Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002070

Physical Location & Seq

Genomic Coordinates Forward (+)

4205946 .. 4210294

Gene Structure 4349 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0054600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGAGACTATAACATGGAGAGAACGAAGACTAAGAACTGGAACAAGAGGAAGATTCCTATTCAGCTATCTCTGTTTCTTCCTCACCGGCTCGGGGCCTCAACTTTCGAGTCACATGAAGAGAACCAATTTCGAGCAAAACTCTATCCACAATGAAGATGGATCAAGGTGGGTTGATCTTCTTAATCAGAGGGTATGGTCACACGAACTTGCTAGCACACCACCCAGAGGTTGGAACTCCTATAACGCAATCAGCTGGACTATTACAGAGGAAGAGTTCTTGCAAAATGCTGAAATCATCTCCAAGAAGTTACTTCCTCATGGATATGAGTATGTAGTTGTGGACCATCTGTGGTATAGGAGAAATGTGACTGGCGCTTGTGTAGACTCTCTTGGAGTTGATGTAATTGATGAATGGGGGAGACCGATGCCTGACCCAGATAGGTGGCCTAGCTCCAGAGGTGGGAAAGGGTTTACTGAAGTGGCAGACAGAGTACATAAAATGGGTTTGAAGTTTGGAATTAATGTTATGAGAGGAATAAACATGCAAGCTGTAAAAGACAATACCCATATCTTGGATCCTCTCTCGGGTAATGTTTATGATTATTTCAATGGAAAAATTTGGACTGCACAAGATATAGGGATCAAGGAGAGGACTTGTGCTCGGATGCAAAATGGTTTCATGAGTGTGAATACAACCTTGCAAGCTGGAAGGTTTTTCTTGGCAGACCTCTATCAACTGTTTGCCAATTGGGGTGTTGATTTTGTGAAACAGGACTGCGTGTTTGGTAATGACTTGGACATGAATGAAATATATCATGCATCATGGCTTTTGAGGATTCAAAGACCTATATTGTATTCTGTATCTCCTGGAATTGGAGCAACACCCATGATGGCCAAAAGTGTAAGTGGTGTAGTGAACATGTACAGTATAAACGGGGATAACTGGGATGACTGGGAAGATGTTGTTGCCCGTTTTGATGTTGCCAGGGATTTTGCTGCTGCTAATATGATTGGAGCAAACAGCTCGTGGCCTGACTTAGATATGCTTCCCCTGGGATGGCTTAGTGATGCAGGTTCAAATGAAGGTCCACACAGAACAACTAACCTCACATTACCGGAGCAAAGAACTATGATGACCTTGTGGTGCATGGCCAAGTCTCCTCTCATGTTTGGAGGAGATCTGAGAAAGCTTGATGATACAACTTACAGTATCCTAACAAATCCTACCTTGCTAGAGGTCAATTCTTTTAGCTCAAATAATAAGGAGTTTCCATACATAAAATCTGAAGGACTTCGCTCTTGGGTTGCAACTGGAAGACAACGAGAAATATATGTTGCTTTATTTAATCTGAACTCAAAGAAGACTACTATAACCGCACAAAAATCAGACTTGGCCAAGGCACTTCCTGGGACGACATTGACTACTAGAGCTTCCTGCAAAGGCAAAGAAGTATGGAGCCGACTAGACTTGGGGATTATAGACCACTCCATATCCATTGCTGTAGAAACCCATGGGACTGCACTAGTTGTCCTACATTGCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0002376 GO:0002474 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005775 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0008285 GO:0009987 GO:0010033 GO:0015036 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0019221 GO:0019882 GO:0019884 GO:0019886 GO:0023052 GO:0030054 GO:0031647 GO:0031974 GO:0034097 GO:0034341 GO:0042127 GO:0042221 GO:0042590 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0047134 GO:0048002 GO:0048145 GO:0048147 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050821 GO:0050896 GO:0051716 GO:0055114 GO:0060333 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071346

KEGG Pathways

Metabolic & Signaling

ko04612 map04612

Pfam Domains

Protein Families

GILT SapA

Protein Analysis

515

Amino Acids

58.26

Weight (kDa)

6.47

Isoelectric Point (pI)

30.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Melibiase_2	PF16499	246 - 415	5.7e-10	Alpha galactosidase A
Melibiase_C	PF17801	431 - 511	1.6e-06	Alpha galactosidase C-terminal beta sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02610
fragaria_vesca	FvH4_6g10820 FvH4_6g10830
malus_domestica	MD17G1246800.v1.1
prunus_persica	Prupe.3G144200_v2.0.a1 Prupe.3G144300_v2.0.a1 Prupe.3G144400_v2.0.a1 Prupe.3G144500_v2.0.a1
pyrus_communis	pycom17g24810
rosa_chinensis	RchiOBHm_Chr1g0317261 RchiOBHm_Chr1g0325481 RchiOBHm_Chr3g0462061 RchiOBHm_Chr3g0462091 RchiOBHm_Chr5g0067051
rosa_laevigata	RLG00000013482 RLG00000024883 RLG00000030122
rosa_multiflora	Rmu_sc0007627.1_g000011 Rmu_sc0009268.1_g000017
rosa_roxburghii	Rroxscaffold_1G00014060 Rroxscaffold_6G00417740 Rroxscaffold_6G00417750
rosa_rugosa	Rorug03G0054600
rosa_samantha	Rh1AG067300 Rh1BG055800 Rh1CG068700 Rh1DG073600 Rh3AG113000 Rh3AG113100 Rh3BG116000 Rh3CG118700 Rh3CG118800 Rh3DG117800 Rh3DG117900 Rh5AG440900 Rh5BG458200 Rh5CG480000 Rh5DG473200
rosa_wichuraiana	Rw0G007850 Rw0G020470 Rw3G009530 Rw3G009540 Rw4G030480 Rw5G041210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1064
AccB7I	CCANNNNNTGG	2 cut(s)	231, 574
AccI	GTMKAC	1 cut(s)	384
AciI	CCGC	1 cut(s)	1377
AclWI	GGATC	4 cut(s)	169, 572, 585, 650
AcoI	YGGCCR	3 cut(s)	894, 1152, 1395
AcsI	RAATTY	1 cut(s)	618
AcuI	CTGAAG	2 cut(s)	498, 1308
AfaI	GTAC	2 cut(s)	495, 926
AfiI	CCNNNNNNNGG	8 cut(s)	93, 227, 231, 462, 574, 587, 875, 1059
AflIII	ACRYGT	1 cut(s)	921
AgsI	TTSAA	4 cut(s)	511, 610, 842, 1080
AhlI	ACTAGT	1 cut(s)	1525
AjnI	CCWGG	4 cut(s)	868, 986, 1053, 1408
AluBI	AGCT	9 cut(s)	66, 255, 453, 551, 707, 1026, 1192, 1254, 1433
AluI	AGCT	9 cut(s)	66, 255, 453, 551, 707, 1026, 1192, 1254, 1433
Alw21I	GWGCWC	1 cut(s)	664
Alw26I	GTCTC	2 cut(s)	415, 1164
AlwI	GGATC	4 cut(s)	169, 572, 585, 650
Ama87I	CYCGRG	2 cut(s)	91, 586
AoxI	GGCC	6 cut(s)	95, 446, 894, 1031, 1152, 1395
ApeKI	GCWGC	2 cut(s)	998, 1001
ApoI	RAATTY	1 cut(s)	618
ArsI	GACNNNNNNTTYG	2 cut(s)	767, 799
AseI	ATTAAT	1 cut(s)	522
Asp700I	GAANNNNTTC	1 cut(s)	1293
AspLEI	GCGC	1 cut(s)	377
AspS9I	GGNCC	3 cut(s)	95, 343, 1088
AsuHPI	GGTGA	1 cut(s)	76
AsuNHI	GCTAGC	1 cut(s)	212
AvaI	CYCGRG	2 cut(s)	91, 586
AvaII	GGWCC	2 cut(s)	343, 1088
BalI	TGGCCA	3 cut(s)	896, 1154, 1397
BamHI	GGATCC	1 cut(s)	577
BauI	CACGAG	1 cut(s)	1027
BbsI	GAAGAC	3 cut(s)	34, 1324, 1370
Bbv12I	GWGCWC	1 cut(s)	664
BbvI	GCAGC	2 cut(s)	985, 988
BccI	CCATC	4 cut(s)	152, 354, 886, 1053
BcgI	CGANNNNNNTGC	2 cut(s)	1008, 1042
BciT130I	CCWGG	4 cut(s)	870, 988, 1055, 1410
BciVI	GTATCC	1 cut(s)	1223
BcoDI	GTCTC	2 cut(s)	415, 1164
BcuI	ACTAGT	1 cut(s)	1525
BfaI	CTAG	6 cut(s)	213, 450, 1235, 1428, 1466, 1526
BfmI	CTRYAG	1 cut(s)	1503
BfoI	RGCGCY	1 cut(s)	378
BfuAI	ACCTGC	1 cut(s)	1064
BfuI	GTATCC	1 cut(s)	1223
BglII	AGATCT	1 cut(s)	1180
BisI	GCNGC	2 cut(s)	999, 1002
BlsI	GCNGC	2 cut(s)	1000, 1003
Bme1390I	CCNGG	4 cut(s)	870, 988, 1055, 1410
Bme18I	GGWCC	2 cut(s)	343, 1088
BmeT110I	CYCGRG	2 cut(s)	91, 586
BmgT120I	GGNCC	3 cut(s)	95, 343, 1088
BmiI	GGNNCC	3 cut(s)	96, 579, 1460
BmrFI	CCNGG	4 cut(s)	870, 988, 1055, 1410
BmrI	ACTGGG	2 cut(s)	955, 964
BmsI	GCATC	4 cut(s)	417, 657, 830, 1060
BmtI	GCTAGC	1 cut(s)	216
BmuI	ACTGGG	2 cut(s)	955, 964
BpiI	GAAGAC	3 cut(s)	34, 1324, 1370
BplI	GAGNNNNNCTC	2 cut(s)	125, 157
BpmI	CTGGAG	1 cut(s)	439
BsaI	GGTCTC	1 cut(s)	415
BsaJI	CCNNGG	6 cut(s)	987, 1053, 1054, 1398, 1409, 1513
BsaWI	WCCGGW	1 cut(s)	1117
BsaXI	ACNNNNNCTCC	2 cut(s)	387, 417
Bsc4I	CCNNNNNNNGG	8 cut(s)	93, 227, 231, 462, 574, 587, 875, 1059
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	5 cut(s)	43, 376, 950, 959, 1318
Bse3DI	GCAATG	2 cut(s)	1497, 1537
BseBI	CCWGG	4 cut(s)	870, 988, 1055, 1410
BseDI	CCNNGG	6 cut(s)	987, 1053, 1054, 1398, 1409, 1513
BseGI	GGATG	3 cut(s)	672, 955, 1064
BseLI	CCNNNNNNNGG	8 cut(s)	93, 227, 231, 462, 574, 587, 875, 1059
BseMI	GCAATG	2 cut(s)	1497, 1537
BseMII	CTCAG	1 cut(s)	1175
BseNI	ACTGG	5 cut(s)	43, 376, 950, 959, 1318
BseRI	GAGGAG	2 cut(s)	1152, 1191
BseXI	GCAGC	2 cut(s)	985, 988
BsgI	GTGCAG	2 cut(s)	612, 1506
BshFI	GGCC	6 cut(s)	97, 448, 896, 1033, 1154, 1397
BsiHKAI	GWGCWC	1 cut(s)	664
BsiHKCI	CYCGRG	2 cut(s)	91, 586
BsiSI	CCGG	2 cut(s)	87, 1118
BslFI	GGGAC	2 cut(s)	1426, 1531
BslI	CCNNNNNNNGG	8 cut(s)	93, 227, 231, 462, 574, 587, 875, 1059
BsmAI	GTCTC	2 cut(s)	415, 1164
BsmFI	GGGAC	2 cut(s)	1426, 1531
BsnI	GGCC	6 cut(s)	97, 448, 896, 1033, 1154, 1397
Bso31I	GGTCTC	1 cut(s)	415
BsoBI	CYCGRG	2 cut(s)	91, 586
Bsp1286I	GDGCHC	1 cut(s)	664
Bsp1407I	TGTACA	1 cut(s)	924
Bsp143I	GATC	5 cut(s)	161, 175, 577, 642, 1180
Bsp19I	CCATGG	1 cut(s)	1513
BspACI	CCGC	1 cut(s)	1377
BspANI	GGCC	6 cut(s)	97, 448, 896, 1033, 1154, 1397
BspCNI	CTCAG	1 cut(s)	1176
BspHI	TCATGA	1 cut(s)	681
BspLI	GGNNCC	3 cut(s)	96, 579, 1460
BspMI	ACCTGC	1 cut(s)	1064
BspOI	GCTAGC	1 cut(s)	216
BspPI	GGATC	4 cut(s)	169, 572, 585, 650
BspTNI	GGTCTC	1 cut(s)	415
BsrDI	GCAATG	2 cut(s)	1497, 1537
BsrFI	RCCGGY	1 cut(s)	86
BsrGI	TGTACA	1 cut(s)	924
BsrI	ACTGG	5 cut(s)	43, 376, 950, 959, 1318
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	6 cut(s)	987, 1053, 1054, 1398, 1409, 1513
BssMI	GATC	5 cut(s)	161, 175, 577, 642, 1180
BssSI	CACGAG	1 cut(s)	1027
BssT1I	CCWWGG	2 cut(s)	1398, 1513
Bst2BI	CACGAG	1 cut(s)	1027
Bst2UI	CCWGG	4 cut(s)	870, 988, 1055, 1410
Bst4CI	ACNGT	3 cut(s)	741, 929, 1211
Bst6I	CTCTTC	2 cut(s)	113, 267
BstAUI	TGTACA	1 cut(s)	924
BstC8I	GCNNGC	3 cut(s)	214, 549, 705
BstDEI	CTNAG	4 cut(s)	32, 1039, 1064, 1184
BstDSI	CCRYGG	1 cut(s)	1513
BstF5I	GGATG	3 cut(s)	672, 955, 1064
BstH2I	RGCGCY	1 cut(s)	378
BstHHI	GCGC	1 cut(s)	377
BstKTI	GATC	5 cut(s)	164, 178, 580, 645, 1183
BstMAI	GTCTC	2 cut(s)	415, 1164
BstMBI	GATC	5 cut(s)	161, 175, 577, 642, 1180
BstNI	CCWGG	4 cut(s)	870, 988, 1055, 1410
BstNSI	RCATGY	2 cut(s)	547, 925
BstSCI	CCNGG	4 cut(s)	868, 986, 1053, 1408
BstSFI	CTRYAG	1 cut(s)	1503
BstV1I	GCAGC	2 cut(s)	985, 988
BstV2I	GAAGAC	3 cut(s)	34, 1324, 1370
BstX2I	RGATCY	2 cut(s)	577, 1180
BstXI	CCANNNNNNTGG	1 cut(s)	444
BstYI	RGATCY	2 cut(s)	577, 1180
BsuI	GTATCC	1 cut(s)	1223
BsuRI	GGCC	6 cut(s)	97, 448, 896, 1033, 1154, 1397
BtgI	CCRYGG	1 cut(s)	1513
BtsCI	GGATG	3 cut(s)	672, 955, 1064
BveI	ACCTGC	1 cut(s)	1064
Cac8I	GCNNGC	3 cut(s)	214, 549, 705
CciI	TCATGA	1 cut(s)	681
CfoI	GCGC	1 cut(s)	377
Cfr10I	RCCGGY	1 cut(s)	86
Cfr13I	GGNCC	3 cut(s)	95, 343, 1088
Csp6I	GTAC	2 cut(s)	494, 925
CviQI	GTAC	2 cut(s)	494, 925
DdeI	CTNAG	4 cut(s)	32, 1039, 1064, 1184
DpnI	GATC	5 cut(s)	163, 177, 579, 644, 1182
DpnII	GATC	5 cut(s)	161, 175, 577, 642, 1180
EaeI	YGGCCR	3 cut(s)	894, 1152, 1395
Eam1104I	CTCTTC	2 cut(s)	113, 267
EarI	CTCTTC	2 cut(s)	113, 267
Eco130I	CCWWGG	2 cut(s)	1398, 1513
Eco31I	GGTCTC	1 cut(s)	415
Eco47I	GGWCC	2 cut(s)	343, 1088
Eco57I	CTGAAG	2 cut(s)	498, 1308
Eco88I	CYCGRG	2 cut(s)	91, 586
EcoO109I	RGGNCCY	1 cut(s)	95
EcoRII	CCWGG	4 cut(s)	868, 986, 1053, 1408
EcoT14I	CCWWGG	2 cut(s)	1398, 1513
EcoT22I	ATGCAT	1 cut(s)	823
ErhI	CCWWGG	2 cut(s)	1398, 1513
FaqI	GGGAC	2 cut(s)	1426, 1531
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	2 cut(s)	999, 1002
FokI	GGATG	3 cut(s)	679, 962, 1071
Fsp4HI	GCNGC	2 cut(s)	999, 1002
FspBI	CTAG	6 cut(s)	213, 450, 1235, 1428, 1466, 1526
GlaI	GCGC	1 cut(s)	376
GluI	GCNGC	2 cut(s)	999, 1002
GsuI	CTGGAG	1 cut(s)	439
HaeII	RGCGCY	1 cut(s)	378
HaeIII	GGCC	6 cut(s)	97, 448, 896, 1033, 1154, 1397
HapII	CCGG	2 cut(s)	87, 1118
HhaI	GCGC	1 cut(s)	377
Hin6I	GCGC	1 cut(s)	375
HinP1I	GCGC	1 cut(s)	375
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	4 cut(s)	54, 109, 386, 838
HpaII	CCGG	2 cut(s)	87, 1118
HphI	GGTGA	1 cut(s)	76
Hpy166II	GTNNAC	5 cut(s)	343, 385, 474, 919, 1091
Hpy188I	TCNGA	6 cut(s)	189, 666, 1185, 1288, 1353, 1390
Hpy188III	TCNNGA	2 cut(s)	456, 682
Hpy8I	GTNNAC	5 cut(s)	343, 385, 474, 919, 1091
HpyAV	CCTTC	3 cut(s)	705, 1079, 1283
HpyCH4III	ACNGT	3 cut(s)	741, 929, 1211
HpyF3I	CTNAG	4 cut(s)	32, 1039, 1064, 1184
HspAI	GCGC	1 cut(s)	375
Kzo9I	GATC	5 cut(s)	161, 175, 577, 642, 1180
LmnI	GCTCC	5 cut(s)	458, 878, 1016, 1120, 1458
Lsp1109I	GCAGC	2 cut(s)	985, 988
LweI	GCATC	4 cut(s)	417, 657, 830, 1060
MaeI	CTAG	6 cut(s)	213, 450, 1235, 1428, 1466, 1526
MaeIII	GTNAC	4 cut(s)	110, 198, 309, 367
MalI	GATC	5 cut(s)	163, 177, 579, 644, 1182
MboI	GATC	5 cut(s)	161, 175, 577, 642, 1180
MfeI	CAATTG	1 cut(s)	748
MflI	RGATCY	2 cut(s)	577, 1180
MhlI	GDGCHC	1 cut(s)	664
MlsI	TGGCCA	3 cut(s)	896, 1154, 1397
MluCI	AATT	8 cut(s)	127, 405, 519, 618, 748, 873, 1243, 1543
MluNI	TGGCCA	3 cut(s)	896, 1154, 1397
MlyI	GAGTC	2 cut(s)	118, 380
MmeI	TCCRAC	1 cut(s)	212
Mox20I	TGGCCA	3 cut(s)	896, 1154, 1397
Mph1103I	ATGCAT	1 cut(s)	823
MroXI	GAANNNNTTC	1 cut(s)	1293
MscI	TGGCCA	3 cut(s)	896, 1154, 1397
MseI	TTAA	3 cut(s)	183, 522, 1347
MslI	CAYNNNNRTG	2 cut(s)	324, 686
Msp20I	TGGCCA	3 cut(s)	896, 1154, 1397
MspA1I	CMGCKG	1 cut(s)	255
MspI	CCGG	2 cut(s)	87, 1118
MspR9I	CCNGG	4 cut(s)	870, 988, 1055, 1410
MunI	CAATTG	1 cut(s)	748
MvaI	CCWGG	4 cut(s)	870, 988, 1055, 1410
NcoI	CCATGG	1 cut(s)	1513
NdeII	GATC	5 cut(s)	161, 175, 577, 642, 1180
NheI	GCTAGC	1 cut(s)	212
NlaIV	GGNNCC	3 cut(s)	96, 579, 1460
NmuCI	GTSAC	3 cut(s)	110, 198, 367
NsiI	ATGCAT	1 cut(s)	823
NspI	RCATGY	2 cut(s)	547, 925
PagI	TCATGA	1 cut(s)	681
PasI	CCCWGGG	1 cut(s)	1054
PciI	ACATGT	1 cut(s)	921
PdmI	GAANNNNTTC	1 cut(s)	1293
PfeI	GAWTC	2 cut(s)	54, 838
PflMI	CCANNNNNTGG	2 cut(s)	231, 574
PfoI	TCCNGGA	1 cut(s)	868
PkrI	GCNGC	2 cut(s)	1000, 1003
PleI	GAGTC	2 cut(s)	117, 380
PpsI	GAGTC	2 cut(s)	117, 380
PscI	ACATGT	1 cut(s)	921
PshBI	ATTAAT	1 cut(s)	522
Psp6I	CCWGG	4 cut(s)	868, 986, 1053, 1408
PspGI	CCWGG	4 cut(s)	868, 986, 1053, 1408
PspN4I	GGNNCC	3 cut(s)	96, 579, 1460
PspPI	GGNCC	3 cut(s)	95, 343, 1088
PsuI	RGATCY	2 cut(s)	577, 1180
PvuII	CAGCTG	1 cut(s)	255
RsaI	GTAC	2 cut(s)	495, 926
RsaNI	GTAC	2 cut(s)	494, 925
RseI	CAYNNNNRTG	2 cut(s)	324, 686
SaqAI	TTAA	3 cut(s)	183, 522, 1347
SatI	GCNGC	2 cut(s)	999, 1002
Sau3AI	GATC	5 cut(s)	161, 175, 577, 642, 1180
Sau96I	GGNCC	3 cut(s)	95, 343, 1088
SchI	GAGTC	2 cut(s)	118, 380
ScrFI	CCNGG	4 cut(s)	870, 988, 1055, 1410
SduI	GDGCHC	1 cut(s)	664
SfaNI	GCATC	4 cut(s)	417, 657, 830, 1060
SfcI	CTRYAG	1 cut(s)	1503
SinI	GGWCC	2 cut(s)	343, 1088
SmiMI	CAYNNNNRTG	2 cut(s)	324, 686
SpeI	ACTAGT	1 cut(s)	1525
Sse9I	AATT	8 cut(s)	127, 405, 519, 618, 748, 873, 1243, 1543
SsiI	CCGC	1 cut(s)	1377
SspMI	CTAG	6 cut(s)	213, 450, 1235, 1428, 1466, 1526
StyD4I	CCNGG	4 cut(s)	868, 986, 1053, 1408
StyI	CCWWGG	2 cut(s)	1398, 1513
TaaI	ACNGT	3 cut(s)	741, 929, 1211
TaqI	TCGA	2 cut(s)	107, 132
TaqII	GACCGA	1 cut(s)	439
TasI	AATT	8 cut(s)	127, 405, 519, 618, 748, 873, 1243, 1543
TatI	WGTACW	2 cut(s)	493, 924
TfiI	GAWTC	2 cut(s)	54, 838
Tru1I	TTAA	3 cut(s)	183, 522, 1347
Tru9I	TTAA	3 cut(s)	183, 522, 1347
TseFI	GTSAC	3 cut(s)	110, 198, 367
TseI	GCWGC	2 cut(s)	998, 1001
Tsp45I	GTSAC	3 cut(s)	110, 198, 367
TspDTI	ATGAA	7 cut(s)	131, 168, 426, 670, 818, 822, 1098
Van91I	CCANNNNNTGG	2 cut(s)	231, 574
VpaK11BI	GGWCC	2 cut(s)	343, 1088
VspI	ATTAAT	1 cut(s)	522
XapI	RAATTY	1 cut(s)	618
XceI	RCATGY	2 cut(s)	547, 925
XcmI	CCANNNNNNNNNTGG	2 cut(s)	155, 228
XmiI	GTMKAC	1 cut(s)	384
XmnI	GAANNNNTTC	1 cut(s)	1293
XspI	CTAG	6 cut(s)	213, 450, 1235, 1428, 1466, 1526
Zsp2I	ATGCAT	1 cut(s)	823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.