Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005503

Physical Location & Seq

Genomic Coordinates Reverse (-)

39767663 .. 39769960

Gene Structure 2298 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0284100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGGGGGAGTTTTGGTTATGAAATTGGTTTTGATATACTCATTAGTTTTAAATTCCATGTCCATTTTCTGTTGTCGCTCCATGCAATTGAACCATCCGAGACTCGAAGGGAATGAGACGGATAGACTGGCATTGCTAGCAATCAAAGCTCAGATACAACATGATACGAATCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGACATCACCTGCAGTCGACGACATCGCCAAAGGGTGACAAAGCTGGAGCTGGGCTCTCTAGCGTTGGTTGGATCCATATCTCCACATATCGGAAATCTAAGCTTCTTAAGAGTGCTAATTCTCAAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGATTGCAGGTATTGCTTCTACTCAATAACTTATTTACTGGCACCATTCCTGCCAATATATCCAATTGCTTCAAACTCATCACTCTCCGTCTTGATGGAAACAATCTGGTGGGAAAAATTCCTCCCCCACTCAGTTCCTTGTCAAAGCTTCAGCTTTTTTCTTTGCAAAGCAACAATTTAACAGGAGAGATCCCTCCTTCATTGGGGAACCACTCGTCTCTCGAGGCATTTTCTGTAGCTGCTAATAACTTAGAAGGAAGCCTTCCTAGTTCTCTATGCCAGTTGAAAAGATTAACACGTATCTATTTAGGCTTAAATAGGTTATCTGGTATCATCCCTTCCTGCATTTTCAACCTCTCTAGTATAGTTCTTTTCGATGTAGCAATAAACCAAATTCAAGGAAGCCTTCCATCAAACTTGGGCAATGCTTTTCCCAACCTTCAAATCTTTTCCATTATGAATAATCAATTTACAGGGGCCATCCCTTGGTCACTATCCAATGCAACAAATCTTGTGTCGTTTCAGTGTAATTCAAACAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCATAACATTGTGAAGTTCAATGTCTGGCATAATAATCTTGGAAGCAGTAAAGATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAGCTAACTGAATTGGAGTTCCATGACAACAATTTTGGAGGCACGTTGCCCGCATCAATATCCAATCTCTCAATCAGTCTCGAAGATCTTTCGCTTTCAGAAAACCAACTACATGGAAGCATCCCAATTGGATTAGGGAATCTTGTCAACCTGCAATACCTCGTAATGGGAGGAAACTCCTTCACAGGTAGCATCCCCACAGACATTGGGCAGCTTTCAGGGCTTGGGTGGTTGTCTCTTAACAACAACCAATTATCGGGGAGCATTCCATCTTCTCTTGGAAATTTAACATCGTTAACAATTCTCCACTTGCAAGAAAATAATCTAGAGGGTAGCATCCCGTCCAGCCTAGGGAAATTCCACTGGTTAAACGAATTGCTTCTTTTTGGAAACAATCTGAATCACACGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAACAATTTTGGCATTGGATGGAAACCAATTTACTGGTTCCCTTCCCATGGAGATTGGAAATTTGAAGAATCTAGGTATACTGGACGTTTCTAACAACTTGTTATCAGGAAAACTTCCCAGTAGCCTCGGCAGTTGCGAGAGCTTAGAAGAACTATACTTGGAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGCTTTGGACCTTTCTCGCAACAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTGAACTTGGAGTACCTGAACCTCTCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTTTTTAAGAATGCAAGTGCGACTTCAGTTGCTGGAAATGCTGGACTCTGCGGAGGTATGGCTAGTCTTCGACTTCCGCTGTGCAAGCTTAATGACTCTAAAGGAGAAGGGCTGTCTCAGAGAATGAAACTAATGATCTCTTTAGTCTCCGGGTTCACTCTTTTGGGACTGGCTGTGGTGCTGTCTCTTTTTCTTCTTGGTAAGAAAAGGAAAGAAACTAATTTAAGCACTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCTACACTCCTCAGAGCTACCGATGGTTTTTCTTCAGCTAATTTGATAGGTGTGGGTGCTTTTGGATCTGTGTACAAAGGAATCCTTGTTGATGATAGAGTTGTTATTGCTGTGAAGGTGCTTAACATGTTACACTGGGGAGCAGCTAAGAGTTTCATGGCCGAATGTGAGGCATTGAGAAATATCAGACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009832 GO:0009834 GO:0009889 GO:0009891 GO:0009893 GO:0009900 GO:0009987 GO:0010047 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032504 GO:0042546 GO:0044085 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048609 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

765

Amino Acids

82.79

Weight (kDa)

8.53

Isoelectric Point (pI)

30.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	39 - 78	5.8e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	98 - 190	6.1e-08	Leucine-rich repeat region
LRR_14	PF23598	397 - 484	2.3e-09	Leucine-rich repeat region
LRR_14	PF23598	513 - 601	2.4e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46770
fragaria_vesca	FvH4_7g17540 FvH4_7g17550
malus_domestica	MD01G1088100.v1.1 MD01G1088300.v1.1 MD07G1158300.v1.1 MD08G1232800.v1.1
prunus_persica	Prupe.2G196600_v2.0.a1
pyrus_communis	pycom01g11190 pycom07g15480
rosa_chinensis	RchiOBHm_Chr1g0360971 RchiOBHm_Chr1g0361001
rosa_laevigata	RLG00000027761 RLG00000027763
rosa_multiflora	Rmu_co8429119.1_g000001 Rmu_sc0000677.1_g000011 Rmu_sc0000677.1_g000019
rosa_roxburghii	Rroxscaffold_4G00295590 Rroxscaffold_4G00295630
rosa_rugosa	Rorug01G0284100
rosa_samantha	Rh1AG295300 Rh1BG260200 Rh1BG260400 Rh1CG277500 Rh1CG277600 Rh1DG290200 Rh1DG290400
rosa_wichuraiana	Rw1G026130 Rw1G026140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	236
Acc36I	ACCTGC	3 cut(s)	236, 391, 1218
AccB1I	GGYRCC	2 cut(s)	434, 946
AccB7I	CCANNNNNTGG	1 cut(s)	879
AccI	GTMKAC	2 cut(s)	235, 1579
AciI	CCGC	5 cut(s)	1110, 1472, 1839, 1893, 1919
AclWI	GGATC	4 cut(s)	285, 298, 577, 2176
AcoI	YGGCCR	1 cut(s)	2262
AcsI	RAATTY	7 cut(s)	52, 510, 786, 952, 1342, 1415, 1561
AcuI	CTGAAG	3 cut(s)	527, 1851, 2121
AfaI	GTAC	3 cut(s)	1793, 1830, 2177
AflII	CTTAAG	1 cut(s)	325
AflIII	ACRYGT	2 cut(s)	689, 2229
AjuI	GAANNNNNNNTTGG	2 cut(s)	1769, 1801
Alw26I	GTCTC	9 cut(s)	94, 110, 615, 1042, 1142, 1299, 1962, 1993, 2031
AlwI	GGATC	4 cut(s)	285, 298, 577, 2176
AlwNI	CAGNNNCTG	1 cut(s)	1874
Ama87I	CYCGRG	1 cut(s)	614
AoxI	GGCC	3 cut(s)	870, 1486, 2262
ApeKI	GCWGC	3 cut(s)	632, 1270, 2246
ApoI	RAATTY	7 cut(s)	52, 510, 786, 952, 1342, 1415, 1561
ArsI	GACNNNNNNTTYG	6 cut(s)	893, 925, 1016, 1048, 1076, 1108
Asp700I	GAANNNNTTC	2 cut(s)	198, 1437
AspA2I	CCTAGG	1 cut(s)	1408
AspS9I	GGNCC	3 cut(s)	870, 1682, 1729
AsuC2I	CCSGG	1 cut(s)	1993
AsuHPI	GGTGA	3 cut(s)	217, 265, 1034
AsuNHI	GCTAGC	1 cut(s)	136
AvaI	CYCGRG	1 cut(s)	614
AvaII	GGWCC	2 cut(s)	1682, 1729
AvrII	CCTAGG	1 cut(s)	1408
BamHI	GGATCC	1 cut(s)	290
BanI	GGYRCC	2 cut(s)	434, 946
BanII	GRGCYC	1 cut(s)	275
BarI	GAAGNNNNNNTAC	2 cut(s)	715, 747
BbsI	GAAGAC	1 cut(s)	1901
BbvI	GCAGC	3 cut(s)	619, 1282, 2258
BccI	CCATC	8 cut(s)	102, 482, 811, 881, 1013, 1336, 1514, 2120
BclI	TGATCA	1 cut(s)	1047
BcnI	CCSGG	1 cut(s)	1993
BcoDI	GTCTC	9 cut(s)	94, 110, 615, 1042, 1142, 1299, 1962, 1993, 2031
BfaI	CTAG	8 cut(s)	137, 278, 660, 753, 1385, 1409, 1574, 1905
BfmI	CTRYAG	2 cut(s)	229, 627
BfrI	CTTAAG	1 cut(s)	325
BfuAI	ACCTGC	3 cut(s)	236, 391, 1218
BglII	AGATCT	1 cut(s)	1144
BisI	GCNGC	3 cut(s)	633, 1271, 2247
BlnI	CCTAGG	1 cut(s)	1408
BlsI	GCNGC	3 cut(s)	634, 1272, 2248
Bme1390I	CCNGG	1 cut(s)	1993
Bme18I	GGWCC	2 cut(s)	1682, 1729
BmeT110I	CYCGRG	1 cut(s)	614
BmgT120I	GGNCC	3 cut(s)	870, 1682, 1729
BmiI	GGNNCC	8 cut(s)	292, 436, 602, 871, 948, 1540, 1683, 1684
BmrFI	CCNGG	1 cut(s)	1993
BmrI	ACTGGG	2 cut(s)	1614, 2248
BmsI	GCATC	4 cut(s)	1121, 1188, 1260, 1404
BmtI	GCTAGC	1 cut(s)	140
BmuI	ACTGGG	2 cut(s)	1614, 2248
BpiI	GAAGAC	1 cut(s)	1901
BplI	GAGNNNNNCTC	2 cut(s)	257, 289
BpmI	CTGGAG	1 cut(s)	284
BpuEI	CTTGAG	3 cut(s)	326, 1048, 1793
BpuMI	CCSGG	1 cut(s)	1993
BsaAI	YACGTR	1 cut(s)	692
BsaBI	GATNNNNATC	2 cut(s)	168, 295
BsaJI	CCNNGG	4 cut(s)	878, 1408, 1548, 1627
BsaXI	ACNNNNNCTCC	1 cut(s)	30
Bse3DI	GCAATG	2 cut(s)	131, 823
Bse8I	GATNNNNATC	2 cut(s)	168, 295
BseDI	CCNNGG	4 cut(s)	878, 1408, 1548, 1627
BseGI	GGATG	7 cut(s)	94, 726, 873, 1179, 1251, 1395, 1525
BseJI	GATNNNNATC	2 cut(s)	168, 295
BseMI	GCAATG	2 cut(s)	131, 823
BseMII	CTCAG	5 cut(s)	164, 538, 1053, 1973, 2128
BseRI	GAGGAG	2 cut(s)	363, 2102
BseXI	GCAGC	3 cut(s)	619, 1282, 2258
BseYI	CCCAGC	1 cut(s)	268
BshFI	GGCC	3 cut(s)	872, 1488, 2264
BshNI	GGYRCC	2 cut(s)	434, 946
BsiHKCI	CYCGRG	1 cut(s)	614
BsiSI	CCGG	1 cut(s)	1992
BslFI	GGGAC	2 cut(s)	1695, 2022
BsmAI	GTCTC	9 cut(s)	94, 110, 615, 1042, 1142, 1299, 1962, 1993, 2031
BsmBI	CGTCTC	2 cut(s)	110, 615
BsmFI	GGGAC	2 cut(s)	1695, 2022
BsmI	GAATGC	2 cut(s)	1323, 1858
BsnI	GGCC	3 cut(s)	872, 1488, 2264
BsoBI	CYCGRG	1 cut(s)	614
Bsp1286I	GDGCHC	1 cut(s)	275
Bsp1407I	TGTACA	1 cut(s)	2175
Bsp143I	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
Bsp19I	CCATGG	1 cut(s)	1548
BspACI	CCGC	5 cut(s)	1110, 1472, 1839, 1893, 1919
BspANI	GGCC	3 cut(s)	872, 1488, 2264
BspCNI	CTCAG	5 cut(s)	163, 537, 1052, 1972, 2127
BspLI	GGNNCC	8 cut(s)	292, 436, 602, 871, 948, 1540, 1683, 1684
BspMAI	CTGCAG	1 cut(s)	233
BspMI	ACCTGC	3 cut(s)	236, 391, 1218
BspOI	GCTAGC	1 cut(s)	140
BspPI	GGATC	4 cut(s)	285, 298, 577, 2176
BspT107I	GGYRCC	2 cut(s)	434, 946
BspTI	CTTAAG	1 cut(s)	325
BsrDI	GCAATG	2 cut(s)	131, 823
BsrGI	TGTACA	1 cut(s)	2175
BssECI	CCNNGG	4 cut(s)	878, 1408, 1548, 1627
BssMI	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
BssNAI	GTATAC	1 cut(s)	1580
BssT1I	CCWWGG	3 cut(s)	878, 1408, 1548
Bst1107I	GTATAC	1 cut(s)	1580
BstAFI	CTTAAG	1 cut(s)	325
BstAPI	GCANNNNNTGC	2 cut(s)	397, 406
BstAUI	TGTACA	1 cut(s)	2175
BstBAI	YACGTR	1 cut(s)	692
BstC8I	GCNNGC	3 cut(s)	138, 1110, 1928
BstDEI	CTNAG	9 cut(s)	150, 317, 524, 643, 1039, 1645, 1959, 2114, 2250
BstDSI	CCRYGG	1 cut(s)	1548
BstF5I	GGATG	7 cut(s)	94, 726, 873, 1179, 1251, 1395, 1525
BstKTI	GATC	6 cut(s)	293, 585, 1050, 1147, 1980, 2171
BstMAI	GTCTC	9 cut(s)	94, 110, 615, 1042, 1142, 1299, 1962, 1993, 2031
BstMBI	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 146, 397, 406, 1279, 1880, 1927
BstNSI	RCATGY	1 cut(s)	2233
BstSCI	CCNGG	1 cut(s)	1991
BstSFI	CTRYAG	2 cut(s)	229, 627
BstV1I	GCAGC	3 cut(s)	619, 1282, 2258
BstV2I	GAAGAC	1 cut(s)	1901
BstX2I	RGATCY	4 cut(s)	290, 582, 1144, 2168
BstXI	CCANNNNNNTGG	3 cut(s)	1172, 1484, 1535
BstYI	RGATCY	4 cut(s)	290, 582, 1144, 2168
BstZ17I	GTATAC	1 cut(s)	1580
BsuRI	GGCC	3 cut(s)	872, 1488, 2264
BtgI	CCRYGG	1 cut(s)	1548
BtgZI	GCGATG	1 cut(s)	227
BtsCI	GGATG	7 cut(s)	94, 726, 873, 1179, 1251, 1395, 1525
BtsIMutI	CAGTG	3 cut(s)	923, 1420, 2236
BveI	ACCTGC	3 cut(s)	236, 391, 1218
Cac8I	GCNNGC	3 cut(s)	138, 1110, 1928
CaiI	CAGNNNCTG	1 cut(s)	1874
Cfr13I	GGNCC	3 cut(s)	870, 1682, 1729
Csp6I	GTAC	3 cut(s)	1792, 1829, 2176
CspCI	CAANNNNNGTGG	2 cut(s)	1246, 1281
CviAII	CATG	9 cut(s)	58, 82, 161, 186, 1082, 1172, 1549, 2230, 2260
CviQI	GTAC	3 cut(s)	1792, 1829, 2176
DdeI	CTNAG	9 cut(s)	150, 317, 524, 643, 1039, 1645, 1959, 2114, 2250
DpnI	GATC	6 cut(s)	292, 584, 1049, 1146, 1979, 2170
DpnII	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
DraI	TTTAAA	1 cut(s)	51
EaeI	YGGCCR	1 cut(s)	2262
Eco130I	CCWWGG	3 cut(s)	878, 1408, 1548
Eco24I	GRGCYC	1 cut(s)	275
Eco47I	GGWCC	2 cut(s)	1682, 1729
Eco57I	CTGAAG	3 cut(s)	527, 1851, 2121
Eco88I	CYCGRG	1 cut(s)	614
EcoO109I	RGGNCCY	1 cut(s)	1682
EcoT14I	CCWWGG	3 cut(s)	878, 1408, 1548
EcoT38I	GRGCYC	1 cut(s)	275
ErhI	CCWWGG	3 cut(s)	878, 1408, 1548
Esp3I	CGTCTC	2 cut(s)	110, 615
FaeI	CATG	9 cut(s)	61, 85, 164, 189, 1085, 1175, 1552, 2233, 2263
FalI	AAGNNNNNCTT	8 cut(s)	639, 671, 783, 815, 1849, 1881, 2172, 2204
FaqI	GGGAC	2 cut(s)	1695, 2022
FatI	CATG	9 cut(s)	57, 81, 160, 185, 1081, 1171, 1548, 2229, 2259
FauI	CCCGC	1 cut(s)	1117
FauNDI	CATATG	1 cut(s)	2101
FbaI	TGATCA	1 cut(s)	1047
FblI	GTMKAC	2 cut(s)	235, 1579
Fnu4HI	GCNGC	3 cut(s)	633, 1271, 2247
FokI	GGATG	7 cut(s)	81, 713, 860, 1166, 1238, 1382, 1532
FriOI	GRGCYC	1 cut(s)	275
Fsp4HI	GCNGC	3 cut(s)	633, 1271, 2247
FspBI	CTAG	8 cut(s)	137, 278, 660, 753, 1385, 1409, 1574, 1905
GluI	GCNGC	3 cut(s)	633, 1271, 2247
GsaI	CCCAGC	1 cut(s)	272
GsuI	CTGGAG	1 cut(s)	284
HaeIII	GGCC	3 cut(s)	872, 1488, 2264
HapII	CCGG	1 cut(s)	1992
Hin1II	CATG	9 cut(s)	61, 85, 164, 189, 1085, 1175, 1552, 2233, 2263
HincII	GTYRAC	3 cut(s)	236, 1207, 1356
HindII	GTYRAC	3 cut(s)	236, 1207, 1356
HindIII	AAGCTT	3 cut(s)	319, 539, 1928
HpaI	GTTAAC	1 cut(s)	1356
HpaII	CCGG	1 cut(s)	1992
HphI	GGTGA	3 cut(s)	217, 265, 1034
Hpy166II	GTNNAC	6 cut(s)	236, 1207, 1356, 1580, 1998, 2176
Hpy188III	TCNNGA	9 cut(s)	343, 485, 614, 939, 1139, 1385, 1608, 1752, 1772
Hpy8I	GTNNAC	6 cut(s)	236, 1207, 1356, 1580, 1998, 2176
Hpy99I	CGWCG	1 cut(s)	240
HpyCH4IV	ACGT	3 cut(s)	691, 1103, 1587
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 146, 397, 406, 1279, 1880, 1927
HpyF3I	CTNAG	9 cut(s)	150, 317, 524, 643, 1039, 1645, 1959, 2114, 2250
HpySE526I	ACGT	3 cut(s)	691, 1103, 1587
Hsp92II	CATG	9 cut(s)	61, 85, 164, 189, 1085, 1175, 1552, 2233, 2263
KflI	GGGWCCC	1 cut(s)	1682
Ksp22I	TGATCA	1 cut(s)	1047
KspAI	GTTAAC	1 cut(s)	1356
Kzo9I	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
LmnI	GCTCC	5 cut(s)	83, 265, 1320, 1823, 2243
Lsp1109I	GCAGC	3 cut(s)	619, 1282, 2258
LweI	GCATC	4 cut(s)	1121, 1188, 1260, 1404
MaeI	CTAG	8 cut(s)	137, 278, 660, 753, 1385, 1409, 1574, 1905
MaeII	ACGT	3 cut(s)	691, 1103, 1587
MaeIII	GTNAC	5 cut(s)	175, 253, 882, 1022, 2232
MalI	GATC	6 cut(s)	292, 584, 1049, 1146, 1979, 2170
MboI	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
MboII	GAAGA	9 cut(s)	956, 1154, 1323, 1579, 1661, 1666, 1901, 2027, 2127
MfeI	CAATTG	3 cut(s)	86, 457, 1185
MflI	RGATCY	4 cut(s)	290, 582, 1144, 2168
MhlI	GDGCHC	1 cut(s)	275
MlyI	GAGTC	3 cut(s)	96, 1881, 1931
MmeI	TCCRAC	1 cut(s)	268
MroXI	GAANNNNTTC	2 cut(s)	198, 1437
MspA1I	CMGCKG	1 cut(s)	1921
MspCI	CTTAAG	1 cut(s)	325
MspI	CCGG	1 cut(s)	1992
MspR9I	CCNGG	1 cut(s)	1993
MunI	CAATTG	3 cut(s)	86, 457, 1185
Mva1269I	GAATGC	2 cut(s)	1323, 1858
MwoI	GCNNNNNNNGC	7 cut(s)	137, 146, 397, 406, 1279, 1880, 1927
NciI	CCSGG	1 cut(s)	1993
NcoI	CCATGG	1 cut(s)	1548
NdeI	CATATG	1 cut(s)	2101
NdeII	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
NheI	GCTAGC	1 cut(s)	136
NlaIII	CATG	9 cut(s)	61, 85, 164, 189, 1085, 1175, 1552, 2233, 2263
NlaIV	GGNNCC	8 cut(s)	292, 436, 602, 871, 948, 1540, 1683, 1684
NmeAIII	GCCGAG	1 cut(s)	1608
NmuCI	GTSAC	4 cut(s)	175, 253, 882, 1022
NspI	RCATGY	1 cut(s)	2233
PaeR7I	CTCGAG	1 cut(s)	614
PaqCI	CACCTGC	1 cut(s)	236
PciI	ACATGT	1 cut(s)	2229
PcsI	WCGNNNNNNNCGW	1 cut(s)	1635
PctI	GAATGC	2 cut(s)	1323, 1858
PdmI	GAANNNNTTC	2 cut(s)	198, 1437
PfeI	GAWTC	7 cut(s)	169, 1198, 1459, 1570, 1717, 1777, 2184
PflMI	CCANNNNNTGG	1 cut(s)	879
PkrI	GCNGC	3 cut(s)	634, 1272, 2248
PleI	GAGTC	3 cut(s)	96, 1881, 1931
PpsI	GAGTC	3 cut(s)	96, 1881, 1931
Ppu21I	YACGTR	1 cut(s)	692
PpuMI	RGGWCCY	1 cut(s)	1682
PscI	ACATGT	1 cut(s)	2229
Psp5II	RGGWCCY	1 cut(s)	1682
PspFI	CCCAGC	1 cut(s)	268
PspN4I	GGNNCC	8 cut(s)	292, 436, 602, 871, 948, 1540, 1683, 1684
PspPI	GGNCC	3 cut(s)	870, 1682, 1729
PspPPI	RGGWCCY	1 cut(s)	1682
PsrI	GAACNNNNNNTAC	2 cut(s)	1775, 1807
PstI	CTGCAG	1 cut(s)	233
PstNI	CAGNNNCTG	1 cut(s)	1874
PsuI	RGATCY	4 cut(s)	290, 582, 1144, 2168
RsaI	GTAC	3 cut(s)	1793, 1830, 2177
RsaNI	GTAC	3 cut(s)	1792, 1829, 2176
SalI	GTCGAC	1 cut(s)	234
SatI	GCNGC	3 cut(s)	633, 1271, 2247
Sau3AI	GATC	6 cut(s)	290, 582, 1047, 1144, 1977, 2168
Sau96I	GGNCC	3 cut(s)	870, 1682, 1729
SchI	GAGTC	3 cut(s)	96, 1881, 1931
ScrFI	CCNGG	1 cut(s)	1993
SduI	GDGCHC	1 cut(s)	275
SfaNI	GCATC	4 cut(s)	1121, 1188, 1260, 1404
SfcI	CTRYAG	2 cut(s)	229, 627
Sfr274I	CTCGAG	1 cut(s)	614
SinI	GGWCC	2 cut(s)	1682, 1729
SlaI	CTCGAG	1 cut(s)	614
SmlI	CTYRAG	5 cut(s)	325, 341, 614, 1027, 1772
SmoI	CTYRAG	5 cut(s)	325, 341, 614, 1027, 1772
SsiI	CCGC	5 cut(s)	1110, 1472, 1839, 1893, 1919
SspMI	CTAG	8 cut(s)	137, 278, 660, 753, 1385, 1409, 1574, 1905
StyD4I	CCNGG	1 cut(s)	1991
StyI	CCWWGG	3 cut(s)	878, 1408, 1548
TaiI	ACGT	3 cut(s)	694, 1106, 1590
TaqI	TCGA	7 cut(s)	105, 235, 615, 768, 1140, 1720, 1912
TatI	WGTACW	1 cut(s)	2175
TfiI	GAWTC	7 cut(s)	169, 1198, 1459, 1570, 1717, 1777, 2184
TscAI	CASTG	3 cut(s)	923, 1427, 2243
TseFI	GTSAC	4 cut(s)	175, 253, 882, 1022
TseI	GCWGC	3 cut(s)	632, 1270, 2246
Tsp45I	GTSAC	4 cut(s)	175, 253, 882, 1022
TspGWI	ACGGA	2 cut(s)	134, 470
TspRI	CASTG	3 cut(s)	923, 1427, 2243
Van91I	CCANNNNNTGG	1 cut(s)	879
Vha464I	CTTAAG	1 cut(s)	325
VpaK11BI	GGWCC	2 cut(s)	1682, 1729
XapI	RAATTY	7 cut(s)	52, 510, 786, 952, 1342, 1415, 1561
XbaI	TCTAGA	1 cut(s)	1384
XceI	RCATGY	1 cut(s)	2233
XhoI	CTCGAG	1 cut(s)	614
XmaJI	CCTAGG	1 cut(s)	1408
XmiI	GTMKAC	2 cut(s)	235, 1579
XmnI	GAANNNNTTC	2 cut(s)	198, 1437
XspI	CTAG	8 cut(s)	137, 278, 660, 753, 1385, 1409, 1574, 1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.