Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0003439

Physical Location & Seq

Genomic Coordinates Reverse (-)

34081821 .. 34085920

Gene Structure 4100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00355420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGCAACTGTGTGTTCTGTTGTGTAAGATTAGACCGAATAGTCTCTGCATTACCAGAACCCCAAGGGCACGGCATTTACTTGTTGCAACTCTCTCGCTCTCCTTTTCGTTTTTCCTGCATGACGTCAACTCAGATGGGCTCTCCCTACAGGCCTACCAACACAAGTGTCTAACTGAGGAAATGGAAATAAACTTGGGGGAACTGGCGCTTGACCTCGATTTTCATCCATCGCAGCAATTAGTGACTACAGGTCTCATCGATGGCCACCTTCACTTGGATCGATATTCATCTGGTGGGTGTTGGAAGTTCATGCACATAGCGAATCTTGCAGAGCTGCTCGGTTCGTCAACAGTGGCAGTGCTATTGATGGAGTATGTAGCCATTTTGACGGGGTCTCCAGACCACACAATTCTTGCAACAGATGTGGAAACTGGTTCTGCTATCGATTGCCTTGAAAATGCTCATGAGGATGCAATCAATGGACTTATAAACTTGACCGCATCTACCATTGCCTCTGGAGATGATGGAGGCTGTGTTAAGGTCTGGGATACCAGACAACGATCTTGCTGCAATTCCTTTAATGCTCATCAGGACTACATCTCTGATATGACTTTTTCAGCTGATTCCATGAAACTCCTGGGAACTAGTGTGGATGTAACTCTGTCTGTTTGCAATCTTCGAAGAAATAAGGTCCTAGATCAATCTGAGTTTTCAGAAGACAAGCTACTGTCTGTTGTTATCATGAAGAATGGTCAGAAAGTTATTTGCAGCTCACAAACTGGGAATATATTGTTGTATTCATGGGGTTGTTTCAAGGATTGCAGTGATCGTTTTATTGATCTCTCTCCAAATTATGTTGATGCTTTGTTGAAGCTTGATGAAGATAGACTTATTGCTGGATCTGAGACCGGACTTATCCGCCTAGTAGGCATATTACCAAACAGAGTCATCCAACCAATTGCGGAGCGCTCAGAATATCCGGTAAAGCATCTTGGACGTATCCAGCAGTTTTATACATTCTCTCCTGATTACTGTTTCTTGCAGCAGTGGGATATGGATGATATATTGCAAGGCTCTGGAAATACTTCAAGGACTCAAGCAACTGTGGGGGACAATGATAGTGATGAGATTGATACAGATATTAATACTCCAAAGTCTAGAAAAGGTTGCAGGGTTGAAAATGCTTGTGATCAACTCAAAAATGAGATTAAGTTGCGCATCACTGAAAATTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000741 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009553 GO:0009559 GO:0009561 GO:0009790 GO:0009791 GO:0009793 GO:0009799 GO:0009855 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010197 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0022414 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0040007 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048229 GO:0048284 GO:0048316 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0061458 GO:0071704 GO:0071840 GO:0080186 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

411

Amino Acids

45.6

Weight (kDa)

4.93

Isoelectric Point (pI)

37.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WDR55	PF24796	62 - 331	2.4e-66	WDR55
WD40_CDC20-Fz	PF24807	68 - 268	2.8e-11	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	72 - 254	2.1e-11	Prp19 WD40 domain
WD40_Gbeta	PF25391	123 - 246	8.1e-07	G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd	PF25047	126 - 227	4.3e-06	TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	127 - 269	2.5e-09	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR5	PF25175	128 - 268	6.4e-15	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	128 - 275	3.2e-13	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	136 - 307	3.2e-14	WDR3 first beta-propeller domain
EIF3I	PF24805	150 - 235	7e-06	EIF3I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34260 AT2G34260
fragaria_vesca	FvH4_6g22900 FvH4_6g22900 FvH4_6g22900 FvH4_6g22900 FvH4_6g22900
malus_domestica	MD12G1063000.v1.1 MD14G1063600.v1.1
prunus_persica	Prupe.7G070600_v2.0.a1
pyrus_communis	pycom12g05550 pycom14g05140
rosa_chinensis	RchiOBHm_Chr3g0480691 RchiOBHm_Chr4g0410631 RchiOBHm_Chr5g0032061
rosa_laevigata	RLG00000023461
rosa_multiflora	Rmu_sc0001135.1_g000010 Rmu_sc0006144.1_g000003 Rmu_sc0010172.1_g000004
rosa_roxburghii	Rroxscaffold_5G00355420 Rroxscaffold_6G00401160
rosa_rugosa	Rorug03G0184600 Rorug03G0184700.1
rosa_samantha	Rh3AG237000 Rh3BG270100 Rh3DG262400 Rh4AG161900 Rh4AG162000 Rh4BG160900 Rh4BG161000 Rh4CG174900 Rh4CG175000 Rh4DG157800 Rh7AG489700
rosa_wichuraiana	Rw3G021220 Rw4G013510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	488
AasI	GACNNNNNNGTC	1 cut(s)	39
AatII	GACGTC	1 cut(s)	126
Acc16I	TGCGCA	1 cut(s)	1217
AciI	CCGC	3 cut(s)	498, 919, 962
AclWI	GGATC	2 cut(s)	285, 907
AcoI	YGGCCR	1 cut(s)	262
AcsI	RAATTY	1 cut(s)	1228
AcyI	GRCGYC	1 cut(s)	123
AfeI	AGCGCT	1 cut(s)	968
AfiI	CCNNNNNNNGG	1 cut(s)	274
AgsI	TTSAA	5 cut(s)	455, 814, 871, 1089, 1178
AhdI	GACNNNNNGTC	1 cut(s)	249
AhlI	ACTAGT	1 cut(s)	644
AjnI	CCWGG	1 cut(s)	636
AluBI	AGCT	5 cut(s)	334, 620, 724, 771, 874
AluI	AGCT	5 cut(s)	334, 620, 724, 771, 874
Alw26I	GTCTC	4 cut(s)	47, 257, 399, 899
AlwI	GGATC	2 cut(s)	285, 907
Aor51HI	AGCGCT	1 cut(s)	968
AoxI	GGCC	2 cut(s)	150, 262
ApeKI	GCWGC	5 cut(s)	232, 334, 567, 768, 1042
ApoI	RAATTY	1 cut(s)	1228
AseI	ATTAAT	1 cut(s)	1143
Asp700I	GAANNNNTTC	1 cut(s)	1084
AspLEI	GCGC	3 cut(s)	208, 969, 1218
AspS9I	GGNCC	1 cut(s)	691
AsuII	TTCGAA	1 cut(s)	679
AvaII	GGWCC	1 cut(s)	691
BaeGI	GKGCMC	1 cut(s)	70
BalI	TGGCCA	1 cut(s)	264
BanII	GRGCYC	1 cut(s)	141
BarI	GAAGNNNNNNTAC	2 cut(s)	708, 740
BbsI	GAAGAC	1 cut(s)	723
BbvI	GCAGC	5 cut(s)	244, 321, 554, 780, 1054
BccI	CCATC	5 cut(s)	128, 235, 254, 361, 518
BceAI	ACGGC	1 cut(s)	86
BcgI	CGANNNNNNTGC	4 cut(s)	75, 109, 549, 583
BciT130I	CCWGG	1 cut(s)	638
BciVI	GTATCC	2 cut(s)	541, 1010
BclI	TGATCA	1 cut(s)	1189
BcoDI	GTCTC	4 cut(s)	47, 257, 399, 899
BcuI	ACTAGT	1 cut(s)	644
BfaI	CTAG	5 cut(s)	645, 695, 923, 1158, 1234
BfmI	CTRYAG	2 cut(s)	146, 246
BfoI	RGCGCY	2 cut(s)	209, 970
BfuI	GTATCC	2 cut(s)	541, 1010
BglI	GCCNNNNNGGC	1 cut(s)	927
BisI	GCNGC	5 cut(s)	233, 335, 568, 769, 1043
BlsI	GCNGC	5 cut(s)	234, 336, 569, 770, 1044
Bme1390I	CCNGG	1 cut(s)	638
Bme18I	GGWCC	1 cut(s)	691
BmeRI	GACNNNNNGTC	1 cut(s)	249
BmgT120I	GGNCC	1 cut(s)	691
BmrFI	CCNGG	1 cut(s)	638
BmrI	ACTGGG	1 cut(s)	789
BmsI	GCATC	5 cut(s)	460, 509, 850, 997, 1227
BmuI	ACTGGG	1 cut(s)	789
BpiI	GAAGAC	1 cut(s)	723
BpmI	CTGGAG	2 cut(s)	381, 537
Bpu14I	TTCGAA	1 cut(s)	679
BpuEI	CTTGAG	1 cut(s)	1080
Bsa29I	ATCGAT	3 cut(s)	258, 280, 444
BsaBI	GATNNNNATC	2 cut(s)	222, 286
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	3 cut(s)	257, 399, 899
BsaJI	CCNNGG	2 cut(s)	62, 637
BsaWI	WCCGGW	2 cut(s)	908, 979
BsaXI	ACNNNNNCTCC	6 cut(s)	379, 409, 519, 549, 1006, 1036
Bsc4I	CCNNNNNNNGG	1 cut(s)	274
Bse1I	ACTGG	3 cut(s)	207, 436, 784
Bse3DI	GCAATG	1 cut(s)	507
Bse8I	GATNNNNATC	2 cut(s)	222, 286
BseBI	CCWGG	1 cut(s)	638
BseCI	ATCGAT	3 cut(s)	258, 280, 444
BseDI	CCNNGG	2 cut(s)	62, 637
BseGI	GGATG	5 cut(s)	223, 475, 658, 948, 1063
BseJI	GATNNNNATC	2 cut(s)	222, 286
BseLI	CCNNNNNNNGG	1 cut(s)	274
BseMI	GCAATG	1 cut(s)	507
BseMII	CTCAG	5 cut(s)	144, 165, 696, 894, 984
BseNI	ACTGG	3 cut(s)	207, 436, 784
BseSI	GKGCMC	1 cut(s)	70
BseXI	GCAGC	5 cut(s)	244, 321, 554, 780, 1054
BshFI	GGCC	2 cut(s)	152, 264
BshVI	ATCGAT	3 cut(s)	258, 280, 444
BsiSI	CCGG	2 cut(s)	909, 980
BslFI	GGGAC	1 cut(s)	1124
BslI	CCNNNNNNNGG	1 cut(s)	274
BsmAI	GTCTC	4 cut(s)	47, 257, 399, 899
BsmFI	GGGAC	1 cut(s)	1124
BsnI	GGCC	2 cut(s)	152, 264
Bso31I	GGTCTC	3 cut(s)	257, 399, 899
Bsp119I	TTCGAA	1 cut(s)	679
Bsp1286I	GDGCHC	2 cut(s)	70, 141
Bsp143I	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
BspACI	CCGC	3 cut(s)	498, 919, 962
BspANI	GGCC	2 cut(s)	152, 264
BspCNI	CTCAG	5 cut(s)	143, 166, 697, 895, 983
BspDI	ATCGAT	3 cut(s)	258, 280, 444
BspHI	TCATGA	2 cut(s)	463, 741
BspPI	GGATC	2 cut(s)	285, 907
BspT104I	TTCGAA	1 cut(s)	679
BspTNI	GGTCTC	3 cut(s)	257, 399, 899
BsrDI	GCAATG	1 cut(s)	507
BsrI	ACTGG	3 cut(s)	207, 436, 784
BssECI	CCNNGG	2 cut(s)	62, 637
BssMI	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	1 cut(s)	62
Bst2UI	CCWGG	1 cut(s)	638
Bst4CI	ACNGT	5 cut(s)	9, 352, 729, 1034, 1105
BstACI	GRCGYC	1 cut(s)	123
BstBI	TTCGAA	1 cut(s)	679
BstDEI	CTNAG	5 cut(s)	130, 174, 705, 903, 970
BstF5I	GGATG	5 cut(s)	223, 475, 658, 948, 1063
BstH2I	RGCGCY	2 cut(s)	209, 970
BstHHI	GCGC	3 cut(s)	208, 969, 1218
BstKTI	GATC	7 cut(s)	280, 563, 700, 829, 841, 902, 1192
BstMAI	GTCTC	4 cut(s)	47, 257, 399, 899
BstMBI	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
BstMWI	GCNNNNNNNGC	2 cut(s)	326, 927
BstNI	CCWGG	1 cut(s)	638
BstSCI	CCNGG	1 cut(s)	636
BstSFI	CTRYAG	2 cut(s)	146, 246
BstSLI	GKGCMC	1 cut(s)	70
BstV1I	GCAGC	5 cut(s)	244, 321, 554, 780, 1054
BstV2I	GAAGAC	1 cut(s)	723
BstX2I	RGATCY	1 cut(s)	899
BstYI	RGATCY	1 cut(s)	899
Bsu15I	ATCGAT	3 cut(s)	258, 280, 444
BsuI	GTATCC	2 cut(s)	541, 1010
BsuRI	GGCC	2 cut(s)	152, 264
BsuTUI	ATCGAT	3 cut(s)	258, 280, 444
BtgZI	GCGATG	1 cut(s)	213
BtsCI	GGATG	5 cut(s)	223, 475, 658, 948, 1063
BtsI	GCAGTG	3 cut(s)	363, 829, 1052
BtsIMutI	CAGTG	5 cut(s)	357, 363, 829, 1052, 1221
CciI	TCATGA	2 cut(s)	463, 741
CfoI	GCGC	3 cut(s)	208, 969, 1218
Cfr13I	GGNCC	1 cut(s)	691
ClaI	ATCGAT	3 cut(s)	258, 280, 444
CspCI	CAANNNNNGTGG	2 cut(s)	405, 440
CviAII	CATG	6 cut(s)	119, 310, 464, 628, 742, 801
DdeI	CTNAG	5 cut(s)	130, 174, 705, 903, 970
DpnI	GATC	7 cut(s)	279, 562, 699, 828, 840, 901, 1191
DpnII	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
DrdI	GACNNNNNNGTC	1 cut(s)	39
DriI	GACNNNNNGTC	1 cut(s)	249
DseDI	GACNNNNNNGTC	1 cut(s)	39
EaeI	YGGCCR	1 cut(s)	262
Eam1105I	GACNNNNNGTC	1 cut(s)	249
EciI	GGCGGA	1 cut(s)	908
Eco130I	CCWWGG	1 cut(s)	62
Eco147I	AGGCCT	1 cut(s)	152
Eco24I	GRGCYC	1 cut(s)	141
Eco31I	GGTCTC	3 cut(s)	257, 399, 899
Eco47I	GGWCC	1 cut(s)	691
Eco47III	AGCGCT	1 cut(s)	968
EcoO109I	RGGNCCY	1 cut(s)	691
EcoRII	CCWGG	1 cut(s)	636
EcoT14I	CCWWGG	1 cut(s)	62
EcoT38I	GRGCYC	1 cut(s)	141
ErhI	CCWWGG	1 cut(s)	62
FaeI	CATG	6 cut(s)	122, 313, 467, 631, 745, 804
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	1 cut(s)	1124
FatI	CATG	6 cut(s)	118, 309, 463, 627, 741, 800
FbaI	TGATCA	1 cut(s)	1189
Fnu4HI	GCNGC	5 cut(s)	233, 335, 568, 769, 1043
FokI	GGATG	5 cut(s)	210, 482, 665, 935, 1070
FriOI	GRGCYC	1 cut(s)	141
Fsp4HI	GCNGC	5 cut(s)	233, 335, 568, 769, 1043
FspBI	CTAG	5 cut(s)	645, 695, 923, 1158, 1234
FspI	TGCGCA	1 cut(s)	1217
GlaI	GCGC	3 cut(s)	207, 968, 1217
GluI	GCNGC	5 cut(s)	233, 335, 568, 769, 1043
GsuI	CTGGAG	2 cut(s)	381, 537
HaeII	RGCGCY	2 cut(s)	209, 970
HaeIII	GGCC	2 cut(s)	152, 264
HapII	CCGG	2 cut(s)	909, 980
HhaI	GCGC	3 cut(s)	208, 969, 1218
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	6 cut(s)	122, 313, 467, 631, 745, 804
Hin6I	GCGC	3 cut(s)	206, 967, 1216
HinP1I	GCGC	3 cut(s)	206, 967, 1216
HincII	GTYRAC	2 cut(s)	127, 348
HindII	GTYRAC	2 cut(s)	127, 348
HindIII	AAGCTT	1 cut(s)	872
HinfI	GANTC	4 cut(s)	322, 623, 945, 1093
HpaII	CCGG	2 cut(s)	909, 980
Hpy166II	GTNNAC	2 cut(s)	127, 348
Hpy188I	TCNGA	7 cut(s)	133, 604, 706, 715, 756, 904, 973
Hpy188III	TCNNGA	8 cut(s)	398, 464, 516, 590, 742, 1025, 1077, 1158
Hpy8I	GTNNAC	2 cut(s)	127, 348
HpyAV	CCTTC	1 cut(s)	278
HpyCH4III	ACNGT	5 cut(s)	9, 352, 729, 1034, 1105
HpyCH4IV	ACGT	2 cut(s)	123, 997
HpyF10VI	GCNNNNNNNGC	2 cut(s)	326, 927
HpyF3I	CTNAG	5 cut(s)	130, 174, 705, 903, 970
HpySE526I	ACGT	2 cut(s)	123, 997
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	6 cut(s)	122, 313, 467, 631, 745, 804
HspAI	GCGC	3 cut(s)	206, 967, 1216
Ksp22I	TGATCA	1 cut(s)	1189
Kzo9I	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
LmnI	GCTCC	1 cut(s)	964
Lsp1109I	GCAGC	5 cut(s)	244, 321, 554, 780, 1054
LweI	GCATC	5 cut(s)	460, 509, 850, 997, 1227
MaeI	CTAG	5 cut(s)	645, 695, 923, 1158, 1234
MaeII	ACGT	2 cut(s)	123, 997
MaeIII	GTNAC	2 cut(s)	241, 655
MalI	GATC	7 cut(s)	279, 562, 699, 828, 840, 901, 1191
MboI	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
MboII	GAAGA	5 cut(s)	668, 693, 728, 757, 893
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	1 cut(s)	899
MhlI	GDGCHC	2 cut(s)	70, 141
MlsI	TGGCCA	1 cut(s)	264
MluCI	AATT	6 cut(s)	236, 408, 571, 850, 957, 1228
MluNI	TGGCCA	1 cut(s)	264
MlyI	GAGTC	2 cut(s)	954, 1087
MmeI	TCCRAC	2 cut(s)	281, 976
MnlI	CCTC	5 cut(s)	169, 224, 460, 521, 523
Mox20I	TGGCCA	1 cut(s)	264
MroXI	GAANNNNTTC	1 cut(s)	1084
MscI	TGGCCA	1 cut(s)	264
MseI	TTAA	4 cut(s)	537, 579, 1143, 1209
MslI	CAYNNNNRTG	1 cut(s)	468
Msp20I	TGGCCA	1 cut(s)	264
MspA1I	CMGCKG	1 cut(s)	620
MspI	CCGG	2 cut(s)	909, 980
MspR9I	CCNGG	1 cut(s)	638
MunI	CAATTG	1 cut(s)	957
MvaI	CCWGG	1 cut(s)	638
MwoI	GCNNNNNNNGC	2 cut(s)	326, 927
NdeII	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
NlaIII	CATG	6 cut(s)	122, 313, 467, 631, 745, 804
NmuCI	GTSAC	1 cut(s)	241
NsbI	TGCGCA	1 cut(s)	1217
NspV	TTCGAA	1 cut(s)	679
PagI	TCATGA	2 cut(s)	463, 741
PceI	AGGCCT	1 cut(s)	152
PdmI	GAANNNNTTC	1 cut(s)	1084
PfeI	GAWTC	2 cut(s)	322, 623
PflFI	GACNNNGTC	1 cut(s)	391
PkrI	GCNGC	5 cut(s)	234, 336, 569, 770, 1044
PleI	GAGTC	2 cut(s)	953, 1087
PpsI	GAGTC	2 cut(s)	953, 1087
PpuMI	RGGWCCY	1 cut(s)	691
PshBI	ATTAAT	1 cut(s)	1143
PsiI	TTATAA	1 cut(s)	488
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	1 cut(s)	636
PspGI	CCWGG	1 cut(s)	636
PspPI	GGNCC	1 cut(s)	691
PspPPI	RGGWCCY	1 cut(s)	691
PsuI	RGATCY	1 cut(s)	899
PsyI	GACNNNGTC	1 cut(s)	391
PvuII	CAGCTG	1 cut(s)	620
RseI	CAYNNNNRTG	1 cut(s)	468
SaqAI	TTAA	4 cut(s)	537, 579, 1143, 1209
SatI	GCNGC	5 cut(s)	233, 335, 568, 769, 1043
Sau3AI	GATC	7 cut(s)	277, 560, 697, 826, 838, 899, 1189
Sau96I	GGNCC	1 cut(s)	691
SchI	GAGTC	2 cut(s)	954, 1087
ScrFI	CCNGG	1 cut(s)	638
SduI	GDGCHC	2 cut(s)	70, 141
SfaNI	GCATC	5 cut(s)	460, 509, 850, 997, 1227
SfcI	CTRYAG	2 cut(s)	146, 246
SfuI	TTCGAA	1 cut(s)	679
SinI	GGWCC	1 cut(s)	691
SmiMI	CAYNNNNRTG	1 cut(s)	468
SmlI	CTYRAG	1 cut(s)	1095
SmoI	CTYRAG	1 cut(s)	1095
SpeI	ACTAGT	1 cut(s)	644
Sse9I	AATT	6 cut(s)	236, 408, 571, 850, 957, 1228
SseBI	AGGCCT	1 cut(s)	152
SsiI	CCGC	3 cut(s)	498, 919, 962
SspMI	CTAG	5 cut(s)	645, 695, 923, 1158, 1234
StuI	AGGCCT	1 cut(s)	152
StyD4I	CCNGG	1 cut(s)	636
StyI	CCWWGG	1 cut(s)	62
TaaI	ACNGT	5 cut(s)	9, 352, 729, 1034, 1105
TaiI	ACGT	2 cut(s)	126, 1000
TaqI	TCGA	5 cut(s)	216, 258, 280, 444, 679
TaqII	GACCGA	1 cut(s)	49
TasI	AATT	6 cut(s)	236, 408, 571, 850, 957, 1228
TfiI	GAWTC	2 cut(s)	322, 623
Tru1I	TTAA	4 cut(s)	537, 579, 1143, 1209
Tru9I	TTAA	4 cut(s)	537, 579, 1143, 1209
TscAI	CASTG	5 cut(s)	357, 363, 829, 1052, 1228
TseFI	GTSAC	1 cut(s)	241
TseI	GCWGC	5 cut(s)	232, 334, 567, 768, 1042
Tsp45I	GTSAC	1 cut(s)	241
TspDTI	ATGAA	7 cut(s)	212, 276, 298, 644, 758, 789, 894
TspRI	CASTG	5 cut(s)	357, 363, 829, 1052, 1228
Tth111I	GACNNNGTC	1 cut(s)	391
VpaK11BI	GGWCC	1 cut(s)	691
VspI	ATTAAT	1 cut(s)	1143
XapI	RAATTY	1 cut(s)	1228
XbaI	TCTAGA	1 cut(s)	1157
XcmI	CCANNNNNNNNNTGG	1 cut(s)	634
XmnI	GAANNNNTTC	1 cut(s)	1084
XspI	CTAG	5 cut(s)	645, 695, 923, 1158, 1234
ZraI	GACGTC	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.