Rorug03G0063800

Starch binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002509
Physical Location & Seq
Forward (+)
4728337 .. 4731322
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0063800.1

Sequence Viewer

Length: 1182 bp
ATGACCACCACCGCCTATTCCCCACCTCCCTTTCAATTCCCGGTCCCCGATTTAATGGCCTCCGACTGCGCCCCCGACGACTCCTACTGTCCCTCCCCGGCCCAAAACCCGAATCCGACTCCTCTTCCCCCGGCCGAGCTCCTCAACCTCTCCTTCAACCAGGACCACGGCTGCTTCGCCGCCGGCACCGACCTCGGCTTCCGCATCTACAACTGCGACCCCTTCCGCGAGATCTTCCGCCGCGACTTCGGCCCACGCGGCGCCGTCGGATTGGTCCAGATGCTCTTCCGCTGCAACATCCTCACCGTCGTCGGCGGCGGCCCCGACCCCCTCTACTCCCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAGGTCAAAGCCGTCAAGCTCCGCCGCGACCGCATCGTCGTCGTTCTGGTCCAGAAGATCTTCGTCTACAATTTCGCCGATTTGAAGCTTCTCCACCAGATTGAGACCATCGCCAACCCCAAGGGACTCTGCGAGGTCTCGCACGTCGGGCCTCAGGCGGTGCTCGTCTGCCCGGGCCTCCAGAAAGGTCAAATTCGGGTCGAGCATTACGGGTCGAAGCGGACCAAGTTTATTATGGCCCACGATTCCAGGCTGGCCTGCTTCGCTCTCACGCAGGACGGGAGGTTGCTGGCCACGGCCAGCAGTAAGGGGACTTTGATCAGAGTTTTCAATACTCTGGATGGTTCATTGCTGCAAGAGGTAAGGAGAGGAGCAGATAGAGCAGAGATACATAGTCTTGCTTTCTCTGCTAATGCCCAATGGCTAGCTGTCTCGAGTGACAAGGGAACTATCCATGTTTTCAATCTGAAGGTTGATTCAGGATCCTTGGGGAATATCAGTCCATCAGAATCCAGTCCTCCTCATCCATCCGGCGTTTCATCTCTCTCTTTCATGAAAGGTGTTCTGCCAAGGTATTTCAGCTCAGAATGGTCAGTGGCTAAATTTCACTTGCACGAAGGTTTGGAGTACATTGTTGCCTTTGGCCACCAGAAGAACACTGTTGTGGTTCTAGGCATGGATGGAAGCTTCTATCGATGTGAATTTGACCCTGTCAATGGAGGAGAAATGACTCAGCTTGAATATTATAATTTCTTGAAGCCAGAAGAAACCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM_20

Protein Analysis

393

Amino Acids

43.48

Weight (kDa)

6.63

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PROPPIN PF21032 49 - 305 6.5e-34 PROPPIN
Beta-prop_THOC3 PF25174 115 - 292 2e-13 THOC3 beta-propeller domain
WD40_Prp19 PF24814 117 - 292 1.3e-07 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 144 - 320 1.2e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 149 - 293 7e-08 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 196 - 301 8.8e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 209 - 291 1.1e-07 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 210 - 294 7.3e-06 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 215 - 292 1.9e-07 WDR5 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1152
AasI GACNNNNNNGTC 1 cut(s) 440
AccB1I GGYRCC 2 cut(s) 185, 260
AccBSI CCGCTC 1 cut(s) 402
AccI GTMKAC 1 cut(s) 471
AccII CGCG 4 cut(s) 228, 243, 258, 432
AclWI GGATC 2 cut(s) 882, 895
AcoI YGGCCR 4 cut(s) 132, 696, 702, 1048
AcsI RAATTY 3 cut(s) 597, 1007, 1106
AcuI CTGAAG 1 cut(s) 893
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 1 cut(s) 1034
AfiI CCNNNNNNNGG 3 cut(s) 346, 406, 1121
AgsI TTSAA 7 cut(s) 35, 157, 490, 736, 868, 1145, 1162
AhdI GACNNNNNGTC 1 cut(s) 370
AjiI CACGTC 1 cut(s) 550
AjnI CCWGG 2 cut(s) 159, 653
AleI CACNNNNGTG 1 cut(s) 1067
AluBI AGCT 8 cut(s) 139, 391, 424, 493, 833, 987, 1092, 1141
AluI AGCT 8 cut(s) 139, 391, 424, 493, 833, 987, 1092, 1141
Alw21I GWGCWC 3 cut(s) 141, 393, 570
Alw26I GTCTC 3 cut(s) 503, 547, 841
AlwI GGATC 2 cut(s) 882, 895
Ama87I CYCGRG 2 cut(s) 577, 838
ApeKI GCWGC 4 cut(s) 171, 291, 378, 757
ApoI RAATTY 3 cut(s) 597, 1007, 1106
Asp700I GAANNNNTTC 1 cut(s) 464
AspLEI GCGC 2 cut(s) 71, 263
AsuC2I CCSGG 5 cut(s) 41, 98, 131, 578, 579
AsuHPI GGTGA 1 cut(s) 295
AsuNHI GCTAGC 1 cut(s) 829
AvaI CYCGRG 2 cut(s) 577, 838
AvaII GGWCC 5 cut(s) 43, 163, 274, 454, 627
AxyI CCTNAGG 1 cut(s) 558
BalI TGGCCA 2 cut(s) 698, 1050
BamHI GGATCC 1 cut(s) 887
BanI GGYRCC 2 cut(s) 185, 260
BanII GRGCYC 2 cut(s) 141, 393
Bbv12I GWGCWC 3 cut(s) 141, 393, 570
BbvI GCAGC 4 cut(s) 158, 278, 365, 744
BccI CCATC 5 cut(s) 521, 740, 916, 940, 1079
BceAI ACGGC 4 cut(s) 184, 248, 401, 717
BcgI CGANNNNNNTGC 4 cut(s) 175, 209, 427, 461
BciT130I CCWGG 2 cut(s) 161, 655
BclI TGATCA 1 cut(s) 723
BcnI CCSGG 5 cut(s) 41, 98, 131, 578, 579
BcoDI GTCTC 3 cut(s) 503, 547, 841
BfaI CTAG 2 cut(s) 830, 1076
BfoI RGCGCY 1 cut(s) 264
BglI GCCNNNNNGGC 1 cut(s) 258
BglII AGATCT 2 cut(s) 231, 462
Bme1390I CCNGG 7 cut(s) 41, 98, 131, 161, 578, 579, 655
Bme18I GGWCC 5 cut(s) 43, 163, 274, 454, 627
BmeRI GACNNNNNGTC 1 cut(s) 370
BmeT110I CYCGRG 2 cut(s) 577, 838
BmgBI CACGTC 1 cut(s) 550
BmiI GGNNCC 5 cut(s) 45, 187, 262, 322, 889
BmrFI CCNGG 7 cut(s) 41, 98, 131, 161, 578, 579, 655
BmsI GCATC 4 cut(s) 213, 270, 390, 447
BmtI GCTAGC 1 cut(s) 833
BpmI CTGGAG 1 cut(s) 569
BpuMI CCSGG 5 cut(s) 41, 98, 131, 578, 579
Bsa29I ATCGAT 1 cut(s) 1099
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 2 cut(s) 503, 547
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 3 cut(s) 346, 406, 1121
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 2 cut(s) 370, 918
Bse21I CCTNAGG 1 cut(s) 558
Bse3DI GCAATG 1 cut(s) 752
BseBI CCWGG 2 cut(s) 161, 655
BseCI ATCGAT 1 cut(s) 1099
BseGI GGATG 5 cut(s) 297, 751, 928, 932, 1090
BseLI CCNNNNNNNGG 3 cut(s) 346, 406, 1121
BseMI GCAATG 1 cut(s) 752
BseMII CTCAG 3 cut(s) 572, 1002, 1151
BseNI ACTGG 2 cut(s) 370, 918
BseRI GAGGAG 5 cut(s) 111, 131, 789, 915, 1140
BseX3I CGGCCG 1 cut(s) 132
BseXI GCAGC 4 cut(s) 158, 278, 365, 744
Bsh1236I CGCG 4 cut(s) 228, 243, 258, 432
Bsh1285I CGRYCG 2 cut(s) 135, 436
BshNI GGYRCC 2 cut(s) 185, 260
BshVI ATCGAT 1 cut(s) 1099
BsiEI CGRYCG 2 cut(s) 135, 436
BsiHKAI GWGCWC 3 cut(s) 141, 393, 570
BsiHKCI CYCGRG 2 cut(s) 577, 838
BsiSI CCGG 6 cut(s) 41, 98, 131, 183, 578, 936
BslFI GGGAC 6 cut(s) 29, 75, 358, 374, 543, 730
BslI CCNNNNNNNGG 3 cut(s) 346, 406, 1121
BsmAI GTCTC 3 cut(s) 503, 547, 841
BsmFI GGGAC 6 cut(s) 29, 75, 358, 374, 543, 730
Bso31I GGTCTC 2 cut(s) 503, 547
BsoBI CYCGRG 2 cut(s) 577, 838
Bsp1286I GDGCHC 3 cut(s) 141, 393, 570
Bsp143I GATC 5 cut(s) 231, 354, 462, 723, 887
BspCNI CTCAG 3 cut(s) 571, 1001, 1150
BspDI ATCGAT 1 cut(s) 1099
BspFNI CGCG 4 cut(s) 228, 243, 258, 432
BspHI TCATGA 2 cut(s) 351, 957
BspLI GGNNCC 5 cut(s) 45, 187, 262, 322, 889
BspOI GCTAGC 1 cut(s) 833
BspPI GGATC 2 cut(s) 882, 895
BspQI GCTCTTC 1 cut(s) 290
BspT107I GGYRCC 2 cut(s) 185, 260
BspTNI GGTCTC 2 cut(s) 503, 547
BsrBI CCGCTC 1 cut(s) 402
BsrDI GCAATG 1 cut(s) 752
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 2 cut(s) 370, 918
BssAI RCCGGY 1 cut(s) 182
BssMI GATC 5 cut(s) 231, 354, 462, 723, 887
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 3 cut(s) 525, 891, 974
Bst2UI CCWGG 2 cut(s) 161, 655
Bst4CI ACNGT 3 cut(s) 89, 307, 1066
Bst6I CTCTTC 2 cut(s) 129, 290
BstACI GRCGYC 1 cut(s) 261
BstC8I GCNNGC 7 cut(s) 184, 389, 660, 664, 696, 706, 831
BstDEI CTNAG 3 cut(s) 558, 988, 1137
BstDSI CCRYGG 2 cut(s) 166, 699
BstF5I GGATG 5 cut(s) 297, 751, 928, 932, 1090
BstFNI CGCG 4 cut(s) 228, 243, 258, 432
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 2 cut(s) 71, 263
BstKTI GATC 5 cut(s) 234, 357, 465, 726, 890
BstMAI GTCTC 3 cut(s) 503, 547, 841
BstMBI GATC 5 cut(s) 231, 354, 462, 723, 887
BstMCI CGRYCG 2 cut(s) 135, 436
BstMWI GCNNNNNNNGC 8 cut(s) 249, 258, 384, 435, 553, 668, 785, 812
BstNI CCWGG 2 cut(s) 161, 655
BstSCI CCNGG 7 cut(s) 39, 96, 129, 159, 576, 577, 653
BstUI CGCG 4 cut(s) 228, 243, 258, 432
BstV1I GCAGC 4 cut(s) 158, 278, 365, 744
BstX2I RGATCY 3 cut(s) 231, 462, 887
BstYI RGATCY 3 cut(s) 231, 462, 887
BstZI CGGCCG 1 cut(s) 132
Bsu15I ATCGAT 1 cut(s) 1099
Bsu36I CCTNAGG 1 cut(s) 558
BsuTUI ATCGAT 1 cut(s) 1099
BtgI CCRYGG 2 cut(s) 166, 699
BtgZI GCGATG 1 cut(s) 499
BtrI CACGTC 1 cut(s) 550
BtsCI GGATG 5 cut(s) 297, 751, 928, 932, 1090
BtsIMutI CAGTG 2 cut(s) 1005, 1062
Cac8I GCNNGC 7 cut(s) 184, 389, 660, 664, 696, 706, 831
CciI TCATGA 2 cut(s) 351, 957
CfoI GCGC 2 cut(s) 71, 263
Cfr10I RCCGGY 1 cut(s) 182
Cfr9I CCCGGG 1 cut(s) 577
ClaI ATCGAT 1 cut(s) 1099
Csp6I GTAC 1 cut(s) 1033
CviAII CATG 4 cut(s) 352, 860, 958, 1081
CviQI GTAC 1 cut(s) 1033
DdeI CTNAG 3 cut(s) 558, 988, 1137
DinI GGCGCC 1 cut(s) 262
DpnI GATC 5 cut(s) 233, 356, 464, 725, 889
DpnII GATC 5 cut(s) 231, 354, 462, 723, 887
DrdI GACNNNNNNGTC 1 cut(s) 440
DriI GACNNNNNGTC 1 cut(s) 370
DseDI GACNNNNNNGTC 1 cut(s) 440
EaeI YGGCCR 4 cut(s) 132, 696, 702, 1048
EagI CGGCCG 1 cut(s) 132
Eam1104I CTCTTC 2 cut(s) 129, 290
Eam1105I GACNNNNNGTC 1 cut(s) 370
EarI CTCTTC 2 cut(s) 129, 290
EciI GGCGGA 2 cut(s) 227, 416
Ecl136II GAGCTC 2 cut(s) 139, 391
EclXI CGGCCG 1 cut(s) 132
Eco130I CCWWGG 3 cut(s) 525, 891, 974
Eco24I GRGCYC 2 cut(s) 141, 393
Eco31I GGTCTC 2 cut(s) 503, 547
Eco47I GGWCC 5 cut(s) 43, 163, 274, 454, 627
Eco52I CGGCCG 1 cut(s) 132
Eco53kI GAGCTC 2 cut(s) 139, 391
Eco57I CTGAAG 1 cut(s) 893
Eco81I CCTNAGG 1 cut(s) 558
Eco88I CYCGRG 2 cut(s) 577, 838
EcoICRI GAGCTC 2 cut(s) 139, 391
EcoRII CCWGG 2 cut(s) 159, 653
EcoT14I CCWWGG 3 cut(s) 525, 891, 974
EcoT38I GRGCYC 2 cut(s) 141, 393
EgeI GGCGCC 1 cut(s) 262
EheI GGCGCC 1 cut(s) 262
ErhI CCWWGG 3 cut(s) 525, 891, 974
FaeI CATG 4 cut(s) 355, 863, 961, 1084
FaiI YATR 7 cut(s) 353, 641, 798, 861, 959, 1082, 1152
FaqI GGGAC 6 cut(s) 29, 75, 358, 374, 543, 730
FatI CATG 4 cut(s) 351, 859, 957, 1080
FauI CCCGC 1 cut(s) 383
FbaI TGATCA 1 cut(s) 723
FblI GTMKAC 1 cut(s) 471
FokI GGATG 5 cut(s) 284, 758, 915, 919, 1097
FriOI GRGCYC 2 cut(s) 141, 393
FspBI CTAG 2 cut(s) 830, 1076
GlaI GCGC 2 cut(s) 70, 262
GsuI CTGGAG 1 cut(s) 569
HaeII RGCGCY 1 cut(s) 264
HapII CCGG 6 cut(s) 41, 98, 131, 183, 578, 936
HhaI GCGC 2 cut(s) 71, 263
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 4 cut(s) 355, 863, 961, 1084
Hin6I GCGC 2 cut(s) 69, 261
HinP1I GCGC 2 cut(s) 69, 261
HindIII AAGCTT 2 cut(s) 491, 1090
HinfI GANTC 8 cut(s) 80, 112, 118, 531, 650, 881, 914, 1135
HpaII CCGG 6 cut(s) 41, 98, 131, 183, 578, 936
HphI GGTGA 1 cut(s) 295
Hpy166II GTNNAC 1 cut(s) 472
Hpy188I TCNGA 9 cut(s) 64, 117, 269, 406, 728, 873, 913, 991, 1181
Hpy188III TCNNGA 9 cut(s) 277, 352, 457, 586, 743, 838, 885, 958, 1159
Hpy8I GTNNAC 1 cut(s) 472
Hpy99I CGWCG 7 cut(s) 80, 269, 311, 314, 446, 449, 554
HpyAV CCTTC 5 cut(s) 163, 232, 406, 868, 1016
HpyCH4III ACNGT 3 cut(s) 89, 307, 1066
HpyCH4IV ACGT 1 cut(s) 549
HpyCH4V TGCA 4 cut(s) 294, 381, 760, 1018
HpyF10VI GCNNNNNNNGC 8 cut(s) 249, 258, 384, 435, 553, 668, 785, 812
HpyF3I CTNAG 3 cut(s) 558, 988, 1137
HpySE526I ACGT 1 cut(s) 549
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 4 cut(s) 355, 863, 961, 1084
HspAI GCGC 2 cut(s) 69, 261
KasI GGCGCC 1 cut(s) 260
KroI GCCGGC 1 cut(s) 182
KroNI GCCGGC 1 cut(s) 184
Ksp22I TGATCA 1 cut(s) 723
Kzo9I GATC 5 cut(s) 231, 354, 462, 723, 887
LguI GCTCTTC 1 cut(s) 290
LmnI GCTCC 4 cut(s) 144, 407, 429, 776
Lsp1109I GCAGC 4 cut(s) 158, 278, 365, 744
LweI GCATC 4 cut(s) 213, 270, 390, 447
MaeI CTAG 2 cut(s) 830, 1076
MaeII ACGT 1 cut(s) 549
MaeIII GTNAC 1 cut(s) 842
MalI GATC 5 cut(s) 233, 356, 464, 725, 889
MbiI CCGCTC 1 cut(s) 402
MboI GATC 5 cut(s) 231, 354, 462, 723, 887
MboII GAAGA 7 cut(s) 116, 226, 277, 457, 472, 1069, 1181
MflI RGATCY 3 cut(s) 231, 462, 887
MhlI GDGCHC 3 cut(s) 141, 393, 570
MlsI TGGCCA 2 cut(s) 698, 1050
MluCI AATT 6 cut(s) 35, 475, 597, 1007, 1106, 1153
MluNI TGGCCA 2 cut(s) 698, 1050
Mly113I GGCGCC 1 cut(s) 261
MlyI GAGTC 4 cut(s) 74, 112, 525, 1129
MmeI TCCRAC 3 cut(s) 87, 140, 247
Mox20I TGGCCA 2 cut(s) 698, 1050
MroNI GCCGGC 1 cut(s) 182
MroXI GAANNNNTTC 1 cut(s) 464
MscI TGGCCA 2 cut(s) 698, 1050
MseI TTAA 1 cut(s) 53
MslI CAYNNNNRTG 1 cut(s) 1067
Msp20I TGGCCA 2 cut(s) 698, 1050
MspA1I CMGCKG 2 cut(s) 291, 378
MspI CCGG 6 cut(s) 41, 98, 131, 183, 578, 936
MspR9I CCNGG 7 cut(s) 41, 98, 131, 161, 578, 579, 655
MvaI CCWGG 2 cut(s) 161, 655
MvnI CGCG 4 cut(s) 228, 243, 258, 432
MwoI GCNNNNNNNGC 8 cut(s) 249, 258, 384, 435, 553, 668, 785, 812
NaeI GCCGGC 1 cut(s) 184
NarI GGCGCC 1 cut(s) 261
NciI CCSGG 5 cut(s) 41, 98, 131, 578, 579
NdeII GATC 5 cut(s) 231, 354, 462, 723, 887
NgoMIV GCCGGC 1 cut(s) 182
NheI GCTAGC 1 cut(s) 829
NlaIII CATG 4 cut(s) 355, 863, 961, 1084
NlaIV GGNNCC 5 cut(s) 45, 187, 262, 322, 889
NmeAIII GCCGAG 2 cut(s) 160, 174
NmuCI GTSAC 1 cut(s) 842
OliI CACNNNNGTG 1 cut(s) 1067
PaeR7I CTCGAG 1 cut(s) 838
PagI TCATGA 2 cut(s) 351, 957
PciSI GCTCTTC 1 cut(s) 290
PdiI GCCGGC 1 cut(s) 184
PdmI GAANNNNTTC 1 cut(s) 464
PfeI GAWTC 4 cut(s) 112, 650, 881, 914
PflFI GACNNNGTC 1 cut(s) 1115
PleI GAGTC 4 cut(s) 74, 112, 525, 1129
PluTI GGCGCC 1 cut(s) 264
PpsI GAGTC 4 cut(s) 74, 112, 525, 1129
PsiI TTATAA 1 cut(s) 1152
Psp124BI GAGCTC 2 cut(s) 141, 393
Psp6I CCWGG 2 cut(s) 159, 653
PspGI CCWGG 2 cut(s) 159, 653
PspN4I GGNNCC 5 cut(s) 45, 187, 262, 322, 889
PsuI RGATCY 3 cut(s) 231, 462, 887
PsyI GACNNNGTC 1 cut(s) 1115
RsaI GTAC 1 cut(s) 1034
RsaNI GTAC 1 cut(s) 1033
RseI CAYNNNNRTG 1 cut(s) 1067
SacI GAGCTC 2 cut(s) 141, 393
SapI GCTCTTC 1 cut(s) 290
SaqAI TTAA 1 cut(s) 53
Sau3AI GATC 5 cut(s) 231, 354, 462, 723, 887
SchI GAGTC 4 cut(s) 74, 112, 525, 1129
ScrFI CCNGG 7 cut(s) 41, 98, 131, 161, 578, 579, 655
SduI GDGCHC 3 cut(s) 141, 393, 570
SfaNI GCATC 4 cut(s) 213, 270, 390, 447
SfoI GGCGCC 1 cut(s) 262
Sfr274I CTCGAG 1 cut(s) 838
SinI GGWCC 5 cut(s) 43, 163, 274, 454, 627
SlaI CTCGAG 1 cut(s) 838
SmaI CCCGGG 1 cut(s) 579
SmiMI CAYNNNNRTG 1 cut(s) 1067
SmlI CTYRAG 1 cut(s) 838
SmoI CTYRAG 1 cut(s) 838
SrfI GCCCGGGC 1 cut(s) 579
Sse9I AATT 6 cut(s) 35, 475, 597, 1007, 1106, 1153
SspDI GGCGCC 1 cut(s) 260
SspI AATATT 1 cut(s) 1148
SspMI CTAG 2 cut(s) 830, 1076
SstI GAGCTC 2 cut(s) 141, 393
StyD4I CCNGG 7 cut(s) 39, 96, 129, 159, 576, 577, 653
StyI CCWWGG 3 cut(s) 525, 891, 974
TaaI ACNGT 3 cut(s) 89, 307, 1066
TaiI ACGT 1 cut(s) 552
TaqI TCGA 4 cut(s) 606, 620, 839, 1099
TasI AATT 6 cut(s) 35, 475, 597, 1007, 1106, 1153
TatI WGTACW 1 cut(s) 1032
TauI GCSGC 6 cut(s) 182, 243, 261, 318, 321, 432
TfiI GAWTC 4 cut(s) 112, 650, 881, 914
Tru1I TTAA 1 cut(s) 53
Tru9I TTAA 1 cut(s) 53
TscAI CASTG 2 cut(s) 1005, 1069
TseFI GTSAC 1 cut(s) 842
TseI GCWGC 4 cut(s) 171, 291, 378, 757
Tsp45I GTSAC 1 cut(s) 842
TspDTI ATGAA 4 cut(s) 741, 933, 946, 974
TspMI CCCGGG 1 cut(s) 577
TspRI CASTG 2 cut(s) 1005, 1069
Tth111I GACNNNGTC 1 cut(s) 1115
VpaK11BI GGWCC 5 cut(s) 43, 163, 274, 454, 627
XapI RAATTY 3 cut(s) 597, 1007, 1106
XcmI CCANNNNNNNNNTGG 1 cut(s) 637
XhoI CTCGAG 1 cut(s) 838
XmaI CCCGGG 1 cut(s) 577
XmiI GTMKAC 1 cut(s) 471
XmnI GAANNNNTTC 1 cut(s) 464
XspI CTAG 2 cut(s) 830, 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.