Rh2AG108400

RNA polymerase I-specific transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0004110
Physical Location & Seq
Reverse (-)
9560539 .. 9567136
6598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG108400.1

Sequence Viewer

Length: 1884 bp
ATGGGCGTCGAGCTCCGGCAAGACCTTGATATGGATGACGGCGGCGTTTACTCCGACTACGACCTAGCTCTACACGTCAAGGATGTTCTCCTCTCAGTCTCCTCTGGCGATGTTGTGTCTGTTGAGAACTACAGAGAGCTCGTCGGGCGTCTGTACCCTAGAGAACGGCACTCTCCCGATGACGTCGCCAAGCTCGTGGCGAGCTTGAAGGGACTGTCCGGAGCAGCCTCTTATATTGACAGTGCTGTACATGTTGGCCTTCTCTCTCCGCTTTTCGCGATGAGCTTGTGGAACTATGGGCCTGATGTGATGGATGCATTGATTGAGTTGATTATTTCCTTGGCTGCTTCAAGTGGGAAGTATCTTGATCTATGCCTGGTTATGCTTACACGCCATTTCGAGACGCCTTCAAATTTCTTGGAGAAGTTGAAGTTGCCGTCTGGCCTTACAAAGAAGGACCAAGTTTTAACTCGTGTGCATTCAGCTCTGAAAGATATAGCTGATGTGGTTCCGCTTTCCCCTGCAAGAATAGTGACTATAGTTTCTGATCGTCTAGAGCTATATCGGCAAATGAGGGGAACTAGTACACATGGTCTTGTGATATTCATAGAGAACATGTTAAAGTTGGAGGGTGGTGCACTTGGTGAAGTTGTTCGAGTTTCCATGCTTACGAAGGTGGTGGAATTGCTGCTACATTTGGATGTTGAAATGGGATCATGGGACAAAGTGTTACAAGATCATGGAATATTTCAGATGGAGCTAGAAGATGTGGATGACTTTACAGAAGATTTTCTGAATGATGGTACTGAGCATGCAAGAGAAGCAACTATAAACGACGTAACTTTGAAAAGTTTTGCTGAAAAGTTGGATACCTTGATGGTGTTAACTTTTGAGCACCTTGAATCCTGTGAAGCTGGTGGCCGTTTGAGTGAGGTCTTCAAAACTCTTCTCGAGACATTTAGGAACAAAGTTTTGACCACATGCAAGTCAAAATTTGTCCAGTTTGTGATGTTTTATGCCTGTGCTCTTGATCCTGTAAACTGTGGTGAGGAATTTGCCACAAACCTTGTCGAAATTTTTCTTTACGATGTCAACCTCACATGTCTCAGGATGAGAGCTGTTGCGTACCTTGCTAGCTACTTGTCTCGAGCGATGTTTATTTCAGCCTCCATAGTTGCTCAAACGCTAAAAAGGTTGGTGGGTTGGTGTTTTAACTATATCAAAACGAAGAAAGGTGGAGTAAACCCAGAAAAAGATAAATTATTTTATGCTGCGTGTCAGGCCATCATGTATTTGCTGTGCTTCCGAATGAGATCTTTGATGGATGATCCTCAATCAAAGTCGTTGCTTGCTGGTCTACCTTTAGAGTCGATTTTGAGCACTGAAATTAGCCCATTGAAGGCGTGTGCGCCTTCCATAGTGAAGGAGTTCCTATGGCAAGCGAATGCAGCTGGCTTAATCACGGCTGAGGAATTTGATTTTGATGATGGTCTGGAATCCGAATATTCATGGGTATGGGGTGGAAAGGAAGAGCTTCACAAGTTGTTCCCTTTTGACCCATGTTTGCTGAGAAATAGTGACAGATTCATACGGCCCAATTTCATATACTGGTCAATGGTTCGACGAACCTACGAGGAGGAAAAAGAAGGGTCCAGCGATGAAGATGGTGATGAAGCTTTTGCGGTTGACAATGAGGAGAACGTCATGGATTATGAGATTTTGCAATGCTTGGAGGAACAACAATTCGATGAAGTTGACAATGCATTAAACAAAATGTCCATCACGCCAAAGGATTCCTTACACAATAGATTTGGTGGTGCAATAAATAAACCCATGCGAATGCCCTCACGAATTAGACCGTCCACAAGCCCAGAGTCTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRN3

Protein Analysis

627

Amino Acids

70.6

Weight (kDa)

4.82

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRN3 PF05327 22 - 541 2.8e-104 RNA polymerase I specific transcription initiation factor RRN3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccI GTMKAC 1 cut(s) 1357
AccII CGCG 1 cut(s) 278
AccIII TCCGGA 1 cut(s) 218
AciI CCGC 4 cut(s) 42, 269, 512, 1682
AclWI GGATC 3 cut(s) 721, 1025, 1322
AcoI YGGCCR 1 cut(s) 919
AcsI RAATTY 5 cut(s) 412, 992, 1052, 1074, 1472
AcyI GRCGYC 4 cut(s) 6, 148, 183, 404
AdeI CACNNNGTG 1 cut(s) 644
AfaI GTAC 5 cut(s) 155, 249, 586, 805, 1127
AfiI CCNNNNNNNGG 2 cut(s) 31, 1399
AflIII ACRYGT 4 cut(s) 73, 250, 615, 1100
AgsI TTSAA 9 cut(s) 208, 351, 411, 430, 707, 847, 902, 940, 1399
AhlI ACTAGT 1 cut(s) 581
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 1 cut(s) 375
Alw21I GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
Alw26I GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
Alw44I GTGCAC 1 cut(s) 636
AlwI GGATC 3 cut(s) 721, 1025, 1322
Ama87I CYCGRG 2 cut(s) 950, 1146
Aor13HI TCCGGA 1 cut(s) 218
AoxI GGCC 6 cut(s) 256, 299, 442, 919, 1281, 1592
ApaLI GTGCAC 1 cut(s) 636
ApeKI GCWGC 5 cut(s) 224, 344, 688, 1271, 1448
ApoI RAATTY 5 cut(s) 412, 992, 1052, 1074, 1472
Asp700I GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
AspLEI GCGC 1 cut(s) 1411
AspS9I GGNCC 4 cut(s) 299, 457, 1593, 1650
AsuHPI GGTGA 3 cut(s) 656, 1058, 1679
AsuNHI GCTAGC 1 cut(s) 1133
AvaI CYCGRG 2 cut(s) 950, 1146
AvaII GGWCC 2 cut(s) 457, 1650
BaeGI GKGCMC 1 cut(s) 640
BanII GRGCYC 2 cut(s) 15, 141
BauI CACGAG 2 cut(s) 194, 471
BbsI GAAGAC 1 cut(s) 928
Bbv12I GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
BbvCI CCTCAGC 1 cut(s) 1467
BbvI GCAGC 5 cut(s) 236, 331, 675, 1258, 1460
BccI CCATC 9 cut(s) 304, 748, 794, 871, 1292, 1315, 1481, 1658, 1787
BceAI ACGGC 6 cut(s) 55, 182, 421, 906, 1479, 1607
BciT130I CCWGG 1 cut(s) 377
BciVI GTATCC 1 cut(s) 862
BcoDI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
BfmI CTRYAG 2 cut(s) 130, 537
BfuI GTATCC 1 cut(s) 862
BglII AGATCT 1 cut(s) 1313
BisI GCNGC 6 cut(s) 43, 225, 345, 689, 1272, 1449
BlsI GCNGC 6 cut(s) 44, 226, 346, 690, 1273, 1450
Bme1390I CCNGG 1 cut(s) 377
Bme18I GGWCC 2 cut(s) 457, 1650
BmeT110I CYCGRG 2 cut(s) 950, 1146
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 4 cut(s) 299, 457, 1593, 1650
BmiI GGNNCC 2 cut(s) 510, 1651
BmrFI CCNGG 1 cut(s) 377
BmsI GCATC 1 cut(s) 304
BmtI GCTAGC 1 cut(s) 1137
BpiI GAAGAC 1 cut(s) 928
Bpu10I CCTNAGC 1 cut(s) 1467
BsaHI GRCGYC 4 cut(s) 6, 148, 183, 404
BsaJI CCNNGG 1 cut(s) 339
BsaWI WCCGGW 1 cut(s) 218
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 1399
Bse1I ACTGG 2 cut(s) 1000, 1613
Bse3DI GCAATG 1 cut(s) 1730
BseAI TCCGGA 1 cut(s) 218
BseBI CCWGG 1 cut(s) 377
BseDI CCNNGG 1 cut(s) 339
BseGI GGATG 7 cut(s) 40, 88, 319, 706, 778, 1116, 1330
BseLI CCNNNNNNNGG 2 cut(s) 31, 1399
BseMI GCAATG 1 cut(s) 1730
BseMII CTCAG 5 cut(s) 108, 798, 1120, 1458, 1559
BseNI ACTGG 2 cut(s) 1000, 1613
BseRI GAGGAG 4 cut(s) 80, 91, 1649, 1709
BseSI GKGCMC 1 cut(s) 640
BseXI GCAGC 5 cut(s) 236, 331, 675, 1258, 1460
Bsh1236I CGCG 1 cut(s) 278
BshFI GGCC 6 cut(s) 258, 301, 444, 921, 1283, 1594
BsiHKAI GWGCWC 6 cut(s) 15, 141, 640, 897, 1027, 1382
BsiHKCI CYCGRG 2 cut(s) 950, 1146
BsiSI CCGG 2 cut(s) 16, 219
BslFI GGGAC 2 cut(s) 225, 734
BslI CCNNNNNNNGG 2 cut(s) 31, 1399
BsmAI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BsmBI CGTCTC 1 cut(s) 395
BsmFI GGGAC 2 cut(s) 225, 734
BsmI GAATGC 3 cut(s) 478, 1450, 1845
BsnI GGCC 6 cut(s) 258, 301, 444, 921, 1283, 1594
BsoBI CYCGRG 2 cut(s) 950, 1146
Bsp1286I GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
Bsp13I TCCGGA 1 cut(s) 218
Bsp1407I TGTACA 1 cut(s) 247
Bsp143I GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
Bsp68I TCGCGA 1 cut(s) 278
BspACI CCGC 4 cut(s) 42, 269, 512, 1682
BspANI GGCC 6 cut(s) 258, 301, 444, 921, 1283, 1594
BspCNI CTCAG 5 cut(s) 107, 799, 1119, 1459, 1560
BspEI TCCGGA 1 cut(s) 218
BspFNI CGCG 1 cut(s) 278
BspLI GGNNCC 2 cut(s) 510, 1651
BspOI GCTAGC 1 cut(s) 1137
BspPI GGATC 3 cut(s) 721, 1025, 1322
BspQI GCTCTTC 1 cut(s) 1524
BsrDI GCAATG 1 cut(s) 1730
BsrGI TGTACA 1 cut(s) 247
BsrI ACTGG 2 cut(s) 1000, 1613
BssECI CCNNGG 1 cut(s) 339
BssMI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
BssNI GRCGYC 4 cut(s) 6, 148, 183, 404
BssSI CACGAG 2 cut(s) 194, 471
BssT1I CCWWGG 1 cut(s) 339
Bst2BI CACGAG 2 cut(s) 194, 471
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 4 cut(s) 216, 242, 1043, 1860
Bst6I CTCTTC 2 cut(s) 951, 1524
BstACI GRCGYC 4 cut(s) 6, 148, 183, 404
BstAUI TGTACA 1 cut(s) 247
BstC8I GCNNGC 6 cut(s) 202, 813, 1135, 1350, 1440, 1453
BstDEI CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
BstF5I GGATG 7 cut(s) 40, 88, 319, 706, 778, 1116, 1330
BstFNI CGCG 1 cut(s) 278
BstHHI GCGC 1 cut(s) 1411
BstKTI GATC 7 cut(s) 370, 550, 716, 739, 1033, 1316, 1330
BstMAI GTCTC 5 cut(s) 103, 395, 947, 1109, 1149
BstMBI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
BstMWI GCNNNNNNNGC 6 cut(s) 145, 565, 821, 1130, 1280, 1448
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 5 cut(s) 254, 619, 815, 984, 1104
BstSCI CCNGG 1 cut(s) 375
BstSFI CTRYAG 2 cut(s) 130, 537
BstSLI GKGCMC 1 cut(s) 640
BstUI CGCG 1 cut(s) 278
BstV1I GCAGC 5 cut(s) 236, 331, 675, 1258, 1460
BstV2I GAAGAC 1 cut(s) 928
BstX2I RGATCY 1 cut(s) 1313
BstXI CCANNNNNNTGG 1 cut(s) 196
BstYI RGATCY 1 cut(s) 1313
BsuI GTATCC 1 cut(s) 862
BsuRI GGCC 6 cut(s) 258, 301, 444, 921, 1283, 1594
BtgZI GCGATG 4 cut(s) 123, 293, 1166, 1671
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 7 cut(s) 40, 88, 319, 706, 778, 1116, 1330
BtsIMutI CAGTG 2 cut(s) 247, 1380
BtuMI TCGCGA 1 cut(s) 278
Cac8I GCNNGC 6 cut(s) 202, 813, 1135, 1350, 1440, 1453
CfoI GCGC 1 cut(s) 1411
Cfr13I GGNCC 4 cut(s) 299, 457, 1593, 1650
CseI GACGC 2 cut(s) 137, 412
Csp6I GTAC 5 cut(s) 154, 248, 585, 804, 1126
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviQI GTAC 5 cut(s) 154, 248, 585, 804, 1126
DdeI CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
DpnI GATC 7 cut(s) 369, 549, 715, 738, 1032, 1315, 1329
DpnII GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
DraIII CACNNNGTG 1 cut(s) 644
EaeI YGGCCR 1 cut(s) 919
Eam1104I CTCTTC 2 cut(s) 951, 1524
EarI CTCTTC 2 cut(s) 951, 1524
Ecl136II GAGCTC 2 cut(s) 13, 139
Eco130I CCWWGG 1 cut(s) 339
Eco24I GRGCYC 2 cut(s) 15, 141
Eco47I GGWCC 2 cut(s) 457, 1650
Eco53kI GAGCTC 2 cut(s) 13, 139
Eco88I CYCGRG 2 cut(s) 950, 1146
EcoICRI GAGCTC 2 cut(s) 13, 139
EcoRII CCWGG 1 cut(s) 375
EcoT14I CCWWGG 1 cut(s) 339
EcoT22I ATGCAT 2 cut(s) 319, 1765
EcoT38I GRGCYC 2 cut(s) 15, 141
ErhI CCWWGG 1 cut(s) 339
Esp3I CGTCTC 1 cut(s) 395
FalI AAGNNNNNCTT 2 cut(s) 1781, 1813
FaqI GGGAC 2 cut(s) 225, 734
FblI GTMKAC 1 cut(s) 1357
Fnu4HI GCNGC 6 cut(s) 43, 225, 345, 689, 1272, 1449
FokI GGATG 7 cut(s) 47, 95, 326, 713, 785, 1123, 1337
FriOI GRGCYC 2 cut(s) 15, 141
Fsp4HI GCNGC 6 cut(s) 43, 225, 345, 689, 1272, 1449
FspBI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
GlaI GCGC 1 cut(s) 1410
GluI GCNGC 6 cut(s) 43, 225, 345, 689, 1272, 1449
HaeIII GGCC 6 cut(s) 258, 301, 444, 921, 1283, 1594
HapII CCGG 2 cut(s) 16, 219
HgaI GACGC 2 cut(s) 137, 412
HhaI GCGC 1 cut(s) 1411
Hin1I GRCGYC 4 cut(s) 6, 148, 183, 404
Hin6I GCGC 1 cut(s) 1409
HinP1I GCGC 1 cut(s) 1409
HincII GTYRAC 4 cut(s) 885, 1093, 1687, 1756
HindII GTYRAC 4 cut(s) 885, 1093, 1687, 1756
HindIII AAGCTT 1 cut(s) 1674
HinfI GANTC 6 cut(s) 902, 1367, 1496, 1584, 1793, 1874
HpaI GTTAAC 1 cut(s) 885
HpaII CCGG 2 cut(s) 16, 219
HphI GGTGA 3 cut(s) 656, 1058, 1679
Hpy188I TCNGA 7 cut(s) 55, 489, 547, 753, 795, 1307, 1501
Hpy99I CGWCG 5 cut(s) 11, 146, 188, 839, 1626
HpyAV CCTTC 9 cut(s) 202, 269, 417, 448, 667, 1393, 1417, 1422, 1640
HpyCH4III ACNGT 4 cut(s) 216, 242, 1043, 1860
HpyCH4IV ACGT 4 cut(s) 75, 183, 837, 1701
HpyF10VI GCNNNNNNNGC 6 cut(s) 145, 565, 821, 1130, 1280, 1448
HpyF3I CTNAG 5 cut(s) 94, 807, 1106, 1467, 1568
HpySE526I ACGT 4 cut(s) 75, 183, 837, 1701
Hsp92I GRCGYC 4 cut(s) 6, 148, 183, 404
HspAI GCGC 1 cut(s) 1409
Kpn2I TCCGGA 1 cut(s) 218
KspAI GTTAAC 1 cut(s) 885
Kzo9I GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
LguI GCTCTTC 1 cut(s) 1524
LmnI GCTCC 3 cut(s) 18, 221, 757
Lsp1109I GCAGC 5 cut(s) 236, 331, 675, 1258, 1460
LweI GCATC 1 cut(s) 304
MaeI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
MaeII ACGT 4 cut(s) 75, 183, 837, 1701
MaeIII GTNAC 4 cut(s) 532, 729, 838, 1577
MalI GATC 7 cut(s) 369, 549, 715, 738, 1032, 1315, 1329
MboI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
MboII GAAGA 7 cut(s) 776, 797, 928, 938, 1240, 1541, 1673
MflI RGATCY 1 cut(s) 1313
MhlI GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
MlyI GAGTC 2 cut(s) 1376, 1883
MmeI TCCRAC 3 cut(s) 78, 606, 846
Mph1103I ATGCAT 2 cut(s) 319, 1765
MroI TCCGGA 1 cut(s) 218
MroXI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
MseI TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
MslI CAYNNNNRTG 3 cut(s) 699, 1513, 1838
MspA1I CMGCKG 1 cut(s) 1451
MspI CCGG 2 cut(s) 16, 219
MspR9I CCNGG 1 cut(s) 377
Mva1269I GAATGC 3 cut(s) 478, 1450, 1845
MvaI CCWGG 1 cut(s) 377
MvnI CGCG 1 cut(s) 278
MwoI GCNNNNNNNGC 6 cut(s) 145, 565, 821, 1130, 1280, 1448
NdeII GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
NheI GCTAGC 1 cut(s) 1133
NlaIV GGNNCC 2 cut(s) 510, 1651
NmuCI GTSAC 2 cut(s) 532, 1577
NruI TCGCGA 1 cut(s) 278
NsiI ATGCAT 2 cut(s) 319, 1765
NspI RCATGY 5 cut(s) 254, 619, 815, 984, 1104
PaeI GCATGC 1 cut(s) 815
PaeR7I CTCGAG 2 cut(s) 950, 1146
PciI ACATGT 3 cut(s) 250, 615, 1100
PciSI GCTCTTC 1 cut(s) 1524
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PctI GAATGC 3 cut(s) 478, 1450, 1845
PdmI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
PfeI GAWTC 4 cut(s) 902, 1496, 1584, 1793
PkrI GCNGC 6 cut(s) 44, 226, 346, 690, 1273, 1450
PleI GAGTC 2 cut(s) 1375, 1882
PpsI GAGTC 2 cut(s) 1375, 1882
PscI ACATGT 3 cut(s) 250, 615, 1100
Psp124BI GAGCTC 2 cut(s) 15, 141
Psp6I CCWGG 1 cut(s) 375
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 2 cut(s) 510, 1651
PspPI GGNCC 4 cut(s) 299, 457, 1593, 1650
PsuI RGATCY 1 cut(s) 1313
PvuII CAGCTG 1 cut(s) 1451
RruI TCGCGA 1 cut(s) 278
RsaI GTAC 5 cut(s) 155, 249, 586, 805, 1127
RsaNI GTAC 5 cut(s) 154, 248, 585, 804, 1126
RseI CAYNNNNRTG 3 cut(s) 699, 1513, 1838
SacI GAGCTC 2 cut(s) 15, 141
SapI GCTCTTC 1 cut(s) 1524
SaqAI TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
SatI GCNGC 6 cut(s) 43, 225, 345, 689, 1272, 1449
Sau3AI GATC 7 cut(s) 367, 547, 713, 736, 1030, 1313, 1327
Sau96I GGNCC 4 cut(s) 299, 457, 1593, 1650
SchI GAGTC 2 cut(s) 1376, 1883
ScrFI CCNGG 1 cut(s) 377
SduI GDGCHC 6 cut(s) 15, 141, 640, 897, 1027, 1382
SfaNI GCATC 1 cut(s) 304
SfcI CTRYAG 2 cut(s) 130, 537
Sfr274I CTCGAG 2 cut(s) 950, 1146
SinI GGWCC 2 cut(s) 457, 1650
SlaI CTCGAG 2 cut(s) 950, 1146
SmiMI CAYNNNNRTG 3 cut(s) 699, 1513, 1838
SmlI CTYRAG 2 cut(s) 950, 1146
SmoI CTYRAG 2 cut(s) 950, 1146
SpeI ACTAGT 1 cut(s) 581
SphI GCATGC 1 cut(s) 815
SsiI CCGC 4 cut(s) 42, 269, 512, 1682
SspI AATATT 2 cut(s) 747, 1505
SspMI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
SstI GAGCTC 2 cut(s) 15, 141
StyD4I CCNGG 1 cut(s) 375
StyI CCWWGG 1 cut(s) 339
TaaI ACNGT 4 cut(s) 216, 242, 1043, 1860
TaiI ACGT 4 cut(s) 78, 186, 840, 1704
TaqI TCGA 9 cut(s) 9, 399, 655, 951, 1071, 1147, 1370, 1621, 1746
TatI WGTACW 2 cut(s) 247, 584
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 4 cut(s) 902, 1496, 1584, 1793
Tru1I TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
Tru9I TTAA 6 cut(s) 467, 620, 884, 1212, 1457, 1766
TscAI CASTG 2 cut(s) 247, 1387
TseFI GTSAC 2 cut(s) 532, 1577
TseI GCWGC 5 cut(s) 224, 344, 688, 1271, 1448
Tsp45I GTSAC 2 cut(s) 532, 1577
TspDTI ATGAA 7 cut(s) 595, 1497, 1576, 1591, 1674, 1686, 1764
TspRI CASTG 2 cut(s) 247, 1387
VneI GTGCAC 1 cut(s) 636
VpaK11BI GGWCC 2 cut(s) 457, 1650
XapI RAATTY 5 cut(s) 412, 992, 1052, 1074, 1472
XbaI TCTAGA 1 cut(s) 553
XceI RCATGY 5 cut(s) 254, 619, 815, 984, 1104
XhoI CTCGAG 2 cut(s) 950, 1146
XmiI GTMKAC 1 cut(s) 1357
XmnI GAANNNNTTC 5 cut(s) 651, 789, 1077, 1427, 1533
XspI CTAG 6 cut(s) 65, 159, 554, 582, 761, 1134
ZraI GACGTC 1 cut(s) 184
Zsp2I ATGCAT 2 cut(s) 319, 1765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.