Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002070

Physical Location & Seq

Genomic Coordinates Reverse (-)

39378241 .. 39379686

Gene Structure 1446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00417740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGGCGATTCCTACTTCTCTTAAACTTACTACTACTTCAGGCTTTCTTCAACTGAATACAAAGAAACCTCGATACCCAGTTCATCATCTTCCTTCTCCATCCCAAACAGCATTAACCTTTCCAATCAAGAAACTACTTGAGCTAAATCCAAGGGATACTCTCACCCTCCCTCGTGCCCCTACCGATAGCATCTCACAAACTTTCACAAAATTGAAATCACAAGGGAAAGTAGCATTCATCCCCTACATCACCGCCGGTGATCCAGATCTCTCAACAACCATTCAAGCGTTGAAGGTGCTCGATTCTTGTGGATCCGATGTAATCGAACTAGGCATACCCTACTCCGATCCCTTACTAGACGGTCCGGTCATACGCGCTTCAGCGTCACGGTCCTTGGCAGGAGGGACAAAGTTCAACAATATCATCTCCATGTTAGAAGATGTTGTTCCCCAACTGTCGTGCCCTATCACTCTATTCTCCTACTATAACCCTATTATCAAGCATGGCATCGAAAACTTCATGTCCACCATTAGCCAAGCCGGCGTCCGTGGGCTTGTGGTTCCGGATGTCCCTTTTGAAAACACACAACACTTGAGAAATGAAGCCGCGAAGAACAACGTTGAGTTGGTGCTGCTAACCACACCCACTACTACAACATGTCGAATGAAAGACATTGTCCGAGCCTCGGAGGGTTTCGTGTACCTGGTGAGTGCGGTGGGGGTCACCGGGGCTCGTCCACGTGTGAACGAACAAGTTCCGAGTCTCTTGAGGGAGATTAAGGAGGTGACGAACAAGGCAGTGGCTGTTGGGTTCGGATTGTCGAAGCCTGAGCATGTGAAGCAGGTGGCCGAGTGGGGGGCAGATGGTGCTATTGTTGGTAGTGCCATTGTGAAGGTATTGGGTGAAGCTAGATCTCCATTGCAAGGGTTGAGAGACCTTGAAACTTTCGCCAAATCTTTCAAGGCTGCTCTCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004834 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009606 GO:0009607 GO:0009617 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0016043 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019752 GO:0033036 GO:0033037 GO:0033554 GO:0034641 GO:0042221 GO:0042401 GO:0042430 GO:0042435 GO:0042545 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0046219 GO:0046394 GO:0046483 GO:0050896 GO:0051179 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0098542 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00400 ko00402 ko01100 ko01110 ko01130 ko01230 map00260 map00400 map00402 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Trp_syntA

Protein Analysis

325

Amino Acids

35.06

Weight (kDa)

9.15

Isoelectric Point (pI)

32.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trp_syntA	PF00290	68 - 323	1.3e-90	Tryptophan synthase alpha chain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02610
fragaria_vesca	FvH4_6g10820 FvH4_6g10830
malus_domestica	MD17G1246800.v1.1
prunus_persica	Prupe.3G144200_v2.0.a1 Prupe.3G144300_v2.0.a1 Prupe.3G144400_v2.0.a1 Prupe.3G144500_v2.0.a1
pyrus_communis	pycom17g24810
rosa_chinensis	RchiOBHm_Chr1g0317261 RchiOBHm_Chr1g0325481 RchiOBHm_Chr3g0462061 RchiOBHm_Chr3g0462091 RchiOBHm_Chr5g0067051
rosa_laevigata	RLG00000013482 RLG00000024883 RLG00000030122
rosa_multiflora	Rmu_sc0007627.1_g000011 Rmu_sc0009268.1_g000017
rosa_roxburghii	Rroxscaffold_1G00014060 Rroxscaffold_6G00417740 Rroxscaffold_6G00417750
rosa_rugosa	Rorug03G0054600
rosa_samantha	Rh1AG067300 Rh1BG055800 Rh1CG068700 Rh1DG073600 Rh3AG113000 Rh3AG113100 Rh3BG116000 Rh3CG118700 Rh3CG118800 Rh3DG117800 Rh3DG117900 Rh5AG440900 Rh5BG458200 Rh5CG480000 Rh5DG473200
rosa_wichuraiana	Rw0G007850 Rw0G020470 Rw3G009530 Rw3G009540 Rw4G030480 Rw5G041210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	832
AasI	GACNNNNNNGTC	1 cut(s)	365
Acc36I	ACCTGC	1 cut(s)	832
AccII	CGCG	2 cut(s)	375, 608
AccIII	TCCGGA	1 cut(s)	562
AciI	CCGC	3 cut(s)	252, 606, 713
AclI	AACGTT	1 cut(s)	618
AclWI	GGATC	4 cut(s)	254, 306, 319, 341
AcoI	YGGCCR	1 cut(s)	846
AcuI	CTGAAG	2 cut(s)	21, 363
AcvI	CACGTG	1 cut(s)	740
AcyI	GRCGYC	1 cut(s)	543
AfaI	GTAC	1 cut(s)	701
AfiI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
AflIII	ACRYGT	2 cut(s)	656, 739
AgsI	TTSAA	8 cut(s)	50, 214, 284, 292, 415, 578, 941, 961
AjnI	CCWGG	1 cut(s)	702
AluBI	AGCT	2 cut(s)	142, 908
AluI	AGCT	2 cut(s)	142, 908
Alw21I	GWGCWC	1 cut(s)	300
Alw26I	GTCTC	2 cut(s)	767, 927
AlwI	GGATC	4 cut(s)	254, 306, 319, 341
AlwNI	CAGNNNCTG	1 cut(s)	803
Aor13HI	TCCGGA	1 cut(s)	562
AoxI	GGCC	1 cut(s)	846
ApeKI	GCWGC	2 cut(s)	631, 965
Asp700I	GAANNNNTTC	1 cut(s)	753
AspLEI	GCGC	1 cut(s)	377
AspS9I	GGNCC	2 cut(s)	362, 390
AsuC2I	CCSGG	1 cut(s)	727
AsuHPI	GGTGA	7 cut(s)	154, 241, 269, 715, 718, 796, 914
AvaII	GGWCC	2 cut(s)	362, 390
BaeGI	GKGCMC	2 cut(s)	178, 464
BamHI	GGATCC	1 cut(s)	311
BanII	GRGCYC	1 cut(s)	733
BauI	CACGAG	1 cut(s)	171
BbrPI	CACGTG	1 cut(s)	740
Bbv12I	GWGCWC	1 cut(s)	300
BbvI	GCAGC	2 cut(s)	618, 952
BccI	CCATC	2 cut(s)	106, 857
BciT130I	CCWGG	1 cut(s)	704
BciVI	GTATCC	1 cut(s)	148
BcnI	CCSGG	1 cut(s)	727
BcoDI	GTCTC	2 cut(s)	767, 927
BfaI	CTAG	3 cut(s)	329, 356, 909
BfuAI	ACCTGC	1 cut(s)	832
BfuI	GTATCC	1 cut(s)	148
BglI	GCCNNNNNGGC	1 cut(s)	540
BglII	AGATCT	2 cut(s)	265, 911
BisI	GCNGC	3 cut(s)	606, 632, 966
BlsI	GCNGC	3 cut(s)	607, 633, 967
Bme1390I	CCNGG	2 cut(s)	704, 727
Bme18I	GGWCC	2 cut(s)	362, 390
BmgT120I	GGNCC	2 cut(s)	362, 390
BmiI	GGNNCC	2 cut(s)	313, 561
BmrFI	CCNGG	2 cut(s)	704, 727
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	2 cut(s)	198, 516
BmuI	ACTGGG	1 cut(s)	71
Bpu10I	CCTNAGC	1 cut(s)	828
BpuEI	CTTGAG	3 cut(s)	158, 613, 787
BpuMI	CCSGG	1 cut(s)	727
BsaAI	YACGTR	1 cut(s)	740
BsaBI	GATNNNNATC	1 cut(s)	264
BsaHI	GRCGYC	1 cut(s)	543
BsaI	GGTCTC	1 cut(s)	927
BsaJI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BsaWI	WCCGGW	2 cut(s)	364, 562
Bsc4I	CCNNNNNNNGG	3 cut(s)	685, 855, 923
Bse118I	RCCGGY	2 cut(s)	254, 539
Bse1I	ACTGG	1 cut(s)	77
Bse3DI	GCAATG	1 cut(s)	917
Bse8I	GATNNNNATC	1 cut(s)	264
BseAI	TCCGGA	1 cut(s)	562
BseBI	CCWGG	1 cut(s)	704
BseDI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BseGI	GGATG	3 cut(s)	98, 237, 571
BseJI	GATNNNNATC	1 cut(s)	264
BseLI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
BseMI	GCAATG	1 cut(s)	917
BseMII	CTCAG	1 cut(s)	819
BseNI	ACTGG	1 cut(s)	77
BseSI	GKGCMC	2 cut(s)	178, 464
BseXI	GCAGC	2 cut(s)	618, 952
Bsh1236I	CGCG	2 cut(s)	375, 608
BshFI	GGCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	300
BsiSI	CCGG	5 cut(s)	255, 365, 540, 563, 726
BslFI	GGGAC	2 cut(s)	418, 554
BslI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
BsmAI	GTCTC	2 cut(s)	767, 927
BsmFI	GGGAC	2 cut(s)	418, 554
BsmI	GAATGC	1 cut(s)	233
BsnI	GGCC	1 cut(s)	848
Bso31I	GGTCTC	1 cut(s)	927
Bsp1286I	GDGCHC	4 cut(s)	178, 300, 464, 733
Bsp13I	TCCGGA	1 cut(s)	562
Bsp143I	GATC	5 cut(s)	259, 265, 311, 346, 911
BspACI	CCGC	3 cut(s)	252, 606, 713
BspANI	GGCC	1 cut(s)	848
BspCNI	CTCAG	1 cut(s)	820
BspEI	TCCGGA	1 cut(s)	562
BspFNI	CGCG	2 cut(s)	375, 608
BspLI	GGNNCC	2 cut(s)	313, 561
BspMI	ACCTGC	1 cut(s)	832
BspPI	GGATC	4 cut(s)	254, 306, 319, 341
BspTNI	GGTCTC	1 cut(s)	927
BsrDI	GCAATG	1 cut(s)	917
BsrFI	RCCGGY	2 cut(s)	254, 539
BsrI	ACTGG	1 cut(s)	77
BssAI	RCCGGY	2 cut(s)	254, 539
BssECI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BssMI	GATC	5 cut(s)	259, 265, 311, 346, 911
BssNI	GRCGYC	1 cut(s)	543
BssSI	CACGAG	1 cut(s)	171
BssT1I	CCWWGG	2 cut(s)	149, 393
Bst2BI	CACGAG	1 cut(s)	171
Bst2UI	CCWGG	1 cut(s)	704
Bst4CI	ACNGT	3 cut(s)	362, 390, 456
BstACI	GRCGYC	1 cut(s)	543
BstAPI	GCANNNNNTGC	1 cut(s)	866
BstBAI	YACGTR	1 cut(s)	740
BstC8I	GCNNGC	1 cut(s)	541
BstDEI	CTNAG	1 cut(s)	828
BstDSI	CCRYGG	1 cut(s)	547
BstEII	GGTNACC	1 cut(s)	721
BstF5I	GGATG	3 cut(s)	98, 237, 571
BstFNI	CGCG	2 cut(s)	375, 608
BstHHI	GCGC	1 cut(s)	377
BstKTI	GATC	5 cut(s)	262, 268, 314, 349, 914
BstMAI	GTCTC	2 cut(s)	767, 927
BstMBI	GATC	5 cut(s)	259, 265, 311, 346, 911
BstMWI	GCNNNNNNNGC	3 cut(s)	540, 838, 866
BstNI	CCWGG	1 cut(s)	704
BstNSI	RCATGY	2 cut(s)	660, 836
BstPI	GGTNACC	1 cut(s)	721
BstSCI	CCNGG	2 cut(s)	702, 725
BstSLI	GKGCMC	2 cut(s)	178, 464
BstUI	CGCG	2 cut(s)	375, 608
BstV1I	GCAGC	2 cut(s)	618, 952
BstX2I	RGATCY	3 cut(s)	265, 311, 911
BstYI	RGATCY	3 cut(s)	265, 311, 911
BsuI	GTATCC	1 cut(s)	148
BsuRI	GGCC	1 cut(s)	848
BtgI	CCRYGG	1 cut(s)	547
BtsCI	GGATG	3 cut(s)	98, 237, 571
BtsI	GCAGTG	1 cut(s)	804
BtsIMutI	CAGTG	1 cut(s)	804
BveI	ACCTGC	1 cut(s)	832
Cac8I	GCNNGC	1 cut(s)	541
CaiI	CAGNNNCTG	1 cut(s)	803
CfoI	GCGC	1 cut(s)	377
Cfr10I	RCCGGY	2 cut(s)	254, 539
Cfr13I	GGNCC	2 cut(s)	362, 390
CpoI	CGGWCCG	1 cut(s)	362
CseI	GACGC	2 cut(s)	372, 532
CsiI	ACCWGGT	1 cut(s)	702
Csp6I	GTAC	1 cut(s)	700
CspI	CGGWCCG	1 cut(s)	362
CviAII	CATG	5 cut(s)	430, 503, 520, 657, 833
CviQI	GTAC	1 cut(s)	700
DdeI	CTNAG	1 cut(s)	828
DpnI	GATC	5 cut(s)	261, 267, 313, 348, 913
DpnII	GATC	5 cut(s)	259, 265, 311, 346, 911
DrdI	GACNNNNNNGTC	1 cut(s)	365
DseDI	GACNNNNNNGTC	1 cut(s)	365
EaeI	YGGCCR	1 cut(s)	846
Eco130I	CCWWGG	2 cut(s)	149, 393
Eco24I	GRGCYC	1 cut(s)	733
Eco31I	GGTCTC	1 cut(s)	927
Eco47I	GGWCC	2 cut(s)	362, 390
Eco57I	CTGAAG	2 cut(s)	21, 363
Eco72I	CACGTG	1 cut(s)	740
Eco91I	GGTNACC	1 cut(s)	721
EcoO65I	GGTNACC	1 cut(s)	721
EcoRII	CCWGG	1 cut(s)	702
EcoT14I	CCWWGG	2 cut(s)	149, 393
EcoT38I	GRGCYC	1 cut(s)	733
ErhI	CCWWGG	2 cut(s)	149, 393
FaeI	CATG	5 cut(s)	433, 506, 523, 660, 836
FaiI	YATR	8 cut(s)	335, 371, 431, 486, 504, 521, 658, 834
FaqI	GGGAC	2 cut(s)	418, 554
FatI	CATG	5 cut(s)	429, 502, 519, 656, 832
Fnu4HI	GCNGC	3 cut(s)	606, 632, 966
FokI	GGATG	3 cut(s)	85, 224, 578
FriOI	GRGCYC	1 cut(s)	733
Fsp4HI	GCNGC	3 cut(s)	606, 632, 966
FspBI	CTAG	3 cut(s)	329, 356, 909
GlaI	GCGC	1 cut(s)	376
GluI	GCNGC	3 cut(s)	606, 632, 966
HaeIII	GGCC	1 cut(s)	848
HapII	CCGG	5 cut(s)	255, 365, 540, 563, 726
HgaI	GACGC	2 cut(s)	372, 532
HhaI	GCGC	1 cut(s)	377
Hin1I	GRCGYC	1 cut(s)	543
Hin1II	CATG	5 cut(s)	433, 506, 523, 660, 836
Hin6I	GCGC	1 cut(s)	375
HinP1I	GCGC	1 cut(s)	375
HinfI	GANTC	3 cut(s)	7, 302, 760
HpaII	CCGG	5 cut(s)	255, 365, 540, 563, 726
HphI	GGTGA	7 cut(s)	154, 241, 269, 715, 718, 796, 914
Hpy166II	GTNNAC	4 cut(s)	525, 700, 737, 745
Hpy188I	TCNGA	6 cut(s)	316, 346, 680, 688, 759, 815
Hpy188III	TCNNGA	4 cut(s)	127, 263, 563, 766
Hpy8I	GTNNAC	4 cut(s)	525, 700, 737, 745
HpyAV	CCTTC	3 cut(s)	102, 286, 886
HpyCH4III	ACNGT	3 cut(s)	362, 390, 456
HpyCH4IV	ACGT	2 cut(s)	618, 739
HpyCH4V	TGCA	1 cut(s)	922
HpyF10VI	GCNNNNNNNGC	3 cut(s)	540, 838, 866
HpyF3I	CTNAG	1 cut(s)	828
HpySE526I	ACGT	2 cut(s)	618, 739
Hsp92I	GRCGYC	1 cut(s)	543
Hsp92II	CATG	5 cut(s)	433, 506, 523, 660, 836
HspAI	GCGC	1 cut(s)	375
Kpn2I	TCCGGA	1 cut(s)	562
KroI	GCCGGC	1 cut(s)	539
KroNI	GCCGGC	1 cut(s)	541
Kzo9I	GATC	5 cut(s)	259, 265, 311, 346, 911
Lsp1109I	GCAGC	2 cut(s)	618, 952
LweI	GCATC	2 cut(s)	198, 516
MabI	ACCWGGT	1 cut(s)	702
MaeI	CTAG	3 cut(s)	329, 356, 909
MaeII	ACGT	2 cut(s)	618, 739
MaeIII	GTNAC	3 cut(s)	384, 721, 784
MalI	GATC	5 cut(s)	261, 267, 313, 348, 913
MboI	GATC	5 cut(s)	259, 265, 311, 346, 911
MboII	GAAGA	4 cut(s)	38, 80, 449, 622
MflI	RGATCY	3 cut(s)	265, 311, 911
MhlI	GDGCHC	4 cut(s)	178, 300, 464, 733
MluCI	AATT	1 cut(s)	209
MlyI	GAGTC	1 cut(s)	769
MnlI	CCTC	8 cut(s)	78, 176, 180, 395, 682, 694, 762, 775
MroI	TCCGGA	1 cut(s)	562
MroNI	GCCGGC	1 cut(s)	539
MroXI	GAANNNNTTC	1 cut(s)	753
MseI	TTAA	3 cut(s)	21, 113, 777
MslI	CAYNNNNRTG	1 cut(s)	428
MspI	CCGG	5 cut(s)	255, 365, 540, 563, 726
MspR9I	CCNGG	2 cut(s)	704, 727
Mva1269I	GAATGC	1 cut(s)	233
MvaI	CCWGG	1 cut(s)	704
MvnI	CGCG	2 cut(s)	375, 608
MwoI	GCNNNNNNNGC	3 cut(s)	540, 838, 866
NaeI	GCCGGC	1 cut(s)	541
NciI	CCSGG	1 cut(s)	727
NdeII	GATC	5 cut(s)	259, 265, 311, 346, 911
NgoMIV	GCCGGC	1 cut(s)	539
NlaIII	CATG	5 cut(s)	433, 506, 523, 660, 836
NlaIV	GGNNCC	2 cut(s)	313, 561
NmeAIII	GCCGAG	1 cut(s)	874
NmuCI	GTSAC	3 cut(s)	384, 721, 784
NspI	RCATGY	2 cut(s)	660, 836
PaqCI	CACCTGC	1 cut(s)	832
PciI	ACATGT	1 cut(s)	656
PctI	GAATGC	1 cut(s)	233
PdiI	GCCGGC	1 cut(s)	541
PdmI	GAANNNNTTC	1 cut(s)	753
PfeI	GAWTC	2 cut(s)	7, 302
PflFI	GACNNNGTC	1 cut(s)	674
PkrI	GCNGC	3 cut(s)	607, 633, 967
PleI	GAGTC	1 cut(s)	768
PmaCI	CACGTG	1 cut(s)	740
PmlI	CACGTG	1 cut(s)	740
PpsI	GAGTC	1 cut(s)	768
Ppu21I	YACGTR	1 cut(s)	740
PscI	ACATGT	1 cut(s)	656
Psp1406I	AACGTT	1 cut(s)	618
Psp6I	CCWGG	1 cut(s)	702
PspCI	CACGTG	1 cut(s)	740
PspEI	GGTNACC	1 cut(s)	721
PspGI	CCWGG	1 cut(s)	702
PspN4I	GGNNCC	2 cut(s)	313, 561
PspPI	GGNCC	2 cut(s)	362, 390
PsrI	GAACNNNNNNTAC	2 cut(s)	318, 350
PstNI	CAGNNNCTG	1 cut(s)	803
PsuI	RGATCY	3 cut(s)	265, 311, 911
PsyI	GACNNNGTC	1 cut(s)	674
RsaI	GTAC	1 cut(s)	701
RsaNI	GTAC	1 cut(s)	700
RseI	CAYNNNNRTG	1 cut(s)	428
Rsr2I	CGGWCCG	1 cut(s)	362
RsrII	CGGWCCG	1 cut(s)	362
SaqAI	TTAA	3 cut(s)	21, 113, 777
SatI	GCNGC	3 cut(s)	606, 632, 966
Sau3AI	GATC	5 cut(s)	259, 265, 311, 346, 911
Sau96I	GGNCC	2 cut(s)	362, 390
SchI	GAGTC	1 cut(s)	769
ScrFI	CCNGG	2 cut(s)	704, 727
SduI	GDGCHC	4 cut(s)	178, 300, 464, 733
SexAI	ACCWGGT	1 cut(s)	702
SfaNI	GCATC	2 cut(s)	198, 516
SgrAI	CRCCGGYG	1 cut(s)	254
SinI	GGWCC	2 cut(s)	362, 390
SmiMI	CAYNNNNRTG	1 cut(s)	428
SmlI	CTYRAG	3 cut(s)	137, 592, 766
SmoI	CTYRAG	3 cut(s)	137, 592, 766
Sse9I	AATT	1 cut(s)	209
SsiI	CCGC	3 cut(s)	252, 606, 713
SspMI	CTAG	3 cut(s)	329, 356, 909
StyD4I	CCNGG	2 cut(s)	702, 725
StyI	CCWWGG	2 cut(s)	149, 393
TaaI	ACNGT	3 cut(s)	362, 390, 456
TaiI	ACGT	2 cut(s)	621, 742
TaqI	TCGA	6 cut(s)	70, 300, 324, 510, 661, 821
TasI	AATT	1 cut(s)	209
TauI	GCSGC	1 cut(s)	608
TfiI	GAWTC	2 cut(s)	7, 302
Tru1I	TTAA	3 cut(s)	21, 113, 777
Tru9I	TTAA	3 cut(s)	21, 113, 777
TscAI	CASTG	1 cut(s)	804
TseFI	GTSAC	3 cut(s)	384, 721, 784
TseI	GCWGC	2 cut(s)	631, 965
Tsp45I	GTSAC	3 cut(s)	384, 721, 784
TspDTI	ATGAA	5 cut(s)	71, 226, 508, 615, 680
TspGWI	ACGGA	1 cut(s)	536
TspRI	CASTG	1 cut(s)	804
Tth111I	GACNNNGTC	1 cut(s)	674
VpaK11BI	GGWCC	2 cut(s)	362, 390
XceI	RCATGY	2 cut(s)	660, 836
XmnI	GAANNNNTTC	1 cut(s)	753
XspI	CTAG	3 cut(s)	329, 356, 909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.