Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004110

Physical Location & Seq

Genomic Coordinates Forward (+)

83150149 .. 83157415

Gene Structure 7267 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCCACCGAGCTCAGAGAAGACCTTGATATGAACGACGCCGTTTACTCCGAGTATGACCTAGCTCTGCACGTCAAGGACGTTCTCGTTTCGTTCTCATCTGGAGATGTTGAATCTTCTGAAAACTACCGGAACCTGGTTGCGGTTCTGCACAGGAAGAAAAACCTCTCGCCTAGAGACGTAGCTGAGCTCGTGATTTTTAACATGAGCCTGTGGAACTATGGGCCGGAGGTGATGGATGCATTGATTGAATTGATTATTGCTTTGGCCACTTCAAGTGGGAAGTATCTTGATATATGCTTGGAGATGCTCGTATCCAATTTCGTGTCTCAGGATCCTTATATGCTGGATAAGTTGAAGGTGCCGCATGGTCTTAAAAAGAAGGATCAAGTTTTAACTCGTGTCCACAGATCTCTGAAAGTTATCTCTGATTTGTCACCTCTTTCCCCTAGAAATTTGCTGATACTAGTTTACCGTGGTCTAAATGGATATTATACCAGAAAAGGAACTAGTACTCTTGCTCTTGAGTTATACGTAGAGAACATGCTAAAGTCGGAGAGCGTTGGAAATTGGATCATTGAAGAATTCTCACAAGATCATGGACTATTTCAGATGGAGCTGGAACATCTTTATCTGAATGATGGTAGTGAGGTATTTGAAACTCTGCTCAAGTCATTTAAGAAGAATGTAATGACCGCATTCAAGTCAAAATTTGTCCAGTTTGTGATGTTCTATGCATGTGAACTCGATCCATCGACTGTGGTGAGAGATTTGCTTCCACGCTTGCAGAAATTTTGTATTCGCCCTCCGAACTCACACGTGTTAGTTGTTACTCATTTTGAGATGAGTGCTGTTGCTTATCTTGCTAGCTATCTGTCTTGTGCGAAGTTTATGTCAGACAGTGCTAAAAAGACCAAGTGGAAGATTTCATCCCTTGTGTCTCAAATGGGAAGAAATTTTCCATGCGGACAAATTTGGTGGATTGGTGTAACGAATTACGAATATGTCAAAGAGCAAGATGGTAAAATAAACCCAGAAACCCATGGAATATTTTATTCTACATGCCAGGATGCTCTGGAATCAGAATATTCATGGGCATGGGGTGGGAAGGAAGAGCTTCACAAGTTCTTCCCATTTGCCCCATCTCTGCTGATAAAAAGTGACAGATTCATCCGGCAGAATTTCATTTACTGGGACATGGTTCAACGTACTGATGAAGCAGACGAAGAAATTTCCAGCTGTGAAGATGTTGGTGAAGCCTTTGTGCGTGAAAATGAGGAGAATGAAATGGATTGTGAGGTTTTGCAGAGCTTGGAGGAACAACATTTTGGTGTTAATGAGGATTCCGTGCACCAACCTGTGCGAATGCCCTCGAGAATCAGACCGTCCATGAGTCCGGAGCCTGTATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRN3

Protein Analysis

470

Amino Acids

54.15

Weight (kDa)

5.12

Isoelectric Point (pI)

44.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRN3	PF05327	33 - 187	1e-14	RNA polymerase I specific transcription initiation factor RRN3
RRN3	PF05327	213 - 356	3.4e-19	RNA polymerase I specific transcription initiation factor RRN3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30590 AT1G30590 AT1G30590 AT2G34750 AT2G39240 AT2G39240
fragaria_vesca	FvH4_1g10010 FvH4_1g10010
malus_domestica	MD02G1108900.v1.1
prunus_persica	Prupe.7G186400_v2.0.a1 Prupe.7G186400_v2.0.a1
pyrus_communis	pycom02g08740 pycom15g20300
rosa_chinensis	RchiOBHm_Chr2g0096801 RchiOBHm_Chr2g0096841
rosa_laevigata	RLG00000016671 RLG00000016673
rosa_multiflora	Rmu_co8477279.1_g000001 Rmu_ssc0000215.1_g000029
rosa_roxburghii	Rroxscaffold_2G00145270 Rroxscaffold_2G00145300
rosa_rugosa	Rorug02G0061000 Rorug02G0061300
rosa_samantha	Rh2AG108400 Rh2AG108800 Rh2BG110500 Rh2BG110800 Rh2CG112400 Rh2CG112900 Rh2DG111800 Rh2DG112100
rosa_wichuraiana	Rw2G008380 Rw2G008420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	361
AccIII	TCCGGA	1 cut(s)	1396
AciI	CCGC	4 cut(s)	143, 365, 696, 966
AclWI	GGATC	5 cut(s)	329, 342, 393, 581, 743
AcoI	YGGCCR	2 cut(s)	3, 267
AcsI	RAATTY	8 cut(s)	454, 584, 710, 791, 955, 972, 1180, 1230
AcvI	CACGTG	1 cut(s)	820
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	2 cut(s)	514, 1210
AfiI	CCNNNNNNNGG	2 cut(s)	136, 142
AflIII	ACRYGT	2 cut(s)	817, 819
AgsI	TTSAA	8 cut(s)	113, 251, 276, 358, 581, 659, 703, 1205
AhlI	ACTAGT	2 cut(s)	466, 509
AjiI	CACGTC	1 cut(s)	73
AjnI	CCWGG	2 cut(s)	135, 1065
AjuI	GAANNNNNNNTTGG	2 cut(s)	1311, 1343
AluBI	AGCT	9 cut(s)	13, 65, 185, 190, 619, 870, 1117, 1239, 1311
AluI	AGCT	9 cut(s)	13, 65, 185, 190, 619, 870, 1117, 1239, 1311
Alw21I	GWGCWC	3 cut(s)	15, 192, 1353
Alw26I	GTCTC	3 cut(s)	171, 333, 945
Alw44I	GTGCAC	1 cut(s)	1349
AlwI	GGATC	5 cut(s)	329, 342, 393, 581, 743
Ama87I	CYCGRG	1 cut(s)	1372
Aor13HI	TCCGGA	1 cut(s)	1396
AoxI	GGCC	3 cut(s)	3, 224, 267
ApaLI	GTGCAC	1 cut(s)	1349
ApoI	RAATTY	8 cut(s)	454, 584, 710, 791, 955, 972, 1180, 1230
ArsI	GACNNNNNNTTYG	2 cut(s)	878, 910
Asp700I	GAANNNNTTC	1 cut(s)	1116
AspS9I	GGNCC	1 cut(s)	224
AsuHPI	GGTGA	4 cut(s)	244, 429, 775, 1265
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	1 cut(s)	1372
BaeGI	GKGCMC	1 cut(s)	1353
BalI	TGGCCA	2 cut(s)	5, 269
BamHI	GGATCC	1 cut(s)	334
BanI	GGYRCC	1 cut(s)	361
BanII	GRGCYC	2 cut(s)	15, 192
BauI	CACGAG	2 cut(s)	191, 399
BbrPI	CACGTG	1 cut(s)	820
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	3 cut(s)	15, 192, 1353
BccI	CCATC	6 cut(s)	229, 607, 635, 760, 1013, 1150
BceAI	ACGGC	1 cut(s)	26
BciT130I	CCWGG	2 cut(s)	137, 1067
BciVI	GTATCC	1 cut(s)	325
BcoDI	GTCTC	3 cut(s)	171, 333, 945
BcuI	ACTAGT	2 cut(s)	466, 509
BfaI	CTAG	6 cut(s)	62, 174, 450, 467, 510, 867
BfuI	GTATCC	1 cut(s)	325
BglII	AGATCT	1 cut(s)	410
BisI	GCNGC	1 cut(s)	365
BlpI	GCTNAGC	1 cut(s)	186
BlsI	GCNGC	1 cut(s)	366
BmcAI	AGTACT	1 cut(s)	514
Bme1390I	CCNGG	2 cut(s)	137, 1067
BmeT110I	CYCGRG	1 cut(s)	1372
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	1 cut(s)	224
BmiI	GGNNCC	4 cut(s)	134, 336, 363, 1401
BmrFI	CCNGG	2 cut(s)	137, 1067
BmrI	ACTGGG	1 cut(s)	1201
BmsI	GCATC	3 cut(s)	229, 297, 1060
BmtI	GCTAGC	1 cut(s)	870
BmuI	ACTGGG	1 cut(s)	1201
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	1 cut(s)	123
Bpu1102I	GCTNAGC	1 cut(s)	186
BpuEI	CTTGAG	2 cut(s)	545, 653
BsaAI	YACGTR	2 cut(s)	535, 820
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	2 cut(s)	475, 1042
BsaWI	WCCGGW	2 cut(s)	129, 1396
Bsc4I	CCNNNNNNNGG	2 cut(s)	136, 142
Bse1I	ACTGG	2 cut(s)	718, 1196
BseAI	TCCGGA	1 cut(s)	1396
BseBI	CCWGG	2 cut(s)	137, 1067
BseDI	CCNNGG	2 cut(s)	475, 1042
BseGI	GGATG	4 cut(s)	244, 929, 1075, 1170
BseLI	CCNNNNNNNGG	2 cut(s)	136, 142
BseMII	CTCAG	3 cut(s)	28, 177, 344
BseNI	ACTGG	2 cut(s)	718, 1196
BseRI	GAGGAG	1 cut(s)	1292
BseSI	GKGCMC	1 cut(s)	1353
BsgI	GTGCAG	2 cut(s)	53, 134
BshFI	GGCC	3 cut(s)	5, 226, 269
BshNI	GGYRCC	1 cut(s)	361
BsiHKAI	GWGCWC	3 cut(s)	15, 192, 1353
BsiHKCI	CYCGRG	1 cut(s)	1372
BsiSI	CCGG	4 cut(s)	130, 227, 1174, 1397
BslFI	GGGAC	1 cut(s)	1208
BslI	CCNNNNNNNGG	2 cut(s)	136, 142
BsmAI	GTCTC	3 cut(s)	171, 333, 945
BsmBI	CGTCTC	1 cut(s)	171
BsmFI	GGGAC	1 cut(s)	1208
BsmI	GAATGC	2 cut(s)	698, 1371
BsnI	GGCC	3 cut(s)	5, 226, 269
BsoBI	CYCGRG	1 cut(s)	1372
Bsp1286I	GDGCHC	3 cut(s)	15, 192, 1353
Bsp13I	TCCGGA	1 cut(s)	1396
Bsp143I	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
Bsp1720I	GCTNAGC	1 cut(s)	186
Bsp19I	CCATGG	1 cut(s)	1042
BspACI	CCGC	4 cut(s)	143, 365, 696, 966
BspANI	GGCC	3 cut(s)	5, 226, 269
BspCNI	CTCAG	3 cut(s)	27, 178, 343
BspEI	TCCGGA	1 cut(s)	1396
BspLI	GGNNCC	4 cut(s)	134, 336, 363, 1401
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	5 cut(s)	329, 342, 393, 581, 743
BspQI	GCTCTTC	1 cut(s)	1107
BspT107I	GGYRCC	1 cut(s)	361
BsrI	ACTGG	2 cut(s)	718, 1196
BssECI	CCNNGG	2 cut(s)	475, 1042
BssMI	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	2 cut(s)	191, 399
BssT1I	CCWWGG	1 cut(s)	1042
Bst2BI	CACGAG	2 cut(s)	191, 399
Bst2UI	CCWGG	2 cut(s)	137, 1067
Bst4CI	ACNGT	4 cut(s)	476, 760, 902, 1386
Bst6I	CTCTTC	1 cut(s)	1107
BstACI	GRCGYC	1 cut(s)	39
BstBAI	YACGTR	2 cut(s)	535, 820
BstC8I	GCNNGC	2 cut(s)	785, 868
BstDEI	CTNAG	3 cut(s)	14, 186, 330
BstDSI	CCRYGG	2 cut(s)	475, 1042
BstF5I	GGATG	4 cut(s)	244, 929, 1075, 1170
BstKTI	GATC	6 cut(s)	337, 388, 413, 576, 598, 751
BstMAI	GTCTC	3 cut(s)	171, 333, 945
BstMBI	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
BstMWI	GCNNNNNNNGC	1 cut(s)	863
BstNI	CCWGG	2 cut(s)	137, 1067
BstNSI	RCATGY	3 cut(s)	547, 741, 1065
BstSCI	CCNGG	2 cut(s)	135, 1065
BstSLI	GKGCMC	1 cut(s)	1353
BstSNI	TACGTA	1 cut(s)	535
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	2 cut(s)	334, 410
BstYI	RGATCY	2 cut(s)	334, 410
BsuI	GTATCC	1 cut(s)	325
BsuRI	GGCC	3 cut(s)	5, 226, 269
BtgI	CCRYGG	2 cut(s)	475, 1042
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	4 cut(s)	244, 929, 1075, 1170
BtsIMutI	CAGTG	1 cut(s)	907
Cac8I	GCNNGC	2 cut(s)	785, 868
Cfr13I	GGNCC	1 cut(s)	224
CseI	GACGC	1 cut(s)	47
CsiI	ACCWGGT	1 cut(s)	135
Csp6I	GTAC	2 cut(s)	513, 1209
CspCI	CAANNNNNGTGG	2 cut(s)	959, 994
CviQI	GTAC	2 cut(s)	513, 1209
DdeI	CTNAG	3 cut(s)	14, 186, 330
DpnI	GATC	6 cut(s)	336, 387, 412, 575, 597, 750
DpnII	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
EaeI	YGGCCR	2 cut(s)	3, 267
Eam1104I	CTCTTC	1 cut(s)	1107
EarI	CTCTTC	1 cut(s)	1107
Ecl136II	GAGCTC	2 cut(s)	13, 190
Eco105I	TACGTA	1 cut(s)	535
Eco130I	CCWWGG	1 cut(s)	1042
Eco24I	GRGCYC	2 cut(s)	15, 192
Eco53kI	GAGCTC	2 cut(s)	13, 190
Eco72I	CACGTG	1 cut(s)	820
Eco88I	CYCGRG	1 cut(s)	1372
EcoICRI	GAGCTC	2 cut(s)	13, 190
EcoRI	GAATTC	1 cut(s)	584
EcoRII	CCWGG	2 cut(s)	135, 1065
EcoT14I	CCWWGG	1 cut(s)	1042
EcoT22I	ATGCAT	2 cut(s)	244, 739
EcoT38I	GRGCYC	2 cut(s)	15, 192
ErhI	CCWWGG	1 cut(s)	1042
Esp3I	CGTCTC	1 cut(s)	171
FaqI	GGGAC	1 cut(s)	1208
Fnu4HI	GCNGC	1 cut(s)	365
FokI	GGATG	4 cut(s)	251, 916, 1082, 1157
FriOI	GRGCYC	2 cut(s)	15, 192
Fsp4HI	GCNGC	1 cut(s)	365
FspBI	CTAG	6 cut(s)	62, 174, 450, 467, 510, 867
GluI	GCNGC	1 cut(s)	365
GsuI	CTGGAG	1 cut(s)	123
HaeIII	GGCC	3 cut(s)	5, 226, 269
HapII	CCGG	4 cut(s)	130, 227, 1174, 1397
HgaI	GACGC	1 cut(s)	47
Hin1I	GRCGYC	1 cut(s)	39
HinfI	GANTC	6 cut(s)	113, 1079, 1167, 1343, 1377, 1393
HpaII	CCGG	4 cut(s)	130, 227, 1174, 1397
HphI	GGTGA	4 cut(s)	244, 429, 775, 1265
Hpy166II	GTNNAC	5 cut(s)	46, 406, 472, 743, 1351
Hpy188III	TCNNGA	8 cut(s)	102, 193, 290, 332, 524, 1076, 1374, 1397
Hpy8I	GTNNAC	5 cut(s)	46, 406, 472, 743, 1351
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	3 cut(s)	352, 376, 1102
HpyCH4III	ACNGT	4 cut(s)	476, 760, 902, 1386
HpyCH4IV	ACGT	6 cut(s)	72, 81, 180, 534, 819, 1207
HpyCH4V	TGCA	7 cut(s)	70, 151, 242, 737, 787, 1306, 1351
HpyF10VI	GCNNNNNNNGC	1 cut(s)	863
HpyF3I	CTNAG	3 cut(s)	14, 186, 330
HpySE526I	ACGT	6 cut(s)	72, 81, 180, 534, 819, 1207
Hsp92I	GRCGYC	1 cut(s)	39
Kpn2I	TCCGGA	1 cut(s)	1396
Kzo9I	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
LguI	GCTCTTC	1 cut(s)	1107
LmnI	GCTCC	2 cut(s)	616, 1399
LweI	GCATC	3 cut(s)	229, 297, 1060
MabI	ACCWGGT	1 cut(s)	135
MaeI	CTAG	6 cut(s)	62, 174, 450, 467, 510, 867
MaeII	ACGT	6 cut(s)	72, 81, 180, 534, 819, 1207
MaeIII	GTNAC	4 cut(s)	435, 829, 988, 1160
MalI	GATC	6 cut(s)	336, 387, 412, 575, 597, 750
MboI	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
MflI	RGATCY	2 cut(s)	334, 410
MhlI	GDGCHC	3 cut(s)	15, 192, 1353
MlsI	TGGCCA	2 cut(s)	5, 269
MluNI	TGGCCA	2 cut(s)	5, 269
MlyI	GAGTC	1 cut(s)	1402
MmeI	TCCRAC	2 cut(s)	534, 544
Mox20I	TGGCCA	2 cut(s)	5, 269
Mph1103I	ATGCAT	2 cut(s)	244, 739
MroI	TCCGGA	1 cut(s)	1396
MroXI	GAANNNNTTC	1 cut(s)	1116
MscI	TGGCCA	2 cut(s)	5, 269
MseI	TTAA	5 cut(s)	201, 375, 395, 678, 1335
MslI	CAYNNNNRTG	2 cut(s)	1096, 1329
Msp20I	TGGCCA	2 cut(s)	5, 269
MspA1I	CMGCKG	1 cut(s)	1239
MspI	CCGG	4 cut(s)	130, 227, 1174, 1397
MspR9I	CCNGG	2 cut(s)	137, 1067
Mva1269I	GAATGC	2 cut(s)	698, 1371
MvaI	CCWGG	2 cut(s)	137, 1067
MwoI	GCNNNNNNNGC	1 cut(s)	863
NcoI	CCATGG	1 cut(s)	1042
NdeII	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
NheI	GCTAGC	1 cut(s)	866
NlaIV	GGNNCC	4 cut(s)	134, 336, 363, 1401
NmuCI	GTSAC	2 cut(s)	435, 1160
NsiI	ATGCAT	2 cut(s)	244, 739
NspI	RCATGY	3 cut(s)	547, 741, 1065
PaeR7I	CTCGAG	1 cut(s)	1372
PciSI	GCTCTTC	1 cut(s)	1107
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PctI	GAATGC	2 cut(s)	698, 1371
PdmI	GAANNNNTTC	1 cut(s)	1116
PfeI	GAWTC	5 cut(s)	113, 1079, 1167, 1343, 1377
PkrI	GCNGC	1 cut(s)	366
PleI	GAGTC	1 cut(s)	1401
PmaCI	CACGTG	1 cut(s)	820
PmlI	CACGTG	1 cut(s)	820
PpsI	GAGTC	1 cut(s)	1401
Ppu21I	YACGTR	2 cut(s)	535, 820
Psp124BI	GAGCTC	2 cut(s)	15, 192
Psp6I	CCWGG	2 cut(s)	135, 1065
PspCI	CACGTG	1 cut(s)	820
PspGI	CCWGG	2 cut(s)	135, 1065
PspN4I	GGNNCC	4 cut(s)	134, 336, 363, 1401
PspPI	GGNCC	1 cut(s)	224
PsuI	RGATCY	2 cut(s)	334, 410
PvuII	CAGCTG	1 cut(s)	1239
RsaI	GTAC	2 cut(s)	514, 1210
RsaNI	GTAC	2 cut(s)	513, 1209
RseI	CAYNNNNRTG	2 cut(s)	1096, 1329
SacI	GAGCTC	2 cut(s)	15, 192
SapI	GCTCTTC	1 cut(s)	1107
SaqAI	TTAA	5 cut(s)	201, 375, 395, 678, 1335
SatI	GCNGC	1 cut(s)	365
Sau3AI	GATC	6 cut(s)	334, 385, 410, 573, 595, 748
Sau96I	GGNCC	1 cut(s)	224
ScaI	AGTACT	1 cut(s)	514
SchI	GAGTC	1 cut(s)	1402
ScrFI	CCNGG	2 cut(s)	137, 1067
SduI	GDGCHC	3 cut(s)	15, 192, 1353
SexAI	ACCWGGT	1 cut(s)	135
SfaNI	GCATC	3 cut(s)	229, 297, 1060
Sfr274I	CTCGAG	1 cut(s)	1372
SlaI	CTCGAG	1 cut(s)	1372
SmiMI	CAYNNNNRTG	2 cut(s)	1096, 1329
SmlI	CTYRAG	3 cut(s)	524, 668, 1372
SmoI	CTYRAG	3 cut(s)	524, 668, 1372
SnaBI	TACGTA	1 cut(s)	535
SpeI	ACTAGT	2 cut(s)	466, 509
SsiI	CCGC	4 cut(s)	143, 365, 696, 966
SspI	AATATT	2 cut(s)	1050, 1088
SspMI	CTAG	6 cut(s)	62, 174, 450, 467, 510, 867
SstI	GAGCTC	2 cut(s)	15, 192
StyD4I	CCNGG	2 cut(s)	135, 1065
StyI	CCWWGG	1 cut(s)	1042
TaaI	ACNGT	4 cut(s)	476, 760, 902, 1386
TaiI	ACGT	6 cut(s)	75, 84, 183, 537, 822, 1210
TaqI	TCGA	3 cut(s)	747, 755, 1373
TatI	WGTACW	1 cut(s)	512
TauI	GCSGC	1 cut(s)	367
TfiI	GAWTC	5 cut(s)	113, 1079, 1167, 1343, 1377
Tru1I	TTAA	5 cut(s)	201, 375, 395, 678, 1335
Tru9I	TTAA	5 cut(s)	201, 375, 395, 678, 1335
TscAI	CASTG	1 cut(s)	907
TseFI	GTSAC	2 cut(s)	435, 1160
Tsp45I	GTSAC	2 cut(s)	435, 1160
TspDTI	ATGAA	7 cut(s)	47, 918, 1080, 1159, 1174, 1230, 1299
TspGWI	ACGGA	1 cut(s)	1336
TspRI	CASTG	1 cut(s)	907
VneI	GTGCAC	1 cut(s)	1349
XapI	RAATTY	8 cut(s)	454, 584, 710, 791, 955, 972, 1180, 1230
XceI	RCATGY	3 cut(s)	547, 741, 1065
XhoI	CTCGAG	1 cut(s)	1372
XmnI	GAANNNNTTC	1 cut(s)	1116
XspI	CTAG	6 cut(s)	62, 174, 450, 467, 510, 867
ZrmI	AGTACT	1 cut(s)	514
Zsp2I	ATGCAT	2 cut(s)	244, 739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.