Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003219

Physical Location & Seq

Genomic Coordinates Forward (+)

14407309 .. 14410384

Gene Structure 3076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0170600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGTGGCGGCAGAGTTTAGTTCTGGTGCTTTTGGCTCCACGGAAATGAGAAGCTTTGGGTTGCAAGTACTCCGTGGACGATGGTTCATGGTGTTTGCTTCAATGCTAATCCTCTCCGTGGCCGGAGCAACCTACATGTTTGGTCTCTACTCCACAGACGTCAAAACCTCTTTGGGCTATGACCAAACAACACTCAATCTCCTAAGCTTCTTCAAGGACTTGGGAGGCAATGTCGGAATCATAGCTGGTCTAGTTAACGAAGTCACAGCTCCATGGGTGGTGCTCTTAATCGGTTCAGTCATGAACTTTTTCGGTTACTTCATGATCTGGCTAGCTGTCACTGGTCGAACCTCGAAACCACGCGTGTGGCAGATGTGTTTGTACATTTGCATAGGTGCAAATTCTCAGACTTTCTCAAACACAGGAGCTGTGGTGAGCTGTGTGAAGAACTTTCCTTCTAGTAGAGGAAGTGTTTTGGGGCTTTTGAAGGGACTTGTTGGTTTGAGTGGTGCTATTATCACACAGCTCTACCGTGCTTTCTACGGACGTAACTCAAAGGCTTTGATTTTACTAATTGCTTGGCTTCCGGCTGCTGTTTCGATTGTGTTTCTTCCCATCATTCGTTTGATCAAGATCGTTAGACAGCCAAATGAGCTCAGGATTTTCTACAATCTTCTTTACATTACTCTCGGACTAGCTGGATTTCTCATGGCTTTGATTATCATGCAGCACAAGCTGAATTTTTCTAGAATTTGTTACATTGGAGGTGCTTCAGTTGTGCTTATACTACTCTTTCTTCCAATCGCGGTTGTTATAATCGAAGAATTCAAGCTCTGGAAGACGAAAATCAAAGCTGTGAATGAGCCAATTCAGCTCAAAGTAGTAGCTGAAAATCCAGCTCCTGCTGAATTAGTACCTGTTGCAACTCCACAAACCCAGCAGAAGCATAAATCTTGCTTGCAAACTGTCTTCAAGCCGCCCGTTAGAGGTGAGGATTACTCGATTTTGCAAGCACTTTTTAGCATTGACATGTTGATCTTGTTCGTTGCTACAATCTGTGGTGTTGGAGGTACCTTAACCGCGATTGATAATCTCGGTCAGATTGGGAACTCATTAGGCTACCCAACTGACAGCATTAGCACTTTCATATCTCTGGTAAGCATATGGAACTACCTTGGAAGAGTTACTTCTGGCTTTTCTTCAGAAGCCCTTTTGAAGAAGTACAAATTCCCAAGACCACTTATGCTCACTCTAGTGCTTCTCTTATCATGTGTTGGCCATCTCCTAATAGCGTTCGGGGTCCCCAACTCTCTCTACTTTTCTTCTGTGATTATTGGGTTCTGTTTTGGAGCTCAATGGCCATTGATTTTTGCCATCATTTCTGAACTCTTTGGCCTCAAGTACTATGCCACCTTAATCAATTTTGGTGGTGCTGCTAGCCCTATTGGGGCTTATATCCTCAATGTGAAAGTTGCCGGAAACTTGTATGATGCAGCGGCTTTGAAGCAACTAGAGACTTTGGGGAAGAATAGAGAAGCAGGACAAGACTTAACTTGTGTAGGAGTGGAATGTTACAAATTGGCTTTCATCATAATTGCTGCTGTGGCATTGTTTGGGAGCCTTGTTTCATTTATTTTGGTGATCAGAACAAGAAAATTCTACCAAAGTGATATTTACAAGAAGTTCAGAGAGGAAGCTGAGGCAGCAGAAGCAGATTTCGCTCTAGGTGTTGTTGGTGCCGATACTTCAAGCTCATCAAAAGCAGCACAAGGACCAGAGGCAGACTTGGAGTCAAAAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

600

Amino Acids

65.27

Weight (kDa)

9.24

Isoelectric Point (pI)

30.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	27 - 272	5.5e-88	Nodulin-like
NFD4_C	PF23262	339 - 554	1e-18	NFD4, C-terminal domain
MFS_1	PF07690	367 - 551	1.3e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41945 AT2G41945 AT2G41945
fragaria_vesca	FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750 FvH4_6g21750
malus_domestica	MD03G1221500.v1.1 MD11G1239000.v1.1
prunus_persica	Prupe.7G082900_v2.0.a1 Prupe.7G082900_v2.0.a1
pyrus_communis	pycom11g21050
rosa_chinensis	RchiOBHm_Chr3g0479091
rosa_laevigata	RLG00000023608
rosa_multiflora	Rmu_sc0005645.1_g000017 Rmu_sc0005992.1_g000001
rosa_roxburghii	Rroxscaffold_6G00402740
rosa_rugosa	Rorug03G0170500 Rorug03G0170600 Rorug03G0170700 Rorug03G0170700 Rorug03G0170800 Rorug03G0170900 Rorug03G0304400 Rorug03G0304500 Rorug03G0304600 Rorug03G0304700
rosa_samantha	Rh3AG221800 Rh3BG254300 Rh3DG246500 Rh4AG008600 Rh4CG009300 Rh4CG009700 Rh4CG009800
rosa_wichuraiana	Rw3G019910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	815
AatII	GACGTC	1 cut(s)	162
Acc65I	GGTACC	1 cut(s)	1070
AccB1I	GGYRCC	2 cut(s)	1070, 1736
AccII	CGCG	3 cut(s)	363, 806, 1082
AciI	CCGC	5 cut(s)	8, 806, 977, 1080, 1496
AcoI	YGGCCR	3 cut(s)	120, 1276, 1358
AcsI	RAATTY	6 cut(s)	400, 739, 750, 824, 1226, 1655
AcuI	CTGAAG	2 cut(s)	756, 1185
AcyI	GRCGYC	1 cut(s)	159
AfaI	GTAC	6 cut(s)	69, 383, 915, 1072, 1223, 1403
AfiI	CCNNNNNNNGG	3 cut(s)	118, 986, 1447
AflIII	ACRYGT	3 cut(s)	135, 361, 1029
AgsI	TTSAA	8 cut(s)	102, 214, 487, 829, 973, 1216, 1504, 1749
AhdI	GACNNNNNGTC	1 cut(s)	1789
AleI	CACNNNNGTG	2 cut(s)	364, 1253
Alw21I	GWGCWC	3 cut(s)	285, 657, 1354
Alw26I	GTCTC	2 cut(s)	149, 1508
AlwNI	CAGNNNCTG	2 cut(s)	428, 902
AoxI	GGCC	4 cut(s)	120, 1276, 1358, 1393
ApeKI	GCWGC	7 cut(s)	590, 727, 1433, 1493, 1598, 1703, 1763
ApoI	RAATTY	6 cut(s)	400, 739, 750, 824, 1226, 1655
Asp700I	GAANNNNTTC	1 cut(s)	308
Asp718I	GGTACC	1 cut(s)	1070
AspS9I	GGNCC	2 cut(s)	1300, 1772
AsuHPI	GGTGA	3 cut(s)	445, 1001, 1651
AsuNHI	GCTAGC	2 cut(s)	331, 1436
AvaII	GGWCC	2 cut(s)	1300, 1772
BalI	TGGCCA	2 cut(s)	1278, 1360
BanI	GGYRCC	2 cut(s)	1070, 1736
BanII	GRGCYC	2 cut(s)	657, 1354
BbsI	GAAGAC	2 cut(s)	845, 961
Bbv12I	GWGCWC	3 cut(s)	285, 657, 1354
BbvCI	CCTCAGC	1 cut(s)	1698
BbvI	GCAGC	7 cut(s)	577, 739, 1420, 1505, 1585, 1715, 1775
BccI	CCATC	4 cut(s)	75, 623, 1287, 1382
BclI	TGATCA	2 cut(s)	627, 1641
BcoDI	GTCTC	2 cut(s)	149, 1508
BfaI	CTAG	9 cut(s)	251, 332, 459, 695, 747, 1253, 1437, 1511, 1724
BmcAI	AGTACT	2 cut(s)	69, 1403
Bme18I	GGWCC	2 cut(s)	1300, 1772
BmeRI	GACNNNNNGTC	1 cut(s)	1789
BmgT120I	GGNCC	2 cut(s)	1300, 1772
BmiI	GGNNCC	6 cut(s)	37, 1072, 1301, 1302, 1619, 1738
BmsI	GCATC	1 cut(s)	1480
BmtI	GCTAGC	2 cut(s)	335, 1440
BpiI	GAAGAC	2 cut(s)	845, 961
BplI	GAGNNNNNCTC	2 cut(s)	983, 1015
Bpu10I	CCTNAGC	3 cut(s)	203, 656, 1698
BpuEI	CTTGAG	1 cut(s)	1382
BsaBI	GATNNNNATC	1 cut(s)	632
BsaHI	GRCGYC	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	149
BsaJI	CCNNGG	5 cut(s)	39, 73, 117, 272, 1174
BsaXI	ACNNNNNCTCC	6 cut(s)	183, 213, 216, 246, 417, 447
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 986, 1447
Bse1I	ACTGG	1 cut(s)	346
Bse3DI	GCAATG	1 cut(s)	235
Bse8I	GATNNNNATC	1 cut(s)	632
BseDI	CCNNGG	5 cut(s)	39, 73, 117, 272, 1174
BseJI	GATNNNNATC	1 cut(s)	632
BseLI	CCNNNNNNNGG	3 cut(s)	118, 986, 1447
BseMI	GCAATG	1 cut(s)	235
BseMII	CTCAG	3 cut(s)	419, 670, 1689
BseNI	ACTGG	1 cut(s)	346
BseXI	GCAGC	7 cut(s)	577, 739, 1420, 1505, 1585, 1715, 1775
BseYI	CCCAGC	1 cut(s)	936
Bsh1236I	CGCG	3 cut(s)	363, 806, 1082
BshFI	GGCC	4 cut(s)	122, 1278, 1360, 1395
BshNI	GGYRCC	2 cut(s)	1070, 1736
BsiHKAI	GWGCWC	3 cut(s)	285, 657, 1354
BsiSI	CCGG	3 cut(s)	123, 587, 1476
BslFI	GGGAC	2 cut(s)	504, 1286
BslI	CCNNNNNNNGG	3 cut(s)	118, 986, 1447
BsmAI	GTCTC	2 cut(s)	149, 1508
BsmFI	GGGAC	2 cut(s)	504, 1286
BsnI	GGCC	4 cut(s)	122, 1278, 1360, 1395
Bso31I	GGTCTC	1 cut(s)	149
Bsp1286I	GDGCHC	3 cut(s)	285, 657, 1354
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	5 cut(s)	324, 627, 633, 1035, 1641
Bsp19I	CCATGG	1 cut(s)	272
BspACI	CCGC	5 cut(s)	8, 806, 977, 1080, 1496
BspANI	GGCC	4 cut(s)	122, 1278, 1360, 1395
BspCNI	CTCAG	3 cut(s)	418, 669, 1690
BspFNI	CGCG	3 cut(s)	363, 806, 1082
BspHI	TCATGA	2 cut(s)	300, 321
BspLI	GGNNCC	6 cut(s)	37, 1072, 1301, 1302, 1619, 1738
BspOI	GCTAGC	2 cut(s)	335, 1440
BspT107I	GGYRCC	2 cut(s)	1070, 1736
BspTNI	GGTCTC	1 cut(s)	149
BsrDI	GCAATG	1 cut(s)	235
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	1 cut(s)	346
BssECI	CCNNGG	5 cut(s)	39, 73, 117, 272, 1174
BssMI	GATC	5 cut(s)	324, 627, 633, 1035, 1641
BssNI	GRCGYC	1 cut(s)	159
BssT1I	CCWWGG	2 cut(s)	272, 1174
Bst4CI	ACNGT	2 cut(s)	533, 967
Bst6I	CTCTTC	1 cut(s)	1174
BstACI	GRCGYC	1 cut(s)	159
BstAUI	TGTACA	1 cut(s)	381
BstC8I	GCNNGC	4 cut(s)	333, 959, 1011, 1438
BstDEI	CTNAG	4 cut(s)	203, 405, 656, 1698
BstDSI	CCRYGG	4 cut(s)	39, 73, 117, 272
BstFNI	CGCG	3 cut(s)	363, 806, 1082
BstKTI	GATC	5 cut(s)	327, 630, 636, 1038, 1644
BstMAI	GTCTC	2 cut(s)	149, 1508
BstMBI	GATC	5 cut(s)	324, 627, 633, 1035, 1641
BstMWI	GCNNNNNNNGC	7 cut(s)	652, 733, 871, 1604, 1703, 1709, 1718
BstNSI	RCATGY	2 cut(s)	139, 1033
BstUI	CGCG	3 cut(s)	363, 806, 1082
BstV1I	GCAGC	7 cut(s)	577, 739, 1420, 1505, 1585, 1715, 1775
BstV2I	GAAGAC	2 cut(s)	845, 961
BstXI	CCANNNNNNTGG	1 cut(s)	366
BsuRI	GGCC	4 cut(s)	122, 1278, 1360, 1395
BtgI	CCRYGG	4 cut(s)	39, 73, 117, 272
BtsIMutI	CAGTG	1 cut(s)	339
Cac8I	GCNNGC	4 cut(s)	333, 959, 1011, 1438
CaiI	CAGNNNCTG	2 cut(s)	428, 902
CciI	TCATGA	2 cut(s)	300, 321
Cfr13I	GGNCC	2 cut(s)	1300, 1772
Csp6I	GTAC	6 cut(s)	68, 382, 914, 1071, 1222, 1402
CspCI	CAANNNNNGTGG	2 cut(s)	1408, 1443
CviAII	CATG	9 cut(s)	88, 136, 273, 301, 322, 709, 724, 1030, 1269
CviQI	GTAC	6 cut(s)	68, 382, 914, 1071, 1222, 1402
DdeI	CTNAG	4 cut(s)	203, 405, 656, 1698
DpnI	GATC	5 cut(s)	326, 629, 635, 1037, 1643
DpnII	GATC	5 cut(s)	324, 627, 633, 1035, 1641
DriI	GACNNNNNGTC	1 cut(s)	1789
EaeI	YGGCCR	3 cut(s)	120, 1276, 1358
Eam1104I	CTCTTC	1 cut(s)	1174
Eam1105I	GACNNNNNGTC	1 cut(s)	1789
EarI	CTCTTC	1 cut(s)	1174
Ecl136II	GAGCTC	2 cut(s)	655, 1352
Eco130I	CCWWGG	2 cut(s)	272, 1174
Eco24I	GRGCYC	2 cut(s)	657, 1354
Eco31I	GGTCTC	1 cut(s)	149
Eco47I	GGWCC	2 cut(s)	1300, 1772
Eco53kI	GAGCTC	2 cut(s)	655, 1352
Eco57I	CTGAAG	2 cut(s)	756, 1185
EcoICRI	GAGCTC	2 cut(s)	655, 1352
EcoO109I	RGGNCCY	1 cut(s)	1300
EcoRI	GAATTC	1 cut(s)	824
EcoT14I	CCWWGG	2 cut(s)	272, 1174
EcoT38I	GRGCYC	2 cut(s)	657, 1354
ErhI	CCWWGG	2 cut(s)	272, 1174
FaeI	CATG	9 cut(s)	91, 139, 276, 304, 325, 712, 727, 1033, 1272
FalI	AAGNNNNNCTT	2 cut(s)	1171, 1203
FaqI	GGGAC	2 cut(s)	504, 1286
FatI	CATG	9 cut(s)	87, 135, 272, 300, 321, 708, 723, 1029, 1268
FauNDI	CATATG	1 cut(s)	1163
FbaI	TGATCA	2 cut(s)	627, 1641
FriOI	GRGCYC	2 cut(s)	657, 1354
FspBI	CTAG	9 cut(s)	251, 332, 459, 695, 747, 1253, 1437, 1511, 1724
GsaI	CCCAGC	1 cut(s)	940
HaeIII	GGCC	4 cut(s)	122, 1278, 1360, 1395
HapII	CCGG	3 cut(s)	123, 587, 1476
Hin1I	GRCGYC	1 cut(s)	159
Hin1II	CATG	9 cut(s)	91, 139, 276, 304, 325, 712, 727, 1033, 1272
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HindIII	AAGCTT	2 cut(s)	52, 205
HinfI	GANTC	2 cut(s)	237, 1790
HpaI	GTTAAC	1 cut(s)	256
HpaII	CCGG	3 cut(s)	123, 587, 1476
HphI	GGTGA	3 cut(s)	445, 1001, 1651
Hpy166II	GTNNAC	2 cut(s)	77, 256
Hpy188I	TCNGA	8 cut(s)	236, 408, 692, 1101, 1204, 1384, 1646, 1688
Hpy188III	TCNNGA	6 cut(s)	301, 322, 631, 658, 747, 835
Hpy8I	GTNNAC	2 cut(s)	77, 256
HpyAV	CCTTC	2 cut(s)	465, 481
HpyCH4III	ACNGT	2 cut(s)	533, 967
HpyCH4IV	ACGT	2 cut(s)	159, 547
HpyCH4V	TGCA	8 cut(s)	64, 390, 398, 727, 923, 961, 1009, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	652, 733, 871, 1604, 1703, 1709, 1718
HpyF3I	CTNAG	4 cut(s)	203, 405, 656, 1698
HpySE526I	ACGT	2 cut(s)	159, 547
Hsp92I	GRCGYC	1 cut(s)	159
Hsp92II	CATG	9 cut(s)	91, 139, 276, 304, 325, 712, 727, 1033, 1272
KflI	GGGWCCC	1 cut(s)	1300
KpnI	GGTACC	1 cut(s)	1074
Ksp22I	TGATCA	2 cut(s)	627, 1641
KspAI	GTTAAC	1 cut(s)	256
Kzo9I	GATC	5 cut(s)	324, 627, 633, 1035, 1641
LmnI	GCTCC	7 cut(s)	41, 125, 274, 425, 904, 1349, 1617
Lsp1109I	GCAGC	7 cut(s)	577, 739, 1420, 1505, 1585, 1715, 1775
LweI	GCATC	1 cut(s)	1480
MaeI	CTAG	9 cut(s)	251, 332, 459, 695, 747, 1253, 1437, 1511, 1724
MaeII	ACGT	2 cut(s)	159, 547
MaeIII	GTNAC	7 cut(s)	262, 314, 337, 548, 755, 1183, 1571
MalI	GATC	5 cut(s)	326, 629, 635, 1037, 1643
MboI	GATC	5 cut(s)	324, 627, 633, 1035, 1641
MhlI	GDGCHC	3 cut(s)	285, 657, 1354
MlsI	TGGCCA	2 cut(s)	1278, 1360
MluI	ACGCGT	1 cut(s)	361
MluNI	TGGCCA	2 cut(s)	1278, 1360
MlyI	GAGTC	1 cut(s)	1799
MmeI	TCCRAC	2 cut(s)	214, 1045
Mox20I	TGGCCA	2 cut(s)	1278, 1360
MroXI	GAANNNNTTC	1 cut(s)	308
MscI	TGGCCA	2 cut(s)	1278, 1360
MseI	TTAA	5 cut(s)	255, 287, 1076, 1415, 1550
MslI	CAYNNNNRTG	4 cut(s)	44, 364, 1028, 1253
Msp20I	TGGCCA	2 cut(s)	1278, 1360
MspA1I	CMGCKG	1 cut(s)	1496
MspI	CCGG	3 cut(s)	123, 587, 1476
MvnI	CGCG	3 cut(s)	363, 806, 1082
MwoI	GCNNNNNNNGC	7 cut(s)	652, 733, 871, 1604, 1703, 1709, 1718
NcoI	CCATGG	1 cut(s)	272
NdeI	CATATG	1 cut(s)	1163
NdeII	GATC	5 cut(s)	324, 627, 633, 1035, 1641
NheI	GCTAGC	2 cut(s)	331, 1436
NlaIII	CATG	9 cut(s)	91, 139, 276, 304, 325, 712, 727, 1033, 1272
NlaIV	GGNNCC	6 cut(s)	37, 1072, 1301, 1302, 1619, 1738
NmuCI	GTSAC	2 cut(s)	262, 337
NspI	RCATGY	2 cut(s)	139, 1033
OliI	CACNNNNGTG	2 cut(s)	364, 1253
PagI	TCATGA	2 cut(s)	300, 321
PciI	ACATGT	2 cut(s)	135, 1029
PdmI	GAANNNNTTC	1 cut(s)	308
PfeI	GAWTC	1 cut(s)	237
PleI	GAGTC	1 cut(s)	1798
PpsI	GAGTC	1 cut(s)	1798
PpuMI	RGGWCCY	1 cut(s)	1300
PscI	ACATGT	2 cut(s)	135, 1029
PsiI	TTATAA	1 cut(s)	815
Psp124BI	GAGCTC	2 cut(s)	657, 1354
Psp5II	RGGWCCY	1 cut(s)	1300
PspFI	CCCAGC	1 cut(s)	936
PspN4I	GGNNCC	6 cut(s)	37, 1072, 1301, 1302, 1619, 1738
PspPI	GGNCC	2 cut(s)	1300, 1772
PspPPI	RGGWCCY	1 cut(s)	1300
PstNI	CAGNNNCTG	2 cut(s)	428, 902
RsaI	GTAC	6 cut(s)	69, 383, 915, 1072, 1223, 1403
RsaNI	GTAC	6 cut(s)	68, 382, 914, 1071, 1222, 1402
RseI	CAYNNNNRTG	4 cut(s)	44, 364, 1028, 1253
SacI	GAGCTC	2 cut(s)	657, 1354
SaqAI	TTAA	5 cut(s)	255, 287, 1076, 1415, 1550
Sau3AI	GATC	5 cut(s)	324, 627, 633, 1035, 1641
Sau96I	GGNCC	2 cut(s)	1300, 1772
ScaI	AGTACT	2 cut(s)	69, 1403
SchI	GAGTC	1 cut(s)	1799
SduI	GDGCHC	3 cut(s)	285, 657, 1354
SfaNI	GCATC	1 cut(s)	1480
SinI	GGWCC	2 cut(s)	1300, 1772
SmiMI	CAYNNNNRTG	4 cut(s)	44, 364, 1028, 1253
SmlI	CTYRAG	1 cut(s)	1397
SmoI	CTYRAG	1 cut(s)	1397
SsiI	CCGC	5 cut(s)	8, 806, 977, 1080, 1496
SspMI	CTAG	9 cut(s)	251, 332, 459, 695, 747, 1253, 1437, 1511, 1724
SstI	GAGCTC	2 cut(s)	657, 1354
StyI	CCWWGG	2 cut(s)	272, 1174
TaaI	ACNGT	2 cut(s)	533, 967
TaiI	ACGT	2 cut(s)	162, 550
TaqI	TCGA	5 cut(s)	346, 353, 599, 819, 1001
TaqII	GACCGA	1 cut(s)	1085
TatI	WGTACW	4 cut(s)	67, 381, 1221, 1401
TauI	GCSGC	3 cut(s)	11, 979, 1499
TfiI	GAWTC	1 cut(s)	237
Tru1I	TTAA	5 cut(s)	255, 287, 1076, 1415, 1550
Tru9I	TTAA	5 cut(s)	255, 287, 1076, 1415, 1550
TscAI	CASTG	1 cut(s)	346
TseFI	GTSAC	2 cut(s)	262, 337
TseI	GCWGC	7 cut(s)	590, 727, 1433, 1493, 1598, 1703, 1763
Tsp45I	GTSAC	2 cut(s)	262, 337
TspDTI	ATGAA	6 cut(s)	76, 310, 317, 1135, 1576, 1617
TspGWI	ACGGA	4 cut(s)	56, 62, 106, 558
TspRI	CASTG	1 cut(s)	346
VpaK11BI	GGWCC	2 cut(s)	1300, 1772
XapI	RAATTY	6 cut(s)	400, 739, 750, 824, 1226, 1655
XbaI	TCTAGA	1 cut(s)	746
XceI	RCATGY	2 cut(s)	139, 1033
XmnI	GAANNNNTTC	1 cut(s)	308
XspI	CTAG	9 cut(s)	251, 332, 459, 695, 747, 1253, 1437, 1511, 1724
ZraI	GACGTC	1 cut(s)	160
ZrmI	AGTACT	2 cut(s)	69, 1403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.