Rh2BG110500

RNA polymerase I-specific transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0004110
Physical Location & Seq
Reverse (-)
9344379 .. 9349873
5495 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG110500.1

Sequence Viewer

Length: 1791 bp
ATGGGCGTCGAGCTCCGGCAAGACCTTGATATGGATGACGGCGGCGTTTACTCCGACTACGACCTAGCTCTACACGTCAAGGATGTTCTCCTCTCAGTCTCCTCTGGCGATGTTGTGTCTGTTGAGAACTACAGAGAGCTCGTCGGGCGTCTGTACCCTAGAGAACGGCACTCTCCCGATGACGTCGCCAAGCTCGTGGCGAGCTTGAAGGGACTGTCCGGAGCAGCCTCTTATATTGACAGTGCTGTACATGTTGGCCTTCTCTCTCCGCTTTTCGCGATGAGCTTGTGGAACTATGGGCCTGATGTGATGGATGCATTGATTGAGTTGATTATTTCCTTGGCTGCTTCAAGTGGGAAGTATCTTGATCTATGCCTGGCTATGCTTACACGCCATTTCGAGACGCCTTCAAATTTCTTGGAGAAGTTGAAGTTGCCGTCTGGCCTTACAAAGAAGGACCAAGTTTTAACTCGTGTGCATTCAGCTCTGAAAGATATAGCTGATGTGGTTCCGCTTTCCCCTGCAAGAATAGTGACTATAGTTTCTGATCGTCTAGAGCTATATCGGCAAATGAGGGGAACTAGTACACATGGTCTTGTGATATTCGTAGAGAACATGTTAAAGTTGGAGGGCGGTGCACTTGGTGAAGTTGTTCGAGTTTCCATGCTTACGAAGGTGGTGGAATTGCTGCTACATTTGGATGTCGAAATGGGATCATGGGACAAAGTGTTACAAGATCATGGAATATTTCAGATGGAGCTAGAAGATGTGGACGACTTTACAGAAGATTTTCTGAATGATGGTACTGAGCATGCAAGAGAAGCAACTATAAACGACGTAACTTTGAAAAGTTTTGCTGAAAAGTTGGATACCTTGATGGTGTTAACTTTTGAGCACCTTGAATCCTGTGAAGCTGGTGGCCGGTTGAGTGAGGTCTTCAAAACTCTTCTCGAGACATTTAGGAACAAAGTTTTGACCACATGCAAGTCAAAATTTGTCCAGTTTGTGATGTTTTATGCCTGTGCTCTTGATCCTGTAAACTGTGGTGAGGAATTTGCCACAAACCTTGTCGAAATTTTTCTTTACGATGCCAACCTCACATGTCTCAGGATGAGAGCTGTTGCGTACCTTGCTAGCTACTTGTCTCGAGCGATGTTTATGTCAGCCTCCATAGTTGCTCAAACGCTCAAAAGGTTGGTGGGTTGGTGTTTTAACTATATCAAAACGAAGAAAGGTGGAGTAAACCCAGAAAAAGATAAATTATTTTATGCTGCGTGTCAGGCCATCATGTATTTGCTGTGCTTCCGAATGAGATCTTTGATGGATGATCCTCAATCAAAGTCGTTGCTTGCTGGTCTACCTTTAGAGTCGATTTTGAGCACTGAAATTAGCCCATTGAAGGCGTGTGCGCCTTCCATAGTGAAGGAGTTCCTATGGCAAGCGAATGCAGCTGGCTTAATCACGGCTGAGGAATTTGATTTTGATGATGGTCTGGAATCCGAATATTCATGGGTATGGGGTGGAAAGGAAGAGCTTCACAAGTTGTTCCCCTTTGACCCATGTTTGCTGAGAAATAGTGACAGGTTTGTCGTAGCTTTGAATTCATCTTTTCAGTGCTTTTTGATAAATAACACAGTGCCGGGAAATGCTGTTTTGAAAACCAAAGATTTGGGACTCCAAGCAGCCACGCCTTTTCACATTGACACTGCCTCTGGACAGTTGTGTGGAAAGCAAAATGAAAAATTAGCTGTAAGAATCAACATTTTAAAATTGTTTTGCATGCTTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRN3

Protein Analysis

596

Amino Acids

66.39

Weight (kDa)

5.14

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRN3 PF05327 22 - 531 1.2e-99 RNA polymerase I specific transcription initiation factor RRN3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1586
AatII GACGTC 1 cut(s) 186
AccI GTMKAC 1 cut(s) 1357
AccII CGCG 1 cut(s) 278
AccIII TCCGGA 1 cut(s) 218
AciI CCGC 4 cut(s) 42, 269, 512, 633
AclWI GGATC 3 cut(s) 721, 1025, 1322
AcoI YGGCCR 1 cut(s) 919
AcsI RAATTY 6 cut(s) 412, 992, 1052, 1074, 1472, 1600
AcyI GRCGYC 4 cut(s) 6, 148, 183, 404
AdeI CACNNNGTG 1 cut(s) 644
AfaI GTAC 5 cut(s) 155, 249, 586, 805, 1127
AfiI CCNNNNNNNGG 2 cut(s) 31, 1399
AflIII ACRYGT 4 cut(s) 73, 250, 615, 1100
AhlI ACTAGT 1 cut(s) 581
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 1 cut(s) 375
Alw21I GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
Alw26I GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
Alw44I GTGCAC 1 cut(s) 636
AlwI GGATC 3 cut(s) 721, 1025, 1322
Ama87I CYCGRG 2 cut(s) 950, 1146
Aor13HI TCCGGA 1 cut(s) 218
AoxI GGCC 5 cut(s) 256, 299, 442, 919, 1281
ApaLI GTGCAC 1 cut(s) 636
ApeKI GCWGC 6 cut(s) 224, 344, 688, 1271, 1448, 1682
ApoI RAATTY 6 cut(s) 412, 992, 1052, 1074, 1472, 1600
Asp700I GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
AspLEI GCGC 1 cut(s) 1411
AspS9I GGNCC 2 cut(s) 299, 457
AsuC2I CCSGG 1 cut(s) 1641
AsuHPI GGTGA 2 cut(s) 656, 1058
AsuNHI GCTAGC 1 cut(s) 1133
AvaI CYCGRG 2 cut(s) 950, 1146
AvaII GGWCC 1 cut(s) 457
BaeGI GKGCMC 1 cut(s) 640
BanII GRGCYC 2 cut(s) 15, 141
BauI CACGAG 2 cut(s) 194, 471
BbsI GAAGAC 1 cut(s) 928
Bbv12I GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
BbvCI CCTCAGC 1 cut(s) 1467
BbvI GCAGC 6 cut(s) 236, 331, 675, 1258, 1460, 1694
BccI CCATC 7 cut(s) 304, 748, 794, 871, 1292, 1315, 1481
BceAI ACGGC 4 cut(s) 55, 182, 421, 1479
BciT130I CCWGG 1 cut(s) 377
BciVI GTATCC 1 cut(s) 862
BcnI CCSGG 1 cut(s) 1641
BcoDI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
BfmI CTRYAG 2 cut(s) 130, 537
BfuI GTATCC 1 cut(s) 862
BglII AGATCT 1 cut(s) 1313
BisI GCNGC 7 cut(s) 43, 225, 345, 689, 1272, 1449, 1683
BlsI GCNGC 7 cut(s) 44, 226, 346, 690, 1273, 1450, 1684
Bme1390I CCNGG 2 cut(s) 377, 1641
Bme18I GGWCC 1 cut(s) 457
BmeT110I CYCGRG 2 cut(s) 950, 1146
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 2 cut(s) 299, 457
BmiI GGNNCC 1 cut(s) 510
BmrFI CCNGG 2 cut(s) 377, 1641
BmsI GCATC 2 cut(s) 304, 1078
BmtI GCTAGC 1 cut(s) 1137
BpiI GAAGAC 1 cut(s) 928
Bpu10I CCTNAGC 1 cut(s) 1467
BpuMI CCSGG 1 cut(s) 1641
BsaHI GRCGYC 4 cut(s) 6, 148, 183, 404
BsaJI CCNNGG 1 cut(s) 339
BsaWI WCCGGW 1 cut(s) 218
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 1399
Bse118I RCCGGY 1 cut(s) 921
Bse1I ACTGG 1 cut(s) 1000
BseAI TCCGGA 1 cut(s) 218
BseBI CCWGG 1 cut(s) 377
BseDI CCNNGG 1 cut(s) 339
BseGI GGATG 6 cut(s) 40, 88, 319, 706, 1116, 1330
BseLI CCNNNNNNNGG 2 cut(s) 31, 1399
BseMII CTCAG 5 cut(s) 108, 798, 1120, 1458, 1559
BseNI ACTGG 1 cut(s) 1000
BseRI GAGGAG 2 cut(s) 80, 91
BseSI GKGCMC 1 cut(s) 640
BseXI GCAGC 6 cut(s) 236, 331, 675, 1258, 1460, 1694
Bsh1236I CGCG 1 cut(s) 278
BshFI GGCC 5 cut(s) 258, 301, 444, 921, 1283
BsiHKAI GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
BsiHKCI CYCGRG 2 cut(s) 950, 1146
BsiSI CCGG 4 cut(s) 16, 219, 922, 1640
BslFI GGGAC 3 cut(s) 225, 734, 1686
BslI CCNNNNNNNGG 2 cut(s) 31, 1399
BsmAI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BsmBI CGTCTC 1 cut(s) 395
BsmFI GGGAC 3 cut(s) 225, 734, 1686
BsmI GAATGC 2 cut(s) 478, 1450
BsnI GGCC 5 cut(s) 258, 301, 444, 921, 1283
BsoBI CYCGRG 2 cut(s) 950, 1146
Bsp1286I GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
Bsp13I TCCGGA 1 cut(s) 218
Bsp1407I TGTACA 1 cut(s) 247
Bsp143I GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
Bsp68I TCGCGA 1 cut(s) 278
BspACI CCGC 4 cut(s) 42, 269, 512, 633
BspANI GGCC 5 cut(s) 258, 301, 444, 921, 1283
BspCNI CTCAG 5 cut(s) 107, 799, 1119, 1459, 1560
BspEI TCCGGA 1 cut(s) 218
BspFNI CGCG 1 cut(s) 278
BspLI GGNNCC 1 cut(s) 510
BspOI GCTAGC 1 cut(s) 1137
BspPI GGATC 3 cut(s) 721, 1025, 1322
BspQI GCTCTTC 1 cut(s) 1524
BsrFI RCCGGY 1 cut(s) 921
BsrGI TGTACA 1 cut(s) 247
BsrI ACTGG 1 cut(s) 1000
BssAI RCCGGY 1 cut(s) 921
BssECI CCNNGG 1 cut(s) 339
BssMI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
BssNI GRCGYC 4 cut(s) 6, 148, 183, 404
BssSI CACGAG 2 cut(s) 194, 471
BssT1I CCWWGG 1 cut(s) 339
Bst2BI CACGAG 2 cut(s) 194, 471
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 5 cut(s) 216, 242, 1043, 1636, 1719
Bst6I CTCTTC 2 cut(s) 951, 1524
BstACI GRCGYC 4 cut(s) 6, 148, 183, 404
BstAPI GCANNNNNTGC 1 cut(s) 1785
BstAUI TGTACA 1 cut(s) 247
BstC8I GCNNGC 7 cut(s) 202, 813, 1135, 1350, 1440, 1453, 1781
BstDEI CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
BstF5I GGATG 6 cut(s) 40, 88, 319, 706, 1116, 1330
BstFNI CGCG 1 cut(s) 278
BstHHI GCGC 1 cut(s) 1411
BstKTI GATC 7 cut(s) 370, 550, 716, 739, 1033, 1316, 1330
BstMAI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BstMBI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
BstMWI GCNNNNNNNGC 7 cut(s) 145, 565, 821, 1130, 1280, 1448, 1785
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 6 cut(s) 254, 619, 815, 984, 1104, 1783
BstSCI CCNGG 2 cut(s) 375, 1639
BstSFI CTRYAG 2 cut(s) 130, 537
BstSLI GKGCMC 1 cut(s) 640
BstUI CGCG 1 cut(s) 278
BstV1I GCAGC 6 cut(s) 236, 331, 675, 1258, 1460, 1694
BstV2I GAAGAC 1 cut(s) 928
BstX2I RGATCY 1 cut(s) 1313
BstXI CCANNNNNNTGG 2 cut(s) 196, 1669
BstYI RGATCY 1 cut(s) 1313
BsuI GTATCC 1 cut(s) 862
BsuRI GGCC 5 cut(s) 258, 301, 444, 921, 1283
BtgZI GCGATG 3 cut(s) 123, 293, 1166
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 6 cut(s) 40, 88, 319, 706, 1116, 1330
BtsI GCAGTG 1 cut(s) 1704
BtsIMutI CAGTG 5 cut(s) 247, 1380, 1619, 1641, 1704
BtuMI TCGCGA 1 cut(s) 278
Cac8I GCNNGC 7 cut(s) 202, 813, 1135, 1350, 1440, 1453, 1781
CfoI GCGC 1 cut(s) 1411
Cfr10I RCCGGY 1 cut(s) 921
Cfr13I GGNCC 2 cut(s) 299, 457
CseI GACGC 2 cut(s) 137, 412
Csp6I GTAC 5 cut(s) 154, 248, 585, 804, 1126
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviQI GTAC 5 cut(s) 154, 248, 585, 804, 1126
DdeI CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
DpnI GATC 7 cut(s) 369, 549, 715, 738, 1032, 1315, 1329
DpnII GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
DraI TTTAAA 1 cut(s) 1767
DraIII CACNNNGTG 1 cut(s) 644
DrdI GACNNNNNNGTC 1 cut(s) 1586
DseDI GACNNNNNNGTC 1 cut(s) 1586
EaeI YGGCCR 1 cut(s) 919
Eam1104I CTCTTC 2 cut(s) 951, 1524
EarI CTCTTC 2 cut(s) 951, 1524
Ecl136II GAGCTC 2 cut(s) 13, 139
Eco130I CCWWGG 1 cut(s) 339
Eco24I GRGCYC 2 cut(s) 15, 141
Eco47I GGWCC 1 cut(s) 457
Eco53kI GAGCTC 2 cut(s) 13, 139
Eco88I CYCGRG 2 cut(s) 950, 1146
EcoICRI GAGCTC 2 cut(s) 13, 139
EcoRI GAATTC 1 cut(s) 1600
EcoRII CCWGG 1 cut(s) 375
EcoT14I CCWWGG 1 cut(s) 339
EcoT22I ATGCAT 1 cut(s) 319
EcoT38I GRGCYC 2 cut(s) 15, 141
ErhI CCWWGG 1 cut(s) 339
Esp3I CGTCTC 1 cut(s) 395
FaqI GGGAC 3 cut(s) 225, 734, 1686
FblI GTMKAC 1 cut(s) 1357
Fnu4HI GCNGC 7 cut(s) 43, 225, 345, 689, 1272, 1449, 1683
FokI GGATG 6 cut(s) 47, 95, 326, 713, 1123, 1337
FriOI GRGCYC 2 cut(s) 15, 141
Fsp4HI GCNGC 7 cut(s) 43, 225, 345, 689, 1272, 1449, 1683
FspBI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
GlaI GCGC 1 cut(s) 1410
GluI GCNGC 7 cut(s) 43, 225, 345, 689, 1272, 1449, 1683
HaeIII GGCC 5 cut(s) 258, 301, 444, 921, 1283
HapII CCGG 4 cut(s) 16, 219, 922, 1640
HgaI GACGC 2 cut(s) 137, 412
HhaI GCGC 1 cut(s) 1411
Hin1I GRCGYC 4 cut(s) 6, 148, 183, 404
Hin6I GCGC 1 cut(s) 1409
HinP1I GCGC 1 cut(s) 1409
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HinfI GANTC 5 cut(s) 902, 1367, 1496, 1674, 1755
HpaI GTTAAC 1 cut(s) 885
HpaII CCGG 4 cut(s) 16, 219, 922, 1640
HphI GGTGA 2 cut(s) 656, 1058
Hpy166II GTNNAC 8 cut(s) 49, 587, 638, 772, 885, 1039, 1243, 1358
Hpy188I TCNGA 7 cut(s) 55, 489, 547, 753, 795, 1307, 1501
Hpy8I GTNNAC 8 cut(s) 49, 587, 638, 772, 885, 1039, 1243, 1358
Hpy99I CGWCG 4 cut(s) 11, 146, 188, 839
HpyAV CCTTC 8 cut(s) 202, 269, 417, 448, 667, 1393, 1417, 1422
HpyCH4III ACNGT 5 cut(s) 216, 242, 1043, 1636, 1719
HpyCH4IV ACGT 3 cut(s) 75, 183, 837
HpyCH4V TGCA 8 cut(s) 317, 478, 524, 638, 815, 984, 1448, 1779
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 565, 821, 1130, 1280, 1448, 1785
HpyF3I CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
HpySE526I ACGT 3 cut(s) 75, 183, 837
Hsp92I GRCGYC 4 cut(s) 6, 148, 183, 404
HspAI GCGC 1 cut(s) 1409
Kpn2I TCCGGA 1 cut(s) 218
KspAI GTTAAC 1 cut(s) 885
Kzo9I GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
LguI GCTCTTC 1 cut(s) 1524
LmnI GCTCC 3 cut(s) 18, 221, 757
Lsp1109I GCAGC 6 cut(s) 236, 331, 675, 1258, 1460, 1694
LweI GCATC 2 cut(s) 304, 1078
MaeI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
MaeII ACGT 3 cut(s) 75, 183, 837
MaeIII GTNAC 4 cut(s) 532, 729, 838, 1577
MalI GATC 7 cut(s) 369, 549, 715, 738, 1032, 1315, 1329
MboI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
MboII GAAGA 6 cut(s) 776, 797, 928, 938, 1240, 1541
MflI RGATCY 1 cut(s) 1313
MhlI GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
MlyI GAGTC 2 cut(s) 1376, 1668
MmeI TCCRAC 3 cut(s) 78, 606, 846
Mph1103I ATGCAT 1 cut(s) 319
MroI TCCGGA 1 cut(s) 218
MroXI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
MseI TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
MslI CAYNNNNRTG 2 cut(s) 699, 1513
MspA1I CMGCKG 1 cut(s) 1451
MspI CCGG 4 cut(s) 16, 219, 922, 1640
MspR9I CCNGG 2 cut(s) 377, 1641
Mva1269I GAATGC 2 cut(s) 478, 1450
MvaI CCWGG 1 cut(s) 377
MvnI CGCG 1 cut(s) 278
MwoI GCNNNNNNNGC 7 cut(s) 145, 565, 821, 1130, 1280, 1448, 1785
NciI CCSGG 1 cut(s) 1641
NdeII GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
NheI GCTAGC 1 cut(s) 1133
NlaIV GGNNCC 1 cut(s) 510
NmuCI GTSAC 2 cut(s) 532, 1577
NruI TCGCGA 1 cut(s) 278
NsiI ATGCAT 1 cut(s) 319
NspI RCATGY 6 cut(s) 254, 619, 815, 984, 1104, 1783
PaeI GCATGC 2 cut(s) 815, 1783
PaeR7I CTCGAG 2 cut(s) 950, 1146
PciI ACATGT 3 cut(s) 250, 615, 1100
PciSI GCTCTTC 1 cut(s) 1524
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PctI GAATGC 2 cut(s) 478, 1450
PdmI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
PfeI GAWTC 3 cut(s) 902, 1496, 1755
PkrI GCNGC 7 cut(s) 44, 226, 346, 690, 1273, 1450, 1684
PleI GAGTC 2 cut(s) 1375, 1668
PpsI GAGTC 2 cut(s) 1375, 1668
PscI ACATGT 3 cut(s) 250, 615, 1100
Psp124BI GAGCTC 2 cut(s) 15, 141
Psp6I CCWGG 1 cut(s) 375
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 1 cut(s) 510
PspPI GGNCC 2 cut(s) 299, 457
PsuI RGATCY 1 cut(s) 1313
PvuII CAGCTG 1 cut(s) 1451
RruI TCGCGA 1 cut(s) 278
RsaI GTAC 5 cut(s) 155, 249, 586, 805, 1127
RsaNI GTAC 5 cut(s) 154, 248, 585, 804, 1126
RseI CAYNNNNRTG 2 cut(s) 699, 1513
SacI GAGCTC 2 cut(s) 15, 141
SapI GCTCTTC 1 cut(s) 1524
SaqAI TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
SatI GCNGC 7 cut(s) 43, 225, 345, 689, 1272, 1449, 1683
Sau3AI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
Sau96I GGNCC 2 cut(s) 299, 457
SchI GAGTC 2 cut(s) 1376, 1668
ScrFI CCNGG 2 cut(s) 377, 1641
SduI GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
SfaNI GCATC 2 cut(s) 304, 1078
SfcI CTRYAG 2 cut(s) 130, 537
Sfr274I CTCGAG 2 cut(s) 950, 1146
SinI GGWCC 1 cut(s) 457
SlaI CTCGAG 2 cut(s) 950, 1146
SmiMI CAYNNNNRTG 2 cut(s) 699, 1513
SmlI CTYRAG 2 cut(s) 950, 1146
SmoI CTYRAG 2 cut(s) 950, 1146
SpeI ACTAGT 1 cut(s) 581
SphI GCATGC 2 cut(s) 815, 1783
SsiI CCGC 4 cut(s) 42, 269, 512, 633
SspI AATATT 2 cut(s) 747, 1505
SspMI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
SstI GAGCTC 2 cut(s) 15, 141
StyD4I CCNGG 2 cut(s) 375, 1639
StyI CCWWGG 1 cut(s) 339
TaaI ACNGT 5 cut(s) 216, 242, 1043, 1636, 1719
TaiI ACGT 3 cut(s) 78, 186, 840
TaqI TCGA 8 cut(s) 9, 399, 655, 705, 951, 1071, 1147, 1370
TatI WGTACW 2 cut(s) 247, 584
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 3 cut(s) 902, 1496, 1755
Tru1I TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
Tru9I TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
TscAI CASTG 5 cut(s) 247, 1387, 1619, 1641, 1711
TseFI GTSAC 2 cut(s) 532, 1577
TseI GCWGC 6 cut(s) 224, 344, 688, 1271, 1448, 1682
Tsp45I GTSAC 2 cut(s) 532, 1577
TspDTI ATGAA 3 cut(s) 1497, 1593, 1752
TspRI CASTG 5 cut(s) 247, 1387, 1619, 1641, 1711
VneI GTGCAC 1 cut(s) 636
VpaK11BI GGWCC 1 cut(s) 457
XapI RAATTY 6 cut(s) 412, 992, 1052, 1074, 1472, 1600
XbaI TCTAGA 1 cut(s) 553
XceI RCATGY 6 cut(s) 254, 619, 815, 984, 1104, 1783
XhoI CTCGAG 2 cut(s) 950, 1146
XmiI GTMKAC 1 cut(s) 1357
XmnI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
XspI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
ZraI GACGTC 1 cut(s) 184
Zsp2I ATGCAT 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.