RNA polymerase I-specific transcription initiation factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30590 AT1G30590 AT1G30590 AT2G34750 AT2G39240 AT2G39240 |
| fragaria_vesca | FvH4_1g10010 FvH4_1g10010 |
| malus_domestica | MD02G1108900.v1.1 |
| prunus_persica | Prupe.7G186400_v2.0.a1 Prupe.7G186400_v2.0.a1 |
| pyrus_communis | pycom02g08740 pycom15g20300 |
| rosa_chinensis | RchiOBHm_Chr2g0096801 RchiOBHm_Chr2g0096841 |
| rosa_laevigata | RLG00000016671 RLG00000016673 |
| rosa_multiflora | Rmu_co8477279.1_g000001 Rmu_ssc0000215.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00145270 Rroxscaffold_2G00145300 |
| rosa_rugosa | Rorug02G0061000 Rorug02G0061300 |
| rosa_samantha | Rh2AG108400 Rh2AG108800 Rh2BG110500 Rh2BG110800 Rh2CG112400 Rh2CG112900 Rh2DG111800 Rh2DG112100 |
| rosa_wichuraiana | Rw2G008380 Rw2G008420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 25 |
| AgsI | TTSAA | 2 cut(s) | 18, 179 |
| AoxI | GGCC | 1 cut(s) | 212 |
| ApeKI | GCWGC | 1 cut(s) | 65 |
| BbvI | GCAGC | 1 cut(s) | 77 |
| BccI | CCATC | 1 cut(s) | 153 |
| BisI | GCNGC | 1 cut(s) | 66 |
| BlpI | GCTNAGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 108 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 1 cut(s) | 50 |
| Bse3DI | GCAATG | 1 cut(s) | 26 |
| BseDI | CCNNGG | 1 cut(s) | 50 |
| BseMI | GCAATG | 1 cut(s) | 26 |
| BseXI | GCAGC | 1 cut(s) | 77 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BshFI | GGCC | 1 cut(s) | 214 |
| BsnI | GGCC | 1 cut(s) | 214 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 90 |
| BspANI | GGCC | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 26 |
| BssECI | CCNNGG | 1 cut(s) | 50 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssT1I | CCWWGG | 1 cut(s) | 50 |
| BstDEI | CTNAG | 1 cut(s) | 90 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstV1I | GCAGC | 1 cut(s) | 77 |
| BsuRI | GGCC | 1 cut(s) | 214 |
| Csp6I | GTAC | 1 cut(s) | 24 |
| CviAII | CATG | 3 cut(s) | 58, 107, 149 |
| CviJI | RGCY | 2 cut(s) | 135, 214 |
| CviKI_1 | RGCY | 2 cut(s) | 135, 214 |
| CviQI | GTAC | 1 cut(s) | 24 |
| DdeI | CTNAG | 1 cut(s) | 90 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| Eco130I | CCWWGG | 1 cut(s) | 50 |
| Eco147I | AGGCCT | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 1 cut(s) | 50 |
| ErhI | CCWWGG | 1 cut(s) | 50 |
| FaeI | CATG | 3 cut(s) | 61, 110, 152 |
| FaiI | YATR | 7 cut(s) | 37, 59, 108, 114, 150, 163, 224 |
| FatI | CATG | 3 cut(s) | 57, 106, 148 |
| Fnu4HI | GCNGC | 1 cut(s) | 66 |
| Fsp4HI | GCNGC | 1 cut(s) | 66 |
| GluI | GCNGC | 1 cut(s) | 66 |
| HaeIII | GGCC | 1 cut(s) | 214 |
| Hin1II | CATG | 3 cut(s) | 61, 110, 152 |
| HinfI | GANTC | 1 cut(s) | 201 |
| Hpy188III | TCNNGA | 2 cut(s) | 167, 176 |
| HpyAV | CCTTC | 1 cut(s) | 173 |
| HpyCH4V | TGCA | 3 cut(s) | 31, 65, 161 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 1 cut(s) | 90 |
| Hsp92II | CATG | 3 cut(s) | 61, 110, 152 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 3 cut(s) | 171, 219, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 77 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeIII | GTNAC | 1 cut(s) | 184 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MluCI | AATT | 1 cut(s) | 120 |
| MnlI | CCTC | 2 cut(s) | 147, 163 |
| MslI | CAYNNNNRTG | 2 cut(s) | 40, 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 3 cut(s) | 61, 110, 152 |
| NmeAIII | GCCGAG | 1 cut(s) | 169 |
| PceI | AGGCCT | 1 cut(s) | 214 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 196 |
| PfeI | GAWTC | 1 cut(s) | 201 |
| PkrI | GCNGC | 1 cut(s) | 67 |
| RsaI | GTAC | 1 cut(s) | 25 |
| RsaNI | GTAC | 1 cut(s) | 24 |
| RseI | CAYNNNNRTG | 2 cut(s) | 40, 111 |
| SatI | GCNGC | 1 cut(s) | 66 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 40, 111 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SseBI | AGGCCT | 1 cut(s) | 214 |
| SspI | AATATT | 1 cut(s) | 9 |
| StuI | AGGCCT | 1 cut(s) | 214 |
| StyI | CCWWGG | 1 cut(s) | 50 |
| TasI | AATT | 1 cut(s) | 120 |
| TfiI | GAWTC | 1 cut(s) | 201 |
| TseI | GCWGC | 1 cut(s) | 65 |