Rorug02G0202800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0005514
Physical Location & Seq
Reverse (-)
18992083 .. 18995676
3594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0202800.1

Sequence Viewer

Length: 1560 bp
ATGGCAAATCCCAAACACTCCCATCTTTCTCTTATCCATCTCATCATCTTCATCATCATCATCATCACTTCATCTCTACCATCACTTGCATCCAACCGTCCCCCACGCTTCCTCGGAAAGTTCTCGCGTTCTTCACCGCCCGATTCTCCGTCACCACCGGAACGACGTCAGCAGAAGCAGCAAAAACTGATCCAATACGAAACCCGATACTTCTCCCAGAATCTCGACCACTTCAGCTTCTCCGAAACCCCGAAATTCCAACAGCGCTACCTCGTCAACGCCGAGCACTGGGTCGGCCCACAACGCCAGGGCCCAATCTTTCTCTACTGCGGCAACGAAGGCGACATCGTATGGTTCGCCGAAAACACCGGCTTCGTCTGGGAACTCGCGCCGCGTTTTGGCGCCATGGTCCTCTTTCCCGAACATCGTTACTATGGAGAGTCAATGCCGTACGGGAGTGAAGAAGAGGCGTACAAGAATGCCACTACGCTGTCGTTTCTTACGGCCGAGCAAGCGCTGGCCGATTTTGCTGTGTTGATCACGGAGCTTAAGCGAGATTGGTCCGCGGAAGGCTGCCCTGTGGTGCTGTTTGGCGGTTCGTATGGCGGAATGTTGGCAGCGTGGATGAGGCTCAAGTATCCCCATATTGCTATCGGTGCACTTGCTTCTTCGGCGCCAATTCTTCAGTTCGAAGATATTGTGCCAACAGAGACGTTTTATGACATTGTCTCCAGTGATTTCAGGCGTGAAAGTAGCAGCTGCTTTAACACTATAAAAGAGTCGTGGGATGCATTAATGACCGAGGGTCAGAAACAAAATGGCCTGCACCAGCTGACAAAAACCTTCCATTTATGTGGAGAATTAAAGAGGACAGAAGATCTTGTAGATTGGTTGGAGTCTGCCTATAGTTATTTGGCGATGGTGAACTACCCATATGGGTCGGAATTTATGATGCCTTTGCCCGGACACCCAATAAGAGAGGTTTGCAGAAAGATTGATGGTTGTCCTGATGGGACTAGCACTTTGGAGCGCATATTTGAAGGCATAAGTGTATATCACAATTACAGTGGAAAAGCTGACTGCTTTGAGCTGGAAGATGAATCTGATGTCGGCACAGATGGTTGGAATTGGCAGGCTTGCACAGAAATGGTTATGCCAATGTCTAGTAGCCGGGATAGAAGCATGTTTCAAACATATGATTATAATTTCTCCTCTTTTCAAGAGTGGTGCTGGAAGCAGTTCAATGTGAAACCAAGGCCTACATGGATAACAACAGAGTTTGGTGGACATGATATTAAGGCCACTTTGAAAAACGTCGGAAGTAACATAATCTTCTCCAATGGCTTATTGGATCCATGGAGTGGTGGCAGTGTTCTCCAGAATGTATCTGAATCTATCGTTGCTCTCGTTACTGAAGAAGGTGCTCATCACATAGACTTGCGATTTTCAACTAAAGGGGATCCTGAATGGTTGGTTGAGCAAAGGGAAAGTGAGATTAAGCTGATACAAGGCTGGTTAGATAATTTCTATCAAGAAAAGAAAGCAGCTTTTGACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

519

Amino Acids

59.28

Weight (kDa)

5.14

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 73 - 496 4.1e-89 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
AatII GACGTC 1 cut(s) 169
AccB1I GGYRCC 2 cut(s) 401, 673
AccB7I CCANNNNNTGG 1 cut(s) 1361
AccII CGCG 4 cut(s) 127, 389, 394, 566
AciI CCGC 7 cut(s) 137, 330, 392, 564, 566, 594, 606
AclWI GGATC 5 cut(s) 184, 1346, 1359, 1454, 1467
AcoI YGGCCR 2 cut(s) 504, 519
AcsI RAATTY 2 cut(s) 254, 944
AcuI CTGAAG 3 cut(s) 217, 668, 1434
AcyI GRCGYC 3 cut(s) 166, 402, 674
AfaI GTAC 2 cut(s) 452, 473
AfeI AGCGCT 2 cut(s) 266, 516
AfiI CCNNNNNNNGG 4 cut(s) 288, 398, 962, 1361
AflII CTTAAG 1 cut(s) 548
AflIII ACRYGT 1 cut(s) 1554
AgsI TTSAA 6 cut(s) 1040, 1190, 1220, 1243, 1309, 1449
AhdI GACNNNNNGTC 1 cut(s) 804
AjnI CCWGG 1 cut(s) 306
AluBI AGCT 8 cut(s) 237, 547, 759, 832, 1076, 1090, 1501, 1547
AluI AGCT 8 cut(s) 237, 547, 759, 832, 1076, 1090, 1501, 1547
Alw21I GWGCWC 3 cut(s) 288, 661, 1426
Alw26I GTCTC 2 cut(s) 704, 733
Alw44I GTGCAC 1 cut(s) 657
AlwI GGATC 5 cut(s) 184, 1346, 1359, 1454, 1467
Aor51HI AGCGCT 2 cut(s) 266, 516
AoxI GGCC 7 cut(s) 295, 310, 504, 519, 820, 1256, 1299
ApaI GGGCCC 1 cut(s) 314
ApaLI GTGCAC 1 cut(s) 657
ApeKI GCWGC 6 cut(s) 178, 573, 617, 756, 759, 1544
ApoI RAATTY 2 cut(s) 254, 944
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
AseI ATTAAT 1 cut(s) 794
Asp700I GAANNNNTTC 1 cut(s) 1238
AspLEI GCGC 6 cut(s) 267, 391, 404, 517, 676, 1032
AspS9I GGNCC 5 cut(s) 296, 310, 311, 409, 561
AsuC2I CCSGG 2 cut(s) 963, 1172
AsuHPI GGTGA 3 cut(s) 126, 144, 934
AsuII TTCGAA 1 cut(s) 690
AvaII GGWCC 2 cut(s) 409, 561
BaeGI GKGCMC 2 cut(s) 314, 661
BamHI GGATCC 2 cut(s) 1351, 1459
BanI GGYRCC 2 cut(s) 401, 673
BanII GRGCYC 1 cut(s) 314
Bbv12I GWGCWC 3 cut(s) 288, 661, 1426
BbvI GCAGC 6 cut(s) 190, 560, 629, 746, 768, 1556
BccI CCATC 7 cut(s) 30, 45, 88, 913, 992, 1004, 1112
BceAI ACGGC 2 cut(s) 433, 519
BciT130I CCWGG 1 cut(s) 308
BciVI GTATCC 1 cut(s) 648
BclI TGATCA 1 cut(s) 537
BcnI CCSGG 2 cut(s) 963, 1172
BcoDI GTCTC 2 cut(s) 704, 733
BfaI CTAG 2 cut(s) 1017, 1164
BfmI CTRYAG 1 cut(s) 904
BfoI RGCGCY 4 cut(s) 268, 405, 518, 677
BfrI CTTAAG 1 cut(s) 548
BfuI GTATCC 1 cut(s) 648
BglII AGATCT 1 cut(s) 877
BisI GCNGC 8 cut(s) 179, 331, 392, 574, 618, 757, 760, 1545
BlsI GCNGC 8 cut(s) 180, 332, 393, 575, 619, 758, 761, 1546
Bme1390I CCNGG 3 cut(s) 308, 963, 1172
Bme18I GGWCC 2 cut(s) 409, 561
BmeRI GACNNNNNGTC 1 cut(s) 804
BmgT120I GGNCC 5 cut(s) 296, 310, 311, 409, 561
BmiI GGNNCC 5 cut(s) 312, 403, 675, 1353, 1461
BmrFI CCNGG 3 cut(s) 308, 963, 1172
BmrI ACTGGG 1 cut(s) 298
BmsI GCATC 3 cut(s) 98, 778, 942
BmuI ACTGGG 1 cut(s) 298
BpmI CTGGAG 2 cut(s) 715, 1361
Bpu14I TTCGAA 1 cut(s) 690
BpuEI CTTGAG 1 cut(s) 617
BpuMI CCSGG 2 cut(s) 963, 1172
BsaHI GRCGYC 3 cut(s) 166, 402, 674
BsaJI CCNNGG 7 cut(s) 112, 307, 405, 564, 801, 1253, 1355
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 2 cut(s) 713, 743
Bsc4I CCNNNNNNNGG 4 cut(s) 288, 398, 962, 1361
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 2 cut(s) 293, 732
BseBI CCWGG 1 cut(s) 308
BseDI CCNNGG 7 cut(s) 112, 307, 405, 564, 801, 1253, 1355
BseGI GGATG 3 cut(s) 89, 630, 793
BseLI CCNNNNNNNGG 4 cut(s) 288, 398, 962, 1361
BseNI ACTGG 2 cut(s) 293, 732
BseRI GAGGAG 1 cut(s) 1201
BseSI GKGCMC 2 cut(s) 314, 661
BseX3I CGGCCG 1 cut(s) 504
BseXI GCAGC 6 cut(s) 190, 560, 629, 746, 768, 1556
BsgI GTGCAG 1 cut(s) 809
Bsh1236I CGCG 4 cut(s) 127, 389, 394, 566
Bsh1285I CGRYCG 1 cut(s) 507
BshFI GGCC 7 cut(s) 297, 312, 506, 521, 822, 1258, 1301
BshNI GGYRCC 2 cut(s) 401, 673
BsiEI CGRYCG 1 cut(s) 507
BsiHKAI GWGCWC 3 cut(s) 288, 661, 1426
BsiSI CCGG 4 cut(s) 158, 369, 963, 1171
BsiWI CGTACG 1 cut(s) 450
BslFI GGGAC 2 cut(s) 84, 1027
BslI CCNNNNNNNGG 4 cut(s) 288, 398, 962, 1361
BsmAI GTCTC 2 cut(s) 704, 733
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 2 cut(s) 84, 1027
BsmI GAATGC 1 cut(s) 484
BsnI GGCC 7 cut(s) 297, 312, 506, 521, 822, 1258, 1301
Bsp119I TTCGAA 1 cut(s) 690
Bsp120I GGGCCC 1 cut(s) 310
Bsp1286I GDGCHC 4 cut(s) 288, 314, 661, 1426
Bsp143I GATC 5 cut(s) 189, 537, 877, 1351, 1459
Bsp19I CCATGG 2 cut(s) 405, 1355
BspACI CCGC 7 cut(s) 137, 330, 392, 564, 566, 594, 606
BspANI GGCC 7 cut(s) 297, 312, 506, 521, 822, 1258, 1301
BspFNI CGCG 4 cut(s) 127, 389, 394, 566
BspLI GGNNCC 5 cut(s) 312, 403, 675, 1353, 1461
BspPI GGATC 5 cut(s) 184, 1346, 1359, 1454, 1467
BspT104I TTCGAA 1 cut(s) 690
BspT107I GGYRCC 2 cut(s) 401, 673
BspTI CTTAAG 1 cut(s) 548
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 2 cut(s) 293, 732
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 7 cut(s) 112, 307, 405, 564, 801, 1253, 1355
BssMI GATC 5 cut(s) 189, 537, 877, 1351, 1459
BssNI GRCGYC 3 cut(s) 166, 402, 674
BssT1I CCWWGG 3 cut(s) 405, 1253, 1355
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 2 cut(s) 98, 1067
Bst6I CTCTTC 1 cut(s) 459
BstACI GRCGYC 3 cut(s) 166, 402, 674
BstAFI CTTAAG 1 cut(s) 548
BstBI TTCGAA 1 cut(s) 690
BstC8I GCNNGC 5 cut(s) 513, 519, 824, 1134, 1138
BstDSI CCRYGG 3 cut(s) 405, 564, 1355
BstF5I GGATG 3 cut(s) 89, 630, 793
BstFNI CGCG 4 cut(s) 127, 389, 394, 566
BstH2I RGCGCY 4 cut(s) 268, 405, 518, 677
BstHHI GCGC 6 cut(s) 267, 391, 404, 517, 676, 1032
BstKTI GATC 5 cut(s) 192, 540, 880, 1354, 1462
BstMAI GTCTC 2 cut(s) 704, 733
BstMBI GATC 5 cut(s) 189, 537, 877, 1351, 1459
BstMCI CGRYCG 1 cut(s) 507
BstMWI GCNNNNNNNGC 7 cut(s) 178, 303, 339, 512, 527, 656, 671
BstNI CCWGG 1 cut(s) 308
BstNSI RCATGY 2 cut(s) 1186, 1558
BstSCI CCNGG 3 cut(s) 306, 961, 1170
BstSFI CTRYAG 1 cut(s) 904
BstSLI GKGCMC 2 cut(s) 314, 661
BstUI CGCG 4 cut(s) 127, 389, 394, 566
BstV1I GCAGC 6 cut(s) 190, 560, 629, 746, 768, 1556
BstX2I RGATCY 3 cut(s) 877, 1351, 1459
BstXI CCANNNNNNTGG 1 cut(s) 854
BstYI RGATCY 3 cut(s) 877, 1351, 1459
BstZI CGGCCG 1 cut(s) 504
BsuI GTATCC 1 cut(s) 648
BsuRI GGCC 7 cut(s) 297, 312, 506, 521, 822, 1258, 1301
BtgI CCRYGG 3 cut(s) 405, 564, 1355
BtgZI GCGATG 1 cut(s) 932
BtsCI GGATG 3 cut(s) 89, 630, 793
BtsI GCAGTG 1 cut(s) 1375
BtsIMutI CAGTG 4 cut(s) 286, 739, 1072, 1375
Cac8I GCNNGC 5 cut(s) 513, 519, 824, 1134, 1138
CfoI GCGC 6 cut(s) 267, 391, 404, 517, 676, 1032
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 5 cut(s) 296, 310, 311, 409, 561
Cfr42I CCGCGG 1 cut(s) 567
Csp6I GTAC 2 cut(s) 451, 472
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviAII CATG 6 cut(s) 406, 1183, 1263, 1289, 1356, 1555
CviQI GTAC 2 cut(s) 451, 472
DinI GGCGCC 2 cut(s) 403, 675
DpnI GATC 5 cut(s) 191, 539, 879, 1353, 1461
DpnII GATC 5 cut(s) 189, 537, 877, 1351, 1459
DriI GACNNNNNGTC 1 cut(s) 804
EaeI YGGCCR 2 cut(s) 504, 519
EagI CGGCCG 1 cut(s) 504
Eam1104I CTCTTC 1 cut(s) 459
Eam1105I GACNNNNNGTC 1 cut(s) 804
EarI CTCTTC 1 cut(s) 459
EciI GGCGGA 1 cut(s) 621
EclXI CGGCCG 1 cut(s) 504
Eco130I CCWWGG 3 cut(s) 405, 1253, 1355
Eco147I AGGCCT 1 cut(s) 1258
Eco24I GRGCYC 1 cut(s) 314
Eco47I GGWCC 2 cut(s) 409, 561
Eco47III AGCGCT 2 cut(s) 266, 516
Eco52I CGGCCG 1 cut(s) 504
Eco57I CTGAAG 3 cut(s) 217, 668, 1434
EcoO109I RGGNCCY 1 cut(s) 310
EcoRII CCWGG 1 cut(s) 306
EcoT14I CCWWGG 3 cut(s) 405, 1253, 1355
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 1 cut(s) 314
EgeI GGCGCC 2 cut(s) 403, 675
EheI GGCGCC 2 cut(s) 403, 675
ErhI CCWWGG 3 cut(s) 405, 1253, 1355
Esp3I CGTCTC 1 cut(s) 704
FaeI CATG 6 cut(s) 409, 1186, 1266, 1292, 1359, 1558
FaqI GGGAC 2 cut(s) 84, 1027
FatI CATG 6 cut(s) 405, 1182, 1262, 1288, 1355, 1554
FauNDI CATATG 2 cut(s) 934, 1195
FbaI TGATCA 1 cut(s) 537
Fnu4HI GCNGC 8 cut(s) 179, 331, 392, 574, 618, 757, 760, 1545
FokI GGATG 3 cut(s) 76, 637, 800
FriOI GRGCYC 1 cut(s) 314
Fsp4HI GCNGC 8 cut(s) 179, 331, 392, 574, 618, 757, 760, 1545
FspBI CTAG 2 cut(s) 1017, 1164
GlaI GCGC 6 cut(s) 266, 390, 403, 516, 675, 1031
GluI GCNGC 8 cut(s) 179, 331, 392, 574, 618, 757, 760, 1545
GsuI CTGGAG 2 cut(s) 715, 1361
HaeII RGCGCY 4 cut(s) 268, 405, 518, 677
HaeIII GGCC 7 cut(s) 297, 312, 506, 521, 822, 1258, 1301
HapII CCGG 4 cut(s) 158, 369, 963, 1171
HhaI GCGC 6 cut(s) 267, 391, 404, 517, 676, 1032
Hin1I GRCGYC 3 cut(s) 166, 402, 674
Hin1II CATG 6 cut(s) 409, 1186, 1266, 1292, 1359, 1558
Hin6I GCGC 6 cut(s) 265, 389, 402, 515, 674, 1030
HinP1I GCGC 6 cut(s) 265, 389, 402, 515, 674, 1030
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 7 cut(s) 143, 220, 440, 779, 896, 1100, 1391
HpaII CCGG 4 cut(s) 158, 369, 963, 1171
HphI GGTGA 3 cut(s) 126, 144, 934
Hpy166II GTNNAC 4 cut(s) 277, 659, 925, 1286
Hpy188I TCNGA 7 cut(s) 116, 244, 810, 943, 1105, 1319, 1390
Hpy188III TCNNGA 7 cut(s) 224, 419, 1007, 1220, 1378, 1463, 1532
Hpy8I GTNNAC 4 cut(s) 277, 659, 925, 1286
Hpy99I CGWCG 2 cut(s) 168, 1319
HpyAV CCTTC 5 cut(s) 332, 563, 853, 1034, 1412
HpyCH4III ACNGT 2 cut(s) 98, 1067
HpyCH4IV ACGT 3 cut(s) 166, 713, 1314
HpyCH4V TGCA 6 cut(s) 89, 659, 791, 826, 987, 1140
HpyF10VI GCNNNNNNNGC 7 cut(s) 178, 303, 339, 512, 527, 656, 671
HpySE526I ACGT 3 cut(s) 166, 713, 1314
Hsp92I GRCGYC 3 cut(s) 166, 402, 674
Hsp92II CATG 6 cut(s) 409, 1186, 1266, 1292, 1359, 1558
HspAI GCGC 6 cut(s) 265, 389, 402, 515, 674, 1030
KasI GGCGCC 2 cut(s) 401, 673
Ksp22I TGATCA 1 cut(s) 537
KspI CCGCGG 1 cut(s) 567
Kzo9I GATC 5 cut(s) 189, 537, 877, 1351, 1459
LmnI GCTCC 2 cut(s) 544, 1027
Lsp1109I GCAGC 6 cut(s) 190, 560, 629, 746, 768, 1556
LweI GCATC 3 cut(s) 98, 778, 942
MaeI CTAG 2 cut(s) 1017, 1164
MaeII ACGT 3 cut(s) 166, 713, 1314
MaeIII GTNAC 4 cut(s) 150, 428, 1322, 1408
MalI GATC 5 cut(s) 191, 539, 879, 1353, 1461
MboI GATC 5 cut(s) 189, 537, 877, 1351, 1459
MflI RGATCY 3 cut(s) 877, 1351, 1459
MhlI GDGCHC 4 cut(s) 288, 314, 661, 1426
MluCI AATT 8 cut(s) 254, 678, 860, 944, 1060, 1126, 1204, 1522
Mly113I GGCGCC 2 cut(s) 402, 674
MlyI GAGTC 3 cut(s) 449, 788, 905
MmeI TCCRAC 6 cut(s) 117, 283, 873, 921, 1103, 1297
MnlI CCTC 9 cut(s) 122, 281, 422, 460, 621, 796, 861, 973, 1222
Mph1103I ATGCAT 1 cut(s) 793
MroXI GAANNNNTTC 1 cut(s) 1238
MseI TTAA 6 cut(s) 549, 765, 794, 863, 1296, 1497
MslI CAYNNNNRTG 2 cut(s) 852, 1145
MspA1I CMGCKG 3 cut(s) 566, 759, 832
MspCI CTTAAG 1 cut(s) 548
MspI CCGG 4 cut(s) 158, 369, 963, 1171
MspR9I CCNGG 3 cut(s) 308, 963, 1172
Mva1269I GAATGC 1 cut(s) 484
MvaI CCWGG 1 cut(s) 308
MvnI CGCG 4 cut(s) 127, 389, 394, 566
MwoI GCNNNNNNNGC 7 cut(s) 178, 303, 339, 512, 527, 656, 671
NarI GGCGCC 2 cut(s) 402, 674
NciI CCSGG 2 cut(s) 963, 1172
NcoI CCATGG 2 cut(s) 405, 1355
NdeI CATATG 2 cut(s) 934, 1195
NdeII GATC 5 cut(s) 189, 537, 877, 1351, 1459
NlaIII CATG 6 cut(s) 409, 1186, 1266, 1292, 1359, 1558
NlaIV GGNNCC 5 cut(s) 312, 403, 675, 1353, 1461
NmeAIII GCCGAG 2 cut(s) 307, 532
NmuCI GTSAC 1 cut(s) 150
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 2 cut(s) 1186, 1558
NspV TTCGAA 1 cut(s) 690
PceI AGGCCT 1 cut(s) 1258
PciI ACATGT 1 cut(s) 1554
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 1404
PctI GAATGC 1 cut(s) 484
PdmI GAANNNNTTC 1 cut(s) 1238
PfeI GAWTC 4 cut(s) 143, 220, 1100, 1391
Pfl23II CGTACG 1 cut(s) 450
PflFI GACNNNGTC 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 1361
PkrI GCNGC 8 cut(s) 180, 332, 393, 575, 619, 758, 761, 1546
PleI GAGTC 3 cut(s) 448, 787, 904
PluTI GGCGCC 2 cut(s) 405, 677
PpsI GAGTC 3 cut(s) 448, 787, 904
PscI ACATGT 1 cut(s) 1554
PshBI ATTAAT 1 cut(s) 794
PsiI TTATAA 1 cut(s) 1203
Psp6I CCWGG 1 cut(s) 306
PspGI CCWGG 1 cut(s) 306
PspLI CGTACG 1 cut(s) 450
PspN4I GGNNCC 5 cut(s) 312, 403, 675, 1353, 1461
PspOMI GGGCCC 1 cut(s) 310
PspPI GGNCC 5 cut(s) 296, 310, 311, 409, 561
PsuI RGATCY 3 cut(s) 877, 1351, 1459
PsyI GACNNNGTC 1 cut(s) 725
PvuII CAGCTG 2 cut(s) 759, 832
RsaI GTAC 2 cut(s) 452, 473
RsaNI GTAC 2 cut(s) 451, 472
RseI CAYNNNNRTG 2 cut(s) 852, 1145
SacII CCGCGG 1 cut(s) 567
SaqAI TTAA 6 cut(s) 549, 765, 794, 863, 1296, 1497
SatI GCNGC 8 cut(s) 179, 331, 392, 574, 618, 757, 760, 1545
Sau3AI GATC 5 cut(s) 189, 537, 877, 1351, 1459
Sau96I GGNCC 5 cut(s) 296, 310, 311, 409, 561
SchI GAGTC 3 cut(s) 449, 788, 905
ScrFI CCNGG 3 cut(s) 308, 963, 1172
SduI GDGCHC 4 cut(s) 288, 314, 661, 1426
SfaNI GCATC 3 cut(s) 98, 778, 942
SfcI CTRYAG 1 cut(s) 904
SfoI GGCGCC 2 cut(s) 403, 675
Sfr303I CCGCGG 1 cut(s) 567
SfuI TTCGAA 1 cut(s) 690
SgrBI CCGCGG 1 cut(s) 567
SinI GGWCC 2 cut(s) 409, 561
SmiMI CAYNNNNRTG 2 cut(s) 852, 1145
SmlI CTYRAG 2 cut(s) 548, 632
SmoI CTYRAG 2 cut(s) 548, 632
Sse9I AATT 8 cut(s) 254, 678, 860, 944, 1060, 1126, 1204, 1522
SseBI AGGCCT 1 cut(s) 1258
SsiI CCGC 7 cut(s) 137, 330, 392, 564, 566, 594, 606
SspDI GGCGCC 2 cut(s) 401, 673
SspMI CTAG 2 cut(s) 1017, 1164
StuI AGGCCT 1 cut(s) 1258
StyD4I CCNGG 3 cut(s) 306, 961, 1170
StyI CCWWGG 3 cut(s) 405, 1253, 1355
TaaI ACNGT 2 cut(s) 98, 1067
TaiI ACGT 3 cut(s) 169, 716, 1317
TaqI TCGA 2 cut(s) 225, 690
TaqII GACCGA 1 cut(s) 815
TasI AATT 8 cut(s) 254, 678, 860, 944, 1060, 1126, 1204, 1522
TauI GCSGC 2 cut(s) 333, 394
TfiI GAWTC 4 cut(s) 143, 220, 1100, 1391
Tru1I TTAA 6 cut(s) 549, 765, 794, 863, 1296, 1497
Tru9I TTAA 6 cut(s) 549, 765, 794, 863, 1296, 1497
TscAI CASTG 4 cut(s) 293, 739, 1072, 1375
TseFI GTSAC 1 cut(s) 150
TseI GCWGC 6 cut(s) 178, 573, 617, 756, 759, 1544
Tsp45I GTSAC 1 cut(s) 150
TspDTI ATGAA 3 cut(s) 40, 60, 1113
TspGWI ACGGA 2 cut(s) 138, 557
TspRI CASTG 4 cut(s) 293, 739, 1072, 1375
Tth111I GACNNNGTC 1 cut(s) 725
Van91I CCANNNNNTGG 1 cut(s) 1361
Vha464I CTTAAG 1 cut(s) 548
VneI GTGCAC 1 cut(s) 657
VpaK11BI GGWCC 2 cut(s) 409, 561
VspI ATTAAT 1 cut(s) 794
XapI RAATTY 2 cut(s) 254, 944
XceI RCATGY 2 cut(s) 1186, 1558
XcmI CCANNNNNNNNNTGG 2 cut(s) 1260, 1345
XmnI GAANNNNTTC 1 cut(s) 1238
XspI CTAG 2 cut(s) 1017, 1164
ZraI GACGTC 1 cut(s) 167
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.