Rorug01G0328200

Protein cornichon homolog 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002446
Physical Location & Seq
Forward (+)
44723317 .. 44726085
2769 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0328200.1

Sequence Viewer

Length: 2769 bp
ATGGCTGAAGCACTAGTTAGCGTTCTCCTAGAACGTTTGGCTACTATCACCATGGATAAGTTCCTAGGAGAGTTAAAAATGGTCACTGGAGTTGAGGAAGCAGTCACAACGCTTACCCGCAATCTCAAAGCAATTCAAGCTGTGCTCAAGAACGCAGAGGCGAGACAAGCAGTGGAGGCCGACGTTGGACATTGGCTGAATGAACTGAAAGAAGTTTCCCACGAGATGGATAATGTGTTGGATGAGTGGAGCACCCAAGTCCTAAAGCAAAAAATGGAGGGTGAAAATGTGAAGAAGGTATGTTGCCCCTCTTTTTCATCTTGCTTTAGATTTGGCCAAGTCAGTCGGTTGAATAATCGTCGTGATATTGCTGTGAGGATAAAAAAGCTAGATGAAAAATTAGCTTTGATTGATAAGGAAAAACATAGATTTAACTTTCAAAACAACACAACAAGAGGCCCTAAAATACCTCGACAAGAAACTACATGTTTTCCCAGTGATAAGATATTTGGTCGAGAAAAGGAAAATAACATTATACTAAGCAAGTTGCTAAGTGAGAGTAGTCAAGATTGTGAGGTCCCTCTTATCATCCCTATTGTAGGGATGGGGGGAATGGGGAAAACAACTCTTTCCCAACTCGTCTATAATGACGAAAAAGTGAAAGCCCATTTTGATAAGAGAATATGGGTTTGTGTGTCAGACCCTTTTAATGAGGTCAAGATTGCTAGAGCTATTGTCGAAGGTCTAGACAAAGATAATACCTCAAAAACTTCAAATAGCTTGCAAATTTTGATGCAATGTATACATACATTGATTCAAGGAAAAAAGTTTCTACTTGTCTCAGATGATGTGTGGAACCCAGACCACACTCAATGGGAAGAATTAGTTAAACCTTTTCGTGATGGTGCTATGGGTAGTAGAGTACTAGTGACTACTCGAAATGAGGAAGTTGCTACTCTGATGAAAGCAACTGTTCATGTGATCCATATTAAGCAATTGAGTGAAGAATTTTGTTCGTCATTGTTTTATTACAATGCGGGCATAGACATAGGTGGTGAGTCTAAAATGTTACAAGATGTTGGTGAAAAAATTGTGAAAAAGTGTGATGGCTTGCCTCTTGCTGCAAAGACATTAGGTAGCCTAATGCGCGAGAAAAAAACATTTAAAGAGTGGGAAGATGTTTTAAATAGTAAGTTGTGGGAGCTTGAAGATATTGAAAAACAAGTTTTTCGACCACTATTATTGAGTTATAATGATTTGACCCAAGAAATCAGAAATTGTCTTTTATATTGTGTTATCTTTCCAAAAGATTATGTGTATGATAGGGATAACTTGGTTGAGTTGTGGATGTCGCAAAATTATTTGAATGTGGAAGGAAGCAAAGAAATGAAAAGACTTGGTCAAAAGTATTTTGATAAATTAGAAATGCGATCTTTTTTCCAAGAAGTTGAGGTGGATGAATATGGGAAAACAAAGTGTAAAATACATGATATTATACATGACTTTATGTTGTTCATGACGAAAAATGAATTTTTGATTGTGAATGTTGGGCAACCTTTCCTCCCGAGTGTAAATGAAGAGGTTCGTCATTTGAACGAAAAGATTCGTCATTTGACTCTAATCAATTTCGATCATTCCGACATTTTGGATAATTTTCGCAGCTGTGAAAATTTGCGTACCCTCGTTGTTTTGGATTATAGTCATGGTTCTGATTTTTCCATTGGTCAAAGAGAGATTGTGCAGTTGAAATACGTTAGGACATTAACATGGTTGAGAACTGGGATTGAGGCAATTCCAAAGGAGATAAGTGGATTGATCCATTTGAGGTATCTTGATTTATCGGAAAACTGGAGGTTGGAGGAATTACCGGACACCATGGGTAGCTTATGCAATCTGCAAACCTTGCGACTTGTTAATAGTTATCGCCTCAAGAGAGTAGATTTGGGAAGGCTAATTAACTTGAGGCATCTTTGTGTCCGCGACTGTGACAAGCTAAAGCTAAAGGGTATAGAGAGACTAACAAATCTGCAAACGTTAGATCAGTTTTATGTCCAAGCTGGTGATGAAGGAAACAAGTTGGAACATCTGAAAAACTTGAACGAGCTTCAAGGACGTCTTACTATTACATATATGGGAGGAGAGAAAGTGGGTGAGGGAGATGCAGCGGTCATTGTTAATAAGGCAAACCTCCTTCATTTGGTCCTAGCTGTTGGCTTCGATGGGCAATGGGATCTGAAGGCCCTACAACCACGTTCAAGTTTGGAATCTTTGAGTATTGATAGATGTATCTTGTCGACCGATTGGTGGTCGTCTTTACACAGCTTGAGACTGCTTAAGGTTTCATTTTGTTACTTTTTGCCTTCTTTAGGAAATCTGGCATCCCTTGAATCATTGAATATTAAGGACATGTATGTGAGTAAGGTAGGAGTTGAGTTTTTGGGAATACATCATCATGATCAATCAGAAACTAGTTGGAGGATGCAAACGTCATTCCCGAAATTGAAGCAACTCACCTTCAATAACATGTATGACTGGAAAGAGTGGGAAGGAGTGAAGGAGGATTCTGACAAGATGGCAATAATAATGCCATGCCTTTCTGAGTTGACAATTTTTAGGTGCGATATGCTAAAAGCACTGCCGGAATTCTTGTGGAAGACACCACTTCAGAAATTGCACATCAGCCGATCTAGAATTCTCCAGAAACTATACAAACAAGGAATAGGTGAGCAGTGGGCCAAGATTTCTCACATCCCAACCATCAATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cornichon

Protein Analysis

922

Amino Acids

106.37

Weight (kDa)

6.69

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 99 1.4e-19 Rx N-terminal domain
NB-ARC PF00931 178 - 343 1e-36 NB-ARC domain
WHD_DRP PF23559 433 - 502 5.7e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 600 - 840 2.5e-17 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 693 - 803 5e-11 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1251
AatII GACGTC 1 cut(s) 2116
AccB7I CCANNNNNTGG 1 cut(s) 226
AccI GTMKAC 2 cut(s) 802, 2294
AccII CGCG 2 cut(s) 1149, 1980
AciI CCGC 4 cut(s) 118, 1037, 1978, 2165
AclI AACGTT 2 cut(s) 34, 2033
AclWI GGATC 3 cut(s) 976, 1810, 2238
AcoI YGGCCR 1 cut(s) 334
AcsI RAATTY 6 cut(s) 786, 1007, 1529, 1669, 2642, 2691
AcuI CTGAAG 3 cut(s) 27, 2255, 2648
AcyI GRCGYC 1 cut(s) 2113
AfaI GTAC 2 cut(s) 924, 1678
AfiI CCNNNNNNNGG 5 cut(s) 226, 599, 2197, 2304, 2366
AflII CTTAAG 1 cut(s) 2333
AflIII ACRYGT 3 cut(s) 485, 2406, 2523
AhlI ACTAGT 3 cut(s) 13, 925, 2468
Alw21I GWGCWC 2 cut(s) 147, 254
Alw26I GTCTC 4 cut(s) 157, 844, 2008, 2320
AlwI GGATC 3 cut(s) 976, 1810, 2238
Ama87I CYCGRG 1 cut(s) 1564
AoxI GGCC 5 cut(s) 177, 334, 457, 2238, 2733
ApeKI GCWGC 3 cut(s) 1121, 1659, 2162
ApoI RAATTY 6 cut(s) 786, 1007, 1529, 1669, 2642, 2691
Asp700I GAANNNNTTC 2 cut(s) 1581, 1602
AspA2I CCTAGG 1 cut(s) 64
AspLEI GCGC 1 cut(s) 1149
AspS9I GGNCC 5 cut(s) 458, 577, 2200, 2239, 2733
AsuHPI GGTGA 8 cut(s) 40, 293, 1067, 1094, 2072, 2162, 2503, 2735
AvaI CYCGRG 1 cut(s) 1564
AvaII GGWCC 2 cut(s) 577, 2200
AvrII CCTAGG 1 cut(s) 64
BalI TGGCCA 1 cut(s) 336
BauI CACGAG 1 cut(s) 221
BbsI GAAGAC 1 cut(s) 2660
Bbv12I GWGCWC 2 cut(s) 147, 254
BbvI GCAGC 3 cut(s) 1108, 1671, 2174
BccI CCATC 7 cut(s) 220, 598, 896, 1100, 2213, 2566, 2765
BclI TGATCA 1 cut(s) 2455
BcoDI GTCTC 4 cut(s) 157, 844, 2008, 2320
BcuI ACTAGT 3 cut(s) 13, 925, 2468
BfrI CTTAAG 1 cut(s) 2333
BisI GCNGC 3 cut(s) 1122, 1660, 2163
BlnI CCTAGG 1 cut(s) 64
BlsI GCNGC 3 cut(s) 1123, 1661, 2164
BmcAI AGTACT 1 cut(s) 924
Bme18I GGWCC 2 cut(s) 577, 2200
BmeT110I CYCGRG 1 cut(s) 1564
BmgT120I GGNCC 5 cut(s) 458, 577, 2200, 2239, 2733
BmiI GGNNCC 2 cut(s) 579, 857
BmrI ACTGGG 2 cut(s) 489, 1788
BmsI GCATC 5 cut(s) 783, 1975, 2149, 2387, 2469
BmuI ACTGGG 2 cut(s) 489, 1788
BpiI GAAGAC 1 cut(s) 2660
BpmI CTGGAG 3 cut(s) 108, 1870, 2681
BpuEI CTTGAG 4 cut(s) 131, 1913, 1981, 2344
BsaHI GRCGYC 1 cut(s) 2113
BsaJI CCNNGG 3 cut(s) 51, 64, 1875
BsaWI WCCGGW 1 cut(s) 1867
BsaXI ACNNNNNCTCC 4 cut(s) 1545, 1575, 2130, 2160
Bsc4I CCNNNNNNNGG 5 cut(s) 226, 599, 2197, 2304, 2366
Bse1I ACTGG 5 cut(s) 91, 495, 1783, 1853, 2537
Bse3DI GCAATG 2 cut(s) 803, 2231
BseDI CCNNGG 3 cut(s) 51, 64, 1875
BseGI GGATG 8 cut(s) 247, 588, 609, 1353, 1462, 2378, 2484, 2748
BseLI CCNNNNNNNGG 5 cut(s) 226, 599, 2197, 2304, 2366
BseMI GCAATG 2 cut(s) 803, 2231
BseMII CTCAG 2 cut(s) 855, 2589
BseNI ACTGG 5 cut(s) 91, 495, 1783, 1853, 2537
BseRI GAGGAG 1 cut(s) 2151
BseXI GCAGC 3 cut(s) 1108, 1671, 2174
BsgI GTGCAG 1 cut(s) 1760
Bsh1236I CGCG 2 cut(s) 1149, 1980
Bsh1285I CGRYCG 1 cut(s) 2298
BshFI GGCC 5 cut(s) 179, 336, 459, 2240, 2735
BsiEI CGRYCG 1 cut(s) 2298
BsiHKAI GWGCWC 2 cut(s) 147, 254
BsiHKCI CYCGRG 1 cut(s) 1564
BsiSI CCGG 2 cut(s) 1868, 2639
BslFI GGGAC 1 cut(s) 563
BslI CCNNNNNNNGG 5 cut(s) 226, 599, 2197, 2304, 2366
BsmAI GTCTC 4 cut(s) 157, 844, 2008, 2320
BsmFI GGGAC 1 cut(s) 563
BsnI GGCC 5 cut(s) 179, 336, 459, 2240, 2735
BsoBI CYCGRG 1 cut(s) 1564
Bsp1286I GDGCHC 2 cut(s) 147, 254
Bsp143I GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
Bsp19I CCATGG 2 cut(s) 51, 1875
BspACI CCGC 4 cut(s) 118, 1037, 1978, 2165
BspANI GGCC 5 cut(s) 179, 336, 459, 2240, 2735
BspCNI CTCAG 2 cut(s) 854, 2590
BspFNI CGCG 2 cut(s) 1149, 1980
BspHI TCATGA 2 cut(s) 1515, 2452
BspLI GGNNCC 2 cut(s) 579, 857
BspPI GGATC 3 cut(s) 976, 1810, 2238
BspTI CTTAAG 1 cut(s) 2333
BsrDI GCAATG 2 cut(s) 803, 2231
BsrI ACTGG 5 cut(s) 91, 495, 1783, 1853, 2537
BssECI CCNNGG 3 cut(s) 51, 64, 1875
BssMI GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
BssNAI GTATAC 1 cut(s) 803
BssNI GRCGYC 1 cut(s) 2113
BssSI CACGAG 1 cut(s) 221
BssT1I CCWWGG 3 cut(s) 51, 64, 1875
Bst1107I GTATAC 1 cut(s) 803
Bst2BI CACGAG 1 cut(s) 221
Bst4CI ACNGT 2 cut(s) 973, 1985
Bst6I CTCTTC 1 cut(s) 1572
BstACI GRCGYC 1 cut(s) 2113
BstAFI CTTAAG 1 cut(s) 2333
BstAPI GCANNNNNTGC 1 cut(s) 1903
BstC8I GCNNGC 3 cut(s) 782, 1039, 1112
BstDEI CTNAG 4 cut(s) 539, 551, 841, 2598
BstDSI CCRYGG 2 cut(s) 51, 1875
BstENI CCTNNNNNAGG 2 cut(s) 597, 2364
BstF5I GGATG 8 cut(s) 247, 588, 609, 1353, 1462, 2378, 2484, 2748
BstFNI CGCG 2 cut(s) 1149, 1980
BstHHI GCGC 1 cut(s) 1149
BstKTI GATC 8 cut(s) 984, 1433, 1633, 1818, 2041, 2233, 2458, 2687
BstMAI GTCTC 4 cut(s) 157, 844, 2008, 2320
BstMBI GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
BstMCI CGRYCG 1 cut(s) 2298
BstMWI GCNNNNNNNGC 5 cut(s) 137, 167, 176, 1146, 1903
BstNSI RCATGY 3 cut(s) 489, 2410, 2527
BstUI CGCG 2 cut(s) 1149, 1980
BstV1I GCAGC 3 cut(s) 1108, 1671, 2174
BstV2I GAAGAC 1 cut(s) 2660
BstX2I RGATCY 1 cut(s) 2230
BstYI RGATCY 1 cut(s) 2230
BstZ17I GTATAC 1 cut(s) 803
BsuRI GGCC 5 cut(s) 179, 336, 459, 2240, 2735
BtgI CCRYGG 2 cut(s) 51, 1875
BtsCI GGATG 8 cut(s) 247, 588, 609, 1353, 1462, 2378, 2484, 2748
BtsI GCAGTG 3 cut(s) 177, 2633, 2735
BtsIMutI CAGTG 5 cut(s) 84, 177, 502, 2633, 2735
Cac8I GCNNGC 3 cut(s) 782, 1039, 1112
CciI TCATGA 2 cut(s) 1515, 2452
CfoI GCGC 1 cut(s) 1149
Cfr13I GGNCC 5 cut(s) 458, 577, 2200, 2239, 2733
Csp6I GTAC 2 cut(s) 923, 1677
CspCI CAANNNNNGTGG 2 cut(s) 1224, 1259
CviQI GTAC 2 cut(s) 923, 1677
DdeI CTNAG 4 cut(s) 539, 551, 841, 2598
DpnI GATC 8 cut(s) 983, 1432, 1632, 1817, 2040, 2232, 2457, 2686
DpnII GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
DraI TTTAAA 2 cut(s) 1165, 1185
EaeI YGGCCR 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 1572
EarI CTCTTC 1 cut(s) 1572
Eco130I CCWWGG 3 cut(s) 51, 64, 1875
Eco47I GGWCC 2 cut(s) 577, 2200
Eco57I CTGAAG 3 cut(s) 27, 2255, 2648
Eco88I CYCGRG 1 cut(s) 1564
EcoNI CCTNNNNNAGG 2 cut(s) 597, 2364
EcoO109I RGGNCCY 3 cut(s) 458, 577, 2239
EcoRI GAATTC 2 cut(s) 2642, 2691
EcoT14I CCWWGG 3 cut(s) 51, 64, 1875
ErhI CCWWGG 3 cut(s) 51, 64, 1875
FalI AAGNNNNNCTT 2 cut(s) 2100, 2132
FaqI GGGAC 1 cut(s) 563
FauI CCCGC 2 cut(s) 125, 1030
FbaI TGATCA 1 cut(s) 2455
FblI GTMKAC 2 cut(s) 802, 2294
Fnu4HI GCNGC 3 cut(s) 1122, 1660, 2163
FokI GGATG 8 cut(s) 254, 575, 616, 1360, 1469, 2365, 2491, 2735
Fsp4HI GCNGC 3 cut(s) 1122, 1660, 2163
GlaI GCGC 1 cut(s) 1148
GluI GCNGC 3 cut(s) 1122, 1660, 2163
GsuI CTGGAG 3 cut(s) 108, 1870, 2681
HaeIII GGCC 5 cut(s) 179, 336, 459, 2240, 2735
HapII CCGG 2 cut(s) 1868, 2639
HhaI GCGC 1 cut(s) 1149
Hin1I GRCGYC 1 cut(s) 2113
Hin6I GCGC 1 cut(s) 1147
HinP1I GCGC 1 cut(s) 1147
HincII GTYRAC 2 cut(s) 2295, 2604
HindII GTYRAC 2 cut(s) 2295, 2604
HinfI GANTC 7 cut(s) 814, 1058, 1603, 1615, 2264, 2387, 2561
HpaII CCGG 2 cut(s) 1868, 2639
HphI GGTGA 8 cut(s) 40, 293, 1067, 1094, 2072, 2162, 2503, 2735
Hpy166II GTNNAC 3 cut(s) 803, 2295, 2604
Hpy8I GTNNAC 3 cut(s) 803, 2295, 2604
Hpy99I CGWCG 2 cut(s) 185, 363
HpyCH4III ACNGT 2 cut(s) 973, 1985
HpyCH4IV ACGT 7 cut(s) 34, 183, 1752, 2033, 2113, 2251, 2486
HpyF10VI GCNNNNNNNGC 5 cut(s) 137, 167, 176, 1146, 1903
HpyF3I CTNAG 4 cut(s) 539, 551, 841, 2598
HpySE526I ACGT 7 cut(s) 34, 183, 1752, 2033, 2113, 2251, 2486
Hsp92I GRCGYC 1 cut(s) 2113
HspAI GCGC 1 cut(s) 1147
Ksp22I TGATCA 1 cut(s) 2455
Kzo9I GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
LmnI GCTCC 2 cut(s) 249, 1201
Lsp1109I GCAGC 3 cut(s) 1108, 1671, 2174
LweI GCATC 5 cut(s) 783, 1975, 2149, 2387, 2469
MaeII ACGT 7 cut(s) 34, 183, 1752, 2033, 2113, 2251, 2486
MaeIII GTNAC 6 cut(s) 82, 103, 928, 1068, 1985, 2348
MalI GATC 8 cut(s) 983, 1432, 1632, 1817, 2040, 2232, 2457, 2686
MboI GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
MboII GAAGA 7 cut(s) 304, 890, 1016, 1187, 1220, 1589, 2665
MfeI CAATTG 1 cut(s) 995
MflI RGATCY 1 cut(s) 2230
MhlI GDGCHC 2 cut(s) 147, 254
MlsI TGGCCA 1 cut(s) 336
MluNI TGGCCA 1 cut(s) 336
MlyI GAGTC 2 cut(s) 1067, 1609
MmeI TCCRAC 6 cut(s) 166, 219, 1662, 1836, 2058, 2453
Mox20I TGGCCA 1 cut(s) 336
MroXI GAANNNNTTC 2 cut(s) 1581, 1602
MscI TGGCCA 1 cut(s) 336
MslI CAYNNNNRTG 4 cut(s) 1765, 1971, 2411, 2451
Msp20I TGGCCA 1 cut(s) 336
MspA1I CMGCKG 2 cut(s) 1662, 2165
MspCI CTTAAG 1 cut(s) 2333
MspI CCGG 2 cut(s) 1868, 2639
MunI CAATTG 1 cut(s) 995
MvnI CGCG 2 cut(s) 1149, 1980
MwoI GCNNNNNNNGC 5 cut(s) 137, 167, 176, 1146, 1903
NcoI CCATGG 2 cut(s) 51, 1875
NdeII GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
NlaIV GGNNCC 2 cut(s) 579, 857
NmuCI GTSAC 4 cut(s) 82, 103, 928, 1985
NspI RCATGY 3 cut(s) 489, 2410, 2527
PagI TCATGA 2 cut(s) 1515, 2452
PciI ACATGT 3 cut(s) 485, 2406, 2523
PcsI WCGNNNNNNNCGW 2 cut(s) 1635, 2492
PdmI GAANNNNTTC 2 cut(s) 1581, 1602
PfeI GAWTC 5 cut(s) 814, 1603, 2264, 2387, 2561
PflFI GACNNNGTC 1 cut(s) 1398
PflMI CCANNNNNTGG 1 cut(s) 226
PkrI GCNGC 3 cut(s) 1123, 1661, 2164
PleI GAGTC 2 cut(s) 1066, 1609
PpsI GAGTC 2 cut(s) 1066, 1609
PpuMI RGGWCCY 1 cut(s) 577
PscI ACATGT 3 cut(s) 485, 2406, 2523
PsiI TTATAA 1 cut(s) 1251
Psp1406I AACGTT 2 cut(s) 34, 2033
Psp5II RGGWCCY 1 cut(s) 577
PspN4I GGNNCC 2 cut(s) 579, 857
PspPI GGNCC 5 cut(s) 458, 577, 2200, 2239, 2733
PspPPI RGGWCCY 1 cut(s) 577
PsuI RGATCY 1 cut(s) 2230
PsyI GACNNNGTC 1 cut(s) 1398
PvuII CAGCTG 1 cut(s) 1662
RsaI GTAC 2 cut(s) 924, 1678
RsaNI GTAC 2 cut(s) 923, 1677
RseI CAYNNNNRTG 4 cut(s) 1765, 1971, 2411, 2451
SalI GTCGAC 1 cut(s) 2293
SatI GCNGC 3 cut(s) 1122, 1660, 2163
Sau3AI GATC 8 cut(s) 981, 1430, 1630, 1815, 2038, 2230, 2455, 2684
Sau96I GGNCC 5 cut(s) 458, 577, 2200, 2239, 2733
ScaI AGTACT 1 cut(s) 924
SchI GAGTC 2 cut(s) 1067, 1609
SduI GDGCHC 2 cut(s) 147, 254
SfaNI GCATC 5 cut(s) 783, 1975, 2149, 2387, 2469
SinI GGWCC 2 cut(s) 577, 2200
SmiMI CAYNNNNRTG 4 cut(s) 1765, 1971, 2411, 2451
SmlI CTYRAG 5 cut(s) 146, 1928, 1960, 2323, 2333
SmoI CTYRAG 5 cut(s) 146, 1928, 1960, 2323, 2333
SpeI ACTAGT 3 cut(s) 13, 925, 2468
SsiI CCGC 4 cut(s) 118, 1037, 1978, 2165
SspI AATATT 1 cut(s) 2398
StyI CCWWGG 3 cut(s) 51, 64, 1875
TaaI ACNGT 2 cut(s) 973, 1985
TaiI ACGT 7 cut(s) 37, 186, 1755, 2036, 2116, 2254, 2489
TaqI TCGA 8 cut(s) 472, 514, 738, 937, 1231, 1629, 2217, 2294
TaqII GACCGA 1 cut(s) 2312
TatI WGTACW 1 cut(s) 922
TfiI GAWTC 5 cut(s) 814, 1603, 2264, 2387, 2561
TscAI CASTG 5 cut(s) 91, 177, 502, 2640, 2735
TseFI GTSAC 4 cut(s) 82, 103, 928, 1985
TseI GCWGC 3 cut(s) 1121, 1659, 2162
Tsp45I GTSAC 4 cut(s) 82, 103, 928, 1985
TspRI CASTG 5 cut(s) 91, 177, 502, 2640, 2735
Tth111I GACNNNGTC 1 cut(s) 1398
Van91I CCANNNNNTGG 1 cut(s) 226
Vha464I CTTAAG 1 cut(s) 2333
VpaK11BI GGWCC 2 cut(s) 577, 2200
XagI CCTNNNNNAGG 2 cut(s) 597, 2364
XapI RAATTY 6 cut(s) 786, 1007, 1529, 1669, 2642, 2691
XbaI TCTAGA 2 cut(s) 745, 2687
XceI RCATGY 3 cut(s) 489, 2410, 2527
XmaJI CCTAGG 1 cut(s) 64
XmiI GTMKAC 2 cut(s) 802, 2294
XmnI GAANNNNTTC 2 cut(s) 1581, 1602
ZraI GACGTC 1 cut(s) 2114
ZrmI AGTACT 1 cut(s) 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.