TGTACA | 1 cut(s) | 1209 |
| BsrI | ACTGG | 2 cut(s) | 1311, 1353 |
| BssECI | CCNNGG | 1 cut(s) | 939 |
| BssMI | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| Bst2UI | CCWGG | 2 cut(s) | 117, 941 |
| Bst4CI | ACNGT | 3 cut(s) | 444, 656, 1043 |
| Bst6I | CTCTTC | 5 cut(s) | 113, 603, 609, 874, 1064 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 668, 1448 |
| BstAUI | TGTACA | 1 cut(s) | 1209 |
| BstBI | TTCGAA | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 1 cut(s) | 277 |
| BstDEI | CTNAG | 4 cut(s) | 266, 519, 642, 1506 |
| BstF5I | GGATG | 2 cut(s) | 289, 1306 |
| BstFNI | CGCG | 2 cut(s) | 1282, 1373 |
| BstHHI | GCGC | 1 cut(s) | 579 |
| BstKTI | GATC | 9 cut(s) | 31, 232, 304, 370, 782, 1286, 1321, 1384, 1474 |
| BstMAI | GTCTC | 4 cut(s) | 159, 175, 193, 269 |
| BstMBI | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 515, 668, 903, 1114, 1448 |
| BstNI | CCWGG | 2 cut(s) | 117, 941 |
| BstNSI | RCATGY | 1 cut(s) | 1210 |
| BstSCI | CCNGG | 3 cut(s) | 115, 682, 939 |
| BstSFI | CTRYAG | 3 cut(s) | 233, 1039, 1269 |
| BstSLI | GKGCMC | 1 cut(s) | 511 |
| BstUI | CGCG | 2 cut(s) | 1282, 1373 |
| BstV1I | GCAGC | 6 cut(s) | 7, 1120, 1123, 1126, 1244, 1454 |
| BstV2I | GAAGAC | 3 cut(s) | 465, 1281, 1491 |
| BstX2I | RGATCY | 1 cut(s) | 1471 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 47 |
| BstYI | RGATCY | 1 cut(s) | 1471 |
| BsuI | GTATCC | 1 cut(s) | 1159 |
| BsuRI | GGCC | 5 cut(s) | 115, 253, 314, 325, 1146 |
| BtsCI | GGATG | 2 cut(s) | 289, 1306 |
| BtsIMutI | CAGTG | 2 cut(s) | 449, 1048 |
| Cac8I | GCNNGC | 1 cut(s) | 277 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1448 |
| CciI | TCATGA | 1 cut(s) | 1378 |
| CfoI | GCGC | 1 cut(s) | 579 |
| Cfr13I | GGNCC | 2 cut(s) | 119, 982 |
| Csp6I | GTAC | 2 cut(s) | 1210, 1521 |
| CviAII | CATG | 9 cut(s) | 47, 305, 316, 352, 638, 1063, 1207, 1379, 1408 |
| CviQI | GTAC | 2 cut(s) | 1210, 1521 |
| DdeI | CTNAG | 4 cut(s) | 266, 519, 642, 1506 |
| DpnI | GATC | 9 cut(s) | 30, 231, 303, 369, 781, 1285, 1320, 1383, 1473 |
| DpnII | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| EaeI | YGGCCR | 1 cut(s) | 251 |
| Eam1104I | CTCTTC | 5 cut(s) | 113, 603, 609, 874, 1064 |
| EarI | CTCTTC | 5 cut(s) | 113, 603, 609, 874, 1064 |
| Eco147I | AGGCCT | 1 cut(s) | 115 |
| Eco31I | GGTCTC | 1 cut(s) | 159 |
| Eco32I | GATATC | 1 cut(s) | 586 |
| Eco47I | GGWCC | 2 cut(s) | 119, 982 |
| Eco57I | CTGAAG | 2 cut(s) | 94, 627 |
| EcoRI | GAATTC | 2 cut(s) | 739, 1264 |
| EcoRII | CCWGG | 2 cut(s) | 115, 939 |
| EcoRV | GATATC | 1 cut(s) | 586 |
| Esp3I | CGTCTC | 1 cut(s) | 193 |
| FaeI | CATG | 9 cut(s) | 50, 308, 319, 355, 641, 1066, 1210, 1382, 1411 |
| FatI | CATG | 9 cut(s) | 46, 304, 315, 351, 637, 1062, 1206, 1378, 1407 |
| FauI | CCCGC | 1 cut(s) | 1287 |
| FauNDI | CATATG | 1 cut(s) | 1389 |
| FbaI | TGATCA | 3 cut(s) | 28, 301, 1381 |
| Fnu4HI | GCNGC | 7 cut(s) | 21, 254, 1109, 1112, 1115, 1233, 1443 |
| FokI | GGATG | 2 cut(s) | 296, 1293 |
| Fsp4HI | GCNGC | 7 cut(s) | 21, 254, 1109, 1112, 1115, 1233, 1443 |
| FspBI | CTAG | 3 cut(s) | 276, 999, 1533 |
| GlaI | GCGC | 1 cut(s) | 578 |
| GluI | GCNGC | 7 cut(s) | 21, 254, 1109, 1112, 1115, 1233, 1443 |
| GsaI | CCCAGC | 1 cut(s) | 543 |
| GsuI | CTGGAG | 1 cut(s) | 312 |
| HaeIII | GGCC | 5 cut(s) | 115, 253, 314, 325, 1146 |
| HapII | CCGG | 1 cut(s) | 683 |
| HhaI | GCGC | 1 cut(s) | 579 |
| Hin1II | CATG | 9 cut(s) | 50, 308, 319, 355, 641, 1066, 1210, 1382, 1411 |
| Hin6I | GCGC | 1 cut(s) | 577 |
| HinP1I | GCGC | 1 cut(s) | 577 |
| HincII | GTYRAC | 1 cut(s) | 129 |
| HindII | GTYRAC | 1 cut(s) | 129 |
| HindIII | AAGCTT | 1 cut(s) | 524 |
| HinfI | GANTC | 6 cut(s) | 183, 709, 1034, 1250, 1375, 1426 |
| HpaII | CCGG | 1 cut(s) | 683 |
| HphI | GGTGA | 6 cut(s) | 29, 239, 320, 493, 928, 1435 |
| Hpy166II | GTNNAC | 6 cut(s) | 129, 447, 1007, 1093, 1212, 1240 |
| Hpy188I | TCNGA | 6 cut(s) | 28, 269, 982, 991, 1318, 1476 |
| Hpy188III | TCNNGA | 5 cut(s) | 299, 329, 589, 1261, 1379 |
| Hpy8I | GTNNAC | 6 cut(s) | 129, 447, 1007, 1093, 1212, 1240 |
| HpyAV | CCTTC | 4 cut(s) | 370, 819, 960, 973 |
| HpyCH4III | ACNGT | 3 cut(s) | 444, 656, 1043 |
| HpyCH4V | TGCA | 6 cut(s) | 167, 221, 235, 1066, 1154, 1451 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 515, 668, 903, 1114, 1448 |
| HpyF3I | CTNAG | 4 cut(s) | 266, 519, 642, 1506 |
| Hsp92II | CATG | 9 cut(s) | 50, 308, 319, 355, 641, 1066, 1210, 1382, 1411 |
| HspAI | GCGC | 1 cut(s) | 577 |
| KpnI | GGTACC | 1 cut(s) | 1524 |
| Ksp22I | TGATCA | 3 cut(s) | 28, 301, 1381 |
| Kzo9I | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| LmnI | GCTCC | 2 cut(s) | 929, 1349 |
| Lsp1109I | GCAGC | 6 cut(s) | 7, 1120, 1123, 1126, 1244, 1454 |
| LweI | GCATC | 2 cut(s) | 103, 757 |
| MaeI | CTAG | 3 cut(s) | 276, 999, 1533 |
| MaeIII | GTNAC | 1 cut(s) | 1183 |
| MalI | GATC | 9 cut(s) | 30, 231, 303, 369, 781, 1285, 1320, 1383, 1473 |
| MboI | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| MflI | RGATCY | 1 cut(s) | 1471 |
| MhlI | GDGCHC | 1 cut(s) | 511 |
| MluCI | AATT | 7 cut(s) | 247, 336, 739, 841, 1132, 1264, 1396 |
| MlyI | GAGTC | 1 cut(s) | 177 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1073 |
| MseI | TTAA | 3 cut(s) | 431, 1290, 1340 |
| MslI | CAYNNNNRTG | 3 cut(s) | 45, 48, 717 |
| MspA1I | CMGCKG | 2 cut(s) | 1031, 1235 |
| MspI | CCGG | 1 cut(s) | 683 |
| MspR9I | CCNGG | 3 cut(s) | 117, 684, 941 |
| Mva1269I | GAATGC | 2 cut(s) | 678, 724 |
| MvaI | CCWGG | 2 cut(s) | 117, 941 |
| MvnI | CGCG | 2 cut(s) | 1282, 1373 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 515, 668, 903, 1114, 1448 |
| NciI | CCSGG | 1 cut(s) | 684 |
| NdeI | CATATG | 1 cut(s) | 1389 |
| NdeII | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| NheI | GCTAGC | 1 cut(s) | 275 |
| NlaIII | CATG | 9 cut(s) | 50, 308, 319, 355, 641, 1066, 1210, 1382, 1411 |
| NlaIV | GGNNCC | 5 cut(s) | 146, 653, 984, 1351, 1522 |
| NmeAIII | GCCGAG | 1 cut(s) | 282 |
| NmuCI | GTSAC | 1 cut(s) | 1183 |
| NspI | RCATGY | 1 cut(s) | 1210 |
| NspV | TTCGAA | 1 cut(s) | 245 |
| PagI | TCATGA | 1 cut(s) | 1378 |
| PceI | AGGCCT | 1 cut(s) | 115 |
| PciI | ACATGT | 1 cut(s) | 1206 |
| PctI | GAATGC | 2 cut(s) | 678, 724 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1073 |
| PfeI | GAWTC | 5 cut(s) | 709, 1034, 1250, 1375, 1426 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 321 |
| PfoI | TCCNGGA | 1 cut(s) | 682 |
| PkrI | GCNGC | 7 cut(s) | 22, 255, 1110, 1113, 1116, 1234, 1444 |
| PleI | GAGTC | 1 cut(s) | 177 |
| PpsI | GAGTC | 1 cut(s) | 177 |
| PscI | ACATGT | 1 cut(s) | 1206 |
| PshBI | ATTAAT | 1 cut(s) | 1290 |
| Psp6I | CCWGG | 2 cut(s) | 115, 939 |
| PspFI | CCCAGC | 1 cut(s) | 539 |
| PspGI | CCWGG | 2 cut(s) | 115, 939 |
| PspN4I | GGNNCC | 5 cut(s) | 146, 653, 984, 1351, 1522 |
| PspPI | GGNCC | 2 cut(s) | 119, 982 |
| PstI | CTGCAG | 1 cut(s) | 237 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1448 |
| PsuI | RGATCY | 1 cut(s) | 1471 |
| PvuII | CAGCTG | 2 cut(s) | 1031, 1235 |
| RsaI | GTAC | 2 cut(s) | 1211, 1522 |
| RsaNI | GTAC | 2 cut(s) | 1210, 1521 |
| RseI | CAYNNNNRTG | 3 cut(s) | 45, 48, 717 |
| SaqAI | TTAA | 3 cut(s) | 431, 1290, 1340 |
| SatI | GCNGC | 7 cut(s) | 21, 254, 1109, 1112, 1115, 1233, 1443 |
| Sau3AI | GATC | 9 cut(s) | 28, 229, 301, 367, 779, 1283, 1318, 1381, 1471 |
| Sau96I | GGNCC | 2 cut(s) | 119, 982 |
| SchI | GAGTC | 1 cut(s) | 177 |
| ScrFI | CCNGG | 3 cut(s) | 117, 684, 941 |
| SduI | GDGCHC | 1 cut(s) | 511 |
| SfaNI | GCATC | 2 cut(s) | 103, 757 |
| SfcI | CTRYAG | 3 cut(s) | 233, 1039, 1269 |
| SfuI | TTCGAA | 1 cut(s) | 245 |
| SinI | GGWCC | 2 cut(s) | 119, 982 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 45, 48, 717 |
| SmlI | CTYRAG | 1 cut(s) | 1515 |
| SmoI | CTYRAG | 1 cut(s) | 1515 |
| Sse9I | AATT | 7 cut(s) | 247, 336, 739, 841, 1132, 1264, 1396 |
| SseBI | AGGCCT | 1 cut(s) | 115 |
| SsiI | CCGC | 3 cut(s) | 254, 1280, 1371 |
| SspMI | CTAG | 3 cut(s) | 276, 999, 1533 |
| StuI | AGGCCT | 1 cut(s) | 115 |
| StyD4I | CCNGG | 3 cut(s) | 115, 682, 939 |
| TaaI | ACNGT | 3 cut(s) | 444, 656, 1043 |
| TaqI | TCGA | 2 cut(s) | 245, 1128 |
| TasI | AATT | 7 cut(s) | 247, 336, 739, 841, 1132, 1264, 1396 |
| TatI | WGTACW | 1 cut(s) | 1209 |
| TauI | GCSGC | 1 cut(s) | 256 |
| TfiI | GAWTC | 5 cut(s) | 709, 1034, 1250, 1375, 1426 |
| Tru1I | TTAA | 3 cut(s) | 431, 1290, 1340 |
| Tru9I | TTAA | 3 cut(s) | 431, 1290, 1340 |
| TscAI | CASTG | 2 cut(s) | 449, 1048 |
| TseFI | GTSAC | 1 cut(s) | 1183 |
| TseI | GCWGC | 6 cut(s) | 20, 1108, 1111, 1114, 1232, 1442 |
| Tsp45I | GTSAC | 1 cut(s) | 1183 |
| TspDTI | ATGAA | 7 cut(s) | 300, 408, 468, 1051, 1347, 1418, 1424 |
| TspGWI | ACGGA | 1 cut(s) | 114 |
| TspRI | CASTG | 2 cut(s) | 449, 1048 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 321 |
| VpaK11BI | GGWCC | 2 cut(s) | 119, 982 |
| VspI | ATTAAT | 1 cut(s) | 1290 |
| XapI | RAATTY | 4 cut(s) | 336, 739, 841, 1264 |
| XceI | RCATGY | 1 cut(s) | 1210 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1073 |
| XspI | CTAG | 3 cut(s) | 276, 999, 1533 |