Rroxscaffold_1G00007200

divergent subfamily of APPLE domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0004100
Physical Location & Seq
Forward (+)
9249225 .. 9252150
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00007200.1

Sequence Viewer

Length: 2073 bp
ATGAGATCTTTAGCAAAGAACACCATTCTTCTTCTCCTGACTTTACTCTCTTTCTTCTCCATTGCCAAATCCAAAGACACCTTATCTGCAACTGAATCGCTCGGAACAGGCCTCGTCTCTGCCGGCGAGGTTTTCGAGTTGGATTTTTTCAACCCTGGCAGACACTCAAGATGGTACTTGGGCATATGGTACATGAAAATCAAAGAAAGAACAGTTGTTTGGGTGGCCAACAGAGACAATCCGCTCCCAAACAACTCAGCCAGTCTCAAAATCGGATACGACGGAATAATTTCTCTTGTGGATGAATCCGGAAAAGTTTCTTGGATGTCAAGCAATCAATCACAATTTGTTAAAAATCCAATCCTTCAGCTTTTGGATTCCGGCAACTTGGTCCTCAAAGAAGCAAATGAAACCAACCCTAACGAGTTCCTCTGGCAGAGCTTCGACTACCCTACACACACTTTGTTGCCGGAGATGAAACTCGGAAGGAACTCGAATACCGGATTGGATAGATACATAACCTCGTGGAAAACTCCACAAGACCCTTCTACTGGTGATTACTCCTTCAAGCTCGACTACCGCGGTTTCCCGGAGGCTTTCCTCCGGCAGAGACAGTCGATAAGGTACCGGAGTGGCCCCTGGAACGGGTTGAGATTTAGCGGGGCTCCGGAGATGAACACCGCTAGCTCTAATGGTATTGGTTTCAACTTCGTTGTAAACAATGAGGAGATGTACTACTCTTTTTCGGAAACTAATCCAGCTCTGTATTCACGGCTGATTGTATCTCCCTTCGGCAACATCCAACGGCTGACGTGGATCGAGAGCCGCAAGACCTGGAGCCAGTGCTGGTACCTTCCCGGGGACCCATGCGACACGTACAGCGAGTGCGGGGCCTATGGTGTCTGCGACGCCAACGATGCTTTGCCGGTGTGTAAGTGCATGAGGGGATTCCGACCTAAGAACCCTTCTGCATGGAGCTTGAGAGATGGCACCGAAGGATGTGAACGTCAGACGGAGCTGGAGTGTGGGAGTAAGGACAAGTTTATGAAGGTGGAGAATTTGAAGCTGCCGGAGAGCGGCGGAGCGGTGGTGGATATGGACATGAGTTTGGAGGAGTGTGAGGTGAAGTGTTTGGGGAATTGCTCGTGTAGTGGGTTTTCGAGTGCGAGGATTGAGAAAGGAGGGAGTGGATGTGTGATGTGGTTTGGGAAGTTGATGGATATGAGGAGTTATGCTGGCGACAGCGGCCAAGAGTTCTATCTCCGATTAGCAGCTTCTGAACTAGATGGTGATGGGAAAACAAAACGCATAGTTATGAGCGTAGGCATTGTAGTTGGTATTGCCGTTCTGCTATCAGCTGGTCTTATTATCTGGTTCGTGCGGAGGAGGAGGAACTCGGGTAGCACCCTGAGGAGAGAATCAAAAGGTCCTCTTGAAAGAATTCGAAGCCAGGATTTTCTTCTAAACAGTGTGTTAGTCTCAAGTAAGAAGGAGCACTACTCTGGTGACAGAAGCAATGATGACCTAGAGTTACCATTGTTTGATTTTACCTCTATAGCAGCGGCTACGGAGAACTTTTCTGATGAAAATAAACTGGGAGAAGGTGGTTTTGGTTGTGTTTACAAGGGGTTTGTCGAAGGTCAAGAGATAGCTGTGAAGAGACTTTCAAAGAACTCTGGACAAGGAACCAAAGAATTCAAAAACGAAGTGAAGTTAATTGCAAGGCTTCAACACAGAAATCTTGTTCGACTGCTTGGTTGCTGTGTTGATGCGGATGAAAAGATGCTGATTTACGAATACATGGAAAATAAAAGCCTCGATTCCTTTTTATTCGATAAAGGAAAAAGGTATTTGCTGGATTGGCAAAAGCGTTTCAACATTATCTGTGGGATTGCTCGAGGGCTTCTTTATCTTCACCAGGATTCGAGATTCAGAATTATCCATAGGGACCTCAAGGCAAGCAACATTCTACTAGATGGAGAATTGGACCCCAAGATATCGGACTTTGGAATGGCAAGACTATTCGGTCAGGATCAGACAGAAGCCAATACAAAAAAAGTAGTGGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

690

Amino Acids

77.67

Weight (kDa)

7.99

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 177 8.5e-37 D-mannose binding lectin
S_locus_glycop PF00954 209 - 321 3.1e-32 S-locus glycoprotein domain
PAN_2 PF08276 342 - 408 5.8e-20 PAN-like domain
DUF3660 PF12398 480 - 516 3.3e-08 Receptor serine/threonine kinase
Pkinase PF00069 527 - 690 7.5e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 529 - 683 2.7e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2025
Acc65I GGTACC 2 cut(s) 624, 849
AccB1I GGYRCC 3 cut(s) 624, 849, 989
AccBSI CCGCTC 3 cut(s) 244, 1077, 1085
AccII CGCG 1 cut(s) 582
AccIII TCCGGA 2 cut(s) 308, 667
AclWI GGATC 2 cut(s) 824, 2040
AcoI YGGCCR 2 cut(s) 225, 1246
AcsI RAATTY 3 cut(s) 1057, 1440, 1694
AcuI CTGAAG 1 cut(s) 350
AcyI GRCGYC 1 cut(s) 909
AfaI GTAC 6 cut(s) 176, 191, 626, 734, 851, 878
AfiI CCNNNNNNNGG 5 cut(s) 551, 644, 645, 859, 1076
AflIII ACRYGT 1 cut(s) 873
AgsI TTSAA 9 cut(s) 151, 568, 706, 1063, 1436, 1668, 1699, 1730, 1876
AjiI CACGTC 1 cut(s) 813
AjnI CCWGG 5 cut(s) 154, 638, 833, 1449, 1917
AjuI GAANNNNNNNTTGG 8 cut(s) 202, 234, 304, 336, 488, 520, 1593, 1625
Alw21I GWGCWC 1 cut(s) 1497
Alw26I GTCTC 6 cut(s) 121, 228, 269, 604, 1483, 1654
AlwI GGATC 2 cut(s) 824, 2040
AlwNI CAGNNNCTG 1 cut(s) 1277
Ama87I CYCGRG 3 cut(s) 857, 1396, 1896
Aor13HI TCCGGA 2 cut(s) 308, 667
AoxI GGCC 5 cut(s) 109, 225, 634, 891, 1246
ApeKI GCWGC 3 cut(s) 1066, 1271, 1559
ApoI RAATTY 3 cut(s) 1057, 1440, 1694
Asp700I GAANNNNTTC 3 cut(s) 289, 316, 1440
Asp718I GGTACC 2 cut(s) 624, 849
AspS9I GGNCC 7 cut(s) 391, 635, 862, 891, 1427, 1948, 1987
AsuC2I CCSGG 3 cut(s) 590, 858, 859
AsuHPI GGTGA 5 cut(s) 566, 1135, 1301, 1517, 1907
AsuII TTCGAA 1 cut(s) 1444
AsuNHI GCTAGC 1 cut(s) 683
AvaI CYCGRG 3 cut(s) 857, 1396, 1896
AvaII GGWCC 5 cut(s) 391, 862, 1427, 1948, 1987
AxyI CCTNAGG 1 cut(s) 1409
BaeI ACNNNNGTAYC 2 cut(s) 616, 649
BalI TGGCCA 1 cut(s) 227
BanI GGYRCC 3 cut(s) 624, 849, 989
BanII GRGCYC 1 cut(s) 667
BarI GAAGNNNNNNTAC 2 cut(s) 1481, 1513
BauI CACGAG 2 cut(s) 523, 1144
Bbv12I GWGCWC 1 cut(s) 1497
BbvI GCAGC 3 cut(s) 1053, 1283, 1571
BccI CCATC 6 cut(s) 165, 980, 1210, 1280, 1286, 1970
BceAI ACGGC 3 cut(s) 788, 821, 1328
BcgI CGANNNNNNTGC 2 cut(s) 78, 112
BciT130I CCWGG 5 cut(s) 156, 640, 835, 1451, 1919
BciVI GTATCC 1 cut(s) 269
BcnI CCSGG 3 cut(s) 590, 858, 859
BcoDI GTCTC 6 cut(s) 121, 228, 269, 604, 1483, 1654
BfaI CTAG 4 cut(s) 684, 1283, 1526, 1973
BfmI CTRYAG 1 cut(s) 1554
BfuI GTATCC 1 cut(s) 269
BglII AGATCT 1 cut(s) 5
BisI GCNGC 7 cut(s) 826, 1067, 1078, 1246, 1272, 1560, 1563
BlsI GCNGC 7 cut(s) 827, 1068, 1079, 1247, 1273, 1561, 1564
Bme1390I CCNGG 8 cut(s) 156, 590, 640, 835, 858, 859, 1451, 1919
Bme18I GGWCC 5 cut(s) 391, 862, 1427, 1948, 1987
BmeT110I CYCGRG 3 cut(s) 857, 1396, 1896
BmgBI CACGTC 1 cut(s) 813
BmgT120I GGNCC 7 cut(s) 391, 635, 862, 891, 1427, 1948, 1987
BmrFI CCNGG 8 cut(s) 156, 590, 640, 835, 858, 859, 1451, 1919
BmrI ACTGGG 1 cut(s) 1604
BmsI GCATC 3 cut(s) 907, 1759, 1773
BmtI GCTAGC 1 cut(s) 687
BmuI ACTGGG 1 cut(s) 1604
BplI GAGNNNNNCTC 2 cut(s) 1484, 1516
BpmI CTGGAG 2 cut(s) 856, 1040
Bpu14I TTCGAA 1 cut(s) 1444
BpuEI CTTGAG 4 cut(s) 151, 1000, 1465, 1937
BpuMI CCSGG 3 cut(s) 590, 858, 859
BsaAI YACGTR 1 cut(s) 876
BsaHI GRCGYC 1 cut(s) 909
BsaJI CCNNGG 5 cut(s) 154, 580, 638, 857, 858
BsaWI WCCGGW 4 cut(s) 308, 500, 627, 667
BsaXI ACNNNNNCTCC 6 cut(s) 1007, 1037, 1074, 1104, 1177, 1207
Bsc4I CCNNNNNNNGG 5 cut(s) 551, 644, 645, 859, 1076
Bse118I RCCGGY 2 cut(s) 122, 925
Bse1I ACTGG 4 cut(s) 261, 556, 841, 1599
Bse21I CCTNAGG 1 cut(s) 1409
Bse3DI GCAATG 2 cut(s) 60, 1522
BseAI TCCGGA 2 cut(s) 308, 667
BseBI CCWGG 5 cut(s) 156, 640, 835, 1451, 1919
BseDI CCNNGG 5 cut(s) 154, 580, 638, 857, 858
BseGI GGATG 6 cut(s) 307, 330, 798, 1004, 1196, 1780
BseLI CCNNNNNNNGG 5 cut(s) 551, 644, 645, 859, 1076
BseMI GCAATG 2 cut(s) 60, 1522
BseMII CTCAG 2 cut(s) 270, 1400
BseNI ACTGG 4 cut(s) 261, 556, 841, 1599
BseRI GAGGAG 6 cut(s) 740, 1127, 1240, 1399, 1402, 1426
BseXI GCAGC 3 cut(s) 1053, 1283, 1571
Bsh1236I CGCG 1 cut(s) 582
BshFI GGCC 5 cut(s) 111, 227, 636, 893, 1248
BshNI GGYRCC 3 cut(s) 624, 849, 989
BsiHKAI GWGCWC 1 cut(s) 1497
BsiHKCI CYCGRG 3 cut(s) 857, 1396, 1896
BslFI GGGAC 2 cut(s) 875, 1961
BslI CCNNNNNNNGG 5 cut(s) 551, 644, 645, 859, 1076
BsmAI GTCTC 6 cut(s) 121, 228, 269, 604, 1483, 1654
BsmBI CGTCTC 1 cut(s) 121
BsmFI GGGAC 2 cut(s) 875, 1961
BsnI GGCC 5 cut(s) 111, 227, 636, 893, 1248
BsoBI CYCGRG 3 cut(s) 857, 1396, 1896
Bsp119I TTCGAA 1 cut(s) 1444
Bsp1286I GDGCHC 2 cut(s) 667, 1497
Bsp13I TCCGGA 2 cut(s) 308, 667
Bsp143I GATC 3 cut(s) 5, 816, 2032
BspANI GGCC 5 cut(s) 111, 227, 636, 893, 1248
BspCNI CTCAG 2 cut(s) 269, 1401
BspEI TCCGGA 2 cut(s) 308, 667
BspFNI CGCG 1 cut(s) 582
BspOI GCTAGC 1 cut(s) 687
BspPI GGATC 2 cut(s) 824, 2040
BspT104I TTCGAA 1 cut(s) 1444
BspT107I GGYRCC 3 cut(s) 624, 849, 989
BsrBI CCGCTC 3 cut(s) 244, 1077, 1085
BsrDI GCAATG 2 cut(s) 60, 1522
BsrFI RCCGGY 2 cut(s) 122, 925
BsrI ACTGG 4 cut(s) 261, 556, 841, 1599
BssAI RCCGGY 2 cut(s) 122, 925
BssECI CCNNGG 5 cut(s) 154, 580, 638, 857, 858
BssMI GATC 3 cut(s) 5, 816, 2032
BssNI GRCGYC 1 cut(s) 909
BssSI CACGAG 2 cut(s) 523, 1144
Bst2BI CACGAG 2 cut(s) 523, 1144
Bst2UI CCWGG 5 cut(s) 156, 640, 835, 1451, 1919
Bst4CI ACNGT 3 cut(s) 214, 615, 1469
Bst6I CTCTTC 1 cut(s) 1652
BstACI GRCGYC 1 cut(s) 909
BstBAI YACGTR 1 cut(s) 876
BstBI TTCGAA 1 cut(s) 1444
BstC8I GCNNGC 4 cut(s) 124, 685, 1237, 1960
BstDEI CTNAG 3 cut(s) 256, 957, 1409
BstDSI CCRYGG 1 cut(s) 580
BstF5I GGATG 6 cut(s) 307, 330, 798, 1004, 1196, 1780
BstFNI CGCG 1 cut(s) 582
BstKTI GATC 3 cut(s) 8, 819, 2035
BstMAI GTCTC 6 cut(s) 121, 228, 269, 604, 1483, 1654
BstMBI GATC 3 cut(s) 5, 816, 2032
BstMWI GCNNNNNNNGC 3 cut(s) 917, 1245, 1861
BstNI CCWGG 5 cut(s) 156, 640, 835, 1451, 1919
BstSCI CCNGG 8 cut(s) 154, 588, 638, 833, 856, 857, 1449, 1917
BstSFI CTRYAG 1 cut(s) 1554
BstUI CGCG 1 cut(s) 582
BstV1I GCAGC 3 cut(s) 1053, 1283, 1571
BstX2I RGATCY 1 cut(s) 5
BstYI RGATCY 1 cut(s) 5
Bsu36I CCTNAGG 1 cut(s) 1409
BsuI GTATCC 1 cut(s) 269
BsuRI GGCC 5 cut(s) 111, 227, 636, 893, 1248
BtgI CCRYGG 1 cut(s) 580
BtrI CACGTC 1 cut(s) 813
BtsCI GGATG 6 cut(s) 307, 330, 798, 1004, 1196, 1780
BtsIMutI CAGTG 2 cut(s) 848, 1474
Cac8I GCNNGC 4 cut(s) 124, 685, 1237, 1960
CaiI CAGNNNCTG 1 cut(s) 1277
Cfr10I RCCGGY 2 cut(s) 122, 925
Cfr13I GGNCC 7 cut(s) 391, 635, 862, 891, 1427, 1948, 1987
Cfr42I CCGCGG 1 cut(s) 583
Cfr9I CCCGGG 1 cut(s) 857
CseI GACGC 1 cut(s) 917
Csp6I GTAC 6 cut(s) 175, 190, 625, 733, 850, 877
CviAII CATG 6 cut(s) 193, 867, 940, 972, 1102, 1801
CviQI GTAC 6 cut(s) 175, 190, 625, 733, 850, 877
DdeI CTNAG 3 cut(s) 256, 957, 1409
DpnI GATC 3 cut(s) 7, 818, 2034
DpnII GATC 3 cut(s) 5, 816, 2032
DrdI GACNNNNNNGTC 1 cut(s) 2025
DseDI GACNNNNNNGTC 1 cut(s) 2025
EaeI YGGCCR 2 cut(s) 225, 1246
Eam1104I CTCTTC 1 cut(s) 1652
EarI CTCTTC 1 cut(s) 1652
EciI GGCGGA 1 cut(s) 1095
Eco147I AGGCCT 1 cut(s) 111
Eco24I GRGCYC 1 cut(s) 667
Eco32I GATATC 1 cut(s) 1998
Eco47I GGWCC 5 cut(s) 391, 862, 1427, 1948, 1987
Eco57I CTGAAG 1 cut(s) 350
Eco81I CCTNAGG 1 cut(s) 1409
Eco88I CYCGRG 3 cut(s) 857, 1396, 1896
EcoO109I RGGNCCY 4 cut(s) 862, 891, 1427, 1948
EcoRI GAATTC 2 cut(s) 1440, 1694
EcoRII CCWGG 5 cut(s) 154, 638, 833, 1449, 1917
EcoRV GATATC 1 cut(s) 1998
EcoT38I GRGCYC 1 cut(s) 667
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 6 cut(s) 196, 870, 943, 975, 1105, 1804
FalI AAGNNNNNCTT 2 cut(s) 1416, 1448
FaqI GGGAC 2 cut(s) 875, 1961
FatI CATG 6 cut(s) 192, 866, 939, 971, 1101, 1800
FauI CCCGC 2 cut(s) 653, 881
FauNDI CATATG 1 cut(s) 185
Fnu4HI GCNGC 7 cut(s) 826, 1067, 1078, 1246, 1272, 1560, 1563
FokI GGATG 6 cut(s) 314, 337, 785, 1011, 1203, 1787
FriOI GRGCYC 1 cut(s) 667
Fsp4HI GCNGC 7 cut(s) 826, 1067, 1078, 1246, 1272, 1560, 1563
FspBI CTAG 4 cut(s) 684, 1283, 1526, 1973
GluI GCNGC 7 cut(s) 826, 1067, 1078, 1246, 1272, 1560, 1563
GsuI CTGGAG 2 cut(s) 856, 1040
HaeIII GGCC 5 cut(s) 111, 227, 636, 893, 1248
HgaI GACGC 1 cut(s) 917
Hin1I GRCGYC 1 cut(s) 909
Hin1II CATG 6 cut(s) 196, 870, 943, 975, 1105, 1804
HinfI GANTC 8 cut(s) 95, 305, 377, 948, 1418, 1820, 1922, 1929
HphI GGTGA 5 cut(s) 566, 1135, 1301, 1517, 1907
Hpy166II GTNNAC 3 cut(s) 718, 1004, 1621
Hpy8I GTNNAC 3 cut(s) 718, 1004, 1621
Hpy99I CGWCG 2 cut(s) 284, 911
HpyCH4III ACNGT 3 cut(s) 214, 615, 1469
HpyCH4IV ACGT 3 cut(s) 812, 875, 1006
HpyCH4V TGCA 4 cut(s) 89, 939, 971, 1721
HpyF10VI GCNNNNNNNGC 3 cut(s) 917, 1245, 1861
HpyF3I CTNAG 3 cut(s) 256, 957, 1409
HpySE526I ACGT 3 cut(s) 812, 875, 1006
Hsp92I GRCGYC 1 cut(s) 909
Hsp92II CATG 6 cut(s) 196, 870, 943, 975, 1105, 1804
KflI GGGWCCC 1 cut(s) 862
Kpn2I TCCGGA 2 cut(s) 308, 667
KpnI GGTACC 2 cut(s) 628, 853
KroI GCCGGC 1 cut(s) 122
KroNI GCCGGC 1 cut(s) 124
KspI CCGCGG 1 cut(s) 583
Kzo9I GATC 3 cut(s) 5, 816, 2032
LmnI GCTCC 7 cut(s) 249, 670, 837, 975, 1015, 1082, 1492
Lsp1109I GCAGC 3 cut(s) 1053, 1283, 1571
LweI GCATC 3 cut(s) 907, 1759, 1773
MaeI CTAG 4 cut(s) 684, 1283, 1526, 1973
MaeII ACGT 3 cut(s) 812, 875, 1006
MaeIII GTNAC 2 cut(s) 1505, 1530
MalI GATC 3 cut(s) 7, 818, 2034
MbiI CCGCTC 3 cut(s) 244, 1077, 1085
MboI GATC 3 cut(s) 5, 816, 2032
MboII GAAGA 6 cut(s) 20, 23, 46, 1451, 1669, 1904
MflI RGATCY 1 cut(s) 5
MhlI GDGCHC 2 cut(s) 667, 1497
MlsI TGGCCA 1 cut(s) 227
MluCI AATT 9 cut(s) 288, 344, 1057, 1138, 1440, 1694, 1716, 1935, 1982
MluNI TGGCCA 1 cut(s) 227
MmeI TCCRAC 3 cut(s) 120, 826, 976
Mox20I TGGCCA 1 cut(s) 227
MroI TCCGGA 2 cut(s) 308, 667
MroNI GCCGGC 1 cut(s) 122
MroXI GAANNNNTTC 3 cut(s) 289, 316, 1440
MscI TGGCCA 1 cut(s) 227
MseI TTAA 2 cut(s) 351, 1715
MslI CAYNNNNRTG 1 cut(s) 1313
Msp20I TGGCCA 1 cut(s) 227
MspA1I CMGCKG 4 cut(s) 582, 1245, 1358, 1562
MspR9I CCNGG 8 cut(s) 156, 590, 640, 835, 858, 859, 1451, 1919
MvaI CCWGG 5 cut(s) 156, 640, 835, 1451, 1919
MvnI CGCG 1 cut(s) 582
MwoI GCNNNNNNNGC 3 cut(s) 917, 1245, 1861
NaeI GCCGGC 1 cut(s) 124
NciI CCSGG 3 cut(s) 590, 858, 859
NdeI CATATG 1 cut(s) 185
NdeII GATC 3 cut(s) 5, 816, 2032
NgoMIV GCCGGC 1 cut(s) 122
NheI GCTAGC 1 cut(s) 683
NlaIII CATG 6 cut(s) 196, 870, 943, 975, 1105, 1804
NmuCI GTSAC 1 cut(s) 1505
NspV TTCGAA 1 cut(s) 1444
PaeR7I CTCGAG 1 cut(s) 1896
PceI AGGCCT 1 cut(s) 111
PdiI GCCGGC 1 cut(s) 124
PdmI GAANNNNTTC 3 cut(s) 289, 316, 1440
PfeI GAWTC 8 cut(s) 95, 305, 377, 948, 1418, 1820, 1922, 1929
PfoI TCCNGGA 1 cut(s) 588
PkrI GCNGC 7 cut(s) 827, 1068, 1079, 1247, 1273, 1561, 1564
Ppu21I YACGTR 1 cut(s) 876
PpuMI RGGWCCY 3 cut(s) 862, 1427, 1948
Psp5II RGGWCCY 3 cut(s) 862, 1427, 1948
Psp6I CCWGG 5 cut(s) 154, 638, 833, 1449, 1917
PspGI CCWGG 5 cut(s) 154, 638, 833, 1449, 1917
PspPI GGNCC 7 cut(s) 391, 635, 862, 891, 1427, 1948, 1987
PspPPI RGGWCCY 3 cut(s) 862, 1427, 1948
PspXI VCTCGAGB 1 cut(s) 1896
PstNI CAGNNNCTG 1 cut(s) 1277
PsuI RGATCY 1 cut(s) 5
PvuII CAGCTG 1 cut(s) 1358
RsaI GTAC 6 cut(s) 176, 191, 626, 734, 851, 878
RsaNI GTAC 6 cut(s) 175, 190, 625, 733, 850, 877
RseI CAYNNNNRTG 1 cut(s) 1313
SacII CCGCGG 1 cut(s) 583
SaqAI TTAA 2 cut(s) 351, 1715
SatI GCNGC 7 cut(s) 826, 1067, 1078, 1246, 1272, 1560, 1563
Sau3AI GATC 3 cut(s) 5, 816, 2032
Sau96I GGNCC 7 cut(s) 391, 635, 862, 891, 1427, 1948, 1987
ScrFI CCNGG 8 cut(s) 156, 590, 640, 835, 858, 859, 1451, 1919
SduI GDGCHC 2 cut(s) 667, 1497
SfaNI GCATC 3 cut(s) 907, 1759, 1773
SfcI CTRYAG 1 cut(s) 1554
Sfr274I CTCGAG 1 cut(s) 1896
Sfr303I CCGCGG 1 cut(s) 583
SfuI TTCGAA 1 cut(s) 1444
SgrBI CCGCGG 1 cut(s) 583
SinI GGWCC 5 cut(s) 391, 862, 1427, 1948, 1987
SlaI CTCGAG 1 cut(s) 1896
SmaI CCCGGG 1 cut(s) 859
SmiMI CAYNNNNRTG 1 cut(s) 1313
SmlI CTYRAG 5 cut(s) 166, 979, 1480, 1896, 1952
SmoI CTYRAG 5 cut(s) 166, 979, 1480, 1896, 1952
Sse9I AATT 9 cut(s) 288, 344, 1057, 1138, 1440, 1694, 1716, 1935, 1982
SseBI AGGCCT 1 cut(s) 111
SspMI CTAG 4 cut(s) 684, 1283, 1526, 1973
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 8 cut(s) 154, 588, 638, 833, 856, 857, 1449, 1917
TaaI ACNGT 3 cut(s) 214, 615, 1469
TaiI ACGT 3 cut(s) 815, 878, 1009
TaqII GACCGA 1 cut(s) 2015
TasI AATT 9 cut(s) 288, 344, 1057, 1138, 1440, 1694, 1716, 1935, 1982
TatI WGTACW 1 cut(s) 732
TauI GCSGC 4 cut(s) 828, 1080, 1248, 1565
TfiI GAWTC 8 cut(s) 95, 305, 377, 948, 1418, 1820, 1922, 1929
Tru1I TTAA 2 cut(s) 351, 1715
Tru9I TTAA 2 cut(s) 351, 1715
TscAI CASTG 2 cut(s) 848, 1474
TseFI GTSAC 1 cut(s) 1505
TseI GCWGC 3 cut(s) 1066, 1271, 1559
Tsp45I GTSAC 1 cut(s) 1505
TspDTI ATGAA 8 cut(s) 209, 318, 423, 491, 689, 1061, 1599, 1791
TspGWI ACGGA 3 cut(s) 297, 1028, 1583
TspMI CCCGGG 1 cut(s) 857
TspRI CASTG 2 cut(s) 848, 1474
VpaK11BI GGWCC 5 cut(s) 391, 862, 1427, 1948, 1987
XapI RAATTY 3 cut(s) 1057, 1440, 1694
XhoI CTCGAG 1 cut(s) 1896
XmaI CCCGGG 1 cut(s) 857
XmnI GAANNNNTTC 3 cut(s) 289, 316, 1440
XspI CTAG 4 cut(s) 684, 1283, 1526, 1973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.