Rorug03G0059200

PHD finger-like domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002214
Physical Location & Seq
Forward (+)
4437553 .. 4443832
6280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0059200.1

Sequence Viewer

Length: 2085 bp
ATGGAATGTCAGCGTCGCCTCCACGCCGTTCAGTCCCACCTACTCCCTCCCACCGCCGACGATCCTCAACCCCTCCTTCAGGCCAACATCACCGCCGGCGACTATGCTCACGGGAAGGGCTACAGTGTAGTACTCCCCGAGAAGTTACAAACAGGAAAATGGAATGTGTACAGATCTGCACGATCGCCTTTCGAGCTTGTAACTCGTTTTGCTAAGCATCCGGAGATTGGGACATTGCACGACAACTTTGCACGTTCGGCTGAAACTTTCATAGATCACAAGTATTTGGGTACACGAATTCGGCCTGATGGAACTGTTGGAGAGTACAAATGGATGACATACGGAGAAACAGCAACAGTTCGGGAAGCATTAGGTTCCGGCCTACGGTTAAATGGGATACAAAAAGGAGCTTCTGTGGGACTTTTTTTCATAAACAGACCAGAGTGGTTGATTGTGGATCATGCTTGTTCTGCATATTCGTTCATCTCAGTTCCTTTATACGATACTCTTGGACCTGATGCAGTCAAGTATGTTGTGAATCATGCCAATGTACAAGCAATCTTTTGTTCCCTAGAGAATCTGAAATCATTGTTAAGCTTCCTTTCCGAGATCCCATCTGTAGCTCTTATAGTGGTTGTGGGAGGGGTAGATGAACACTTGCGTTCCCTTCCATCTATAACTGGAGTGAAACTTATGTCATATTTAGAGCTTCTCAGTCAGGGCCGCAGTAGTCTACAGCCTCTTTGCCCTCCTAATCCCGAAGATGTTGCAACCATCTGCTACACAAGCGGTACAACTGGAACACCAAAGGGTGTTGTGTTGACTCATGGAAACTTAATTTCAAGTTGTGCTGGATTCACTCGTGCATTGCAATTCATTTCATCTGATATTTACATATCCTATCTTCCTTTAGCACACATCTATGAGCGAGCTAATCAAATTGTCTTACTGTACTACGGTGGTGCTTGTGGTTTCTACCAGGGGGACAATCTGAAACTGATGGATGACCTGGCTGCATTAAGACCTACAATTTTTGCCAGTGTTCCGCGGTTGTACAATCAAATATATGCTGGAATTACAAATGCTGTTAAAACATCTGGGATTCTAAAGGAGAGACTATTCAGAGCCGCCTACAATTCTAAGAAGCAGTCCGTGATGAGTGGTTCAACATCATCACCAATGTGGGACAGATTTTTATTTAATAAAATCAAGGCAAAGCTTGGAGGACGAATCCGTTTAATGTCATCTGGTGCTTCACCCTTGTCCCCTGATGTCATGGACTTCCTTAGGGTGTGCTTTGGTTGTGAAGTAATTGAAGGATATGGTATGACAGAGACTTCATGTGTCATAAGCATGACCGATGAGGGTGACACATTAATTGGCCATGTTGGTTCCCCTAATGCAGCCTGTGAAGTAAAACTGGTCGATGTCCCTGAAATGAATTACACTTCTGAGGACCAGCCATATCCTCGTGGGGAAATCTGTGTCCGGGGTCCCATTGTCTTCCAAGGCTACTACAAAGATGAAAACCAGACGAAAGAAGTAATTGATGTTGATGGTTGGCTGCATACTGGAGACATTGGTTTGTGGTTAGCTGGAGGCCGGCTTAAGATCATTGATAGGAAAAAGAACATCTTCAAGTTGGCACAGGGTGAGTATGTAGCACCAGAGAAGATTGAGAATGTCTATGCCAAGTGCCAATTTGTTGCTCAATGTTTTGTATACGGTGATAGCTTCAAGTCCTGTCTAGTAGCTATAGTTGCAGTGGATCCGGATGTATTGAAAGAGTGGGCTGCATCTGAAGGCATAAAGTACGAAGATCTCAGACAATTGTGCAATAATCCAAGAGTAAGGTCTGCTGTTTTGGCTGACATGGATGCCATTGGAAAGGAGGCTCAGTTGAGAGGTTTTGAATTTGCAAAAGCTGTGACTTTAGTTCCTGAACCATTCACACTAGAGAATGGCCTTCTCACTCCAACCTTCAAGATCAAGAGGCCTCAAGCAAAGGCACACTTCGCCAAAGCAATATCAAACATGTATTCTGAGCTTTCCATATCTGATGTTGTGACGAAAAAAATTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
PHF5

Protein Analysis

694

Amino Acids

76.47

Weight (kDa)

7.17

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 106 - 506 2.2e-90 AMP-binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 733, 1722
AccII CGCG 1 cut(s) 1048
AccIII TCCGGA 2 cut(s) 220, 1771
AciI CCGC 7 cut(s) 54, 93, 724, 789, 1046, 1048, 1128
AclWI GGATC 5 cut(s) 56, 465, 604, 1763, 1776
AcoI YGGCCR 1 cut(s) 1381
AcsI RAATTY 2 cut(s) 297, 1913
AcuI CTGAAG 2 cut(s) 62, 1821
AdeI CACNNNGTG 1 cut(s) 1652
AfaI GTAC 9 cut(s) 132, 170, 292, 326, 552, 793, 953, 1055, 1814
AfiI CCNNNNNNNGG 3 cut(s) 79, 227, 384
AflII CTTAAG 1 cut(s) 1607
AflIII ACRYGT 1 cut(s) 2034
AgsI TTSAA 8 cut(s) 843, 1167, 1316, 1639, 1738, 1783, 1913, 1984
AjnI CCWGG 2 cut(s) 978, 1008
AleI CACNNNNGTG 1 cut(s) 1180
Alw26I GTCTC 3 cut(s) 1108, 1328, 1569
AlwI GGATC 5 cut(s) 56, 465, 604, 1763, 1776
Ama87I CYCGRG 1 cut(s) 137
Aor13HI TCCGGA 2 cut(s) 220, 1771
AoxI GGCC 8 cut(s) 81, 302, 379, 721, 1381, 1600, 1963, 1994
ApeKI GCWGC 4 cut(s) 1013, 1403, 1564, 1793
ApoI RAATTY 2 cut(s) 297, 1913
AseI ATTAAT 1 cut(s) 1376
Asp700I GAANNNNTTC 1 cut(s) 1634
AspS9I GGNCC 4 cut(s) 512, 721, 1456, 1493
AsuC2I CCSGG 1 cut(s) 1490
AsuHPI GGTGA 6 cut(s) 82, 1167, 1248, 1379, 1664, 1739
AvaI CYCGRG 1 cut(s) 137
AvaII GGWCC 3 cut(s) 512, 1456, 1493
AxyI CCTNAGG 1 cut(s) 1286
BalI TGGCCA 1 cut(s) 1383
BamHI GGATCC 1 cut(s) 1768
BauI CACGAG 2 cut(s) 861, 1470
BbsI GAAGAC 1 cut(s) 1495
BbvI GCAGC 4 cut(s) 1000, 1415, 1551, 1780
BccI CCATC 6 cut(s) 302, 622, 679, 782, 994, 1550
BceAI ACGGC 1 cut(s) 11
BcgI CGANNNNNNTGC 4 cut(s) 230, 264, 749, 783
BciT130I CCWGG 2 cut(s) 980, 1010
BciVI GTATCC 1 cut(s) 390
BcnI CCSGG 1 cut(s) 1490
BcoDI GTCTC 3 cut(s) 1108, 1328, 1569
BfaI CTAG 3 cut(s) 572, 1748, 1955
BfmI CTRYAG 4 cut(s) 121, 618, 734, 1755
BfrI CTTAAG 1 cut(s) 1607
BfuI GTATCC 1 cut(s) 390
BglII AGATCT 2 cut(s) 173, 1819
BisI GCNGC 6 cut(s) 724, 1014, 1128, 1404, 1565, 1794
BlpI GCTNAGC 1 cut(s) 213
BlsI GCNGC 6 cut(s) 725, 1015, 1129, 1405, 1566, 1795
BmcAI AGTACT 1 cut(s) 132
Bme1390I CCNGG 3 cut(s) 980, 1010, 1490
Bme18I GGWCC 3 cut(s) 512, 1456, 1493
BmeT110I CYCGRG 1 cut(s) 137
BmgT120I GGNCC 4 cut(s) 512, 721, 1456, 1493
BmiI GGNNCC 5 cut(s) 376, 1393, 1494, 1495, 1770
BmrFI CCNGG 3 cut(s) 980, 1010, 1490
BmsI GCATC 4 cut(s) 226, 508, 1805, 1867
BpiI GAAGAC 1 cut(s) 1495
BpmI CTGGAG 3 cut(s) 702, 1593, 1617
Bpu1102I GCTNAGC 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 1983
BpuMI CCSGG 1 cut(s) 1490
BsaJI CCNNGG 4 cut(s) 979, 1046, 1489, 1507
BsaWI WCCGGW 2 cut(s) 220, 1771
BsaXI ACNNNNNCTCC 4 cut(s) 399, 429, 1883, 1913
Bsc4I CCNNNNNNNGG 3 cut(s) 79, 227, 384
Bse118I RCCGGY 2 cut(s) 95, 1602
Bse1I ACTGG 5 cut(s) 685, 802, 1038, 1425, 1576
Bse21I CCTNAGG 1 cut(s) 1286
Bse3DI GCAATG 2 cut(s) 233, 866
BseAI TCCGGA 2 cut(s) 220, 1771
BseBI CCWGG 2 cut(s) 980, 1010
BseDI CCNNGG 4 cut(s) 979, 1046, 1489, 1507
BseGI GGATG 5 cut(s) 217, 339, 1009, 1780, 1882
BseLI CCNNNNNNNGG 3 cut(s) 79, 227, 384
BseMI GCAATG 2 cut(s) 233, 866
BseMII CTCAG 6 cut(s) 501, 727, 1443, 1837, 1910, 2034
BseNI ACTGG 5 cut(s) 685, 802, 1038, 1425, 1576
BseXI GCAGC 4 cut(s) 1000, 1415, 1551, 1780
BsgI GTGCAG 1 cut(s) 162
Bsh1236I CGCG 1 cut(s) 1048
Bsh1285I CGRYCG 1 cut(s) 185
BshFI GGCC 8 cut(s) 83, 304, 381, 723, 1383, 1602, 1965, 1996
BsiEI CGRYCG 1 cut(s) 185
BsiHKCI CYCGRG 1 cut(s) 137
BsiSI CCGG 6 cut(s) 96, 221, 378, 1489, 1603, 1772
BslFI GGGAC 8 cut(s) 19, 244, 432, 998, 1199, 1249, 1415, 1479
BslI CCNNNNNNNGG 3 cut(s) 79, 227, 384
BsmAI GTCTC 3 cut(s) 1108, 1328, 1569
BsmFI GGGAC 8 cut(s) 19, 244, 432, 998, 1199, 1249, 1415, 1479
BsnI GGCC 8 cut(s) 83, 304, 381, 723, 1383, 1602, 1965, 1996
BsoBI CYCGRG 1 cut(s) 137
Bsp13I TCCGGA 2 cut(s) 220, 1771
Bsp1407I TGTACA 3 cut(s) 168, 550, 1053
Bsp1720I GCTNAGC 1 cut(s) 213
BspACI CCGC 7 cut(s) 54, 93, 724, 789, 1046, 1048, 1128
BspANI GGCC 8 cut(s) 83, 304, 381, 723, 1383, 1602, 1965, 1996
BspCNI CTCAG 6 cut(s) 500, 726, 1444, 1836, 1909, 2035
BspEI TCCGGA 2 cut(s) 220, 1771
BspFNI CGCG 1 cut(s) 1048
BspLI GGNNCC 5 cut(s) 376, 1393, 1494, 1495, 1770
BspPI GGATC 5 cut(s) 56, 465, 604, 1763, 1776
BspTI CTTAAG 1 cut(s) 1607
BsrDI GCAATG 2 cut(s) 233, 866
BsrFI RCCGGY 2 cut(s) 95, 1602
BsrGI TGTACA 3 cut(s) 168, 550, 1053
BsrI ACTGG 5 cut(s) 685, 802, 1038, 1425, 1576
BssAI RCCGGY 2 cut(s) 95, 1602
BssECI CCNNGG 4 cut(s) 979, 1046, 1489, 1507
BssNAI GTATAC 1 cut(s) 1723
BssSI CACGAG 2 cut(s) 861, 1470
BssT1I CCWWGG 1 cut(s) 1507
Bst1107I GTATAC 1 cut(s) 1723
Bst2BI CACGAG 2 cut(s) 861, 1470
Bst2UI CCWGG 2 cut(s) 980, 1010
Bst4CI ACNGT 7 cut(s) 125, 316, 358, 387, 951, 959, 1727
BstAFI CTTAAG 1 cut(s) 1607
BstAUI TGTACA 3 cut(s) 168, 550, 1053
BstC8I GCNNGC 3 cut(s) 97, 930, 1604
BstDEI CTNAG 9 cut(s) 213, 487, 713, 1140, 1286, 1452, 1823, 1896, 2043
BstDSI CCRYGG 1 cut(s) 1046
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 5 cut(s) 217, 339, 1009, 1780, 1882
BstFNI CGCG 1 cut(s) 1048
BstMAI GTCTC 3 cut(s) 1108, 1328, 1569
BstMCI CGRYCG 1 cut(s) 185
BstMWI GCNNNNNNNGC 7 cut(s) 193, 257, 470, 786, 1760, 1865, 2015
BstNI CCWGG 2 cut(s) 980, 1010
BstNSI RCATGY 1 cut(s) 2038
BstSCI CCNGG 3 cut(s) 978, 1008, 1488
BstSFI CTRYAG 4 cut(s) 121, 618, 734, 1755
BstUI CGCG 1 cut(s) 1048
BstV1I GCAGC 4 cut(s) 1000, 1415, 1551, 1780
BstV2I GAAGAC 1 cut(s) 1495
BstX2I RGATCY 4 cut(s) 173, 609, 1768, 1819
BstYI RGATCY 4 cut(s) 173, 609, 1768, 1819
BstZ17I GTATAC 1 cut(s) 1723
Bsu36I CCTNAGG 1 cut(s) 1286
BsuI GTATCC 1 cut(s) 390
BsuRI GGCC 8 cut(s) 83, 304, 381, 723, 1383, 1602, 1965, 1996
BtgI CCRYGG 1 cut(s) 1046
BtsCI GGATG 5 cut(s) 217, 339, 1009, 1780, 1882
BtsI GCAGTG 1 cut(s) 1770
BtsIMutI CAGTG 3 cut(s) 130, 1045, 1770
Cac8I GCNNGC 3 cut(s) 97, 930, 1604
Cfr10I RCCGGY 2 cut(s) 95, 1602
Cfr13I GGNCC 4 cut(s) 512, 721, 1456, 1493
Cfr42I CCGCGG 1 cut(s) 1049
CseI GACGC 1 cut(s) 2
Csp6I GTAC 9 cut(s) 131, 169, 291, 325, 551, 792, 952, 1054, 1813
CviAII CATG 9 cut(s) 461, 542, 827, 1276, 1341, 1354, 1385, 1873, 2035
CviQI GTAC 9 cut(s) 131, 169, 291, 325, 551, 792, 952, 1054, 1813
DdeI CTNAG 9 cut(s) 213, 487, 713, 1140, 1286, 1452, 1823, 1896, 2043
DraIII CACNNNGTG 1 cut(s) 1652
EaeI YGGCCR 1 cut(s) 1381
Eco130I CCWWGG 1 cut(s) 1507
Eco147I AGGCCT 1 cut(s) 1996
Eco47I GGWCC 3 cut(s) 512, 1456, 1493
Eco57I CTGAAG 2 cut(s) 62, 1821
Eco81I CCTNAGG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 137
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoO109I RGGNCCY 1 cut(s) 1493
EcoRI GAATTC 1 cut(s) 297
EcoRII CCWGG 2 cut(s) 978, 1008
EcoT14I CCWWGG 1 cut(s) 1507
ErhI CCWWGG 1 cut(s) 1507
FaeI CATG 9 cut(s) 464, 545, 830, 1279, 1344, 1357, 1388, 1876, 2038
FalI AAGNNNNNCTT 4 cut(s) 1619, 1651, 1997, 2029
FaqI GGGAC 8 cut(s) 19, 244, 432, 998, 1199, 1249, 1415, 1479
FatI CATG 9 cut(s) 460, 541, 826, 1275, 1340, 1353, 1384, 1872, 2034
FblI GTMKAC 2 cut(s) 733, 1722
Fnu4HI GCNGC 6 cut(s) 724, 1014, 1128, 1404, 1565, 1794
FokI GGATG 5 cut(s) 204, 346, 1016, 1787, 1889
Fsp4HI GCNGC 6 cut(s) 724, 1014, 1128, 1404, 1565, 1794
FspBI CTAG 3 cut(s) 572, 1748, 1955
GluI GCNGC 6 cut(s) 724, 1014, 1128, 1404, 1565, 1794
GsuI CTGGAG 3 cut(s) 702, 1593, 1617
HaeIII GGCC 8 cut(s) 83, 304, 381, 723, 1383, 1602, 1965, 1996
HapII CCGG 6 cut(s) 96, 221, 378, 1489, 1603, 1772
HgaI GACGC 1 cut(s) 2
Hin1II CATG 9 cut(s) 464, 545, 830, 1279, 1344, 1357, 1388, 1876, 2038
HincII GTYRAC 1 cut(s) 822
HindII GTYRAC 1 cut(s) 822
HindIII AAGCTT 2 cut(s) 595, 1217
HinfI GANTC 6 cut(s) 538, 577, 823, 855, 1102, 1230
HpaII CCGG 6 cut(s) 96, 221, 378, 1489, 1603, 1772
HphI GGTGA 6 cut(s) 82, 1167, 1248, 1379, 1664, 1739
Hpy166II GTNNAC 5 cut(s) 169, 293, 734, 822, 1723
Hpy188III TCNNGA 7 cut(s) 221, 362, 758, 1772, 1940, 1984, 1990
Hpy8I GTNNAC 5 cut(s) 169, 293, 734, 822, 1723
Hpy99I CGWCG 2 cut(s) 18, 62
HpyAV CCTTC 7 cut(s) 86, 109, 677, 1310, 1796, 1976, 1990
HpyCH4III ACNGT 7 cut(s) 125, 316, 358, 387, 951, 959, 1727
HpyCH4IV ACGT 1 cut(s) 253
HpyF10VI GCNNNNNNNGC 7 cut(s) 193, 257, 470, 786, 1760, 1865, 2015
HpyF3I CTNAG 9 cut(s) 213, 487, 713, 1140, 1286, 1452, 1823, 1896, 2043
HpySE526I ACGT 1 cut(s) 253
Hsp92II CATG 9 cut(s) 464, 545, 830, 1279, 1344, 1357, 1388, 1876, 2038
KflI GGGWCCC 1 cut(s) 1493
Kpn2I TCCGGA 2 cut(s) 220, 1771
KroI GCCGGC 2 cut(s) 95, 1602
KroNI GCCGGC 2 cut(s) 97, 1604
KspI CCGCGG 1 cut(s) 1049
LmnI GCTCC 1 cut(s) 407
Lsp1109I GCAGC 4 cut(s) 1000, 1415, 1551, 1780
LweI GCATC 4 cut(s) 226, 508, 1805, 1867
MaeI CTAG 3 cut(s) 572, 1748, 1955
MaeII ACGT 1 cut(s) 253
MaeIII GTNAC 5 cut(s) 144, 199, 1367, 1927, 2065
MboII GAAGA 6 cut(s) 773, 896, 1495, 1627, 1684, 1829
MfeI CAATTG 1 cut(s) 1829
MflI RGATCY 4 cut(s) 173, 609, 1768, 1819
MlsI TGGCCA 1 cut(s) 1383
MluNI TGGCCA 1 cut(s) 1383
MlyI GAGTC 1 cut(s) 817
MmeI TCCRAC 2 cut(s) 298, 2000
Mox20I TGGCCA 1 cut(s) 1383
MreI CGCCGGCG 1 cut(s) 95
MroI TCCGGA 2 cut(s) 220, 1771
MroNI GCCGGC 2 cut(s) 95, 1602
MroXI GAANNNNTTC 1 cut(s) 1634
MscI TGGCCA 1 cut(s) 1383
MseI TTAA 9 cut(s) 389, 593, 836, 1019, 1089, 1200, 1238, 1376, 1608
MslI CAYNNNNRTG 4 cut(s) 546, 921, 1180, 1352
Msp20I TGGCCA 1 cut(s) 1383
MspA1I CMGCKG 1 cut(s) 1048
MspCI CTTAAG 1 cut(s) 1607
MspI CCGG 6 cut(s) 96, 221, 378, 1489, 1603, 1772
MspR9I CCNGG 3 cut(s) 980, 1010, 1490
MunI CAATTG 1 cut(s) 1829
MvaI CCWGG 2 cut(s) 980, 1010
MvnI CGCG 1 cut(s) 1048
MwoI GCNNNNNNNGC 7 cut(s) 193, 257, 470, 786, 1760, 1865, 2015
NaeI GCCGGC 2 cut(s) 97, 1604
NciI CCSGG 1 cut(s) 1490
NgoMIV GCCGGC 2 cut(s) 95, 1602
NlaIII CATG 9 cut(s) 464, 545, 830, 1279, 1344, 1357, 1388, 1876, 2038
NlaIV GGNNCC 5 cut(s) 376, 1393, 1494, 1495, 1770
NmuCI GTSAC 3 cut(s) 1367, 1927, 2065
NspI RCATGY 1 cut(s) 2038
OliI CACNNNNGTG 1 cut(s) 1180
PceI AGGCCT 1 cut(s) 1996
PciI ACATGT 1 cut(s) 2034
PdiI GCCGGC 2 cut(s) 97, 1604
PdmI GAANNNNTTC 1 cut(s) 1634
PfeI GAWTC 5 cut(s) 538, 577, 855, 1102, 1230
PkrI GCNGC 6 cut(s) 725, 1015, 1129, 1405, 1566, 1795
Ple19I CGATCG 1 cut(s) 185
PleI GAGTC 1 cut(s) 817
PpsI GAGTC 1 cut(s) 817
PpuMI RGGWCCY 1 cut(s) 1493
PscI ACATGT 1 cut(s) 2034
PshBI ATTAAT 1 cut(s) 1376
Psp5II RGGWCCY 1 cut(s) 1493
Psp6I CCWGG 2 cut(s) 978, 1008
PspGI CCWGG 2 cut(s) 978, 1008
PspN4I GGNNCC 5 cut(s) 376, 1393, 1494, 1495, 1770
PspPI GGNCC 4 cut(s) 512, 721, 1456, 1493
PspPPI RGGWCCY 1 cut(s) 1493
PsuI RGATCY 4 cut(s) 173, 609, 1768, 1819
PvuI CGATCG 1 cut(s) 185
RsaI GTAC 9 cut(s) 132, 170, 292, 326, 552, 793, 953, 1055, 1814
RsaNI GTAC 9 cut(s) 131, 169, 291, 325, 551, 792, 952, 1054, 1813
RseI CAYNNNNRTG 4 cut(s) 546, 921, 1180, 1352
SacII CCGCGG 1 cut(s) 1049
SaqAI TTAA 9 cut(s) 389, 593, 836, 1019, 1089, 1200, 1238, 1376, 1608
SatI GCNGC 6 cut(s) 724, 1014, 1128, 1404, 1565, 1794
Sau96I GGNCC 4 cut(s) 512, 721, 1456, 1493
ScaI AGTACT 1 cut(s) 132
SchI GAGTC 1 cut(s) 817
ScrFI CCNGG 3 cut(s) 980, 1010, 1490
SfaNI GCATC 4 cut(s) 226, 508, 1805, 1867
SfcI CTRYAG 4 cut(s) 121, 618, 734, 1755
Sfr303I CCGCGG 1 cut(s) 1049
SgrAI CRCCGGYG 1 cut(s) 95
SgrBI CCGCGG 1 cut(s) 1049
SinI GGWCC 3 cut(s) 512, 1456, 1493
SmiMI CAYNNNNRTG 4 cut(s) 546, 921, 1180, 1352
SmlI CTYRAG 2 cut(s) 1607, 1998
SmoI CTYRAG 2 cut(s) 1607, 1998
SseBI AGGCCT 1 cut(s) 1996
SsiI CCGC 7 cut(s) 54, 93, 724, 789, 1046, 1048, 1128
SspMI CTAG 3 cut(s) 572, 1748, 1955
StuI AGGCCT 1 cut(s) 1996
StyD4I CCNGG 3 cut(s) 978, 1008, 1488
StyI CCWWGG 1 cut(s) 1507
TaaI ACNGT 7 cut(s) 125, 316, 358, 387, 951, 959, 1727
TaiI ACGT 1 cut(s) 256
TaqI TCGA 2 cut(s) 192, 1425
TaqII GACCGA 1 cut(s) 1373
TatI WGTACW 6 cut(s) 130, 168, 324, 550, 951, 1053
TauI GCSGC 2 cut(s) 726, 1130
TfiI GAWTC 5 cut(s) 538, 577, 855, 1102, 1230
Tru1I TTAA 9 cut(s) 389, 593, 836, 1019, 1089, 1200, 1238, 1376, 1608
Tru9I TTAA 9 cut(s) 389, 593, 836, 1019, 1089, 1200, 1238, 1376, 1608
TscAI CASTG 3 cut(s) 130, 1045, 1770
TseFI GTSAC 3 cut(s) 1367, 1927, 2065
TseI GCWGC 4 cut(s) 1013, 1403, 1564, 1793
Tsp45I GTSAC 3 cut(s) 1367, 1927, 2065
TspDTI ATGAA 9 cut(s) 259, 418, 472, 666, 865, 870, 1329, 1454, 1539
TspGWI ACGGA 3 cut(s) 357, 1141, 1223
TspRI CASTG 3 cut(s) 130, 1045, 1770
Vha464I CTTAAG 1 cut(s) 1607
VpaK11BI GGWCC 3 cut(s) 512, 1456, 1493
VspI ATTAAT 1 cut(s) 1376
XagI CCTNNNNNAGG 1 cut(s) 77
XapI RAATTY 2 cut(s) 297, 1913
XceI RCATGY 1 cut(s) 2038
XmiI GTMKAC 2 cut(s) 733, 1722
XmnI GAANNNNTTC 1 cut(s) 1634
XspI CTAG 3 cut(s) 572, 1748, 1955
ZrmI AGTACT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.